0.022919
0.000000
0.002199
0.000000
0.023948
0.000000
0.000000
0.000000
0.013057
0.00000
0.00000
0.00000
Hori, T.
Kumasaka, T.
Yamamoto, M.
Nonaka, T.
Tanaka, N.
Hashimoto, Y.
Ueki, T.
Takio, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
95.48
90.00
43.631
41.757
76.941
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C6 H12 O6
180.156
alpha-D-mannopyranose
D-saccharide, alpha linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
57
361
368
10.1107/S0907444900019740
11223512
Structure of a new 'aspzincin' metalloendopeptidase from Grifola frondosa: implications for the catalytic mechanism and substrate specificity based on several different crystal forms.
2001
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
IMAGE PLATE
1998-02-11
RIGAKU RAXIS IV
SINGLE WAVELENGTH
M
x-ray
1
1.04
1.0
BL45XU
SPring-8
1.04
SYNCHROTRON
SPRING-8 BEAMLINE BL45XU
18058.424
PEPTIDYL-LYS METALLOENDOPEPTIDASE
3.4.24.20
1
nat
polymer
180.156
alpha-D-mannopyranose
1
man
non-polymer
65.409
ZINC ION
1
syn
non-polymer
18.015
water
201
nat
water
no
no
TYNGCSSSEQSALAAAASAAQSYVAESLSYLQTHTAATPRYTTWFGSYISSRHSTVLQHYTDMNSNDFSSYSFDCTCTAA
GTFAYVYPNRFGTVYLCGAFWKAPTTGTDSQAGTLVHESSHFTRNGGTKDYAYGQAAAKSLATMDPDKAVMNADNHEYFS
ENNPAQS
TYNGCSSSEQSALAAAASAAQSYVAESLSYLQTHTAATPRYTTWFGSYISSRHSTVLQHYTDMNSNDFSSYSFDCTCTAA
GTFAYVYPNRFGTVYLCGAFWKAPTTGTDSQAGTLVHESSHFTRNGGTKDYAYGQAAAKSLATMDPDKAVMNADNHEYFS
ENNPAQS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Grifola
sample
5627
Grifola frondosa
FRUITING BODY
1
1.93
36.31
VAPOR DIFFUSION, HANGING DROP
7
sodium chloride, pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 297K
297
software
chem_comp
entity
pdbx_chem_comp_identifier
pdbx_entity_nonpoly
pdbx_struct_conn_angle
struct_conn
struct_site
struct_site_gen
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Version format compliance
Refinement description
Data collection
Derived calculations
Structure summary
1
0
2001-03-14
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-10-04
1
4
2020-07-29
_chem_comp.name
_chem_comp.type
_entity.pdbx_description
_pdbx_entity_nonpoly.name
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
DManpa
a-D-mannopyranose
a-D-Manp
Man
1GE5 contains the same enzyme with different crystal form.
1GE6 contains the same enzyme with different crystal form.
1GE7 contains the same enzyme with different crystal form.
RCSB
Y
PDBJ
2000-10-10
REL
REL
MAN
alpha-D-mannopyranose
ZN
ZINC ION
HOH
water
MAN
900
2
MAN
MAN
900
A
ZN
200
3
ZN
ZN
200
A
WAT
201
4
HOH
HOH
201
A
WAT
202
4
HOH
HOH
202
A
WAT
204
4
HOH
HOH
204
A
WAT
205
4
HOH
HOH
205
A
WAT
206
4
HOH
HOH
206
A
WAT
207
4
HOH
HOH
207
A
WAT
208
4
HOH
HOH
208
A
WAT
209
4
HOH
HOH
209
A
WAT
210
4
HOH
HOH
210
A
WAT
211
4
HOH
HOH
211
A
WAT
212
4
HOH
HOH
212
A
WAT
213
4
HOH
HOH
213
A
WAT
214
4
HOH
HOH
214
A
WAT
215
4
HOH
HOH
215
A
WAT
216
4
HOH
HOH
216
A
WAT
217
4
HOH
HOH
217
A
WAT
219
4
HOH
HOH
219
A
WAT
220
4
HOH
HOH
220
A
WAT
221
4
HOH
HOH
221
A
WAT
222
4
HOH
HOH
222
A
WAT
223
4
HOH
HOH
223
A
WAT
224
4
HOH
HOH
224
A
WAT
225
4
HOH
HOH
225
A
WAT
226
4
HOH
HOH
226
A
WAT
227
4
HOH
HOH
227
A
WAT
228
4
HOH
HOH
228
A
WAT
229
4
HOH
HOH
229
A
WAT
230
4
HOH
HOH
230
A
WAT
231
4
HOH
HOH
231
A
WAT
232
4
HOH
HOH
232
A
WAT
233
4
HOH
HOH
233
A
WAT
234
4
HOH
HOH
234
A
WAT
235
4
HOH
HOH
235
A
WAT
236
4
HOH
HOH
236
A
WAT
238
4
HOH
HOH
238
A
WAT
240
4
HOH
HOH
240
A
WAT
241
4
HOH
HOH
241
A
WAT
242
4
HOH
HOH
242
A
WAT
243
4
HOH
HOH
243
A
WAT
244
4
HOH
HOH
244
A
WAT
246
4
HOH
HOH
246
A
WAT
247
4
HOH
HOH
247
A
WAT
248
4
HOH
HOH
248
A
WAT
249
4
HOH
HOH
249
A
WAT
250
4
HOH
HOH
250
A
WAT
251
4
HOH
HOH
251
A
WAT
252
4
HOH
HOH
252
A
WAT
253
4
HOH
HOH
253
A
WAT
255
4
HOH
HOH
255
A
WAT
256
4
HOH
HOH
256
A
WAT
257
4
HOH
HOH
257
A
WAT
259
4
HOH
HOH
259
A
WAT
260
4
HOH
HOH
260
A
WAT
263
4
HOH
HOH
263
A
WAT
267
4
HOH
HOH
267
A
WAT
269
4
HOH
HOH
269
A
WAT
271
4
HOH
HOH
271
A
WAT
272
4
HOH
HOH
272
A
WAT
273
4
HOH
HOH
273
A
WAT
275
4
HOH
HOH
275
A
WAT
276
4
HOH
HOH
276
A
WAT
277
4
HOH
HOH
277
A
WAT
279
4
HOH
HOH
279
A
WAT
281
4
HOH
HOH
281
A
WAT
282
4
HOH
HOH
282
A
WAT
284
4
HOH
HOH
284
A
WAT
289
4
HOH
HOH
289
A
WAT
290
4
HOH
HOH
290
A
WAT
291
4
HOH
HOH
291
A
WAT
293
4
HOH
HOH
293
A
WAT
299
4
HOH
HOH
299
A
WAT
301
4
HOH
HOH
301
A
WAT
305
4
HOH
HOH
305
A
WAT
311
4
HOH
HOH
311
A
WAT
316
4
HOH
HOH
316
A
WAT
327
4
HOH
HOH
327
A
WAT
330
4
HOH
HOH
330
A
WAT
332
4
HOH
HOH
332
A
WAT
335
4
HOH
HOH
335
A
WAT
344
4
HOH
HOH
344
A
WAT
349
4
HOH
HOH
349
A
WAT
352
4
HOH
HOH
352
A
WAT
353
4
HOH
HOH
353
A
WAT
354
4
HOH
HOH
354
A
WAT
356
4
HOH
HOH
356
A
WAT
357
4
HOH
HOH
357
A
WAT
366
4
HOH
HOH
366
A
WAT
401
4
HOH
HOH
401
A
WAT
405
4
HOH
HOH
405
A
WAT
407
4
HOH
HOH
407
A
WAT
413
4
HOH
HOH
413
A
WAT
415
4
HOH
HOH
415
A
WAT
416
4
HOH
HOH
416
A
WAT
419
4
HOH
HOH
419
A
WAT
422
4
HOH
HOH
422
A
WAT
423
4
HOH
HOH
423
A
WAT
424
4
HOH
HOH
424
A
WAT
425
4
HOH
HOH
425
A
WAT
427
4
HOH
HOH
427
A
WAT
428
4
HOH
HOH
428
A
WAT
429
4
HOH
HOH
429
A
WAT
430
4
HOH
HOH
430
A
WAT
432
4
HOH
HOH
432
A
WAT
441
4
HOH
HOH
441
A
WAT
505
4
HOH
HOH
505
A
WAT
508
4
HOH
HOH
508
A
WAT
510
4
HOH
HOH
510
A
WAT
512
4
HOH
HOH
512
A
WAT
514
4
HOH
HOH
514
A
WAT
515
4
HOH
HOH
515
A
WAT
516
4
HOH
HOH
516
A
WAT
521
4
HOH
HOH
521
A
WAT
522
4
HOH
HOH
522
A
WAT
525
4
HOH
HOH
525
A
WAT
526
4
HOH
HOH
526
A
WAT
531
4
HOH
HOH
531
A
WAT
534
4
HOH
HOH
534
A
WAT
538
4
HOH
HOH
538
A
WAT
539
4
HOH
HOH
539
A
WAT
540
4
HOH
HOH
540
A
WAT
541
4
HOH
HOH
541
A
WAT
543
4
HOH
HOH
543
A
WAT
545
4
HOH
HOH
545
A
WAT
547
4
HOH
HOH
547
A
WAT
549
4
HOH
HOH
549
A
WAT
558
4
HOH
HOH
558
A
WAT
559
4
HOH
HOH
559
A
WAT
562
4
HOH
HOH
562
A
WAT
566
4
HOH
HOH
566
A
WAT
568
4
HOH
HOH
568
A
WAT
572
4
HOH
HOH
572
A
WAT
574
4
HOH
HOH
574
A
WAT
575
4
HOH
HOH
575
A
WAT
576
4
HOH
HOH
576
A
WAT
577
4
HOH
HOH
577
A
WAT
579
4
HOH
HOH
579
A
WAT
584
4
HOH
HOH
584
A
WAT
585
4
HOH
HOH
585
A
WAT
586
4
HOH
HOH
586
A
WAT
587
4
HOH
HOH
587
A
WAT
588
4
HOH
HOH
588
A
WAT
591
4
HOH
HOH
591
A
WAT
593
4
HOH
HOH
593
A
WAT
594
4
HOH
HOH
594
A
WAT
595
4
HOH
HOH
595
A
WAT
601
4
HOH
HOH
601
A
WAT
602
4
HOH
HOH
602
A
WAT
603
4
HOH
HOH
603
A
WAT
607
4
HOH
HOH
607
A
WAT
608
4
HOH
HOH
608
A
WAT
609
4
HOH
HOH
609
A
WAT
612
4
HOH
HOH
612
A
WAT
617
4
HOH
HOH
617
A
WAT
618
4
HOH
HOH
618
A
WAT
622
4
HOH
HOH
622
A
WAT
626
4
HOH
HOH
626
A
WAT
629
4
HOH
HOH
629
A
WAT
631
4
HOH
HOH
631
A
WAT
632
4
HOH
HOH
632
A
WAT
633
4
HOH
HOH
633
A
WAT
634
4
HOH
HOH
634
A
WAT
635
4
HOH
HOH
635
A
WAT
636
4
HOH
HOH
636
A
WAT
637
4
HOH
HOH
637
A
WAT
642
4
HOH
HOH
642
A
WAT
643
4
HOH
HOH
643
A
WAT
644
4
HOH
HOH
644
A
WAT
646
4
HOH
HOH
646
A
WAT
650
4
HOH
HOH
650
A
WAT
656
4
HOH
HOH
656
A
WAT
657
4
HOH
HOH
657
A
WAT
665
4
HOH
HOH
665
A
WAT
669
4
HOH
HOH
669
A
WAT
670
4
HOH
HOH
670
A
WAT
674
4
HOH
HOH
674
A
WAT
677
4
HOH
HOH
677
A
WAT
680
4
HOH
HOH
680
A
WAT
681
4
HOH
HOH
681
A
WAT
696
4
HOH
HOH
696
A
WAT
699
4
HOH
HOH
699
A
WAT
702
4
HOH
HOH
702
A
WAT
707
4
HOH
HOH
707
A
WAT
716
4
HOH
HOH
716
A
WAT
718
4
HOH
HOH
718
A
WAT
719
4
HOH
HOH
719
A
WAT
723
4
HOH
HOH
723
A
WAT
724
4
HOH
HOH
724
A
WAT
728
4
HOH
HOH
728
A
WAT
733
4
HOH
HOH
733
A
WAT
735
4
HOH
HOH
735
A
WAT
736
4
HOH
HOH
736
A
WAT
738
4
HOH
HOH
738
A
WAT
739
4
HOH
HOH
739
A
WAT
740
4
HOH
HOH
740
A
WAT
741
4
HOH
HOH
741
A
WAT
742
4
HOH
HOH
742
A
WAT
743
4
HOH
HOH
743
A
WAT
751
4
HOH
HOH
751
A
WAT
752
4
HOH
HOH
752
A
WAT
753
4
HOH
HOH
753
A
WAT
754
4
HOH
HOH
754
A
THR
1
n
1
THR
1
A
TYR
2
n
2
TYR
2
A
ASN
3
n
3
ASN
3
A
GLY
4
n
4
GLY
4
A
CYS
5
n
5
CYS
5
A
SER
6
n
6
SER
6
A
SER
7
n
7
SER
7
A
SER
8
n
8
SER
8
A
GLU
9
n
9
GLU
9
A
GLN
10
n
10
GLN
10
A
SER
11
n
11
SER
11
A
ALA
12
n
12
ALA
12
A
LEU
13
n
13
LEU
13
A
ALA
14
n
14
ALA
14
A
ALA
15
n
15
ALA
15
A
ALA
16
n
16
ALA
16
A
ALA
17
n
17
ALA
17
A
SER
18
n
18
SER
18
A
ALA
19
n
19
ALA
19
A
ALA
20
n
20
ALA
20
A
GLN
21
n
21
GLN
21
A
SER
22
n
22
SER
22
A
TYR
23
n
23
TYR
23
A
VAL
24
n
24
VAL
24
A
ALA
25
n
25
ALA
25
A
GLU
26
n
26
GLU
26
A
SER
27
n
27
SER
27
A
LEU
28
n
28
LEU
28
A
SER
29
n
29
SER
29
A
TYR
30
n
30
TYR
30
A
LEU
31
n
31
LEU
31
A
GLN
32
n
32
GLN
32
A
THR
33
n
33
THR
33
A
HIS
34
n
34
HIS
34
A
THR
35
n
35
THR
35
A
ALA
36
n
36
ALA
36
A
ALA
37
n
37
ALA
37
A
THR
38
n
38
THR
38
A
PRO
39
n
39
PRO
39
A
ARG
40
n
40
ARG
40
A
TYR
41
n
41
TYR
41
A
THR
42
n
42
THR
42
A
THR
43
n
43
THR
43
A
TRP
44
n
44
TRP
44
A
PHE
45
n
45
PHE
45
A
GLY
46
n
46
GLY
46
A
SER
47
n
47
SER
47
A
TYR
48
n
48
TYR
48
A
ILE
49
n
49
ILE
49
A
SER
50
n
50
SER
50
A
SER
51
n
51
SER
51
A
ARG
52
n
52
ARG
52
A
HIS
53
n
53
HIS
53
A
SER
54
n
54
SER
54
A
THR
55
n
55
THR
55
A
VAL
56
n
56
VAL
56
A
LEU
57
n
57
LEU
57
A
GLN
58
n
58
GLN
58
A
HIS
59
n
59
HIS
59
A
TYR
60
n
60
TYR
60
A
THR
61
n
61
THR
61
A
ASP
62
n
62
ASP
62
A
MET
63
n
63
MET
63
A
ASN
64
n
64
ASN
64
A
SER
65
n
65
SER
65
A
ASN
66
n
66
ASN
66
A
ASP
67
n
67
ASP
67
A
PHE
68
n
68
PHE
68
A
SER
69
n
69
SER
69
A
SER
70
n
70
SER
70
A
TYR
71
n
71
TYR
71
A
SER
72
n
72
SER
72
A
PHE
73
n
73
PHE
73
A
ASP
74
n
74
ASP
74
A
CYS
75
n
75
CYS
75
A
THR
76
n
76
THR
76
A
CYS
77
n
77
CYS
77
A
THR
78
n
78
THR
78
A
ALA
79
n
79
ALA
79
A
ALA
80
n
80
ALA
80
A
GLY
81
n
81
GLY
81
A
THR
82
n
82
THR
82
A
PHE
83
n
83
PHE
83
A
ALA
84
n
84
ALA
84
A
TYR
85
n
85
TYR
85
A
VAL
86
n
86
VAL
86
A
TYR
87
n
87
TYR
87
A
PRO
88
n
88
PRO
88
A
ASN
89
n
89
ASN
89
A
ARG
90
n
90
ARG
90
A
PHE
91
n
91
PHE
91
A
GLY
92
n
92
GLY
92
A
THR
93
n
93
THR
93
A
VAL
94
n
94
VAL
94
A
TYR
95
n
95
TYR
95
A
LEU
96
n
96
LEU
96
A
CYS
97
n
97
CYS
97
A
GLY
98
n
98
GLY
98
A
ALA
99
n
99
ALA
99
A
PHE
100
n
100
PHE
100
A
TRP
101
n
101
TRP
101
A
LYS
102
n
102
LYS
102
A
ALA
103
n
103
ALA
103
A
PRO
104
n
104
PRO
104
A
THR
105
n
105
THR
105
A
THR
106
n
106
THR
106
A
GLY
107
n
107
GLY
107
A
THR
108
n
108
THR
108
A
ASP
109
n
109
ASP
109
A
SER
110
n
110
SER
110
A
GLN
111
n
111
GLN
111
A
ALA
112
n
112
ALA
112
A
GLY
113
n
113
GLY
113
A
THR
114
n
114
THR
114
A
LEU
115
n
115
LEU
115
A
VAL
116
n
116
VAL
116
A
HIS
117
n
117
HIS
117
A
GLU
118
n
118
GLU
118
A
SER
119
n
119
SER
119
A
SER
120
n
120
SER
120
A
HIS
121
n
121
HIS
121
A
PHE
122
n
122
PHE
122
A
THR
123
n
123
THR
123
A
ARG
124
n
124
ARG
124
A
ASN
125
n
125
ASN
125
A
GLY
126
n
126
GLY
126
A
GLY
127
n
127
GLY
127
A
THR
128
n
128
THR
128
A
LYS
129
n
129
LYS
129
A
ASP
130
n
130
ASP
130
A
TYR
131
n
131
TYR
131
A
ALA
132
n
132
ALA
132
A
TYR
133
n
133
TYR
133
A
GLY
134
n
134
GLY
134
A
GLN
135
n
135
GLN
135
A
ALA
136
n
136
ALA
136
A
ALA
137
n
137
ALA
137
A
ALA
138
n
138
ALA
138
A
LYS
139
n
139
LYS
139
A
SER
140
n
140
SER
140
A
LEU
141
n
141
LEU
141
A
ALA
142
n
142
ALA
142
A
THR
143
n
143
THR
143
A
MET
144
n
144
MET
144
A
ASP
145
n
145
ASP
145
A
PRO
146
n
146
PRO
146
A
ASP
147
n
147
ASP
147
A
LYS
148
n
148
LYS
148
A
ALA
149
n
149
ALA
149
A
VAL
150
n
150
VAL
150
A
MET
151
n
151
MET
151
A
ASN
152
n
152
ASN
152
A
ALA
153
n
153
ALA
153
A
ASP
154
n
154
ASP
154
A
ASN
155
n
155
ASN
155
A
HIS
156
n
156
HIS
156
A
GLU
157
n
157
GLU
157
A
TYR
158
n
158
TYR
158
A
PHE
159
n
159
PHE
159
A
SER
160
n
160
SER
160
A
GLU
161
n
161
GLU
161
A
ASN
162
n
162
ASN
162
A
ASN
163
n
163
ASN
163
A
PRO
164
n
164
PRO
164
A
ALA
165
n
165
ALA
165
A
GLN
166
n
166
GLN
166
A
SER
167
n
167
SER
167
A
author_defined_assembly
1
monomeric
A
HIS
117
A
NE2
HIS
117
1_555
A
ZN
200
C
ZN
ZN
1_555
A
HIS
121
A
NE2
HIS
121
1_555
104.1
A
HIS
117
A
NE2
HIS
117
1_555
A
ZN
200
C
ZN
ZN
1_555
A
ASP
130
A
OD1
ASP
130
1_555
98.2
A
HIS
121
A
NE2
HIS
121
1_555
A
ZN
200
C
ZN
ZN
1_555
A
ASP
130
A
OD1
ASP
130
1_555
95.6
A
HIS
117
A
NE2
HIS
117
1_555
A
ZN
200
C
ZN
ZN
1_555
A
ASP
130
A
OD2
ASP
130
1_555
154.2
A
HIS
121
A
NE2
HIS
121
1_555
A
ZN
200
C
ZN
ZN
1_555
A
ASP
130
A
OD2
ASP
130
1_555
84.8
A
ASP
130
A
OD1
ASP
130
1_555
A
ZN
200
C
ZN
ZN
1_555
A
ASP
130
A
OD2
ASP
130
1_555
56.4
A
HIS
117
A
NE2
HIS
117
1_555
A
ZN
200
C
ZN
ZN
1_555
A
HOH
401
D
O
HOH
1_555
98.7
A
HIS
121
A
NE2
HIS
121
1_555
A
ZN
200
C
ZN
ZN
1_555
A
HOH
401
D
O
HOH
1_555
96.1
A
ASP
130
A
OD1
ASP
130
1_555
A
ZN
200
C
ZN
ZN
1_555
A
HOH
401
D
O
HOH
1_555
156.3
A
ASP
130
A
OD2
ASP
130
1_555
A
ZN
200
C
ZN
ZN
1_555
A
HOH
401
D
O
HOH
1_555
104.4
A
HIS
117
A
NE2
HIS
117
1_555
A
ZN
200
C
ZN
ZN
1_555
A
HOH
754
D
O
HOH
1_555
101.2
A
HIS
121
A
NE2
HIS
121
1_555
A
ZN
200
C
ZN
ZN
1_555
A
HOH
754
D
O
HOH
1_555
152.0
A
ASP
130
A
OD1
ASP
130
1_555
A
ZN
200
C
ZN
ZN
1_555
A
HOH
754
D
O
HOH
1_555
92.3
A
ASP
130
A
OD2
ASP
130
1_555
A
ZN
200
C
ZN
ZN
1_555
A
HOH
754
D
O
HOH
1_555
77.4
A
HOH
401
D
O
HOH
1_555
A
ZN
200
C
ZN
ZN
1_555
A
HOH
754
D
O
HOH
1_555
68.3
A
THR
42
GLYCOSYLATION SITE
A
THR
42
THR
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ASN
3
A
N
ASN
3
A
O
PHE
73
A
O
PHE
73
A
O
SER
72
A
O
SER
72
A
N
VAL
94
A
N
VAL
94
A
N
TYR
95
A
N
TYR
95
A
O
TYR
85
A
O
TYR
85
0.229
0.218
1.6
38.3
777
15467
96644
84.3
RANDOM
1
0
0
ENGH & HUBER
1.6
38.3
201
1484
12
0
1271
0.005
1.06
15.0
1.6
38.3
1G12
96644
96644
0
0
0.069
1
21.4
6.3
84.3
0.195
1.6
1.66
749
3.8
40.9
data collection
PROCESS
data reduction
PROCESS
model building
DM
refinement
CNS
data scaling
PROCESS
(RIGAKU)
phasing
DM
PEPTIDYL-LYS METALLOENDOPEPTIDASE(E.C.3.4.24.20)
ZINC PEPTIDASE FROM GRIFOLA FRONDOSA
1
N
N
2
N
N
3
N
N
4
N
N
A
SER
6
A
SER
6
HELX_P
A
HIS
34
A
HIS
34
1
1
29
A
THR
38
A
THR
38
HELX_P
A
GLY
46
A
GLY
46
1
2
9
A
ILE
49
A
ILE
49
HELX_P
A
SER
65
A
SER
65
1
3
17
A
ASN
66
A
ASN
66
HELX_P
A
ASN
66
A
ASN
66
5
4
1
A
ASP
67
A
ASP
67
HELX_P
A
TYR
71
A
TYR
71
5
5
5
A
GLY
98
A
GLY
98
HELX_P
A
ALA
103
A
ALA
103
5
6
6
A
SER
110
A
SER
110
HELX_P
A
PHE
122
A
PHE
122
1
7
13
A
THR
123
A
THR
123
HELX_P
A
GLY
126
A
GLY
126
5
8
4
A
TYR
133
A
TYR
133
HELX_P
A
ASP
145
A
ASP
145
1
9
13
A
ASP
145
A
ASP
145
HELX_P
A
VAL
150
A
VAL
150
1
10
6
A
ASN
152
A
ASN
152
HELX_P
A
ASN
162
A
ASN
162
1
11
11
disulf
2.036
A
CYS
5
A
SG
CYS
5
1_555
A
CYS
75
A
SG
CYS
75
1_555
disulf
2.032
A
CYS
77
A
SG
CYS
77
1_555
A
CYS
97
A
SG
CYS
97
1_555
covale
1.482
one
O-Glycosylation
A
THR
42
A
OG1
THR
42
1_555
A
MAN
900
B
C1
MAN
1_555
metalc
1.996
A
HIS
117
A
NE2
HIS
117
1_555
A
ZN
200
C
ZN
ZN
1_555
metalc
2.073
A
HIS
121
A
NE2
HIS
121
1_555
A
ZN
200
C
ZN
ZN
1_555
metalc
2.140
A
ASP
130
A
OD1
ASP
130
1_555
A
ZN
200
C
ZN
ZN
1_555
metalc
2.459
A
ASP
130
A
OD2
ASP
130
1_555
A
ZN
200
C
ZN
ZN
1_555
metalc
2.258
A
ZN
200
C
ZN
ZN
1_555
A
HOH
401
D
O
HOH
1_555
metalc
2.279
A
ZN
200
C
ZN
ZN
1_555
A
HOH
754
D
O
HOH
1_555
HYDROLASE
zinc cordinate, METALLOPROTEASE, HYDROLASE
A
ASN
163
A
ASN
163
1
A
PRO
164
A
PRO
164
0.12
PLMP_GRIFR
UNP
1
1
P81054
1
167
1G12
1
167
P81054
A
1
1
167
4
parallel
parallel
anti-parallel
A
TYR
2
A
TYR
2
A
ASN
3
A
ASN
3
A
SER
72
A
SER
72
A
ASP
74
A
ASP
74
A
THR
93
A
THR
93
A
LEU
96
A
LEU
96
A
ALA
84
A
ALA
84
A
TYR
85
A
TYR
85
5
C 1 2 1