0.009872 0.005699 0.000000 0.000000 0.011399 0.000000 0.000000 0.000000 0.007252 0.00000 0.00000 0.00000 Xu, Y. Tao, X. Shen, B. Horng, T. Medzhitov, R. Manley, J.L. Tong, L. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90 90 120 101.3 101.3 137.9 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Nature NATUAS 0006 0028-0836 408 111 115 10.1038/35047056 11081518 Structural basis for signal transduction by the Toll/interleukin-1 receptor domains. 2000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 100 1 CCD 1999-11-12 ADSC QUANTUM 4 CCD 2000-01-20 ADSC QUANTUM 4 SINGLE WAVELENGTH M x-ray 1 0.98 1.0 0.909 1.0 X4A NSLS 0.98 SYNCHROTRON NSLS BEAMLINE X4A A1 CHESS 0.909 SYNCHROTRON CHESS BEAMLINE A1 19081.670 TOLL-LIKE RECEPTOR 1 TIR DOMAIN 1 man polymer no yes NIPLEELQRNLQFHAFISYSGHDSFWVKNELLPNLEKEG(MSE)QICLHERNFVPGKSIVENIITCIEKSYKSIFVLSPN FVQSEWCHYELYFAHHNLFHEGSNSLILILLEPIPQYSIPSSYHKLKSL(MSE)ARRTYLEWPKEKSKRGLFWANLRAAI NIKLTEQAK NIPLEELQRNLQFHAFISYSGHDSFWVKNELLPNLEKEGMQICLHERNFVPGKSIVENIITCIEKSYKSIFVLSPNFVQS EWCHYELYFAHHNLFHEGSNSLILILLEPIPQYSIPSSYHKLKSLMARRTYLEWPKEKSKRGLFWANLRAAINIKLTEQA K A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample 9606 Homo sapiens 562 Escherichia coli 1 5.35 77.02 VAPOR DIFFUSION, HANGING DROP 8.0 100 mM Tris, 1.2M NaH2PO4/K2HPO4 5 mM DTT, 20% glycerol, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 21K 294.0 exptl_crystal_grow pdbx_unobs_or_zero_occ_atoms pdbx_unobs_or_zero_occ_residues repository Initial release Version format compliance Version format compliance Advisory Experimental preparation 1 0 2000-11-22 1 1 2008-04-27 1 2 2011-07-13 1 3 2018-01-31 _exptl_crystal_grow.pdbx_details _exptl_crystal_grow.temp RCSB Y RCSB 2000-10-03 REL ASN 625 n 1 ASN 625 A ILE 626 n 2 ILE 626 A PRO 627 n 3 PRO 627 A LEU 628 n 4 LEU 628 A GLU 629 n 5 GLU 629 A GLU 630 n 6 GLU 630 A LEU 631 n 7 LEU 631 A GLN 632 n 8 GLN 632 A ARG 633 n 9 ARG 633 A ASN 634 n 10 ASN 634 A LEU 635 n 11 LEU 635 A GLN 636 n 12 GLN 636 A PHE 637 n 13 PHE 637 A HIS 638 n 14 HIS 638 A ALA 639 n 15 ALA 639 A PHE 640 n 16 PHE 640 A ILE 641 n 17 ILE 641 A SER 642 n 18 SER 642 A TYR 643 n 19 TYR 643 A SER 644 n 20 SER 644 A GLY 645 n 21 GLY 645 A HIS 646 n 22 HIS 646 A ASP 647 n 23 ASP 647 A SER 648 n 24 SER 648 A PHE 649 n 25 PHE 649 A TRP 650 n 26 TRP 650 A VAL 651 n 27 VAL 651 A LYS 652 n 28 LYS 652 A ASN 653 n 29 ASN 653 A GLU 654 n 30 GLU 654 A LEU 655 n 31 LEU 655 A LEU 656 n 32 LEU 656 A PRO 657 n 33 PRO 657 A ASN 658 n 34 ASN 658 A LEU 659 n 35 LEU 659 A GLU 660 n 36 GLU 660 A LYS 661 n 37 LYS 661 A GLU 662 n 38 GLU 662 A GLY 663 n 39 GLY 663 A MSE 664 n 40 MSE 664 A GLN 665 n 41 GLN 665 A ILE 666 n 42 ILE 666 A CYS 667 n 43 CYS 667 A LEU 668 n 44 LEU 668 A HIS 669 n 45 HIS 669 A GLU 670 n 46 GLU 670 A ARG 671 n 47 ARG 671 A ASN 672 n 48 ASN 672 A PHE 673 n 49 PHE 673 A VAL 674 n 50 VAL 674 A PRO 675 n 51 PRO 675 A GLY 676 n 52 GLY 676 A LYS 677 n 53 LYS 677 A SER 678 n 54 SER 678 A ILE 679 n 55 ILE 679 A VAL 680 n 56 VAL 680 A GLU 681 n 57 GLU 681 A ASN 682 n 58 ASN 682 A ILE 683 n 59 ILE 683 A ILE 684 n 60 ILE 684 A THR 685 n 61 THR 685 A CYS 686 n 62 CYS 686 A ILE 687 n 63 ILE 687 A GLU 688 n 64 GLU 688 A LYS 689 n 65 LYS 689 A SER 690 n 66 SER 690 A TYR 691 n 67 TYR 691 A LYS 692 n 68 LYS 692 A SER 693 n 69 SER 693 A ILE 694 n 70 ILE 694 A PHE 695 n 71 PHE 695 A VAL 696 n 72 VAL 696 A LEU 697 n 73 LEU 697 A SER 698 n 74 SER 698 A PRO 699 n 75 PRO 699 A ASN 700 n 76 ASN 700 A PHE 701 n 77 PHE 701 A VAL 702 n 78 VAL 702 A GLN 703 n 79 GLN 703 A SER 704 n 80 SER 704 A GLU 705 n 81 GLU 705 A TRP 706 n 82 TRP 706 A CYS 707 n 83 CYS 707 A HIS 708 n 84 HIS 708 A TYR 709 n 85 TYR 709 A GLU 710 n 86 GLU 710 A LEU 711 n 87 LEU 711 A TYR 712 n 88 TYR 712 A PHE 713 n 89 PHE 713 A ALA 714 n 90 ALA 714 A HIS 715 n 91 HIS 715 A HIS 716 n 92 HIS 716 A ASN 717 n 93 ASN 717 A LEU 718 n 94 LEU 718 A PHE 719 n 95 PHE 719 A HIS 720 n 96 HIS 720 A GLU 721 n 97 GLU 721 A GLY 722 n 98 GLY 722 A SER 723 n 99 SER 723 A ASN 724 n 100 ASN 724 A SER 725 n 101 SER 725 A LEU 726 n 102 LEU 726 A ILE 727 n 103 ILE 727 A LEU 728 n 104 LEU 728 A ILE 729 n 105 ILE 729 A LEU 730 n 106 LEU 730 A LEU 731 n 107 LEU 731 A GLU 732 n 108 GLU 732 A PRO 733 n 109 PRO 733 A ILE 734 n 110 ILE 734 A PRO 735 n 111 PRO 735 A GLN 736 n 112 GLN 736 A TYR 737 n 113 TYR 737 A SER 738 n 114 SER 738 A ILE 739 n 115 ILE 739 A PRO 740 n 116 PRO 740 A SER 741 n 117 SER 741 A SER 742 n 118 SER 742 A TYR 743 n 119 TYR 743 A HIS 744 n 120 HIS 744 A LYS 745 n 121 LYS 745 A LEU 746 n 122 LEU 746 A LYS 747 n 123 LYS 747 A SER 748 n 124 SER 748 A LEU 749 n 125 LEU 749 A MSE 750 n 126 MSE 750 A ALA 751 n 127 ALA 751 A ARG 752 n 128 ARG 752 A ARG 753 n 129 ARG 753 A THR 754 n 130 THR 754 A TYR 755 n 131 TYR 755 A LEU 756 n 132 LEU 756 A GLU 757 n 133 GLU 757 A TRP 758 n 134 TRP 758 A PRO 759 n 135 PRO 759 A LYS 760 n 136 LYS 760 A GLU 761 n 137 GLU 761 A LYS 762 n 138 LYS 762 A SER 763 n 139 SER 763 A LYS 764 n 140 LYS 764 A ARG 765 n 141 ARG 765 A GLY 766 n 142 GLY 766 A LEU 767 n 143 LEU 767 A PHE 768 n 144 PHE 768 A TRP 769 n 145 TRP 769 A ALA 770 n 146 ALA 770 A ASN 771 n 147 ASN 771 A LEU 772 n 148 LEU 772 A ARG 773 n 149 ARG 773 A ALA 774 n 150 ALA 774 A ALA 775 n 151 ALA 775 A ILE 776 n 152 ILE 776 A ASN 777 n 153 ASN 777 A ILE 778 n 154 ILE 778 A LYS 779 n 155 LYS 779 A LEU 780 n 156 LEU 780 A THR 781 n 157 THR 781 A GLU 782 n 158 GLU 782 A GLN 783 n 159 GLN 783 A ALA 784 n 160 ALA 784 A LYS 785 n 161 LYS 785 A author_defined_assembly 1 monomeric A MSE 664 SELENOMETHIONINE A MSE 40 MET A MSE 750 SELENOMETHIONINE A MSE 126 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N CYS 667 A N CYS 43 A O ALA 639 A O ALA 15 A O PHE 637 A O PHE 13 A N TYR 691 A N TYR 67 A O SER 693 A O SER 69 A N ILE 727 A N ILE 103 A N LEU 730 A N LEU 106 A O LEU 756 A O LEU 132 1 A ILE 626 -35.99 127.24 1 A LEU 628 -39.43 -30.01 1 A GLU 630 -56.68 16.59 1 A GLN 632 -47.85 -70.81 1 A ASN 634 -105.00 61.72 1 A HIS 669 -51.82 -6.52 1 A ASN 672 -93.65 32.96 1 A LEU 718 -133.25 -33.96 1 A HIS 720 -58.97 174.15 1 A SER 723 -65.99 -179.01 1 A ARG 752 -52.19 -9.31 1 A ARG 753 42.28 72.93 1 A ALA 784 55.91 -98.74 0.296 0.254 0.26 0.254 2.9 20 600 9700 8496 7.5% 1 1 2 Engh & Huber 2.9 20 0 1342 0 0 1342 0.008 1.4 35 2.9 40 1FYV 9700 9374 .5 1 0.048 1 40 5 97 0.17 2.9 3.0 3 91 data reduction DENZO data scaling SCALEPACK phasing MADSYS refinement CNS TOLL-LIKE RECEPTOR 1 CRYSTAL STRUCTURE OF THE TIR DOMAIN OF HUMAN TLR1 1 N N A SER 644 A SER 20 HELX_P A HIS 646 A HIS 22 5 1 3 A ASP 647 A ASP 23 HELX_P A GLU 654 A GLU 30 1 2 8 A GLU 654 A GLU 30 HELX_P A LYS 661 A LYS 37 1 3 8 A SER 678 A SER 54 HELX_P A LYS 689 A LYS 65 1 4 12 A SER 698 A SER 74 HELX_P A GLU 705 A GLU 81 1 5 8 A TRP 706 A TRP 82 HELX_P A PHE 713 A PHE 89 1 6 8 A PRO 735 A PRO 111 HELX_P A ILE 739 A ILE 115 5 7 5 A TYR 743 A TYR 119 HELX_P A ARG 752 A ARG 128 1 8 10 A GLU 761 A GLU 137 HELX_P A ARG 765 A ARG 141 5 9 5 A GLY 766 A GLY 142 HELX_P A ILE 778 A ILE 154 1 10 13 disulf 2.006 A CYS 667 A SG CYS 43 1_555 A CYS 686 A SG CYS 62 1_555 covale 1.322 A GLY 663 A C GLY 39 1_555 A MSE 664 A N MSE 40 1_555 covale 1.329 A MSE 664 A C MSE 40 1_555 A GLN 665 A N GLN 41 1_555 covale 1.323 A LEU 749 A C LEU 125 1_555 A MSE 750 A N MSE 126 1_555 covale 1.330 A MSE 750 A C MSE 126 1_555 A ALA 751 A N ALA 127 1_555 SIGNALING PROTEIN beta-alpha-beta fold parallel beta sheet, SIGNALING PROTEIN TLR1_HUMAN UNP 1 625 Q15399 NIPLEELQRNLQFHAFISYSGHDSFWVKNELLPNLEKEGMQICLHERNFVPGKSIVENIITCIEKSYKSIFVLSPNFVQS EWCHYELYFAHHNLFHEGSNSLILILLEPIPQYSIPSSYHKLKSLMARRTYLEWPKEKSKRGLFWANLRAAINIKLTEQA K 625 785 1FYV 625 785 Q15399 A 1 1 161 1 MET MODIFIED RESIDUE MSE 664 1FYV A Q15399 UNP 664 40 1 MET MODIFIED RESIDUE MSE 750 1FYV A Q15399 UNP 750 126 5 parallel parallel parallel parallel A ILE 666 A ILE 42 A CYS 667 A CYS 43 A PHE 637 A PHE 13 A SER 642 A SER 18 A SER 690 A SER 66 A LEU 697 A LEU 73 A LEU 726 A LEU 102 A LEU 730 A LEU 106 A LEU 756 A LEU 132 A GLU 757 A GLU 133 181 P 64 2 2