0.007336
0.000000
0.000000
0.000000
0.011448
0.000000
0.000000
0.000000
0.022137
0.00000
0.00000
0.00000
Rudolph, M.G.
Speir, J.A.
Brunmark, A.
Mattsson, N.
Jackson, M.R.
Peterson, P.A.
Teyton, L.
Wilson, I.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
136.31
87.35
45.17
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O3 S
137.158
n
S-HYDROXYCYSTEINE
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C6 H12 O5
164.156
beta-L-fucopyranose
beta-L-fucose; 6-deoxy-beta-L-galactopyranose; L-fucose; fucose; 6-DEOXY-BETA-L-GALACTOSE
L-saccharide, beta linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C6 H14 O2
118.174
(4S)-2-METHYL-2,4-PENTANEDIOL
non-polymer
C6 H14 O2
118.174
(4R)-2-METHYLPENTANE-2,4-DIOL
non-polymer
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
O4 P -3
94.971
PHOSPHATE ION
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Immunity
IUNIEH
2048
1074-7613
14
231
242
10.1016/S1074-7613(01)00105-4
11290333
The crystal structures of K(bm1) and K(bm8) reveal that subtle changes in the peptide environment impact thermostability and alloreactivity.
2001
10.2210/pdb1fzo/pdb
pdb_00001fzo
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
CUSTOM-MADE
SINGLE WAVELENGTH
M
x-ray
1
1.0
19-ID
APS
SYNCHROTRON
APS BEAMLINE 19-ID
31587.264
H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, K-B ALPHA CHAIN
EXTRACELLULAR DOMAIN
Y22F, M23I, E24S, D30N
1
man
polymer
11704.359
PROTEIN (BETA-2-MICROGLOBULIN)
1
man
polymer
949.060
PROTEIN (NUCLEOCAPSID PROTEIN)
RESIDUES 324-332
1
syn
polymer
367.349
beta-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose
1
man
branched
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
1
man
non-polymer
118.174
(4R)-2-METHYLPENTANE-2,4-DIOL
1
syn
non-polymer
118.174
(4S)-2-METHYL-2,4-PENTANEDIOL
2
syn
non-polymer
94.971
PHOSPHATE ION
1
syn
non-polymer
18.015
water
352
nat
water
SEV9
no
yes
GPHSLRYFVTAVSRPGLGEPRFISVGYVDNTEFVRFDSDAENPRYEPRARWMEQEGPEYWERETQKAKGNEQSFRVDLRT
LLGYYNQSKGGSHTIQVISGCEVGSDGRLLRGYQQYAYDG(CSO)DYIALNEDLKTWTAADMAALITKHKWEQAGEAERL
RAYLEGTCVEWLRRYLKNGNATLLRTDSPKAHVTHHSRPEDKVTLRCWALGFYPADITLTWQLNGEELIQDMELVETRPA
GDGTFQKWASVVVPLGKEQYYTCHVYHQGLPEPLTLRW
GPHSLRYFVTAVSRPGLGEPRFISVGYVDNTEFVRFDSDAENPRYEPRARWMEQEGPEYWERETQKAKGNEQSFRVDLRT
LLGYYNQSKGGSHTIQVISGCEVGSDGRLLRGYQQYAYDGCDYIALNEDLKTWTAADMAALITKHKWEQAGEAERLRAYL
EGTCVEWLRRYLKNGNATLLRTDSPKAHVTHHSRPEDKVTLRCWALGFYPADITLTWQLNGEELIQDMELVETRPAGDGT
FQKWASVVVPLGKEQYYTCHVYHQGLPEPLTLRW
A
polypeptide(L)
no
no
IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYAC
RVKHDSMAEPKTVYWDRDM
IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYAC
RVKHDSMAEPKTVYWDRDM
B
polypeptide(L)
no
no
FAPGNYPAL
FAPGNYPAL
P
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
fruit fly
Drosophila
sample
10090
Mus musculus
7227
Drosophila melanogaster
house mouse
Mus
fruit fly
Drosophila
sample
10090
Mus musculus
7227
Drosophila melanogaster
1
3.0
58
VAPOR DIFFUSION, SITTING DROP
6.40
K/Na phosphate, MPD , pH 6.40, VAPOR DIFFUSION, SITTING DROP, temperature 290K
290
atom_site
chem_comp
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
struct_asym
struct_conn
struct_ref_seq_dif
struct_site
struct_site_gen
chem_comp
database_2
struct_ref_seq_dif
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Non-polymer description
Version format compliance
Atomic model
Data collection
Database references
Derived calculations
Structure summary
Database references
Structure summary
1
0
2001-03-28
1
1
2008-04-27
1
2
2011-07-13
2
0
2020-07-29
2
1
2021-11-03
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.type_symbol
_chem_comp.name
_chem_comp.type
_entity.formula_weight
_entity.pdbx_description
_entity.pdbx_number_of_molecules
_entity.type
_pdbx_struct_assembly_gen.asym_id_list
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
Q
NAG
600
n
C
NAG
1
Q
FUC
602
n
C
FUL
2
LFucpb
b-L-fucopyranose
b-L-Fucp
Fuc
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
RCSB
Y
RCSB
2000-10-03
REL
REL
oligosaccharide
LFucpb1-6DGlcpNAcb1-
4
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/2,2,1/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1b_1-5]/1-2/a6-b1
4
PDB2Glycan
1.1.0
WURCS
[]{[(4+1)][b-D-GlcpNAc]{[(6+1)][b-L-Fucp]{}}}
4
PDB-CARE
LINUCS
C1
O6
FUL
NAG
2
1
4
O1
HO6
sing
n
n
NAG
2-acetamido-2-deoxy-beta-D-glucopyranose
MRD
(4R)-2-METHYLPENTANE-2,4-DIOL
MPD
(4S)-2-METHYL-2,4-PENTANEDIOL
PO4
PHOSPHATE ION
HOH
water
The peptide was chemically synthesized. The sequence of the peptide is found naturally in Sendai virus.
sample
NAG
500
5
NAG
NAG
500
A
MPD
1
6
MRD
MRD
701
A
MPD
2
7
MPD
MPD
702
A
PO4
2
8
PO4
PO4
802
B
MPD
3
7
MPD
MPD
703
B
WAT
1
9
HOH
HOH
703
A
WAT
2
9
HOH
HOH
704
A
WAT
4
9
HOH
HOH
705
A
WAT
5
9
HOH
HOH
706
A
WAT
6
9
HOH
HOH
707
A
WAT
7
9
HOH
HOH
708
A
WAT
8
9
HOH
HOH
709
A
WAT
10
9
HOH
HOH
710
A
WAT
11
9
HOH
HOH
711
A
WAT
12
9
HOH
HOH
712
A
WAT
14
9
HOH
HOH
713
A
WAT
15
9
HOH
HOH
714
A
WAT
16
9
HOH
HOH
715
A
WAT
19
9
HOH
HOH
716
A
WAT
21
9
HOH
HOH
717
A
WAT
23
9
HOH
HOH
718
A
WAT
24
9
HOH
HOH
719
A
WAT
25
9
HOH
HOH
720
A
WAT
26
9
HOH
HOH
721
A
WAT
27
9
HOH
HOH
722
A
WAT
28
9
HOH
HOH
723
A
WAT
29
9
HOH
HOH
724
A
WAT
30
9
HOH
HOH
725
A
WAT
31
9
HOH
HOH
726
A
WAT
32
9
HOH
HOH
727
A
WAT
34
9
HOH
HOH
728
A
WAT
35
9
HOH
HOH
729
A
WAT
36
9
HOH
HOH
730
A
WAT
38
9
HOH
HOH
731
A
WAT
39
9
HOH
HOH
732
A
WAT
42
9
HOH
HOH
733
A
WAT
44
9
HOH
HOH
734
A
WAT
48
9
HOH
HOH
735
A
WAT
49
9
HOH
HOH
736
A
WAT
50
9
HOH
HOH
737
A
WAT
51
9
HOH
HOH
738
A
WAT
53
9
HOH
HOH
739
A
WAT
54
9
HOH
HOH
740
A
WAT
55
9
HOH
HOH
741
A
WAT
58
9
HOH
HOH
742
A
WAT
59
9
HOH
HOH
743
A
WAT
60
9
HOH
HOH
744
A
WAT
61
9
HOH
HOH
745
A
WAT
63
9
HOH
HOH
746
A
WAT
65
9
HOH
HOH
747
A
WAT
67
9
HOH
HOH
748
A
WAT
68
9
HOH
HOH
749
A
WAT
70
9
HOH
HOH
750
A
WAT
71
9
HOH
HOH
751
A
WAT
72
9
HOH
HOH
752
A
WAT
74
9
HOH
HOH
753
A
WAT
75
9
HOH
HOH
754
A
WAT
76
9
HOH
HOH
755
A
WAT
77
9
HOH
HOH
756
A
WAT
78
9
HOH
HOH
757
A
WAT
80
9
HOH
HOH
758
A
WAT
82
9
HOH
HOH
759
A
WAT
83
9
HOH
HOH
760
A
WAT
84
9
HOH
HOH
761
A
WAT
85
9
HOH
HOH
762
A
WAT
86
9
HOH
HOH
763
A
WAT
88
9
HOH
HOH
764
A
WAT
89
9
HOH
HOH
765
A
WAT
91
9
HOH
HOH
766
A
WAT
93
9
HOH
HOH
767
A
WAT
95
9
HOH
HOH
768
A
WAT
97
9
HOH
HOH
769
A
WAT
99
9
HOH
HOH
770
A
WAT
100
9
HOH
HOH
771
A
WAT
101
9
HOH
HOH
772
A
WAT
102
9
HOH
HOH
773
A
WAT
103
9
HOH
HOH
774
A
WAT
104
9
HOH
HOH
775
A
WAT
105
9
HOH
HOH
776
A
WAT
106
9
HOH
HOH
777
A
WAT
109
9
HOH
HOH
778
A
WAT
110
9
HOH
HOH
779
A
WAT
111
9
HOH
HOH
780
A
WAT
112
9
HOH
HOH
781
A
WAT
113
9
HOH
HOH
782
A
WAT
117
9
HOH
HOH
783
A
WAT
119
9
HOH
HOH
784
A
WAT
120
9
HOH
HOH
785
A
WAT
121
9
HOH
HOH
786
A
WAT
123
9
HOH
HOH
787
A
WAT
124
9
HOH
HOH
788
A
WAT
126
9
HOH
HOH
789
A
WAT
128
9
HOH
HOH
790
A
WAT
129
9
HOH
HOH
791
A
WAT
130
9
HOH
HOH
792
A
WAT
131
9
HOH
HOH
793
A
WAT
132
9
HOH
HOH
794
A
WAT
133
9
HOH
HOH
795
A
WAT
137
9
HOH
HOH
796
A
WAT
138
9
HOH
HOH
797
A
WAT
140
9
HOH
HOH
798
A
WAT
142
9
HOH
HOH
799
A
WAT
143
9
HOH
HOH
800
A
WAT
146
9
HOH
HOH
801
A
WAT
147
9
HOH
HOH
802
A
WAT
148
9
HOH
HOH
803
A
WAT
150
9
HOH
HOH
804
A
WAT
151
9
HOH
HOH
805
A
WAT
152
9
HOH
HOH
806
A
WAT
153
9
HOH
HOH
807
A
WAT
154
9
HOH
HOH
808
A
WAT
155
9
HOH
HOH
809
A
WAT
156
9
HOH
HOH
810
A
WAT
157
9
HOH
HOH
811
A
WAT
159
9
HOH
HOH
812
A
WAT
160
9
HOH
HOH
813
A
WAT
161
9
HOH
HOH
814
A
WAT
164
9
HOH
HOH
815
A
WAT
165
9
HOH
HOH
816
A
WAT
166
9
HOH
HOH
817
A
WAT
167
9
HOH
HOH
818
A
WAT
168
9
HOH
HOH
819
A
WAT
169
9
HOH
HOH
820
A
WAT
170
9
HOH
HOH
821
A
WAT
171
9
HOH
HOH
822
A
WAT
172
9
HOH
HOH
823
A
WAT
173
9
HOH
HOH
824
A
WAT
174
9
HOH
HOH
825
A
WAT
175
9
HOH
HOH
826
A
WAT
176
9
HOH
HOH
827
A
WAT
177
9
HOH
HOH
828
A
WAT
178
9
HOH
HOH
829
A
WAT
184
9
HOH
HOH
830
A
WAT
185
9
HOH
HOH
831
A
WAT
187
9
HOH
HOH
832
A
WAT
188
9
HOH
HOH
833
A
WAT
189
9
HOH
HOH
834
A
WAT
190
9
HOH
HOH
835
A
WAT
191
9
HOH
HOH
836
A
WAT
192
9
HOH
HOH
837
A
WAT
193
9
HOH
HOH
838
A
WAT
196
9
HOH
HOH
839
A
WAT
197
9
HOH
HOH
840
A
WAT
198
9
HOH
HOH
841
A
WAT
199
9
HOH
HOH
842
A
WAT
200
9
HOH
HOH
843
A
WAT
202
9
HOH
HOH
844
A
WAT
203
9
HOH
HOH
845
A
WAT
204
9
HOH
HOH
846
A
WAT
205
9
HOH
HOH
847
A
WAT
207
9
HOH
HOH
848
A
WAT
209
9
HOH
HOH
849
A
WAT
211
9
HOH
HOH
850
A
WAT
212
9
HOH
HOH
851
A
WAT
213
9
HOH
HOH
852
A
WAT
214
9
HOH
HOH
853
A
WAT
216
9
HOH
HOH
854
A
WAT
218
9
HOH
HOH
855
A
WAT
219
9
HOH
HOH
856
A
WAT
220
9
HOH
HOH
857
A
WAT
222
9
HOH
HOH
858
A
WAT
223
9
HOH
HOH
859
A
WAT
224
9
HOH
HOH
860
A
WAT
225
9
HOH
HOH
861
A
WAT
226
9
HOH
HOH
862
A
WAT
228
9
HOH
HOH
863
A
WAT
229
9
HOH
HOH
864
A
WAT
230
9
HOH
HOH
865
A
WAT
235
9
HOH
HOH
866
A
WAT
236
9
HOH
HOH
867
A
WAT
237
9
HOH
HOH
868
A
WAT
238
9
HOH
HOH
869
A
WAT
239
9
HOH
HOH
870
A
WAT
240
9
HOH
HOH
871
A
WAT
241
9
HOH
HOH
872
A
WAT
242
9
HOH
HOH
873
A
WAT
244
9
HOH
HOH
874
A
WAT
246
9
HOH
HOH
875
A
WAT
249
9
HOH
HOH
876
A
WAT
250
9
HOH
HOH
877
A
WAT
251
9
HOH
HOH
878
A
WAT
252
9
HOH
HOH
879
A
WAT
255
9
HOH
HOH
880
A
WAT
256
9
HOH
HOH
881
A
WAT
257
9
HOH
HOH
882
A
WAT
259
9
HOH
HOH
883
A
WAT
260
9
HOH
HOH
884
A
WAT
262
9
HOH
HOH
885
A
WAT
263
9
HOH
HOH
886
A
WAT
264
9
HOH
HOH
887
A
WAT
267
9
HOH
HOH
888
A
WAT
268
9
HOH
HOH
889
A
WAT
269
9
HOH
HOH
890
A
WAT
270
9
HOH
HOH
891
A
WAT
272
9
HOH
HOH
892
A
WAT
273
9
HOH
HOH
893
A
WAT
274
9
HOH
HOH
894
A
WAT
275
9
HOH
HOH
895
A
WAT
277
9
HOH
HOH
896
A
WAT
278
9
HOH
HOH
897
A
WAT
279
9
HOH
HOH
898
A
WAT
280
9
HOH
HOH
899
A
WAT
281
9
HOH
HOH
900
A
WAT
282
9
HOH
HOH
901
A
WAT
286
9
HOH
HOH
902
A
WAT
287
9
HOH
HOH
903
A
WAT
288
9
HOH
HOH
904
A
WAT
289
9
HOH
HOH
905
A
WAT
290
9
HOH
HOH
906
A
WAT
291
9
HOH
HOH
907
A
WAT
293
9
HOH
HOH
908
A
WAT
294
9
HOH
HOH
909
A
WAT
295
9
HOH
HOH
910
A
WAT
297
9
HOH
HOH
911
A
WAT
299
9
HOH
HOH
912
A
WAT
302
9
HOH
HOH
913
A
WAT
303
9
HOH
HOH
914
A
WAT
304
9
HOH
HOH
915
A
WAT
305
9
HOH
HOH
916
A
WAT
306
9
HOH
HOH
917
A
WAT
307
9
HOH
HOH
918
A
WAT
308
9
HOH
HOH
919
A
WAT
309
9
HOH
HOH
920
A
WAT
310
9
HOH
HOH
921
A
WAT
312
9
HOH
HOH
922
A
WAT
313
9
HOH
HOH
923
A
WAT
314
9
HOH
HOH
924
A
WAT
315
9
HOH
HOH
925
A
WAT
316
9
HOH
HOH
926
A
WAT
318
9
HOH
HOH
927
A
WAT
321
9
HOH
HOH
928
A
WAT
323
9
HOH
HOH
929
A
WAT
324
9
HOH
HOH
930
A
WAT
325
9
HOH
HOH
931
A
WAT
326
9
HOH
HOH
932
A
WAT
327
9
HOH
HOH
933
A
WAT
329
9
HOH
HOH
934
A
WAT
330
9
HOH
HOH
935
A
WAT
332
9
HOH
HOH
936
A
WAT
333
9
HOH
HOH
937
A
WAT
335
9
HOH
HOH
938
A
WAT
337
9
HOH
HOH
939
A
WAT
339
9
HOH
HOH
940
A
WAT
342
9
HOH
HOH
941
A
WAT
343
9
HOH
HOH
942
A
WAT
345
9
HOH
HOH
943
A
WAT
346
9
HOH
HOH
944
A
WAT
347
9
HOH
HOH
945
A
WAT
348
9
HOH
HOH
946
A
WAT
349
9
HOH
HOH
947
A
WAT
350
9
HOH
HOH
948
A
WAT
351
9
HOH
HOH
949
A
WAT
352
9
HOH
HOH
950
A
WAT
3
9
HOH
HOH
803
B
WAT
9
9
HOH
HOH
804
B
WAT
18
9
HOH
HOH
805
B
WAT
20
9
HOH
HOH
806
B
WAT
22
9
HOH
HOH
807
B
WAT
33
9
HOH
HOH
808
B
WAT
37
9
HOH
HOH
809
B
WAT
40
9
HOH
HOH
810
B
WAT
41
9
HOH
HOH
811
B
WAT
43
9
HOH
HOH
812
B
WAT
46
9
HOH
HOH
813
B
WAT
47
9
HOH
HOH
814
B
WAT
52
9
HOH
HOH
815
B
WAT
62
9
HOH
HOH
816
B
WAT
64
9
HOH
HOH
817
B
WAT
66
9
HOH
HOH
818
B
WAT
69
9
HOH
HOH
819
B
WAT
73
9
HOH
HOH
820
B
WAT
79
9
HOH
HOH
821
B
WAT
81
9
HOH
HOH
822
B
WAT
87
9
HOH
HOH
823
B
WAT
90
9
HOH
HOH
824
B
WAT
92
9
HOH
HOH
825
B
WAT
94
9
HOH
HOH
826
B
WAT
96
9
HOH
HOH
827
B
WAT
98
9
HOH
HOH
828
B
WAT
107
9
HOH
HOH
829
B
WAT
108
9
HOH
HOH
830
B
WAT
114
9
HOH
HOH
831
B
WAT
115
9
HOH
HOH
832
B
WAT
116
9
HOH
HOH
833
B
WAT
118
9
HOH
HOH
834
B
WAT
122
9
HOH
HOH
835
B
WAT
125
9
HOH
HOH
836
B
WAT
127
9
HOH
HOH
837
B
WAT
134
9
HOH
HOH
838
B
WAT
135
9
HOH
HOH
839
B
WAT
136
9
HOH
HOH
840
B
WAT
139
9
HOH
HOH
841
B
WAT
141
9
HOH
HOH
842
B
WAT
144
9
HOH
HOH
843
B
WAT
145
9
HOH
HOH
844
B
WAT
149
9
HOH
HOH
845
B
WAT
158
9
HOH
HOH
846
B
WAT
162
9
HOH
HOH
847
B
WAT
163
9
HOH
HOH
848
B
WAT
179
9
HOH
HOH
849
B
WAT
180
9
HOH
HOH
850
B
WAT
181
9
HOH
HOH
851
B
WAT
182
9
HOH
HOH
852
B
WAT
183
9
HOH
HOH
853
B
WAT
186
9
HOH
HOH
854
B
WAT
194
9
HOH
HOH
855
B
WAT
195
9
HOH
HOH
856
B
WAT
201
9
HOH
HOH
857
B
WAT
206
9
HOH
HOH
858
B
WAT
210
9
HOH
HOH
859
B
WAT
215
9
HOH
HOH
860
B
WAT
217
9
HOH
HOH
861
B
WAT
221
9
HOH
HOH
862
B
WAT
227
9
HOH
HOH
863
B
WAT
231
9
HOH
HOH
864
B
WAT
232
9
HOH
HOH
865
B
WAT
233
9
HOH
HOH
866
B
WAT
234
9
HOH
HOH
867
B
WAT
245
9
HOH
HOH
868
B
WAT
247
9
HOH
HOH
869
B
WAT
248
9
HOH
HOH
870
B
WAT
253
9
HOH
HOH
871
B
WAT
254
9
HOH
HOH
872
B
WAT
258
9
HOH
HOH
873
B
WAT
261
9
HOH
HOH
874
B
WAT
265
9
HOH
HOH
875
B
WAT
266
9
HOH
HOH
876
B
WAT
271
9
HOH
HOH
877
B
WAT
276
9
HOH
HOH
878
B
WAT
283
9
HOH
HOH
879
B
WAT
284
9
HOH
HOH
880
B
WAT
285
9
HOH
HOH
881
B
WAT
292
9
HOH
HOH
882
B
WAT
298
9
HOH
HOH
883
B
WAT
300
9
HOH
HOH
884
B
WAT
301
9
HOH
HOH
885
B
WAT
311
9
HOH
HOH
886
B
WAT
317
9
HOH
HOH
887
B
WAT
319
9
HOH
HOH
888
B
WAT
320
9
HOH
HOH
889
B
WAT
322
9
HOH
HOH
890
B
WAT
328
9
HOH
HOH
891
B
WAT
331
9
HOH
HOH
892
B
WAT
334
9
HOH
HOH
893
B
WAT
336
9
HOH
HOH
894
B
WAT
338
9
HOH
HOH
895
B
WAT
340
9
HOH
HOH
896
B
WAT
341
9
HOH
HOH
897
B
WAT
344
9
HOH
HOH
898
B
WAT
13
9
HOH
HOH
13
P
WAT
17
9
HOH
HOH
17
P
WAT
45
9
HOH
HOH
45
P
WAT
56
9
HOH
HOH
56
P
WAT
57
9
HOH
HOH
57
P
WAT
208
9
HOH
HOH
208
P
WAT
243
9
HOH
HOH
243
P
WAT
296
9
HOH
HOH
296
P
GLY
1
n
1
GLY
1
A
PRO
2
n
2
PRO
2
A
HIS
3
n
3
HIS
3
A
SER
4
n
4
SER
4
A
LEU
5
n
5
LEU
5
A
ARG
6
n
6
ARG
6
A
TYR
7
n
7
TYR
7
A
PHE
8
n
8
PHE
8
A
VAL
9
n
9
VAL
9
A
THR
10
n
10
THR
10
A
ALA
11
n
11
ALA
11
A
VAL
12
n
12
VAL
12
A
SER
13
n
13
SER
13
A
ARG
14
n
14
ARG
14
A
PRO
15
n
15
PRO
15
A
GLY
16
n
16
GLY
16
A
LEU
17
n
17
LEU
17
A
GLY
18
n
18
GLY
18
A
GLU
19
n
19
GLU
19
A
PRO
20
n
20
PRO
20
A
ARG
21
n
21
ARG
21
A
PHE
22
n
22
PHE
22
A
ILE
23
n
23
ILE
23
A
SER
24
n
24
SER
24
A
VAL
25
n
25
VAL
25
A
GLY
26
n
26
GLY
26
A
TYR
27
n
27
TYR
27
A
VAL
28
n
28
VAL
28
A
ASP
29
n
29
ASP
29
A
ASN
30
n
30
ASN
30
A
THR
31
n
31
THR
31
A
GLU
32
n
32
GLU
32
A
PHE
33
n
33
PHE
33
A
VAL
34
n
34
VAL
34
A
ARG
35
n
35
ARG
35
A
PHE
36
n
36
PHE
36
A
ASP
37
n
37
ASP
37
A
SER
38
n
38
SER
38
A
ASP
39
n
39
ASP
39
A
ALA
40
n
40
ALA
40
A
GLU
41
n
41
GLU
41
A
ASN
42
n
42
ASN
42
A
PRO
43
n
43
PRO
43
A
ARG
44
n
44
ARG
44
A
TYR
45
n
45
TYR
45
A
GLU
46
n
46
GLU
46
A
PRO
47
n
47
PRO
47
A
ARG
48
n
48
ARG
48
A
ALA
49
n
49
ALA
49
A
ARG
50
n
50
ARG
50
A
TRP
51
n
51
TRP
51
A
MET
52
n
52
MET
52
A
GLU
53
n
53
GLU
53
A
GLN
54
n
54
GLN
54
A
GLU
55
n
55
GLU
55
A
GLY
56
n
56
GLY
56
A
PRO
57
n
57
PRO
57
A
GLU
58
n
58
GLU
58
A
TYR
59
n
59
TYR
59
A
TRP
60
n
60
TRP
60
A
GLU
61
n
61
GLU
61
A
ARG
62
n
62
ARG
62
A
GLU
63
n
63
GLU
63
A
THR
64
n
64
THR
64
A
GLN
65
n
65
GLN
65
A
LYS
66
n
66
LYS
66
A
ALA
67
n
67
ALA
67
A
LYS
68
n
68
LYS
68
A
GLY
69
n
69
GLY
69
A
ASN
70
n
70
ASN
70
A
GLU
71
n
71
GLU
71
A
GLN
72
n
72
GLN
72
A
SER
73
n
73
SER
73
A
PHE
74
n
74
PHE
74
A
ARG
75
n
75
ARG
75
A
VAL
76
n
76
VAL
76
A
ASP
77
n
77
ASP
77
A
LEU
78
n
78
LEU
78
A
ARG
79
n
79
ARG
79
A
THR
80
n
80
THR
80
A
LEU
81
n
81
LEU
81
A
LEU
82
n
82
LEU
82
A
GLY
83
n
83
GLY
83
A
TYR
84
n
84
TYR
84
A
TYR
85
n
85
TYR
85
A
ASN
86
n
86
ASN
86
A
GLN
87
n
87
GLN
87
A
SER
88
n
88
SER
88
A
LYS
89
n
89
LYS
89
A
GLY
90
n
90
GLY
90
A
GLY
91
n
91
GLY
91
A
SER
92
n
92
SER
92
A
HIS
93
n
93
HIS
93
A
THR
94
n
94
THR
94
A
ILE
95
n
95
ILE
95
A
GLN
96
n
96
GLN
96
A
VAL
97
n
97
VAL
97
A
ILE
98
n
98
ILE
98
A
SER
99
n
99
SER
99
A
GLY
100
n
100
GLY
100
A
CYS
101
n
101
CYS
101
A
GLU
102
n
102
GLU
102
A
VAL
103
n
103
VAL
103
A
GLY
104
n
104
GLY
104
A
SER
105
n
105
SER
105
A
ASP
106
n
106
ASP
106
A
GLY
107
n
107
GLY
107
A
ARG
108
n
108
ARG
108
A
LEU
109
n
109
LEU
109
A
LEU
110
n
110
LEU
110
A
ARG
111
n
111
ARG
111
A
GLY
112
n
112
GLY
112
A
TYR
113
n
113
TYR
113
A
GLN
114
n
114
GLN
114
A
GLN
115
n
115
GLN
115
A
TYR
116
n
116
TYR
116
A
ALA
117
n
117
ALA
117
A
TYR
118
n
118
TYR
118
A
ASP
119
n
119
ASP
119
A
GLY
120
n
120
GLY
120
A
CEA
121
n
121
CSO
121
A
ASP
122
n
122
ASP
122
A
TYR
123
n
123
TYR
123
A
ILE
124
n
124
ILE
124
A
ALA
125
n
125
ALA
125
A
LEU
126
n
126
LEU
126
A
ASN
127
n
127
ASN
127
A
GLU
128
n
128
GLU
128
A
ASP
129
n
129
ASP
129
A
LEU
130
n
130
LEU
130
A
LYS
131
n
131
LYS
131
A
THR
132
n
132
THR
132
A
TRP
133
n
133
TRP
133
A
THR
134
n
134
THR
134
A
ALA
135
n
135
ALA
135
A
ALA
136
n
136
ALA
136
A
ASP
137
n
137
ASP
137
A
MET
138
n
138
MET
138
A
ALA
139
n
139
ALA
139
A
ALA
140
n
140
ALA
140
A
LEU
141
n
141
LEU
141
A
ILE
142
n
142
ILE
142
A
THR
143
n
143
THR
143
A
LYS
144
n
144
LYS
144
A
HIS
145
n
145
HIS
145
A
LYS
146
n
146
LYS
146
A
TRP
147
n
147
TRP
147
A
GLU
148
n
148
GLU
148
A
GLN
149
n
149
GLN
149
A
ALA
150
n
150
ALA
150
A
GLY
151
n
151
GLY
151
A
GLU
152
n
152
GLU
152
A
ALA
153
n
153
ALA
153
A
GLU
154
n
154
GLU
154
A
ARG
155
n
155
ARG
155
A
LEU
156
n
156
LEU
156
A
ARG
157
n
157
ARG
157
A
ALA
158
n
158
ALA
158
A
TYR
159
n
159
TYR
159
A
LEU
160
n
160
LEU
160
A
GLU
161
n
161
GLU
161
A
GLY
162
n
162
GLY
162
A
THR
163
n
163
THR
163
A
CYS
164
n
164
CYS
164
A
VAL
165
n
165
VAL
165
A
GLU
166
n
166
GLU
166
A
TRP
167
n
167
TRP
167
A
LEU
168
n
168
LEU
168
A
ARG
169
n
169
ARG
169
A
ARG
170
n
170
ARG
170
A
TYR
171
n
171
TYR
171
A
LEU
172
n
172
LEU
172
A
LYS
173
n
173
LYS
173
A
ASN
174
n
174
ASN
174
A
GLY
175
n
175
GLY
175
A
ASN
176
n
176
ASN
176
A
ALA
177
n
177
ALA
177
A
THR
178
n
178
THR
178
A
LEU
179
n
179
LEU
179
A
LEU
180
n
180
LEU
180
A
ARG
181
n
181
ARG
181
A
THR
182
n
182
THR
182
A
ASP
183
n
183
ASP
183
A
SER
184
n
184
SER
184
A
PRO
185
n
185
PRO
185
A
LYS
186
n
186
LYS
186
A
ALA
187
n
187
ALA
187
A
HIS
188
n
188
HIS
188
A
VAL
189
n
189
VAL
189
A
THR
190
n
190
THR
190
A
HIS
191
n
191
HIS
191
A
HIS
192
n
192
HIS
192
A
SER
193
n
193
SER
193
A
ARG
194
n
194
ARG
194
A
PRO
195
n
195
PRO
195
A
GLU
196
n
196
GLU
196
A
ASP
197
n
197
ASP
197
A
LYS
198
n
198
LYS
198
A
VAL
199
n
199
VAL
199
A
THR
200
n
200
THR
200
A
LEU
201
n
201
LEU
201
A
ARG
202
n
202
ARG
202
A
CYS
203
n
203
CYS
203
A
TRP
204
n
204
TRP
204
A
ALA
205
n
205
ALA
205
A
LEU
206
n
206
LEU
206
A
GLY
207
n
207
GLY
207
A
PHE
208
n
208
PHE
208
A
TYR
209
n
209
TYR
209
A
PRO
210
n
210
PRO
210
A
ALA
211
n
211
ALA
211
A
ASP
212
n
212
ASP
212
A
ILE
213
n
213
ILE
213
A
THR
214
n
214
THR
214
A
LEU
215
n
215
LEU
215
A
THR
216
n
216
THR
216
A
TRP
217
n
217
TRP
217
A
GLN
218
n
218
GLN
218
A
LEU
219
n
219
LEU
219
A
ASN
220
n
220
ASN
220
A
GLY
221
n
221
GLY
221
A
GLU
222
n
222
GLU
222
A
GLU
223
n
223
GLU
223
A
LEU
224
n
224
LEU
224
A
ILE
225
n
225
ILE
225
A
GLN
226
n
226
GLN
226
A
ASP
227
n
227
ASP
227
A
MET
228
n
228
MET
228
A
GLU
229
n
229
GLU
229
A
LEU
230
n
230
LEU
230
A
VAL
231
n
231
VAL
231
A
GLU
232
n
232
GLU
232
A
THR
233
n
233
THR
233
A
ARG
234
n
234
ARG
234
A
PRO
235
n
235
PRO
235
A
ALA
236
n
236
ALA
236
A
GLY
237
n
237
GLY
237
A
ASP
238
n
238
ASP
238
A
GLY
239
n
239
GLY
239
A
THR
240
n
240
THR
240
A
PHE
241
n
241
PHE
241
A
GLN
242
n
242
GLN
242
A
LYS
243
n
243
LYS
243
A
TRP
244
n
244
TRP
244
A
ALA
245
n
245
ALA
245
A
SER
246
n
246
SER
246
A
VAL
247
n
247
VAL
247
A
VAL
248
n
248
VAL
248
A
VAL
249
n
249
VAL
249
A
PRO
250
n
250
PRO
250
A
LEU
251
n
251
LEU
251
A
GLY
252
n
252
GLY
252
A
LYS
253
n
253
LYS
253
A
GLU
254
n
254
GLU
254
A
GLN
255
n
255
GLN
255
A
TYR
256
n
256
TYR
256
A
TYR
257
n
257
TYR
257
A
THR
258
n
258
THR
258
A
CYS
259
n
259
CYS
259
A
HIS
260
n
260
HIS
260
A
VAL
261
n
261
VAL
261
A
TYR
262
n
262
TYR
262
A
HIS
263
n
263
HIS
263
A
GLN
264
n
264
GLN
264
A
GLY
265
n
265
GLY
265
A
LEU
266
n
266
LEU
266
A
PRO
267
n
267
PRO
267
A
GLU
268
n
268
GLU
268
A
PRO
269
n
269
PRO
269
A
LEU
270
n
270
LEU
270
A
THR
271
n
271
THR
271
A
LEU
272
n
272
LEU
272
A
ARG
273
n
273
ARG
273
A
TRP
274
n
274
TRP
274
A
ILE
1
n
1
ILE
1
B
GLN
2
n
2
GLN
2
B
LYS
3
n
3
LYS
3
B
THR
4
n
4
THR
4
B
PRO
5
n
5
PRO
5
B
GLN
6
n
6
GLN
6
B
ILE
7
n
7
ILE
7
B
GLN
8
n
8
GLN
8
B
VAL
9
n
9
VAL
9
B
TYR
10
n
10
TYR
10
B
SER
11
n
11
SER
11
B
ARG
12
n
12
ARG
12
B
HIS
13
n
13
HIS
13
B
PRO
14
n
14
PRO
14
B
PRO
15
n
15
PRO
15
B
GLU
16
n
16
GLU
16
B
ASN
17
n
17
ASN
17
B
GLY
18
n
18
GLY
18
B
LYS
19
n
19
LYS
19
B
PRO
20
n
20
PRO
20
B
ASN
21
n
21
ASN
21
B
ILE
22
n
22
ILE
22
B
LEU
23
n
23
LEU
23
B
ASN
24
n
24
ASN
24
B
CYS
25
n
25
CYS
25
B
TYR
26
n
26
TYR
26
B
VAL
27
n
27
VAL
27
B
THR
28
n
28
THR
28
B
GLN
29
n
29
GLN
29
B
PHE
30
n
30
PHE
30
B
HIS
31
n
31
HIS
31
B
PRO
32
n
32
PRO
32
B
PRO
33
n
33
PRO
33
B
HIS
34
n
34
HIS
34
B
ILE
35
n
35
ILE
35
B
GLU
36
n
36
GLU
36
B
ILE
37
n
37
ILE
37
B
GLN
38
n
38
GLN
38
B
MET
39
n
39
MET
39
B
LEU
40
n
40
LEU
40
B
LYS
41
n
41
LYS
41
B
ASN
42
n
42
ASN
42
B
GLY
43
n
43
GLY
43
B
LYS
44
n
44
LYS
44
B
LYS
45
n
45
LYS
45
B
ILE
46
n
46
ILE
46
B
PRO
47
n
47
PRO
47
B
LYS
48
n
48
LYS
48
B
VAL
49
n
49
VAL
49
B
GLU
50
n
50
GLU
50
B
MET
51
n
51
MET
51
B
SER
52
n
52
SER
52
B
ASP
53
n
53
ASP
53
B
MET
54
n
54
MET
54
B
SER
55
n
55
SER
55
B
PHE
56
n
56
PHE
56
B
SER
57
n
57
SER
57
B
LYS
58
n
58
LYS
58
B
ASP
59
n
59
ASP
59
B
TRP
60
n
60
TRP
60
B
SER
61
n
61
SER
61
B
PHE
62
n
62
PHE
62
B
TYR
63
n
63
TYR
63
B
ILE
64
n
64
ILE
64
B
LEU
65
n
65
LEU
65
B
ALA
66
n
66
ALA
66
B
HIS
67
n
67
HIS
67
B
THR
68
n
68
THR
68
B
GLU
69
n
69
GLU
69
B
PHE
70
n
70
PHE
70
B
THR
71
n
71
THR
71
B
PRO
72
n
72
PRO
72
B
THR
73
n
73
THR
73
B
GLU
74
n
74
GLU
74
B
THR
75
n
75
THR
75
B
ASP
76
n
76
ASP
76
B
THR
77
n
77
THR
77
B
TYR
78
n
78
TYR
78
B
ALA
79
n
79
ALA
79
B
CYS
80
n
80
CYS
80
B
ARG
81
n
81
ARG
81
B
VAL
82
n
82
VAL
82
B
LYS
83
n
83
LYS
83
B
HIS
84
n
84
HIS
84
B
ASP
85
n
85
ASP
85
B
SER
86
n
86
SER
86
B
MET
87
n
87
MET
87
B
ALA
88
n
88
ALA
88
B
GLU
89
n
89
GLU
89
B
PRO
90
n
90
PRO
90
B
LYS
91
n
91
LYS
91
B
THR
92
n
92
THR
92
B
VAL
93
n
93
VAL
93
B
TYR
94
n
94
TYR
94
B
TRP
95
n
95
TRP
95
B
ASP
96
n
96
ASP
96
B
ARG
97
n
97
ARG
97
B
ASP
98
n
98
ASP
98
B
MET
99
n
99
MET
99
B
PHE
1
n
1
PHE
1
P
ALA
2
n
2
ALA
2
P
PRO
3
n
3
PRO
3
P
GLY
4
n
4
GLY
4
P
ASN
5
n
5
ASN
5
P
TYR
6
n
6
TYR
6
P
PRO
7
n
7
PRO
7
P
ALA
8
n
8
ALA
8
P
LEU
9
n
9
LEU
9
P
author_and_software_defined_assembly
PISA
3
trimeric
6230
-44
19020
A
ASN
86
GLYCOSYLATION SITE
A
ASN
86
ASN
A
ASN
176
GLYCOSYLATION SITE
A
ASN
176
ASN
A
CSO
121
S-HYDROXYCYSTEINE
A
CSO
121
CYS
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLU
46
A
N
GLU
46
A
O
ARG
35
A
O
ARG
35
A
O
PHE
36
A
O
PHE
36
A
N
SER
24
A
N
SER
24
A
N
TYR
27
A
N
TYR
27
A
O
ARG
6
A
O
ARG
6
A
O
ALA
11
A
O
ALA
11
A
N
ILE
95
A
N
ILE
95
A
O
GLU
102
A
O
GLU
102
A
N
LEU
110
A
N
LEU
110
A
N
TYR
116
A
N
TYR
116
A
O
ILE
124
A
O
ILE
124
A
O
ALA
125
A
O
ALA
125
A
N
THR
134
A
N
THR
134
A
O
HIS
192
A
O
HIS
192
A
N
THR
200
A
N
THR
200
A
O
PHE
208
A
O
PHE
208
A
N
PHE
241
A
N
PHE
241
A
N
SER
246
A
N
SER
246
A
O
GLU
229
A
O
GLU
229
A
O
HIS
192
A
O
HIS
192
A
N
THR
200
A
N
THR
200
A
O
PHE
208
A
O
PHE
208
A
N
PHE
241
A
N
PHE
241
A
O
GLN
242
A
O
GLN
242
A
N
ARG
234
A
N
ARG
234
A
O
GLU
222
A
O
GLU
222
A
N
LEU
219
A
N
LEU
219
A
N
GLN
218
A
N
GLN
218
A
O
THR
258
A
O
THR
258
A
O
VAL
261
A
O
VAL
261
A
N
LEU
270
A
N
LEU
270
B
O
TYR
10
B
O
TYR
10
B
N
ASN
24
B
N
ASN
24
B
O
PHE
30
B
O
PHE
30
B
N
PHE
62
B
N
PHE
62
B
O
HIS
67
B
O
HIS
67
B
N
GLU
50
B
N
GLU
50
B
O
LYS
44
B
O
LYS
44
B
N
LYS
41
B
N
LYS
41
B
N
LEU
40
B
N
LEU
40
B
O
ALA
79
B
O
ALA
79
B
N
VAL
82
B
N
VAL
82
B
O
LYS
91
B
O
LYS
91
1
A
ASP
29
57.06
-127.69
1
A
GLU
196
71.25
33.59
1
A
PRO
210
-69.31
-177.90
1
A
GLN
226
-71.28
-72.85
1
A
ASP
227
-69.04
2.31
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
WATER.TOP
CARBOHYDRATE.PARAM
CARBOHYDRATE.TOP
ION.PARAM
LIGAND.TOP
LIGAND.PAR
ION.TOP
26.2
-1.53
0.00
0.00
1.98
0.00
-0.44
0.211
0.004
0.197
0.197
1.80
19.90
3473
45593
7.6
89.5
RANDOM
100134178.82
0.00
1
RESTRAINED
THROUGHOUT
0.0
0.0
CNS, done by rigid body refinement
of starting model.
pdb-entry 2vaa without peptide, water, and mutated side
chains truncated to alanine.
Engh & Huber
FLAT MODEL
48.96
0.400
0.22
0.20
5.00
0.17
0.15
1.80
19.90
352
3537
67
0
3118
0.008
1.5
25.5
1.20
0.95
1.50
1.57
2.00
1.56
2.00
2.48
2.50
0.258
0.011
0.245
1.91
558
6525
6
7.9
85.0
16.0
1.8
19.9
1FZO
47714
47714
2.4
0.074
1
21.9
4.2
93.8
0.494
1.80
1.82
2.4
1601
1
4.1
95.4
data reduction
DENZO
data scaling
SCALEPACK
refinement
CNS
phasing
CNS
MHC CLASS I NATURAL MUTANT H-2KBM8 HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND SENDAI VIRUS NUCLEOPROTEIN
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
7
N
N
8
N
N
7
N
N
9
N
N
9
N
N
9
N
N
A
ALA
49
A
ALA
49
HELX_P
A
GLU
55
A
GLU
55
5
1
7
A
GLY
56
A
GLY
56
HELX_P
A
TYR
85
A
TYR
85
1
2
30
A
ASP
137
A
ASP
137
HELX_P
A
ALA
150
A
ALA
150
1
3
14
A
GLY
151
A
GLY
151
HELX_P
A
GLY
162
A
GLY
162
1
4
12
A
GLY
162
A
GLY
162
HELX_P
A
GLY
175
A
GLY
175
1
5
14
A
GLY
175
A
GLY
175
HELX_P
A
LEU
180
A
LEU
180
1
6
6
A
LYS
253
A
LYS
253
HELX_P
A
GLN
255
A
GLN
255
5
7
3
disulf
2.044
A
CYS
101
A
SG
CYS
101
1_555
A
CYS
164
A
SG
CYS
164
1_555
disulf
2.013
A
CYS
203
A
SG
CYS
203
1_555
A
CYS
259
A
SG
CYS
259
1_555
disulf
2.025
B
CYS
25
B
SG
CYS
25
1_555
B
CYS
80
B
SG
CYS
80
1_555
covale
1.453
one
N-Glycosylation
A
ASN
86
A
ND2
ASN
86
1_555
A
NAG
500
E
C1
NAG
1_555
covale
1.327
both
A
GLY
120
A
C
GLY
120
1_555
A
CSO
121
A
N
CSO
121
1_555
covale
1.332
both
A
CSO
121
A
C
CSO
121
1_555
A
ASP
122
A
N
ASP
122
1_555
covale
1.454
one
N-Glycosylation
A
ASN
176
A
ND2
ASN
176
1_555
C
NAG
1
D
C1
NAG
1_555
covale
1.389
both
C
NAG
1
D
O6
NAG
1_555
C
FUL
2
D
C1
FUL
1_555
IMMUNE SYSTEM
major histocompatibility complex peptide-MHC, IMMUNE SYSTEM
A
TYR
209
A
TYR
209
1
A
PRO
210
A
PRO
210
-0.19
B
HIS
31
B
HIS
31
1
B
PRO
32
B
PRO
32
0.05
HA1B_MOUSE
UNP
1
22
P01901
GPHSLRYFVTAVSRPGLGEPRYMEVGYVDDTEFVRFDSDAENPRYEPRARWMEQEGPEYWERETQKAKGNEQSFRVDLRT
LLGYYNQSKGGSHTIQVISGCEVGSDGRLLRGYQQYAYDGCDYIALNEDLKTWTAADMAALITKHKWEQAGEAERLRAYL
EGTCVEWLRRYLKNGNATLLRTDSPKAHVTHHSRPEDKVTLRCWALGFYPADITLTWQLNGEELIQDMELVETRPAGDGT
FQKWASVVVPLGKEQYYTCHVYHQGLPEPLTLRW
B2MG_MOUSE
UNP
2
21
P01887
IQKTPQIQVYSRHPPENGKPNILNCYVTQFHPPHIEIQMLKNGKKIPKVEMSDMSFSKDWSFYILAHTEFTPTETDTYAC
RVKHDSMAEPKTVYWDRDM
NCAP_SENDE
UNP
3
324
P04857
FAPGNYPAL
22
295
1FZO
1
274
P01901
A
1
1
274
21
119
1FZO
1
99
P01887
B
2
1
99
324
332
1FZO
1
9
P04857
P
3
1
9
1
TYR
engineered mutation
PHE
22
1FZO
A
P01901
UNP
43
22
1
MET
engineered mutation
ILE
23
1FZO
A
P01901
UNP
44
23
1
GLU
engineered mutation
SER
24
1FZO
A
P01901
UNP
45
24
1
ASP
engineered mutation
ASN
30
1FZO
A
P01901
UNP
51
30
1
CYS
modified residue
CSO
121
1FZO
A
P01901
UNP
142
121
8
4
4
4
4
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
46
A
GLU
46
A
PRO
47
A
PRO
47
A
THR
31
A
THR
31
A
ASP
37
A
ASP
37
A
ARG
21
A
ARG
21
A
VAL
28
A
VAL
28
A
HIS
3
A
HIS
3
A
VAL
12
A
VAL
12
A
THR
94
A
THR
94
A
VAL
103
A
VAL
103
A
LEU
109
A
LEU
109
A
TYR
118
A
TYR
118
A
ILE
124
A
ILE
124
A
LEU
126
A
LEU
126
A
TRP
133
A
TRP
133
A
ALA
135
A
ALA
135
A
LYS
186
A
LYS
186
A
SER
193
A
SER
193
A
LYS
198
A
LYS
198
A
PHE
208
A
PHE
208
A
PHE
241
A
PHE
241
A
PRO
250
A
PRO
250
A
GLU
229
A
GLU
229
A
LEU
230
A
LEU
230
A
LYS
186
A
LYS
186
A
SER
193
A
SER
193
A
LYS
198
A
LYS
198
A
PHE
208
A
PHE
208
A
PHE
241
A
PHE
241
A
PRO
250
A
PRO
250
A
ARG
234
A
ARG
234
A
PRO
235
A
PRO
235
A
GLU
222
A
GLU
222
A
GLU
223
A
GLU
223
A
THR
214
A
THR
214
A
LEU
219
A
LEU
219
A
TYR
257
A
TYR
257
A
TYR
262
A
TYR
262
A
LEU
270
A
LEU
270
A
LEU
272
A
LEU
272
B
GLN
6
B
GLN
6
B
SER
11
B
SER
11
B
ASN
21
B
ASN
21
B
PHE
30
B
PHE
30
B
PHE
62
B
PHE
62
B
PHE
70
B
PHE
70
B
GLU
50
B
GLU
50
B
PHE
56
B
PHE
56
B
LYS
44
B
LYS
44
B
LYS
45
B
LYS
45
B
GLU
36
B
GLU
36
B
LYS
41
B
LYS
41
B
TYR
78
B
TYR
78
B
LYS
83
B
LYS
83
B
LYS
91
B
LYS
91
B
TYR
94
B
TYR
94
18
P 21 21 2