0.025826
0.000000
0.000000
0.000000
0.015024
0.000000
0.000000
0.000000
0.009710
0.00000
0.00000
0.00000
Kastrup, J.S.
Linde, V.
Pedersen, A.K.
Stoffer, B.
Iversen, L.F.
Larsen, I.K.
Rasmussen, P.B.
Flodgaard, H.J.
Bjorn, S.E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
38.720
66.560
102.990
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O
46.068
ETHANOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Proteins
PSFGEY
0867
0887-3585
42
442
451
10.1002/1097-0134(20010301)42:4<442::AID-PROT30>3.0.CO;2-S
11170199
Two mutants of human heparin binding protein (CAP37): toward the understanding of the nature of lipid A/LPS and BPTI binding.
2001
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
54
598
609
10.1107/S0907444997016193
Atomic resolution structure of human HBP/CAP37/Azurocidin
1998
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
4
265
268
Structure of HBP, a multifunctional protein with a serine proteinase fold
1997
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
52
1222
1223
10.1107/S0907444996010086
Crystallization and Molecular Replacement Solution of Human Heparin Binding Protein
1996
US
Protein Sci.
PRCIEI
0795
0961-8368
8
2019
2026
Structure and function of the N-linked glycans of HBP/CAP37/azurocidin: Crystal structure determination and biological characterization of nonglycosylated HBP
1999
10.2210/pdb1fy1/pdb
pdb_00001fy1
ASN A 47 HAS WRONG CHIRALITY AT ATOM CA
NAG B 2 HAS WRONG CHIRALITY AT ATOM C1
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
277
1
IMAGE PLATE
1998-04-20
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
0.835
1.0
BW7B
EMBL/DESY, HAMBURG
0.835
SYNCHROTRON
EMBL/DESY, HAMBURG BEAMLINE BW7B
24214.299
HEPARIN-BINDING PROTEIN
R23S, F25E
1
man
polymer
424.401
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1
man
branched
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
2
man
non-polymer
46.068
ETHANOL
1
syn
non-polymer
18.015
water
53
nat
water
HBP, AZUROCIDIN, CATIONIC ANTIMICROBIAL PROTEIN CAP37
no
no
IVGGRKARPRQFPFLASIQNQGSHECGGALIHARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENG
YDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQCRPNNVC
TGVLTRRGGICNGDGGTPLVCEGLAHGVASFSLGPCGRGPDFFTRVALFRDWIDGVLNNPGPGPA
IVGGRKARPRQFPFLASIQNQGSHECGGALIHARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENG
YDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQCRPNNVC
TGVLTRRGGICNGDGGTPLVCEGLAHGVASFSLGPCGRGPDFFTRVALFRDWIDGVLNNPGPGPA
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
sample
9606
Homo sapiens
SF-900
10469
unidentified baculovirus
ACMNPV
1
2.74
55.09
VAPOR DIFFUSION, HANGING DROP
7.2
Ethanol, 1,2,5-trihydroxyhexane, TRIS, pH 7.2, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
atom_site
chem_comp
database_PDB_caveat
diffrn_source
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
pdbx_validate_chiral
pdbx_validate_close_contact
struct_asym
struct_conn
struct_site
struct_site_gen
chem_comp
database_2
struct_ref_seq_dif
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Non-polymer description
Version format compliance
Advisory
Atomic model
Data collection
Derived calculations
Structure summary
Database references
Structure summary
1
0
2001-09-28
1
1
2008-04-27
1
2
2011-07-13
2
0
2020-07-29
2
1
2021-11-03
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_entity_id
_chem_comp.name
_chem_comp.type
_diffrn_source.pdbx_synchrotron_site
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_validate_chiral.auth_asym_id
_pdbx_validate_chiral.auth_seq_id
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
NAG
1141
n
B
NAG
1
NAG
1142
n
B
NAG
2
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
Atomic resolution structure of human HBP (cryogenic temperature)
Structure of HBP at 2.3 A (room temperature)
[G175Q] mutant human HBP
RCSB
Y
RCSB
2000-09-28
REL
REL
oligosaccharide
DGlcpNAcb1-4DGlcpNAcb1-
2
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1
2
PDB2Glycan
1.1.0
WURCS
[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][a-D-GlcpNAc]{}}}
2
PDB-CARE
LINUCS
C1
O4
NAG
NAG
2
1
2
O1
HO4
sing
n
n
NAG
2-acetamido-2-deoxy-beta-D-glucopyranose
EOH
ETHANOL
HOH
water
NAG
1001
3
NAG
NAG
1001
A
NAG
1451
3
NAG
NAG
1451
A
ETH
300
4
EOH
EOH
300
A
HOH
1501
5
HOH
HOH
1501
A
HOH
1502
5
HOH
HOH
1502
A
HOH
1503
5
HOH
HOH
1503
A
HOH
1504
5
HOH
HOH
1504
A
HOH
1505
5
HOH
HOH
1505
A
HOH
1506
5
HOH
HOH
1506
A
HOH
1507
5
HOH
HOH
1507
A
HOH
1508
5
HOH
HOH
1508
A
HOH
1509
5
HOH
HOH
1509
A
HOH
1510
5
HOH
HOH
1510
A
HOH
1511
5
HOH
HOH
1511
A
HOH
1512
5
HOH
HOH
1512
A
HOH
1513
5
HOH
HOH
1513
A
HOH
1514
5
HOH
HOH
1514
A
HOH
1515
5
HOH
HOH
1515
A
HOH
1516
5
HOH
HOH
1516
A
HOH
1517
5
HOH
HOH
1517
A
HOH
1518
5
HOH
HOH
1518
A
HOH
1519
5
HOH
HOH
1519
A
HOH
1520
5
HOH
HOH
1520
A
HOH
1521
5
HOH
HOH
1521
A
HOH
1522
5
HOH
HOH
1522
A
HOH
1523
5
HOH
HOH
1523
A
HOH
1524
5
HOH
HOH
1524
A
HOH
1525
5
HOH
HOH
1525
A
HOH
1526
5
HOH
HOH
1526
A
HOH
1527
5
HOH
HOH
1527
A
HOH
1528
5
HOH
HOH
1528
A
HOH
1529
5
HOH
HOH
1529
A
HOH
1530
5
HOH
HOH
1530
A
HOH
1531
5
HOH
HOH
1531
A
HOH
1532
5
HOH
HOH
1532
A
HOH
1533
5
HOH
HOH
1533
A
HOH
1534
5
HOH
HOH
1534
A
HOH
1535
5
HOH
HOH
1535
A
HOH
1536
5
HOH
HOH
1536
A
HOH
1537
5
HOH
HOH
1537
A
HOH
1538
5
HOH
HOH
1538
A
HOH
1539
5
HOH
HOH
1539
A
HOH
1540
5
HOH
HOH
1540
A
HOH
1541
5
HOH
HOH
1541
A
HOH
1542
5
HOH
HOH
1542
A
HOH
1543
5
HOH
HOH
1543
A
HOH
1544
5
HOH
HOH
1544
A
HOH
1545
5
HOH
HOH
1545
A
HOH
1546
5
HOH
HOH
1546
A
HOH
1547
5
HOH
HOH
1547
A
HOH
1548
5
HOH
HOH
1548
A
HOH
1549
5
HOH
HOH
1549
A
HOH
1550
5
HOH
HOH
1550
A
HOH
1551
5
HOH
HOH
1551
A
HOH
1552
5
HOH
HOH
1552
A
HOH
1553
5
HOH
HOH
1553
A
ILE
1
n
1
ILE
1
A
VAL
2
n
2
VAL
2
A
GLY
3
n
3
GLY
3
A
GLY
4
n
4
GLY
4
A
ARG
5
n
5
ARG
5
A
LYS
6
n
6
LYS
6
A
ALA
7
n
7
ALA
7
A
ARG
8
n
8
ARG
8
A
PRO
9
n
9
PRO
9
A
ARG
10
n
10
ARG
10
A
GLN
11
n
11
GLN
11
A
PHE
12
n
12
PHE
12
A
PRO
13
n
13
PRO
13
A
PHE
14
n
14
PHE
14
A
LEU
15
n
15
LEU
15
A
ALA
16
n
16
ALA
16
A
SER
17
n
17
SER
17
A
ILE
18
n
18
ILE
18
A
GLN
19
n
19
GLN
19
A
ASN
20
n
20
ASN
20
A
GLN
21
n
21
GLN
21
A
GLY
22
n
22
GLY
22
A
SER
23
n
23
SER
23
A
HIS
24
n
24
HIS
24
A
GLU
25
n
25
GLU
25
A
CYS
26
n
26
CYS
26
A
GLY
27
n
27
GLY
27
A
GLY
28
n
28
GLY
28
A
ALA
29
n
29
ALA
29
A
LEU
30
n
30
LEU
30
A
ILE
31
n
31
ILE
31
A
HIS
32
n
32
HIS
32
A
ALA
33
n
33
ALA
33
A
ARG
34
n
34
ARG
34
A
PHE
35
n
35
PHE
35
A
VAL
36
n
36
VAL
36
A
MET
37
n
37
MET
37
A
THR
38
n
38
THR
38
A
ALA
39
n
39
ALA
39
A
ALA
40
n
40
ALA
40
A
SER
41
n
41
SER
41
A
CYS
42
n
42
CYS
42
A
PHE
43
n
43
PHE
43
A
GLN
44
n
44
GLN
44
A
SER
45
n
45
SER
45
A
GLN
46
n
46
GLN
46
A
ASN
47
n
47
ASN
47
A
PRO
48
n
48
PRO
48
A
GLY
49
n
49
GLY
49
A
VAL
50
n
50
VAL
50
A
SER
51
n
51
SER
51
A
THR
52
n
52
THR
52
A
VAL
53
n
53
VAL
53
A
VAL
54
n
54
VAL
54
A
LEU
55
n
55
LEU
55
A
GLY
56
n
56
GLY
56
A
ALA
57
n
57
ALA
57
A
TYR
58
n
58
TYR
58
A
ASP
59
n
59
ASP
59
A
LEU
60
n
60
LEU
60
A
ARG
61
n
61
ARG
61
A
ARG
62
n
62
ARG
62
A
ARG
63
n
63
ARG
63
A
GLU
64
n
64
GLU
64
A
ARG
65
n
65
ARG
65
A
GLN
66
n
66
GLN
66
A
SER
67
n
67
SER
67
A
ARG
68
n
68
ARG
68
A
GLN
69
n
69
GLN
69
A
THR
70
n
70
THR
70
A
PHE
71
n
71
PHE
71
A
SER
72
n
72
SER
72
A
ILE
73
n
73
ILE
73
A
SER
74
n
74
SER
74
A
SER
75
n
75
SER
75
A
MET
76
n
76
MET
76
A
SER
77
n
77
SER
77
A
GLU
78
n
78
GLU
78
A
ASN
79
n
79
ASN
79
A
GLY
80
n
80
GLY
80
A
TYR
81
n
81
TYR
81
A
ASP
82
n
82
ASP
82
A
PRO
83
n
83
PRO
83
A
GLN
84
n
84
GLN
84
A
GLN
85
n
85
GLN
85
A
ASN
86
n
86
ASN
86
A
LEU
87
n
87
LEU
87
A
ASN
88
n
88
ASN
88
A
ASP
89
n
89
ASP
89
A
LEU
90
n
90
LEU
90
A
MET
91
n
91
MET
91
A
LEU
92
n
92
LEU
92
A
LEU
93
n
93
LEU
93
A
GLN
94
n
94
GLN
94
A
LEU
95
n
95
LEU
95
A
ASP
96
n
96
ASP
96
A
ARG
97
n
97
ARG
97
A
GLU
98
n
98
GLU
98
A
ALA
99
n
99
ALA
99
A
ASN
100
n
100
ASN
100
A
LEU
101
n
101
LEU
101
A
THR
102
n
102
THR
102
A
SER
103
n
103
SER
103
A
SER
104
n
104
SER
104
A
VAL
105
n
105
VAL
105
A
THR
106
n
106
THR
106
A
ILE
107
n
107
ILE
107
A
LEU
108
n
108
LEU
108
A
PRO
109
n
109
PRO
109
A
LEU
110
n
110
LEU
110
A
PRO
111
n
111
PRO
111
A
LEU
112
n
112
LEU
112
A
GLN
113
n
113
GLN
113
A
ASN
114
n
114
ASN
114
A
ALA
115
n
115
ALA
115
A
THR
116
n
116
THR
116
A
VAL
117
n
117
VAL
117
A
GLU
118
n
118
GLU
118
A
ALA
119
n
119
ALA
119
A
GLY
120
n
120
GLY
120
A
THR
121
n
121
THR
121
A
ARG
122
n
122
ARG
122
A
CYS
123
n
123
CYS
123
A
GLN
124
n
124
GLN
124
A
VAL
125
n
125
VAL
125
A
ALA
126
n
126
ALA
126
A
GLY
127
n
127
GLY
127
A
TRP
128
n
128
TRP
128
A
GLY
129
n
129
GLY
129
A
SER
130
n
130
SER
130
A
GLN
131
n
131
GLN
131
A
ARG
132
n
132
ARG
132
A
SER
133
n
133
SER
133
A
GLY
134
n
134
GLY
134
A
GLY
135
n
135
GLY
135
A
ARG
136
n
136
ARG
136
A
LEU
137
n
137
LEU
137
A
SER
138
n
138
SER
138
A
ARG
139
n
139
ARG
139
A
PHE
140
n
140
PHE
140
A
PRO
141
n
141
PRO
141
A
ARG
142
n
142
ARG
142
A
PHE
143
n
143
PHE
143
A
VAL
144
n
144
VAL
144
A
ASN
145
n
145
ASN
145
A
VAL
146
n
146
VAL
146
A
THR
147
n
147
THR
147
A
VAL
148
n
148
VAL
148
A
THR
149
n
149
THR
149
A
PRO
150
n
150
PRO
150
A
GLU
151
n
151
GLU
151
A
ASP
152
n
152
ASP
152
A
GLN
153
n
153
GLN
153
A
CYS
154
n
154
CYS
154
A
ARG
155
n
155
ARG
155
A
PRO
156
n
156
PRO
156
A
ASN
157
n
157
ASN
157
A
ASN
158
n
158
ASN
158
A
VAL
159
n
159
VAL
159
A
CYS
160
n
160
CYS
160
A
THR
161
n
161
THR
161
A
GLY
162
n
162
GLY
162
A
VAL
163
n
163
VAL
163
A
LEU
164
n
164
LEU
164
A
THR
165
n
165
THR
165
A
ARG
166
n
166
ARG
166
A
ARG
167
n
167
ARG
167
A
GLY
168
n
168
GLY
168
A
GLY
169
n
169
GLY
169
A
ILE
170
n
170
ILE
170
A
CYS
171
n
171
CYS
171
A
ASN
172
n
172
ASN
172
A
GLY
173
n
173
GLY
173
A
ASP
174
n
174
ASP
174
A
GLY
175
n
175
GLY
175
A
GLY
176
n
176
GLY
176
A
THR
177
n
177
THR
177
A
PRO
178
n
178
PRO
178
A
LEU
179
n
179
LEU
179
A
VAL
180
n
180
VAL
180
A
CYS
181
n
181
CYS
181
A
GLU
182
n
182
GLU
182
A
GLY
183
n
183
GLY
183
A
LEU
184
n
184
LEU
184
A
ALA
185
n
185
ALA
185
A
HIS
186
n
186
HIS
186
A
GLY
187
n
187
GLY
187
A
VAL
188
n
188
VAL
188
A
ALA
189
n
189
ALA
189
A
SER
190
n
190
SER
190
A
PHE
191
n
191
PHE
191
A
SER
192
n
192
SER
192
A
LEU
193
n
193
LEU
193
A
GLY
194
n
194
GLY
194
A
PRO
195
n
195
PRO
195
A
CYS
196
n
196
CYS
196
A
GLY
197
n
197
GLY
197
A
ARG
198
n
198
ARG
198
A
GLY
199
n
199
GLY
199
A
PRO
200
n
200
PRO
200
A
ASP
201
n
201
ASP
201
A
PHE
202
n
202
PHE
202
A
PHE
203
n
203
PHE
203
A
THR
204
n
204
THR
204
A
ARG
205
n
205
ARG
205
A
VAL
206
n
206
VAL
206
A
ALA
207
n
207
ALA
207
A
LEU
208
n
208
LEU
208
A
PHE
209
n
209
PHE
209
A
ARG
210
n
210
ARG
210
A
ASP
211
n
211
ASP
211
A
TRP
212
n
212
TRP
212
A
ILE
213
n
213
ILE
213
A
ASP
214
n
214
ASP
214
A
GLY
215
n
215
GLY
215
A
VAL
216
n
216
VAL
216
A
LEU
217
n
217
LEU
217
A
ASN
218
n
218
ASN
218
A
ASN
219
n
219
ASN
219
A
PRO
220
n
220
PRO
220
A
GLY
221
n
221
GLY
221
A
PRO
222
n
222
PRO
222
A
GLY
223
n
223
GLY
223
A
PRO
224
n
224
PRO
224
A
ALA
225
n
225
ALA
225
A
author_defined_assembly
1
monomeric
A
ASN
145
GLYCOSYLATION SITE
A
ASN
145
ASN
A
ASN
100
GLYCOSYLATION SITE
A
ASN
100
ASN
A
ASN
114
GLYCOSYLATION SITE
A
ASN
114
ASN
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ARG
5
A
O
ARG
5
A
N
PHE
143
A
N
PHE
143
A
O
THR
147
A
O
THR
147
A
N
GLY
162
A
N
GLY
162
A
O
THR
161
A
O
THR
161
A
N
ASP
201
A
N
ASP
201
A
N
THR
204
A
N
THR
204
A
O
VAL
188
A
O
VAL
188
A
N
HIS
186
A
N
HIS
186
A
O
LEU
179
A
O
LEU
179
A
N
VAL
180
A
N
VAL
180
A
O
GLN
124
A
O
GLN
124
A
O
GLY
127
A
O
GLY
127
A
N
ARG
142
A
N
ARG
142
A
O
ASN
20
A
O
ASN
20
A
N
SER
23
A
N
SER
23
A
O
HIS
32
A
O
HIS
32
A
N
PHE
35
A
N
PHE
35
A
N
THR
38
A
N
THR
38
A
O
MET
91
A
O
MET
91
A
O
GLN
94
A
O
GLN
94
A
N
SER
74
A
N
SER
74
A
O
PHE
71
A
O
PHE
71
A
N
VAL
53
A
N
VAL
53
A
N
VAL
54
A
N
VAL
54
A
O
SER
17
A
O
SER
17
1
A
CA
ASN
47
PLANAR
1
B
C1
NAG
2
WRONG HAND
1
A
A
C
CD
GLY
PRO
199
200
1.64
1
A
A
ND2
O5
ASN
NAG
145
1451
1.90
1
A
A
ND2
O5
ASN
NAG
100
1001
1.92
1
B
B
O4
O5
NAG
NAG
1
2
2.00
1
-19.02
2.20
117.20
98.18
A
A
A
CA
C
N
GLN
GLN
ASN
46
46
47
Y
1
23.69
2.00
110.40
134.09
A
A
A
CB
CA
C
ASN
ASN
ASN
47
47
47
N
1
18.76
1.50
119.30
138.06
A
A
A
C
N
CA
ASN
PRO
PRO
47
48
48
Y
1
-22.29
2.10
128.40
106.11
A
A
A
C
N
CD
ASN
PRO
PRO
47
48
48
Y
1
6.21
0.90
118.30
124.51
A
A
A
CB
CG
OD1
ASP
ASP
ASP
59
59
59
N
1
-6.43
0.90
118.30
111.87
A
A
A
CB
CG
OD2
ASP
ASP
ASP
59
59
59
N
1
-6.13
0.90
118.30
112.17
A
A
A
CB
CG
OD2
ASP
ASP
ASP
82
82
82
N
1
5.74
0.90
118.30
124.04
A
A
A
CB
CG
OD1
ASP
ASP
ASP
96
96
96
N
1
-5.75
0.90
118.30
112.55
A
A
A
CB
CG
OD2
ASP
ASP
ASP
96
96
96
N
1
3.06
0.50
120.30
123.36
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
142
142
142
N
1
-3.53
0.50
120.30
116.77
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
142
142
142
N
1
-5.94
0.90
118.30
112.36
A
A
A
CB
CG
OD2
ASP
ASP
ASP
152
152
152
N
1
12.11
1.80
110.60
122.71
A
A
A
N
CA
CB
ARG
ARG
ARG
166
166
166
N
1
11.94
1.90
110.20
122.14
A
A
A
CB
CA
C
LEU
LEU
LEU
193
193
193
N
1
-19.36
2.10
128.40
109.04
A
A
A
C
N
CD
GLY
PRO
PRO
194
195
195
Y
1
13.57
1.50
119.30
132.87
A
A
A
C
N
CA
GLY
PRO
PRO
199
200
200
Y
1
-58.55
2.10
128.40
69.85
A
A
A
C
N
CD
GLY
PRO
PRO
199
200
200
Y
1
7.22
1.20
103.30
110.52
A
A
A
N
CA
CB
PRO
PRO
PRO
200
200
200
N
1
A
A
CD
OE2
GLU
GLU
25
25
0.068
0.011
1.252
1.320
N
1
A
A
CD
OE2
GLU
GLU
118
118
0.068
0.011
1.252
1.320
N
1
A
A
CD
OE2
GLU
GLU
151
151
0.068
0.011
1.252
1.320
N
1
A
ALA
33
-50.97
-5.84
1
A
GLN
44
-65.18
-152.59
1
A
SER
45
-135.24
-137.18
1
A
GLN
46
85.44
56.30
1
A
ASN
47
102.08
54.88
1
A
PRO
48
-13.01
-57.23
1
A
VAL
50
-73.76
21.71
1
A
TYR
58
-144.26
-73.80
1
A
GLU
64
35.43
51.73
1
A
SER
67
-132.55
-30.72
1
A
CYS
154
-106.30
-151.56
1
A
ARG
167
68.29
101.52
1
A
CYS
196
-37.04
134.66
1
A
PRO
200
65.52
101.88
1
A
PRO
222
-56.41
0.91
0.294
0.207
2.5
20.0
901
9554
9554
98.2
Random
1
1
1
TNT PROTGEO
2.5
20.0
53
1809
59
0
1697
2.6
0.014
49.7
2.5
20.0
1FY1
9554
9554
0
0
0.085
1
10.2
3.4
98.2
0.33
2.50
2.54
463
1
3.5
99.4
data reduction
DENZO
data scaling
SCALEPACK
refinement
TNT
phasing
TNT
[R23S,F25E]HBP, A MUTANT OF HUMAN HEPARIN BINDING PROTEIN (CAP37)
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
5
N
N
The biological unit is a monomer
A
ALA
39
A
ALA
39
HELX_P
A
GLN
44
A
GLN
44
5
1
6
A
PRO
150
A
PRO
150
HELX_P
A
CYS
154
A
CYS
154
5
2
5
A
VAL
206
A
VAL
206
HELX_P
A
LEU
208
A
LEU
208
5
3
3
A
PHE
209
A
PHE
209
HELX_P
A
ASN
219
A
ASN
219
1
4
11
disulf
2.052
A
CYS
26
A
SG
CYS
26
1_555
A
CYS
42
A
SG
CYS
42
1_555
disulf
2.041
A
CYS
123
A
SG
CYS
123
1_555
A
CYS
181
A
SG
CYS
181
1_555
disulf
2.030
A
CYS
154
A
SG
CYS
154
1_555
A
CYS
160
A
SG
CYS
160
1_555
disulf
2.054
A
CYS
171
A
SG
CYS
171
1_555
A
CYS
196
A
SG
CYS
196
1_555
covale
1.450
one
N-Glycosylation
A
ASN
100
A
ND2
ASN
100
1_555
A
NAG
1001
C
C1
NAG
1_555
covale
1.470
one
N-Glycosylation
A
ASN
114
A
ND2
ASN
114
1_555
B
NAG
1
B
C1
NAG
1_555
covale
1.440
one
N-Glycosylation
A
ASN
145
A
ND2
ASN
145
1_555
A
NAG
1451
D
C1
NAG
1_555
covale
1.449
both
B
NAG
1
B
O4
NAG
1_555
B
NAG
2
B
C1
NAG
1_555
ANTIMICROBIAL PROTEIN
Serine protease homolog, Endotoxin (lipid A) binding site, ANTIMICROBIAL PROTEIN
CAP7_HUMAN
UNP
1
27
P20160
IVGGRKARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENG
YDPQQNLNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQCRPNNVC
TGVLTRRGGICNGDGGTPLVCEGLAHGVASFSLGPCGRGPDFFTRVALFRDWIDGVLNNPGPGPA
27
251
1FY1
1
225
P20160
A
1
1
225
1
ARG
engineered mutation
SER
23
1FY1
A
P20160
UNP
49
23
1
PHE
engineered mutation
GLU
25
1FY1
A
P20160
UNP
51
25
8
7
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ARG
5
A
ARG
5
A
LYS
6
A
LYS
6
A
ARG
142
A
ARG
142
A
VAL
148
A
VAL
148
A
ASN
158
A
ASN
158
A
GLY
162
A
GLY
162
A
ASP
201
A
ASP
201
A
THR
204
A
THR
204
A
LEU
184
A
LEU
184
A
SER
192
A
SER
192
A
PRO
178
A
PRO
178
A
CYS
181
A
CYS
181
A
ARG
122
A
ARG
122
A
GLY
127
A
GLY
127
A
ARG
142
A
ARG
142
A
VAL
148
A
VAL
148
A
LEU
15
A
LEU
15
A
ASN
20
A
ASN
20
A
SER
23
A
SER
23
A
HIS
32
A
HIS
32
A
PHE
35
A
PHE
35
A
THR
38
A
THR
38
A
MET
91
A
MET
91
A
LEU
95
A
LEU
95
A
GLN
69
A
GLN
69
A
SER
77
A
SER
77
A
THR
52
A
THR
52
A
LEU
55
A
LEU
55
A
LEU
15
A
LEU
15
A
ASN
20
A
ASN
20
19
P 21 21 21