0.026596
0.000000
0.003833
0.000000
0.015773
0.000000
0.000000
0.000000
0.011201
0.00000
0.00000
0.00000
EIGHT ATOMS HAVE BEEN ASSIGNED ZERO OCCUPANCY IN THE FINAL MODEL. THEY ARE ATOMS CG, CD, OE1, AND OE2 OF RESIDUE GLU B 1 AND ATOMS CG, CD, OE1, AND NE2 OF RESIDUE GLN C 3.
RESIDUES 8 AND 95 IN CHAINS A AND C ARE CIS PROLINES.
Eigenbrot, C.
Randal, M.
Kossiakoff, A.A.
Presta, L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
98.20
90.00
37.600
63.400
90.200
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
229
969
995
10.1006/jmbi.1993.1099
8095303
X-ray structures of the antigen-binding domains from three variants of humanized anti-p185HER2 antibody 4D5 and comparison with molecular modeling.
1993
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
89
4285
Humanization of an Anti-P185-Her2 Antibody for Human Cancer Therapy
1992
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
11964.308
IGG1-KAPPA 4D5 FV (LIGHT CHAIN)
2
man
polymer
13176.638
IGG1-KAPPA 4D5 FV (HEAVY CHAIN)
2
man
polymer
18.015
water
126
nat
water
no
no
DIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQP
EDFATYYCQQHYTTPPTFGQGTKVEIKRT
DIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQP
EDFATYYCQQHYTTPPTFGQGTKVEIKRT
A,C
polypeptide(L)
no
no
EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAY
LQMNSLRAEDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSS
EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAY
LQMNSLRAEDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSS
B,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
9606
Homo sapiens
562
Escherichia coli
human
sample
9606
Homo sapiens
562
Escherichia coli
2.12
41.86
pdbx_database_status
pdbx_unobs_or_zero_occ_atoms
struct_conf
struct_conf_type
repository
Initial release
Version format compliance
Version format compliance
Advisory
Derived calculations
Other
1
0
1993-10-31
1
1
2008-03-24
1
2
2011-07-13
1
3
2017-11-29
_pdbx_database_status.process_site
Y
BNL
1992-10-20
REL
REL
HOH
water
THE RESIDUE NUMBERING IS SEQUENTIAL WITHIN EACH CHAIN. THE
SEQUENTIAL NUMBERING OF THE LIGHT CHAIN CORRESPONDS TO THE
KABAT NUMBERING SCHEME. THE FOLLOWING IS THE RELATIONSHIP
OF THE SEQUENTIAL NUMBERING SCHEME OF THE HEAVY CHAIN TO
THE KABAT NUMBERING SCHEME:
ENTRY KABAT
1-52 1-52
53 52A
54-83 53-82
84-86 82A,82B,82C
87-104 83-100
105-107 100A,100B,100C
108-120 101-113
HOH
3
3
HOH
HOH
110
A
HOH
4
3
HOH
HOH
111
A
HOH
6
3
HOH
HOH
112
A
HOH
7
3
HOH
HOH
113
A
HOH
16
3
HOH
HOH
114
A
HOH
26
3
HOH
HOH
115
A
HOH
31
3
HOH
HOH
116
A
HOH
34
3
HOH
HOH
117
A
HOH
35
3
HOH
HOH
118
A
HOH
52
3
HOH
HOH
119
A
HOH
55
3
HOH
HOH
120
A
HOH
59
3
HOH
HOH
121
A
HOH
90
3
HOH
HOH
122
A
HOH
91
3
HOH
HOH
123
A
HOH
92
3
HOH
HOH
124
A
HOH
94
3
HOH
HOH
125
A
HOH
95
3
HOH
HOH
126
A
HOH
96
3
HOH
HOH
127
A
HOH
99
3
HOH
HOH
128
A
HOH
101
3
HOH
HOH
129
A
HOH
105
3
HOH
HOH
130
A
HOH
109
3
HOH
HOH
131
A
HOH
112
3
HOH
HOH
132
A
HOH
113
3
HOH
HOH
133
A
HOH
115
3
HOH
HOH
134
A
HOH
118
3
HOH
HOH
135
A
HOH
131
3
HOH
HOH
136
A
HOH
136
3
HOH
HOH
137
A
HOH
145
3
HOH
HOH
138
A
HOH
162
3
HOH
HOH
139
A
HOH
164
3
HOH
HOH
140
A
HOH
169
3
HOH
HOH
141
A
HOH
181
3
HOH
HOH
142
A
HOH
210
3
HOH
HOH
143
A
HOH
211
3
HOH
HOH
144
A
HOH
219
3
HOH
HOH
145
A
HOH
224
3
HOH
HOH
146
A
HOH
229
3
HOH
HOH
147
A
HOH
230
3
HOH
HOH
148
A
HOH
233
3
HOH
HOH
149
A
HOH
235
3
HOH
HOH
150
A
HOH
240
3
HOH
HOH
151
A
HOH
255
3
HOH
HOH
152
A
HOH
257
3
HOH
HOH
153
A
HOH
263
3
HOH
HOH
154
A
HOH
272
3
HOH
HOH
155
A
HOH
273
3
HOH
HOH
156
A
HOH
11
3
HOH
HOH
121
B
HOH
17
3
HOH
HOH
122
B
HOH
23
3
HOH
HOH
123
B
HOH
28
3
HOH
HOH
124
B
HOH
60
3
HOH
HOH
125
B
HOH
104
3
HOH
HOH
126
B
HOH
110
3
HOH
HOH
127
B
HOH
117
3
HOH
HOH
128
B
HOH
121
3
HOH
HOH
129
B
HOH
122
3
HOH
HOH
130
B
HOH
146
3
HOH
HOH
131
B
HOH
148
3
HOH
HOH
132
B
HOH
183
3
HOH
HOH
133
B
HOH
188
3
HOH
HOH
134
B
HOH
193
3
HOH
HOH
135
B
HOH
201
3
HOH
HOH
136
B
HOH
214
3
HOH
HOH
137
B
HOH
222
3
HOH
HOH
138
B
HOH
228
3
HOH
HOH
139
B
HOH
232
3
HOH
HOH
140
B
HOH
236
3
HOH
HOH
141
B
HOH
269
3
HOH
HOH
142
B
HOH
270
3
HOH
HOH
143
B
HOH
1
3
HOH
HOH
110
C
HOH
2
3
HOH
HOH
111
C
HOH
13
3
HOH
HOH
112
C
HOH
15
3
HOH
HOH
113
C
HOH
22
3
HOH
HOH
114
C
HOH
29
3
HOH
HOH
115
C
HOH
32
3
HOH
HOH
116
C
HOH
40
3
HOH
HOH
117
C
HOH
54
3
HOH
HOH
118
C
HOH
56
3
HOH
HOH
119
C
HOH
57
3
HOH
HOH
120
C
HOH
61
3
HOH
HOH
121
C
HOH
98
3
HOH
HOH
122
C
HOH
100
3
HOH
HOH
123
C
HOH
114
3
HOH
HOH
124
C
HOH
132
3
HOH
HOH
125
C
HOH
138
3
HOH
HOH
126
C
HOH
139
3
HOH
HOH
127
C
HOH
140
3
HOH
HOH
128
C
HOH
161
3
HOH
HOH
129
C
HOH
166
3
HOH
HOH
130
C
HOH
173
3
HOH
HOH
131
C
HOH
182
3
HOH
HOH
132
C
HOH
192
3
HOH
HOH
133
C
HOH
213
3
HOH
HOH
134
C
HOH
216
3
HOH
HOH
135
C
HOH
227
3
HOH
HOH
136
C
HOH
239
3
HOH
HOH
137
C
HOH
251
3
HOH
HOH
138
C
HOH
252
3
HOH
HOH
139
C
HOH
256
3
HOH
HOH
140
C
HOH
9
3
HOH
HOH
121
D
HOH
20
3
HOH
HOH
122
D
HOH
41
3
HOH
HOH
123
D
HOH
51
3
HOH
HOH
124
D
HOH
65
3
HOH
HOH
125
D
HOH
71
3
HOH
HOH
126
D
HOH
81
3
HOH
HOH
127
D
HOH
106
3
HOH
HOH
128
D
HOH
111
3
HOH
HOH
129
D
HOH
130
3
HOH
HOH
130
D
HOH
133
3
HOH
HOH
131
D
HOH
134
3
HOH
HOH
132
D
HOH
143
3
HOH
HOH
133
D
HOH
147
3
HOH
HOH
134
D
HOH
160
3
HOH
HOH
135
D
HOH
184
3
HOH
HOH
136
D
HOH
198
3
HOH
HOH
137
D
HOH
217
3
HOH
HOH
138
D
HOH
218
3
HOH
HOH
139
D
HOH
221
3
HOH
HOH
140
D
HOH
250
3
HOH
HOH
141
D
HOH
253
3
HOH
HOH
142
D
HOH
254
3
HOH
HOH
143
D
HOH
264
3
HOH
HOH
144
D
HOH
268
3
HOH
HOH
145
D
ASP
1
n
1
ASP
1
A
ILE
2
n
2
ILE
2
A
GLN
3
n
3
GLN
3
A
MET
4
n
4
MET
4
A
THR
5
n
5
THR
5
A
GLN
6
n
6
GLN
6
A
SER
7
n
7
SER
7
A
PRO
8
n
8
PRO
8
A
SER
9
n
9
SER
9
A
SER
10
n
10
SER
10
A
LEU
11
n
11
LEU
11
A
SER
12
n
12
SER
12
A
ALA
13
n
13
ALA
13
A
SER
14
n
14
SER
14
A
VAL
15
n
15
VAL
15
A
GLY
16
n
16
GLY
16
A
ASP
17
n
17
ASP
17
A
ARG
18
n
18
ARG
18
A
VAL
19
n
19
VAL
19
A
THR
20
n
20
THR
20
A
ILE
21
n
21
ILE
21
A
THR
22
n
22
THR
22
A
CYS
23
n
23
CYS
23
A
ARG
24
n
24
ARG
24
A
ALA
25
n
25
ALA
25
A
SER
26
n
26
SER
26
A
GLN
27
n
27
GLN
27
A
ASP
28
n
28
ASP
28
A
VAL
29
n
29
VAL
29
A
ASN
30
n
30
ASN
30
A
THR
31
n
31
THR
31
A
ALA
32
n
32
ALA
32
A
VAL
33
n
33
VAL
33
A
ALA
34
n
34
ALA
34
A
TRP
35
n
35
TRP
35
A
TYR
36
n
36
TYR
36
A
GLN
37
n
37
GLN
37
A
GLN
38
n
38
GLN
38
A
LYS
39
n
39
LYS
39
A
PRO
40
n
40
PRO
40
A
GLY
41
n
41
GLY
41
A
LYS
42
n
42
LYS
42
A
ALA
43
n
43
ALA
43
A
PRO
44
n
44
PRO
44
A
LYS
45
n
45
LYS
45
A
LEU
46
n
46
LEU
46
A
LEU
47
n
47
LEU
47
A
ILE
48
n
48
ILE
48
A
TYR
49
n
49
TYR
49
A
SER
50
n
50
SER
50
A
ALA
51
n
51
ALA
51
A
SER
52
n
52
SER
52
A
PHE
53
n
53
PHE
53
A
LEU
54
n
54
LEU
54
A
TYR
55
n
55
TYR
55
A
SER
56
n
56
SER
56
A
GLY
57
n
57
GLY
57
A
VAL
58
n
58
VAL
58
A
PRO
59
n
59
PRO
59
A
SER
60
n
60
SER
60
A
ARG
61
n
61
ARG
61
A
PHE
62
n
62
PHE
62
A
SER
63
n
63
SER
63
A
GLY
64
n
64
GLY
64
A
SER
65
n
65
SER
65
A
ARG
66
n
66
ARG
66
A
SER
67
n
67
SER
67
A
GLY
68
n
68
GLY
68
A
THR
69
n
69
THR
69
A
ASP
70
n
70
ASP
70
A
PHE
71
n
71
PHE
71
A
THR
72
n
72
THR
72
A
LEU
73
n
73
LEU
73
A
THR
74
n
74
THR
74
A
ILE
75
n
75
ILE
75
A
SER
76
n
76
SER
76
A
SER
77
n
77
SER
77
A
LEU
78
n
78
LEU
78
A
GLN
79
n
79
GLN
79
A
PRO
80
n
80
PRO
80
A
GLU
81
n
81
GLU
81
A
ASP
82
n
82
ASP
82
A
PHE
83
n
83
PHE
83
A
ALA
84
n
84
ALA
84
A
THR
85
n
85
THR
85
A
TYR
86
n
86
TYR
86
A
TYR
87
n
87
TYR
87
A
CYS
88
n
88
CYS
88
A
GLN
89
n
89
GLN
89
A
GLN
90
n
90
GLN
90
A
HIS
91
n
91
HIS
91
A
TYR
92
n
92
TYR
92
A
THR
93
n
93
THR
93
A
THR
94
n
94
THR
94
A
PRO
95
n
95
PRO
95
A
PRO
96
n
96
PRO
96
A
THR
97
n
97
THR
97
A
PHE
98
n
98
PHE
98
A
GLY
99
n
99
GLY
99
A
GLN
100
n
100
GLN
100
A
GLY
101
n
101
GLY
101
A
THR
102
n
102
THR
102
A
LYS
103
n
103
LYS
103
A
VAL
104
n
104
VAL
104
A
GLU
105
n
105
GLU
105
A
ILE
106
n
106
ILE
106
A
LYS
107
n
107
LYS
107
A
ARG
108
n
108
ARG
108
A
THR
109
n
109
THR
109
A
GLU
1
n
1
GLU
1
B
VAL
2
n
2
VAL
2
B
GLN
3
n
3
GLN
3
B
LEU
4
n
4
LEU
4
B
VAL
5
n
5
VAL
5
B
GLU
6
n
6
GLU
6
B
SER
7
n
7
SER
7
B
GLY
8
n
8
GLY
8
B
GLY
9
n
9
GLY
9
B
GLY
10
n
10
GLY
10
B
LEU
11
n
11
LEU
11
B
VAL
12
n
12
VAL
12
B
GLN
13
n
13
GLN
13
B
PRO
14
n
14
PRO
14
B
GLY
15
n
15
GLY
15
B
GLY
16
n
16
GLY
16
B
SER
17
n
17
SER
17
B
LEU
18
n
18
LEU
18
B
ARG
19
n
19
ARG
19
B
LEU
20
n
20
LEU
20
B
SER
21
n
21
SER
21
B
CYS
22
n
22
CYS
22
B
ALA
23
n
23
ALA
23
B
ALA
24
n
24
ALA
24
B
SER
25
n
25
SER
25
B
GLY
26
n
26
GLY
26
B
PHE
27
n
27
PHE
27
B
ASN
28
n
28
ASN
28
B
ILE
29
n
29
ILE
29
B
LYS
30
n
30
LYS
30
B
ASP
31
n
31
ASP
31
B
THR
32
n
32
THR
32
B
TYR
33
n
33
TYR
33
B
ILE
34
n
34
ILE
34
B
HIS
35
n
35
HIS
35
B
TRP
36
n
36
TRP
36
B
VAL
37
n
37
VAL
37
B
ARG
38
n
38
ARG
38
B
GLN
39
n
39
GLN
39
B
ALA
40
n
40
ALA
40
B
PRO
41
n
41
PRO
41
B
GLY
42
n
42
GLY
42
B
LYS
43
n
43
LYS
43
B
GLY
44
n
44
GLY
44
B
LEU
45
n
45
LEU
45
B
GLU
46
n
46
GLU
46
B
TRP
47
n
47
TRP
47
B
VAL
48
n
48
VAL
48
B
ALA
49
n
49
ALA
49
B
ARG
50
n
50
ARG
50
B
ILE
51
n
51
ILE
51
B
TYR
52
n
52
TYR
52
B
PRO
53
n
53
PRO
53
B
THR
54
n
54
THR
54
B
ASN
55
n
55
ASN
55
B
GLY
56
n
56
GLY
56
B
TYR
57
n
57
TYR
57
B
THR
58
n
58
THR
58
B
ARG
59
n
59
ARG
59
B
TYR
60
n
60
TYR
60
B
ALA
61
n
61
ALA
61
B
ASP
62
n
62
ASP
62
B
SER
63
n
63
SER
63
B
VAL
64
n
64
VAL
64
B
LYS
65
n
65
LYS
65
B
GLY
66
n
66
GLY
66
B
ARG
67
n
67
ARG
67
B
PHE
68
n
68
PHE
68
B
THR
69
n
69
THR
69
B
ILE
70
n
70
ILE
70
B
SER
71
n
71
SER
71
B
ALA
72
n
72
ALA
72
B
ASP
73
n
73
ASP
73
B
THR
74
n
74
THR
74
B
SER
75
n
75
SER
75
B
LYS
76
n
76
LYS
76
B
ASN
77
n
77
ASN
77
B
THR
78
n
78
THR
78
B
ALA
79
n
79
ALA
79
B
TYR
80
n
80
TYR
80
B
LEU
81
n
81
LEU
81
B
GLN
82
n
82
GLN
82
B
MET
83
n
83
MET
83
B
ASN
84
n
84
ASN
84
B
SER
85
n
85
SER
85
B
LEU
86
n
86
LEU
86
B
ARG
87
n
87
ARG
87
B
ALA
88
n
88
ALA
88
B
GLU
89
n
89
GLU
89
B
ASP
90
n
90
ASP
90
B
THR
91
n
91
THR
91
B
ALA
92
n
92
ALA
92
B
VAL
93
n
93
VAL
93
B
TYR
94
n
94
TYR
94
B
TYR
95
n
95
TYR
95
B
CYS
96
n
96
CYS
96
B
SER
97
n
97
SER
97
B
ARG
98
n
98
ARG
98
B
TRP
99
n
99
TRP
99
B
GLY
100
n
100
GLY
100
B
GLY
101
n
101
GLY
101
B
ASP
102
n
102
ASP
102
B
GLY
103
n
103
GLY
103
B
PHE
104
n
104
PHE
104
B
TYR
105
n
105
TYR
105
B
ALA
106
n
106
ALA
106
B
MET
107
n
107
MET
107
B
ASP
108
n
108
ASP
108
B
TYR
109
n
109
TYR
109
B
TRP
110
n
110
TRP
110
B
GLY
111
n
111
GLY
111
B
GLN
112
n
112
GLN
112
B
GLY
113
n
113
GLY
113
B
THR
114
n
114
THR
114
B
LEU
115
n
115
LEU
115
B
VAL
116
n
116
VAL
116
B
THR
117
n
117
THR
117
B
VAL
118
n
118
VAL
118
B
SER
119
n
119
SER
119
B
SER
120
n
120
SER
120
B
ASP
1
n
1
ASP
1
C
ILE
2
n
2
ILE
2
C
GLN
3
n
3
GLN
3
C
MET
4
n
4
MET
4
C
THR
5
n
5
THR
5
C
GLN
6
n
6
GLN
6
C
SER
7
n
7
SER
7
C
PRO
8
n
8
PRO
8
C
SER
9
n
9
SER
9
C
SER
10
n
10
SER
10
C
LEU
11
n
11
LEU
11
C
SER
12
n
12
SER
12
C
ALA
13
n
13
ALA
13
C
SER
14
n
14
SER
14
C
VAL
15
n
15
VAL
15
C
GLY
16
n
16
GLY
16
C
ASP
17
n
17
ASP
17
C
ARG
18
n
18
ARG
18
C
VAL
19
n
19
VAL
19
C
THR
20
n
20
THR
20
C
ILE
21
n
21
ILE
21
C
THR
22
n
22
THR
22
C
CYS
23
n
23
CYS
23
C
ARG
24
n
24
ARG
24
C
ALA
25
n
25
ALA
25
C
SER
26
n
26
SER
26
C
GLN
27
n
27
GLN
27
C
ASP
28
n
28
ASP
28
C
VAL
29
n
29
VAL
29
C
ASN
30
n
30
ASN
30
C
THR
31
n
31
THR
31
C
ALA
32
n
32
ALA
32
C
VAL
33
n
33
VAL
33
C
ALA
34
n
34
ALA
34
C
TRP
35
n
35
TRP
35
C
TYR
36
n
36
TYR
36
C
GLN
37
n
37
GLN
37
C
GLN
38
n
38
GLN
38
C
LYS
39
n
39
LYS
39
C
PRO
40
n
40
PRO
40
C
GLY
41
n
41
GLY
41
C
LYS
42
n
42
LYS
42
C
ALA
43
n
43
ALA
43
C
PRO
44
n
44
PRO
44
C
LYS
45
n
45
LYS
45
C
LEU
46
n
46
LEU
46
C
LEU
47
n
47
LEU
47
C
ILE
48
n
48
ILE
48
C
TYR
49
n
49
TYR
49
C
SER
50
n
50
SER
50
C
ALA
51
n
51
ALA
51
C
SER
52
n
52
SER
52
C
PHE
53
n
53
PHE
53
C
LEU
54
n
54
LEU
54
C
TYR
55
n
55
TYR
55
C
SER
56
n
56
SER
56
C
GLY
57
n
57
GLY
57
C
VAL
58
n
58
VAL
58
C
PRO
59
n
59
PRO
59
C
SER
60
n
60
SER
60
C
ARG
61
n
61
ARG
61
C
PHE
62
n
62
PHE
62
C
SER
63
n
63
SER
63
C
GLY
64
n
64
GLY
64
C
SER
65
n
65
SER
65
C
ARG
66
n
66
ARG
66
C
SER
67
n
67
SER
67
C
GLY
68
n
68
GLY
68
C
THR
69
n
69
THR
69
C
ASP
70
n
70
ASP
70
C
PHE
71
n
71
PHE
71
C
THR
72
n
72
THR
72
C
LEU
73
n
73
LEU
73
C
THR
74
n
74
THR
74
C
ILE
75
n
75
ILE
75
C
SER
76
n
76
SER
76
C
SER
77
n
77
SER
77
C
LEU
78
n
78
LEU
78
C
GLN
79
n
79
GLN
79
C
PRO
80
n
80
PRO
80
C
GLU
81
n
81
GLU
81
C
ASP
82
n
82
ASP
82
C
PHE
83
n
83
PHE
83
C
ALA
84
n
84
ALA
84
C
THR
85
n
85
THR
85
C
TYR
86
n
86
TYR
86
C
TYR
87
n
87
TYR
87
C
CYS
88
n
88
CYS
88
C
GLN
89
n
89
GLN
89
C
GLN
90
n
90
GLN
90
C
HIS
91
n
91
HIS
91
C
TYR
92
n
92
TYR
92
C
THR
93
n
93
THR
93
C
THR
94
n
94
THR
94
C
PRO
95
n
95
PRO
95
C
PRO
96
n
96
PRO
96
C
THR
97
n
97
THR
97
C
PHE
98
n
98
PHE
98
C
GLY
99
n
99
GLY
99
C
GLN
100
n
100
GLN
100
C
GLY
101
n
101
GLY
101
C
THR
102
n
102
THR
102
C
LYS
103
n
103
LYS
103
C
VAL
104
n
104
VAL
104
C
GLU
105
n
105
GLU
105
C
ILE
106
n
106
ILE
106
C
LYS
107
n
107
LYS
107
C
ARG
108
n
108
ARG
108
C
n
109
109
C
GLU
1
n
1
GLU
1
D
VAL
2
n
2
VAL
2
D
GLN
3
n
3
GLN
3
D
LEU
4
n
4
LEU
4
D
VAL
5
n
5
VAL
5
D
GLU
6
n
6
GLU
6
D
SER
7
n
7
SER
7
D
GLY
8
n
8
GLY
8
D
GLY
9
n
9
GLY
9
D
GLY
10
n
10
GLY
10
D
LEU
11
n
11
LEU
11
D
VAL
12
n
12
VAL
12
D
GLN
13
n
13
GLN
13
D
PRO
14
n
14
PRO
14
D
GLY
15
n
15
GLY
15
D
GLY
16
n
16
GLY
16
D
SER
17
n
17
SER
17
D
LEU
18
n
18
LEU
18
D
ARG
19
n
19
ARG
19
D
LEU
20
n
20
LEU
20
D
SER
21
n
21
SER
21
D
CYS
22
n
22
CYS
22
D
ALA
23
n
23
ALA
23
D
ALA
24
n
24
ALA
24
D
SER
25
n
25
SER
25
D
GLY
26
n
26
GLY
26
D
PHE
27
n
27
PHE
27
D
ASN
28
n
28
ASN
28
D
ILE
29
n
29
ILE
29
D
LYS
30
n
30
LYS
30
D
ASP
31
n
31
ASP
31
D
THR
32
n
32
THR
32
D
TYR
33
n
33
TYR
33
D
ILE
34
n
34
ILE
34
D
HIS
35
n
35
HIS
35
D
TRP
36
n
36
TRP
36
D
VAL
37
n
37
VAL
37
D
ARG
38
n
38
ARG
38
D
GLN
39
n
39
GLN
39
D
ALA
40
n
40
ALA
40
D
PRO
41
n
41
PRO
41
D
GLY
42
n
42
GLY
42
D
LYS
43
n
43
LYS
43
D
GLY
44
n
44
GLY
44
D
LEU
45
n
45
LEU
45
D
GLU
46
n
46
GLU
46
D
TRP
47
n
47
TRP
47
D
VAL
48
n
48
VAL
48
D
ALA
49
n
49
ALA
49
D
ARG
50
n
50
ARG
50
D
ILE
51
n
51
ILE
51
D
TYR
52
n
52
TYR
52
D
PRO
53
n
53
PRO
53
D
THR
54
n
54
THR
54
D
ASN
55
n
55
ASN
55
D
GLY
56
n
56
GLY
56
D
TYR
57
n
57
TYR
57
D
THR
58
n
58
THR
58
D
ARG
59
n
59
ARG
59
D
TYR
60
n
60
TYR
60
D
ALA
61
n
61
ALA
61
D
ASP
62
n
62
ASP
62
D
SER
63
n
63
SER
63
D
VAL
64
n
64
VAL
64
D
LYS
65
n
65
LYS
65
D
GLY
66
n
66
GLY
66
D
ARG
67
n
67
ARG
67
D
PHE
68
n
68
PHE
68
D
THR
69
n
69
THR
69
D
ILE
70
n
70
ILE
70
D
SER
71
n
71
SER
71
D
ALA
72
n
72
ALA
72
D
ASP
73
n
73
ASP
73
D
THR
74
n
74
THR
74
D
SER
75
n
75
SER
75
D
LYS
76
n
76
LYS
76
D
ASN
77
n
77
ASN
77
D
THR
78
n
78
THR
78
D
ALA
79
n
79
ALA
79
D
TYR
80
n
80
TYR
80
D
LEU
81
n
81
LEU
81
D
GLN
82
n
82
GLN
82
D
MET
83
n
83
MET
83
D
ASN
84
n
84
ASN
84
D
SER
85
n
85
SER
85
D
LEU
86
n
86
LEU
86
D
ARG
87
n
87
ARG
87
D
ALA
88
n
88
ALA
88
D
GLU
89
n
89
GLU
89
D
ASP
90
n
90
ASP
90
D
THR
91
n
91
THR
91
D
ALA
92
n
92
ALA
92
D
VAL
93
n
93
VAL
93
D
TYR
94
n
94
TYR
94
D
TYR
95
n
95
TYR
95
D
CYS
96
n
96
CYS
96
D
SER
97
n
97
SER
97
D
ARG
98
n
98
ARG
98
D
TRP
99
n
99
TRP
99
D
GLY
100
n
100
GLY
100
D
GLY
101
n
101
GLY
101
D
ASP
102
n
102
ASP
102
D
GLY
103
n
103
GLY
103
D
PHE
104
n
104
PHE
104
D
TYR
105
n
105
TYR
105
D
ALA
106
n
106
ALA
106
D
MET
107
n
107
MET
107
D
ASP
108
n
108
ASP
108
D
TYR
109
n
109
TYR
109
D
TRP
110
n
110
TRP
110
D
GLY
111
n
111
GLY
111
D
GLN
112
n
112
GLN
112
D
GLY
113
n
113
GLY
113
D
THR
114
n
114
THR
114
D
LEU
115
n
115
LEU
115
D
VAL
116
n
116
VAL
116
D
THR
117
n
117
THR
117
D
VAL
118
n
118
VAL
118
D
SER
119
n
119
SER
119
D
SER
120
n
120
SER
120
D
author_and_software_defined_assembly
PISA
2
dimeric
author_and_software_defined_assembly
PISA
2
dimeric
1480
-12
10220
1430
-12
9860
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
SER
7
A
N
SER
7
A
O
THR
22
A
O
THR
22
A
N
CYS
23
A
N
CYS
23
A
O
PHE
71
A
O
PHE
71
A
O
THR
74
A
O
THR
74
A
N
SER
63
A
N
SER
63
A
N
LEU
11
A
N
LEU
11
A
O
LYS
103
A
O
LYS
103
A
O
THR
97
A
O
THR
97
A
N
GLN
90
A
N
GLN
90
A
O
TYR
87
A
O
TYR
87
A
O
TYR
36
A
O
TYR
36
A
O
GLN
37
A
O
GLN
37
A
N
LYS
45
A
N
LYS
45
A
O
ILE
48
A
O
ILE
48
A
N
PHE
53
A
N
PHE
53
B
O
VAL
5
B
O
VAL
5
B
O
ALA
23
B
O
ALA
23
B
O
CYS
22
B
O
CYS
22
B
N
ALA
79
B
N
ALA
79
B
O
TYR
80
B
O
TYR
80
B
N
SER
71
B
N
SER
71
B
O
GLY
10
B
O
GLY
10
B
N
THR
117
B
N
THR
117
B
O
THR
114
B
O
THR
114
B
N
TYR
94
B
N
TYR
94
B
N
SER
97
B
N
SER
97
B
O
HIS
35
B
O
HIS
35
B
N
TRP
36
B
N
TRP
36
B
O
ALA
49
B
O
ALA
49
B
O
ARG
50
B
O
ARG
50
B
O
ARG
59
B
O
ARG
59
C
O
SER
7
C
O
SER
7
C
N
THR
22
C
N
THR
22
C
O
ILE
21
C
O
ILE
21
C
N
LEU
73
C
N
LEU
73
C
N
THR
74
C
N
THR
74
C
O
SER
63
C
O
SER
63
C
O
LEU
11
C
O
LEU
11
C
N
GLU
105
C
N
GLU
105
C
O
THR
102
C
O
THR
102
C
N
TYR
86
C
N
TYR
86
C
O
TYR
87
C
O
TYR
87
C
N
TYR
36
C
N
TYR
36
C
O
VAL
33
C
O
VAL
33
C
N
SER
50
C
N
SER
50
C
O
TYR
49
C
O
TYR
49
C
N
PHE
53
C
N
PHE
53
D
O
SER
7
D
O
SER
7
D
N
SER
21
D
N
SER
21
D
O
LEU
20
D
O
LEU
20
D
N
LEU
81
D
N
LEU
81
D
N
GLN
82
D
N
GLN
82
D
O
THR
69
D
O
THR
69
D
O
GLY
10
D
O
GLY
10
D
N
THR
117
D
N
THR
117
D
O
TYR
109
D
O
TYR
109
D
N
ARG
98
D
N
ARG
98
D
O
SER
97
D
O
SER
97
D
N
HIS
35
D
N
HIS
35
D
O
ILE
34
D
O
ILE
34
D
N
ILE
51
D
N
ILE
51
D
O
VAL
48
D
O
VAL
48
D
N
ALA
61
D
N
ALA
61
1
A
CG
ARG
108
A
CG
ARG
108
1
Y
1
A
CD
ARG
108
A
CD
ARG
108
1
Y
1
A
NE
ARG
108
A
NE
ARG
108
1
Y
1
A
CZ
ARG
108
A
CZ
ARG
108
1
Y
1
A
NH1
ARG
108
A
NH1
ARG
108
1
Y
1
A
NH2
ARG
108
A
NH2
ARG
108
1
Y
1
C
CG
ARG
108
C
CG
ARG
108
1
Y
1
C
CD
ARG
108
C
CD
ARG
108
1
Y
1
C
NE
ARG
108
C
NE
ARG
108
1
Y
1
C
CZ
ARG
108
C
CZ
ARG
108
1
Y
1
C
NH1
ARG
108
C
NH1
ARG
108
1
Y
1
C
NH2
ARG
108
C
NH2
ARG
108
1
Y
1
C
THR
109
C
THR
109
1
Y
1
B
TYR
57
0.090
SIDE CHAIN
1
-13.49
2.20
117.20
103.71
A
A
A
CA
C
N
ASP
ASP
ILE
1
1
2
Y
1
3.90
0.50
120.30
124.20
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
18
18
18
N
1
-3.35
0.50
120.30
116.95
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
18
18
18
N
1
-12.37
1.80
114.00
101.63
A
A
A
CA
CB
SG
CYS
CYS
CYS
23
23
23
N
1
8.36
0.80
106.30
114.66
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
35
35
35
N
1
-7.15
1.00
110.10
102.95
A
A
A
CG
CD1
NE1
TRP
TRP
TRP
35
35
35
N
1
-6.68
0.80
107.30
100.62
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
35
35
35
N
1
8.02
0.90
133.90
141.92
A
A
A
CG
CD2
CE3
TRP
TRP
TRP
35
35
35
N
1
3.01
0.50
120.30
123.31
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
66
66
66
N
1
-11.98
1.90
110.30
98.32
A
A
A
N
CA
CB
THR
THR
THR
69
69
69
N
1
-3.67
0.60
121.00
117.33
A
A
A
CB
CG
CD2
TYR
TYR
TYR
86
86
86
N
1
3.81
0.50
120.30
124.11
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
19
19
19
N
1
-3.25
0.50
120.30
117.05
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
19
19
19
N
1
-11.81
1.90
111.00
99.19
B
B
B
CA
CB
CG1
ILE
ILE
ILE
29
29
29
N
1
5.55
0.80
106.30
111.85
B
B
B
CD1
CG
CD2
TRP
TRP
TRP
36
36
36
N
1
-5.39
0.80
107.30
101.91
B
B
B
CE2
CD2
CG
TRP
TRP
TRP
36
36
36
N
1
16.31
2.70
111.00
127.31
B
B
B
N
CA
C
LYS
LYS
LYS
43
43
43
N
1
5.49
0.80
106.30
111.79
B
B
B
CD1
CG
CD2
TRP
TRP
TRP
47
47
47
N
1
-5.89
0.80
107.30
101.41
B
B
B
CE2
CD2
CG
TRP
TRP
TRP
47
47
47
N
1
6.42
0.90
133.90
140.32
B
B
B
CG
CD2
CE3
TRP
TRP
TRP
47
47
47
N
1
-10.55
1.60
110.90
100.35
B
B
B
CG1
CB
CG2
VAL
VAL
VAL
48
48
48
N
1
-4.62
0.60
121.00
116.38
B
B
B
CB
CG
CD2
TYR
TYR
TYR
52
52
52
N
1
-3.67
0.60
121.00
117.33
B
B
B
CB
CG
CD2
TYR
TYR
TYR
57
57
57
N
1
-15.99
2.20
111.50
95.51
B
B
B
N
CA
CB
VAL
VAL
VAL
64
64
64
N
1
-5.13
0.60
121.00
115.87
B
B
B
CB
CG
CD1
TYR
TYR
TYR
80
80
80
N
1
-13.54
1.60
100.20
86.66
B
B
B
CG
SD
CE
MET
MET
MET
83
83
83
N
1
3.77
0.50
120.30
124.07
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
98
98
98
N
1
-4.01
0.50
120.30
116.29
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
98
98
98
N
1
5.49
0.80
106.30
111.79
B
B
B
CD1
CG
CD2
TRP
TRP
TRP
99
99
99
N
1
-4.95
0.80
107.30
102.35
B
B
B
CE2
CD2
CG
TRP
TRP
TRP
99
99
99
N
1
5.30
0.80
106.30
111.60
B
B
B
CD1
CG
CD2
TRP
TRP
TRP
110
110
110
N
1
-4.93
0.80
107.30
102.37
B
B
B
CE2
CD2
CG
TRP
TRP
TRP
110
110
110
N
1
24.33
2.30
115.30
139.63
C
C
C
CA
CB
CG
LEU
LEU
LEU
11
11
11
N
1
4.26
0.50
120.30
124.56
C
C
C
NE
CZ
NH1
ARG
ARG
ARG
24
24
24
N
1
-3.25
0.50
120.30
117.05
C
C
C
NE
CZ
NH2
ARG
ARG
ARG
24
24
24
N
1
-14.43
2.20
111.50
97.07
C
C
C
N
CA
CB
VAL
VAL
VAL
29
29
29
N
1
6.18
0.80
106.30
112.48
C
C
C
CD1
CG
CD2
TRP
TRP
TRP
35
35
35
N
1
-5.80
0.80
107.30
101.50
C
C
C
CE2
CD2
CG
TRP
TRP
TRP
35
35
35
N
1
5.45
0.90
133.90
139.35
C
C
C
CG
CD2
CE3
TRP
TRP
TRP
35
35
35
N
1
-3.70
0.60
121.00
117.30
C
C
C
CB
CG
CD2
TYR
TYR
TYR
49
49
49
N
1
13.30
2.20
117.20
130.50
C
C
C
CA
C
N
GLY
GLY
VAL
57
57
58
Y
1
-4.39
0.60
121.00
116.61
C
C
C
CB
CG
CD2
TYR
TYR
TYR
92
92
92
N
1
-4.28
0.60
121.00
116.72
D
D
D
CB
CG
CD2
TYR
TYR
TYR
33
33
33
N
1
3.58
0.50
120.30
123.88
D
D
D
NE
CZ
NH1
ARG
ARG
ARG
38
38
38
N
1
7.23
0.80
106.30
113.53
D
D
D
CD1
CG
CD2
TRP
TRP
TRP
47
47
47
N
1
-6.71
1.00
110.10
103.39
D
D
D
CG
CD1
NE1
TRP
TRP
TRP
47
47
47
N
1
-5.12
0.80
107.30
102.18
D
D
D
CE2
CD2
CG
TRP
TRP
TRP
47
47
47
N
1
-5.77
0.60
121.00
115.23
D
D
D
CB
CG
CD2
TYR
TYR
TYR
57
57
57
N
1
4.32
0.50
120.30
124.62
D
D
D
NE
CZ
NH1
ARG
ARG
ARG
59
59
59
N
1
-4.09
0.60
121.00
116.91
D
D
D
CB
CG
CD1
TYR
TYR
TYR
60
60
60
N
1
-4.00
0.60
121.00
117.00
D
D
D
CB
CG
CD2
TYR
TYR
TYR
80
80
80
N
1
5.56
0.80
106.30
111.86
D
D
D
CD1
CG
CD2
TRP
TRP
TRP
99
99
99
N
1
-5.07
0.80
107.30
102.23
D
D
D
CE2
CD2
CG
TRP
TRP
TRP
99
99
99
N
1
6.21
0.80
106.30
112.51
D
D
D
CD1
CG
CD2
TRP
TRP
TRP
110
110
110
N
1
-7.82
1.30
127.00
119.18
D
D
D
CB
CG
CD1
TRP
TRP
TRP
110
110
110
N
1
-6.01
0.80
107.30
101.29
D
D
D
CE2
CD2
CG
TRP
TRP
TRP
110
110
110
N
1
5.91
0.90
133.90
139.81
D
D
D
CG
CD2
CE3
TRP
TRP
TRP
110
110
110
N
1
A
A
NE2
CD2
HIS
HIS
91
91
-0.069
0.011
1.373
1.304
N
1
D
D
NE2
CD2
HIS
HIS
35
35
-0.076
0.011
1.373
1.297
N
1
A
ASN
30
67.70
-121.56
1
A
ALA
51
54.78
-13.57
1
A
SER
52
-157.08
17.85
1
A
SER
60
-59.72
-3.67
1
A
SER
77
-168.16
94.57
1
B
TYR
105
-105.90
42.42
1
C
ASN
30
60.04
-126.43
1
C
ALA
32
-67.60
65.00
1
C
ALA
51
50.13
-22.13
1
C
SER
52
-152.09
11.17
1
C
ALA
84
-165.39
-168.80
1
D
VAL
2
113.04
107.34
1
D
ASN
55
-150.97
3.84
1
D
ALA
92
178.90
168.94
1
D
ASP
102
0.76
117.39
1
D
SER
119
-132.09
-50.44
0.183
0.183
2.2
10.
1
2.0
2.2
10.
126
3647
0
0
3521
0.015
3.2
model building
X-PLOR
refinement
X-PLOR
phasing
X-PLOR
FV FRAGMENT OF HUMANIZED ANTIBODY 4D5, VERSION 8
X-RAY STRUCTURES OF THE ANTIGEN-BINDING DOMAINS FROM THREE VARIANTS OF HUMANIZED ANTI-P185-HER2 ANTIBODY 4D5 AND COMPARISON WITH MOLECULAR MODELING
1
N
N
2
N
N
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
THERE ARE TWO MOLECULES IN THE ASYMMETRIC UNIT. THE LIGHT
AND HEAVY CHAINS OF MOLECULE 1 ARE DENOTED BY CHAIN
IDENTIFIERS *A* AND *B*. THE LIGHT AND HEAVY CHAINS OF
MOLECULE 2 ARE DENOTED BY THE CHAIN IDENTIFIERS *C* AND
*D*.
THE TRANSFORMATION PRESENTED ON *MTRIX* RECORDS BELOW WILL
YIELD APPROXIMATE COORDINATES FOR CHAINS *A* AND *B* WHEN
APPLIED TO CHAINS *C* AND *D*.
A
GLN
79
A
GLN
79
HELX_P
A
PHE
83
A
PHE
83
5
1
5
B
ARG
87
B
ARG
87
HELX_P
B
THR
91
B
THR
91
5
2
5
C
GLN
79
C
GLN
79
HELX_P
C
PHE
83
C
PHE
83
5
3
5
D
ARG
87
D
ARG
87
HELX_P
D
THR
91
D
THR
91
5
4
5
disulf
2.001
A
CYS
23
A
SG
CYS
23
1_555
A
CYS
88
A
SG
CYS
88
1_555
disulf
2.017
B
CYS
22
B
SG
CYS
22
1_555
B
CYS
96
B
SG
CYS
96
1_555
disulf
2.003
C
CYS
23
C
SG
CYS
23
1_555
C
CYS
88
C
SG
CYS
88
1_555
disulf
2.004
D
CYS
22
D
SG
CYS
22
1_555
D
CYS
96
D
SG
CYS
96
1_555
IMMUNOGLOBULIN
IMMUNOGLOBULIN
A
SER
7
A
SER
7
1
A
PRO
8
A
PRO
8
-3.19
A
THR
94
A
THR
94
1
A
PRO
95
A
PRO
95
-3.61
C
SER
7
C
SER
7
1
C
PRO
8
C
PRO
8
-4.03
C
THR
94
C
THR
94
1
C
PRO
95
C
PRO
95
-9.95
given
-0.997760
0.036730
0.055950
0.037030
-0.999300
-0.004350
0.055760
-0.006410
0.998420
36.96113
27.31182
-0.46846
AAA59089
GB
1
1
185985
MDMRVPAQLLGLLLLWLRGARCDIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGV
PSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPPWTFGQGTKVEIKRTVAAPSVFIFPPS
1FVC
PDB
2
1FVC
23
132
1FVC
1
109
185985
A
1
1
109
23
132
1FVC
1
109
185985
C
1
1
109
1
120
1FVC
1
120
1FVC
B
2
1
120
1
120
1FVC
1
120
1FVC
D
2
1
120
1
SER
CONFLICT
ASP
28
1FVC
A
185985
GB
50
28
1
ILE
CONFLICT
VAL
29
1FVC
A
185985
GB
51
29
1
SER
CONFLICT
ASN
30
1FVC
A
185985
GB
52
30
1
SER
CONFLICT
THR
31
1FVC
A
185985
GB
53
31
1
TYR
CONFLICT
ALA
32
1FVC
A
185985
GB
54
32
1
LEU
CONFLICT
VAL
33
1FVC
A
185985
GB
55
33
1
ASN
CONFLICT
ALA
34
1FVC
A
185985
GB
56
34
1
ALA
CONFLICT
SER
50
1FVC
A
185985
GB
72
50
1
SER
CONFLICT
PHE
53
1FVC
A
185985
GB
75
53
1
GLN
CONFLICT
TYR
55
1FVC
A
185985
GB
77
55
1
GLY
CONFLICT
ARG
66
1FVC
A
185985
GB
88
66
1
SER
CONFLICT
HIS
91
1FVC
A
185985
GB
113
91
1
SER
CONFLICT
THR
93
1FVC
A
185985
GB
115
93
1
TRP
DELETION
1FVC
A
185985
GB
119
2
SER
CONFLICT
ASP
28
1FVC
C
185985
GB
50
28
2
ILE
CONFLICT
VAL
29
1FVC
C
185985
GB
51
29
2
SER
CONFLICT
ASN
30
1FVC
C
185985
GB
52
30
2
SER
CONFLICT
THR
31
1FVC
C
185985
GB
53
31
2
TYR
CONFLICT
ALA
32
1FVC
C
185985
GB
54
32
2
LEU
CONFLICT
VAL
33
1FVC
C
185985
GB
55
33
2
ASN
CONFLICT
ALA
34
1FVC
C
185985
GB
56
34
2
ALA
CONFLICT
SER
50
1FVC
C
185985
GB
72
50
2
SER
CONFLICT
PHE
53
1FVC
C
185985
GB
75
53
2
GLN
CONFLICT
TYR
55
1FVC
C
185985
GB
77
55
2
GLY
CONFLICT
ARG
66
1FVC
C
185985
GB
88
66
2
SER
CONFLICT
HIS
91
1FVC
C
185985
GB
113
91
2
SER
CONFLICT
THR
93
1FVC
C
185985
GB
115
93
2
TRP
DELETION
1FVC
C
185985
GB
119
4
6
4
6
4
6
4
6
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLN
3
A
GLN
3
A
SER
7
A
SER
7
A
VAL
19
A
VAL
19
A
ALA
25
A
ALA
25
A
ASP
70
A
ASP
70
A
ILE
75
A
ILE
75
A
ARG
61
A
ARG
61
A
SER
67
A
SER
67
A
SER
9
A
SER
9
A
ALA
13
A
ALA
13
A
THR
97
A
THR
97
A
GLU
105
A
GLU
105
A
THR
85
A
THR
85
A
HIS
91
A
HIS
91
A
ALA
32
A
ALA
32
A
GLN
38
A
GLN
38
A
LYS
45
A
LYS
45
A
ILE
48
A
ILE
48
A
PHE
53
A
PHE
53
A
TYR
55
A
TYR
55
B
GLN
3
B
GLN
3
B
SER
7
B
SER
7
B
GLY
16
B
GLY
16
B
SER
25
B
SER
25
B
ASN
77
B
ASN
77
B
SER
85
B
SER
85
B
ARG
67
B
ARG
67
B
ASP
73
B
ASP
73
B
GLY
10
B
GLY
10
B
VAL
12
B
VAL
12
B
TYR
109
B
TYR
109
B
SER
119
B
SER
119
B
ALA
92
B
ALA
92
B
TRP
99
B
TRP
99
B
TYR
33
B
TYR
33
B
ARG
38
B
ARG
38
B
GLU
46
B
GLU
46
B
TYR
52
B
TYR
52
B
TYR
57
B
TYR
57
B
ALA
61
B
ALA
61
C
GLN
3
C
GLN
3
C
SER
7
C
SER
7
C
VAL
19
C
VAL
19
C
SER
26
C
SER
26
C
THR
69
C
THR
69
C
ILE
75
C
ILE
75
C
ARG
61
C
ARG
61
C
SER
67
C
SER
67
C
SER
9
C
SER
9
C
ALA
13
C
ALA
13
C
THR
97
C
THR
97
C
LYS
107
C
LYS
107
C
ALA
84
C
ALA
84
C
GLN
90
C
GLN
90
C
VAL
33
C
VAL
33
C
GLN
38
C
GLN
38
C
LEU
47
C
LEU
47
C
SER
50
C
SER
50
C
PHE
53
C
PHE
53
C
TYR
55
C
TYR
55
D
GLN
3
D
GLN
3
D
SER
7
D
SER
7
D
GLY
16
D
GLY
16
D
SER
25
D
SER
25
D
ASN
77
D
ASN
77
D
SER
85
D
SER
85
D
THR
69
D
THR
69
D
ASP
73
D
ASP
73
D
GLY
10
D
GLY
10
D
VAL
12
D
VAL
12
D
TYR
109
D
TYR
109
D
SER
119
D
SER
119
D
ALA
92
D
ALA
92
D
ARG
98
D
ARG
98
D
ILE
34
D
ILE
34
D
GLN
39
D
GLN
39
D
GLU
46
D
GLU
46
D
TYR
52
D
TYR
52
D
GLY
56
D
GLY
56
D
ALA
61
D
ALA
61
4
P 1 21 1