0.009515
0.005493
0.000000
0.000000
0.010987
0.000000
0.000000
0.000000
0.009560
0.00000
0.00000
0.00000
Wolfe, S.A.
Grant, R.A.
Elrod-Erickson, M.
Pabo, C.O.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
105.100
105.100
104.600
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
O
N
89
N
P
N
90
N
O
N
91
N
O
N
92
N
O
N
93
N
C
N
94
R
C
N
95
N
O
N
96
S
C
N
97
N
O
N
98
N
C
N
99
R
C
Y
100
N
N
Y
101
N
C
Y
102
N
N
Y
103
N
C
Y
104
N
C
N
105
N
N
Y
106
N
N
Y
107
N
C
Y
108
N
N
Y
109
N
C
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
O
N
125
N
P
N
126
N
O
N
127
N
O
N
128
N
O
N
129
N
C
N
130
R
C
N
131
N
O
N
132
S
C
N
133
N
O
N
134
N
C
N
135
R
C
N
136
N
N
N
137
N
C
N
138
N
O
N
139
N
N
N
140
N
C
N
141
N
N
N
142
N
C
N
143
N
C
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
P
N
160
N
O
N
161
N
O
N
162
N
O
N
163
N
C
N
164
R
C
N
165
N
O
N
166
S
C
N
167
N
O
N
168
N
C
N
169
R
C
Y
170
N
N
Y
171
N
C
Y
172
N
N
Y
173
N
C
N
174
N
C
N
175
N
O
N
176
N
N
N
177
N
C
N
178
N
N
N
179
N
N
Y
180
N
C
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
O
N
196
N
P
N
197
N
O
N
198
N
O
N
199
N
O
N
200
N
C
N
201
R
C
N
202
N
O
N
203
S
C
N
204
N
O
N
205
N
C
N
206
R
C
N
207
N
N
N
208
N
C
N
209
N
O
N
210
N
N
N
211
N
C
N
212
N
O
N
213
N
C
N
214
N
C
N
215
N
C
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
C
N
238
N
O
N
239
N
N
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
O
N
259
N
O
N
260
N
O
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
N
C
N
272
N
C
N
273
N
O
N
274
N
O
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
Y
285
N
C
Y
286
N
N
Y
287
N
C
Y
288
N
C
Y
289
N
N
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
O
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
S
C
N
309
N
C
N
310
N
C
N
311
N
C
N
312
N
O
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
N
N
327
S
C
N
328
N
C
N
329
N
O
N
330
N
C
N
331
N
C
N
332
N
C
N
333
N
C
N
334
N
O
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
N
353
N
C
N
354
N
C
N
355
N
C
N
356
N
N
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
N
N
374
S
C
N
375
N
C
N
376
N
O
N
377
N
C
N
378
N
C
N
379
N
S
N
380
N
C
N
381
N
O
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
N
N
394
S
C
N
395
N
C
N
396
N
O
N
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
N
404
N
O
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
N
N
417
S
C
N
418
N
C
N
419
N
O
N
420
N
C
N
421
N
C
N
422
N
C
N
423
N
O
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
N
N
434
S
C
N
435
N
C
N
436
N
O
N
437
N
C
N
438
N
O
N
439
N
O
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
N
N
448
S
C
N
449
N
C
N
450
N
O
N
451
R
C
N
452
N
O
N
453
N
C
N
454
N
O
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
N
N
465
S
C
N
466
N
C
N
467
N
O
N
468
N
C
Y
469
N
C
Y
470
N
C
Y
471
N
C
Y
472
N
C
Y
473
N
C
Y
474
N
C
N
475
N
O
N
476
N
O
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
N
N
489
S
C
N
490
N
C
N
491
N
O
N
492
N
C
N
493
N
C
N
494
N
C
N
495
N
O
N
496
N
H
N
497
N
H
N
498
N
H
N
499
N
H
N
500
N
H
N
501
N
H
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
doub
N
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
Y
179
N
sing
Y
180
N
sing
Y
181
N
doub
N
182
N
sing
Y
183
N
sing
N
184
N
sing
Y
185
N
doub
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
doub
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
doub
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
doub
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
Y
289
N
sing
Y
290
N
doub
Y
291
N
doub
N
292
N
sing
Y
293
N
sing
N
294
N
sing
Y
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
doub
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
doub
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
doub
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
Y
397
N
doub
Y
398
N
sing
Y
399
N
sing
N
400
N
sing
Y
401
N
doub
N
402
N
sing
Y
403
N
doub
N
404
N
sing
Y
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
doub
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
doub
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
doub
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
doub
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
Y
466
N
doub
Y
467
N
sing
Y
468
N
sing
N
469
N
sing
Y
470
N
doub
N
471
N
sing
Y
472
N
doub
N
473
N
sing
Y
474
N
sing
N
475
N
sing
N
476
N
sing
N
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
doub
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
sing
N
495
N
sing
N
496
N
sing
UK
Structure
STRUE6
2005
0969-2126
9
717
723
10.1016/S0969-2126(01)00632-3
11587646
Beyond the "recognition code": structures of two Cys2His2 zinc finger/TATA box complexes.
2001
US
Science
SCIEAS
0038
0036-8075
275
657
661
10.1126/science.275.5300.657
A General Strategy for Selecting High-Affinity Zinc Finger Proteins for Diverse DNA Target Sites
1997
UK
Structure
STRUE6
2005
0969-2126
4
1171
1180
10.1016/S0969-2126(96)00125-6
Zif268 protein-DNA complex refined at 1.6 A: a model system for understanding zinc finger-DNA interactions
1996
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
285
1917
1934
10.1006/jmbi.1998.2421
Analysis of Zinc Fingers Optimized via Phage Display: Evaluating the Utility of a Recognition Code
1999
10.2210/pdb1g2d/pdb
pdb_00001g2d
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
130
1
Yale mirrors
IMAGE PLATE
2000-04-27
RIGAKU RAXIS IV
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
4980.269
5'-D(*GP*AP*CP*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*AP*G)-3'
2
syn
polymer
4815.126
5'-D(*TP*CP*CP*TP*TP*TP*TP*AP*TP*AP*GP*CP*GP*TP*CP*C)-3'
2
syn
polymer
10713.330
TATA BOX ZINC FINGER PROTEIN
2
man
polymer
65.409
ZINC ION
6
syn
non-polymer
18.015
water
224
nat
water
no
no
(DG)(DA)(DC)(DG)(DC)(DT)(DA)(DT)(DA)(DA)(DA)(DA)(DG)(DG)(DA)(DG)
GACGCTATAAAAGGAG
A,D
polydeoxyribonucleotide
no
no
(DT)(DC)(DC)(DT)(DT)(DT)(DT)(DA)(DT)(DA)(DG)(DC)(DG)(DT)(DC)(DC)
TCCTTTTATAGCGTCC
B,E
polydeoxyribonucleotide
no
no
MERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGRKFATLHTRDR
HTKIHLRQKD
MERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGRKFATLHTRDR
HTKIHLRQKD
C,F
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
Escherichia
Escherichia coli
sample
PROTEIN SELECTED BY PHAGE DISPLAY;
10090
Mus musculus
469008
Escherichia coli BL21(DE3)
BL21DE3
PLASMID
PET21D
1
3.99
69.20
VAPOR DIFFUSION, HANGING DROP
8
PEG 400, NaCl, Bis-Tris Propane, CoCl2, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
PEG 400
1
NaCl
1
Bis-Tris Propane
1
CoCl2
1
-5.245
1
20
B
18
A
16
3.470
B_DT18:DA16_A
1
-11.257
0.245
-0.013
-0.354
3.850
1
19
B
19
A
15
-0.410
B_DC19:DG15_A
2
-2.984
-0.440
-0.221
-0.134
6.973
1
19
B
20
A
14
1.194
B_DC20:DG14_A
3
-10.195
-0.142
-0.188
-0.279
-4.610
1
20
B
21
A
13
1.429
B_DT21:DA13_A
4
-12.477
-0.088
0.047
-0.283
-0.834
1
20
B
22
A
12
6.333
B_DT22:DA12_A
5
-10.742
0.146
-0.141
-0.166
-3.212
1
B
23
A
11
10.213
B_DT23:DA11_A
6
-11.153
0.150
0.128
0.176
-0.792
1
20
B
24
A
10
6.469
B_DT24:DA10_A
7
-9.487
-0.104
-0.143
-0.115
-10.790
1
20
B
25
A
9
7.154
B_DA25:DT9_A
8
-4.086
-0.114
-0.004
-0.198
-11.533
1
20
B
26
A
8
7.493
B_DT26:DA8_A
9
-6.258
-0.103
0.258
-0.045
-4.697
1
20
B
27
A
7
-3.890
B_DA27:DT7_A
10
0.318
0.820
-0.154
-0.207
-2.687
1
19
B
28
A
6
1.740
B_DG28:DC6_A
11
-0.493
-0.204
-0.093
-0.279
-2.630
1
19
B
29
A
5
-1.067
B_DC29:DG5_A
12
-8.666
0.259
0.200
-0.301
-1.913
1
19
B
30
A
4
2.537
B_DG30:DC4_A
13
-3.153
0.151
0.083
-0.132
6.735
1
20
B
31
A
3
4.787
B_DT31:DA3_A
14
-5.677
0.041
-0.041
-0.075
12.891
1
19
B
32
A
2
2.991
B_DC32:DG2_A
15
-15.676
0.174
-0.484
-0.275
-7.598
1
19
B
33
D
67
-3.020
B_DC33:DG67_D
16
-5.868
0.275
0.313
-0.362
-3.648
1
20
E
68
D
66
4.223
E_DT68:DA66_D
17
-10.899
-0.041
0.016
-0.296
5.530
1
19
E
69
D
65
2.513
E_DC69:DG65_D
18
-5.669
0.149
-0.269
-0.179
4.954
1
19
E
70
D
64
1.408
E_DC70:DG64_D
19
-6.866
0.431
0.090
-0.426
-1.452
1
20
E
71
D
63
0.742
E_DT71:DA63_D
20
-11.504
-0.111
0.180
-0.217
1.937
1
20
E
72
D
62
1.695
E_DT72:DA62_D
21
-11.901
-0.256
-0.128
-0.157
-4.925
1
20
E
73
D
61
7.402
E_DT73:DA61_D
22
-6.595
-0.293
0.170
-0.227
-1.320
1
20
E
74
D
60
7.037
E_DT74:DA60_D
23
-9.168
-0.083
-0.054
-0.108
-7.831
1
20
E
75
D
59
4.978
E_DA75:DT59_D
24
-6.678
-0.036
-0.065
-0.131
-10.041
1
20
E
76
D
58
6.847
E_DT76:DA58_D
25
-5.225
-0.194
0.198
-0.054
-4.195
1
20
E
77
D
57
-5.569
E_DA77:DT57_D
26
-2.532
0.440
-0.023
-0.037
-1.595
1
19
E
78
D
56
2.511
E_DG78:DC56_D
27
0.801
-0.104
0.114
-0.313
0.414
1
19
E
79
D
55
1.599
E_DC79:DG55_D
28
-9.065
0.333
0.270
-0.260
0.361
1
19
E
80
D
54
1.791
E_DG80:DC54_D
29
-0.249
-0.523
0.350
-0.049
1.798
1
20
E
81
D
53
-1.787
E_DT81:DA53_D
30
-5.355
-0.008
0.257
0.030
8.254
1
19
E
82
D
52
2.739
E_DC82:DG52_D
31
-11.909
0.076
-0.358
-0.172
3.062
30.461
B
B
18
19
10.056
A
A
16
15
3.089
5.250
0.092
0.134
BB_DT18DC19:DG15DA16_AA
1
2.963
-5.675
29.873
-0.740
0.387
3.202
31.319
B
B
19
20
10.199
A
A
15
14
3.280
5.477
0.216
-0.214
BB_DC19DC20:DG14DG15_AA
2
1.265
-2.355
30.823
-1.429
-0.161
3.568
39.596
B
B
20
21
2.225
A
A
14
13
3.588
1.507
0.383
-0.571
BB_DC20DT21:DA13DG14_AA
3
0.421
-0.621
39.566
-1.036
-0.511
3.258
33.410
B
B
21
22
-3.252
A
A
13
12
3.208
-1.868
0.323
-0.776
BB_DT21DT22:DA12DA13_AA
4
1.795
-3.126
33.313
-1.043
-0.268
3.476
31.686
B
B
22
23
-7.747
A
A
12
11
3.387
-4.213
-0.223
-0.860
BB_DT22DT23:DA11DA12_AA
5
-2.873
5.284
31.284
-0.754
-0.151
3.191
34.533
B
B
23
24
-0.120
A
A
11
10
3.201
-0.071
-0.218
-0.554
BB_DT23DT24:DA10DA11_AA
6
1.445
-2.434
34.504
-0.923
0.585
3.464
39.096
B
B
24
25
2.352
A
A
10
9
3.514
1.572
0.167
-0.555
BB_DT24DA25:DT9DA10_AA
7
-3.313
4.958
38.930
-1.031
-0.675
3.495
28.304
B
B
25
26
-5.612
A
A
9
8
3.425
-2.739
-0.497
-0.721
BB_DA25DT26:DA8DT9_AA
8
-1.184
2.425
28.149
-0.802
0.726
3.050
38.270
B
B
26
27
6.305
A
A
8
7
3.201
4.125
-0.875
-0.830
BB_DT26DA27:DT7DA8_AA
9
1.962
-2.999
38.007
-1.762
1.571
3.423
24.647
B
B
27
28
-4.053
A
A
7
6
3.382
-1.729
0.609
-0.592
BB_DA27DG28:DC6DT7_AA
10
0.337
-0.791
24.585
-0.835
-1.319
3.434
33.451
B
B
28
29
0.526
A
A
6
5
3.404
0.303
-0.727
-0.560
BB_DG28DC29:DG5DC6_AA
11
-1.877
3.263
33.398
-1.025
0.939
3.358
39.880
B
B
29
30
6.452
A
A
5
4
3.262
4.388
1.029
0.394
BB_DC29DG30:DC4DG5_AA
12
3.388
-4.983
39.508
0.063
-1.111
3.059
26.994
B
B
30
31
6.152
A
A
4
3
3.108
2.867
-0.188
-0.286
BB_DG30DT31:DA3DC4_AA
13
0.248
-0.533
26.843
-1.303
0.462
3.055
32.711
B
B
31
32
6.467
A
A
3
2
3.122
3.632
-0.655
0.008
BB_DT31DC32:DG2DA3_AA
14
2.203
-3.922
32.441
-0.580
1.524
3.668
42.801
B
B
32
33
5.639
A
D
2
67
3.779
4.104
0.189
-0.699
BB_DC32DC33:DG67DG2_DA
15
-3.997
5.492
42.434
-1.426
-0.715
3.157
31.936
B
E
33
68
6.052
D
D
67
66
3.206
3.319
0.149
-0.323
BE_DC33DT68:DA66DG67_DD
16
3.078
-5.612
31.622
-1.176
0.275
3.102
34.350
E
E
68
69
8.727
D
D
66
65
3.124
5.130
0.022
0.133
EE_DT68DC69:DG65DA66_DD
17
2.895
-4.926
33.856
-0.545
0.397
3.307
33.792
E
E
69
70
7.910
D
D
65
64
3.392
4.582
0.453
-0.205
EE_DC69DC70:DG64DG65_DD
18
-1.805
3.116
33.442
-1.116
-1.079
3.459
36.176
E
E
70
71
-1.291
D
D
64
63
3.438
-0.801
0.192
-0.758
EE_DC70DT71:DA63DG64_DD
19
2.060
-3.319
36.111
-1.102
-0.003
3.251
31.350
E
E
71
72
-6.747
D
D
63
62
3.166
-3.631
0.242
-0.871
EE_DT71DT72:DA62DA63_DD
20
3.487
-6.479
30.953
-0.937
0.200
3.570
33.085
E
E
72
73
-5.940
D
D
62
61
3.518
-3.373
0.000
-0.838
EE_DT72DT73:DA61DA62_DD
21
-2.922
5.147
32.791
-0.852
-0.538
3.131
36.803
E
E
73
74
-0.039
D
D
61
60
3.139
-0.024
-0.192
-0.703
EE_DT73DT74:DA60DA61_DD
22
1.380
-2.186
36.778
-1.110
0.484
3.459
38.561
E
E
74
75
0.345
D
D
60
59
3.468
0.228
0.108
-0.441
EE_DT74DA75:DT59DA60_DD
23
-1.438
2.178
38.534
-0.697
-0.351
3.479
28.018
E
E
75
76
-1.861
D
D
59
58
3.439
-0.900
-0.388
-0.761
EE_DA75DT76:DA58DT59_DD
24
-1.770
3.658
27.949
-1.346
0.359
3.141
36.081
E
E
76
77
4.620
D
D
58
57
3.262
2.858
-0.896
-0.835
EE_DT76DA77:DT57DA58_DD
25
1.827
-2.953
35.927
-1.745
1.701
3.447
27.852
E
E
77
78
-5.562
D
D
57
56
3.400
-2.673
0.862
-0.753
EE_DA77DG78:DC56DT57_DD
26
-0.263
0.547
27.724
-0.893
-1.856
3.209
34.763
E
E
78
79
6.344
D
D
56
55
3.276
3.783
-0.702
-0.588
EE_DG78DC79:DG55DC56_DD
27
-0.706
1.185
34.556
-1.559
1.067
3.301
34.122
E
E
79
80
-0.233
D
D
55
54
3.289
-0.136
0.880
0.430
EE_DC79DG80:DC54DG55_DD
28
0.602
-1.026
34.117
0.754
-1.403
3.207
31.246
E
E
80
81
9.718
D
D
54
53
3.345
5.211
-0.385
-0.592
EE_DG80DT81:DA53DC54_DD
29
-0.264
0.493
30.818
-2.096
0.664
3.090
31.236
E
E
81
82
2.757
D
D
53
52
3.143
1.479
-0.135
-0.044
EE_DT81DC82:DG52DA53_DD
30
4.346
-8.100
30.905
-0.351
1.041
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_site
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2001-09-07
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-10-04
1
4
2024-02-07
1
5
2024-04-03
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
1AAY contains the 1.6 A structure of Zif268
Structure of a Cys2His2 Zinc Finger/TATA Box Complex (TATAzf;Clone #6)
RCSB
Y
RCSB
2000-10-18
REL
ZN
ZINC ION
HOH
water
TATA structure of clone #6 solved by MIRAS
Other
experimental model
ZN
301
4
ZN
ZN
301
C
ZN
302
4
ZN
ZN
302
C
ZN
303
4
ZN
ZN
303
C
ZN
304
4
ZN
ZN
304
F
ZN
305
4
ZN
ZN
305
F
ZN
306
4
ZN
ZN
306
F
HOH
1008
5
HOH
HOH
1008
A
HOH
1010
5
HOH
HOH
1010
A
HOH
1011
5
HOH
HOH
1011
A
HOH
1032
5
HOH
HOH
1032
A
HOH
1035
5
HOH
HOH
1035
A
HOH
1042
5
HOH
HOH
1042
A
HOH
1060
5
HOH
HOH
1060
A
HOH
1074
5
HOH
HOH
1074
A
HOH
1089
5
HOH
HOH
1089
A
HOH
1120
5
HOH
HOH
1120
A
HOH
1121
5
HOH
HOH
1121
A
HOH
1209
5
HOH
HOH
1209
A
HOH
1226
5
HOH
HOH
1226
A
HOH
1231
5
HOH
HOH
1231
A
HOH
1240
5
HOH
HOH
1240
A
HOH
1253
5
HOH
HOH
1253
A
HOH
1254
5
HOH
HOH
1254
A
HOH
1258
5
HOH
HOH
1258
A
HOH
1302
5
HOH
HOH
1302
A
HOH
1307
5
HOH
HOH
1307
A
HOH
1308
5
HOH
HOH
1308
A
HOH
1311
5
HOH
HOH
1311
A
HOH
1332
5
HOH
HOH
1332
A
HOH
1422
5
HOH
HOH
1422
A
HOH
1424
5
HOH
HOH
1424
A
HOH
1426
5
HOH
HOH
1426
A
HOH
1515
5
HOH
HOH
1515
A
HOH
1541
5
HOH
HOH
1541
A
HOH
1007
5
HOH
HOH
1007
B
HOH
1014
5
HOH
HOH
1014
B
HOH
1016
5
HOH
HOH
1016
B
HOH
1026
5
HOH
HOH
1026
B
HOH
1027
5
HOH
HOH
1027
B
HOH
1028
5
HOH
HOH
1028
B
HOH
1045
5
HOH
HOH
1045
B
HOH
1047
5
HOH
HOH
1047
B
HOH
1048
5
HOH
HOH
1048
B
HOH
1059
5
HOH
HOH
1059
B
HOH
1084
5
HOH
HOH
1084
B
HOH
1092
5
HOH
HOH
1092
B
HOH
1100
5
HOH
HOH
1100
B
HOH
1208
5
HOH
HOH
1208
B
HOH
1211
5
HOH
HOH
1211
B
HOH
1212
5
HOH
HOH
1212
B
HOH
1214
5
HOH
HOH
1214
B
HOH
1216
5
HOH
HOH
1216
B
HOH
1220
5
HOH
HOH
1220
B
HOH
1225
5
HOH
HOH
1225
B
HOH
1233
5
HOH
HOH
1233
B
HOH
1242
5
HOH
HOH
1242
B
HOH
1267
5
HOH
HOH
1267
B
HOH
1301
5
HOH
HOH
1301
B
HOH
1305
5
HOH
HOH
1305
B
HOH
1336
5
HOH
HOH
1336
B
HOH
1401
5
HOH
HOH
1401
B
HOH
1402
5
HOH
HOH
1402
B
HOH
1421
5
HOH
HOH
1421
B
HOH
1433
5
HOH
HOH
1433
B
HOH
1435
5
HOH
HOH
1435
B
HOH
1526
5
HOH
HOH
1526
B
HOH
1531
5
HOH
HOH
1531
B
HOH
1539
5
HOH
HOH
1539
B
HOH
1018
5
HOH
HOH
1018
D
HOH
1030
5
HOH
HOH
1030
D
HOH
1036
5
HOH
HOH
1036
D
HOH
1039
5
HOH
HOH
1039
D
HOH
1050
5
HOH
HOH
1050
D
HOH
1055
5
HOH
HOH
1055
D
HOH
1057
5
HOH
HOH
1057
D
HOH
1076
5
HOH
HOH
1076
D
HOH
1081
5
HOH
HOH
1081
D
HOH
1085
5
HOH
HOH
1085
D
HOH
1088
5
HOH
HOH
1088
D
HOH
1096
5
HOH
HOH
1096
D
HOH
1103
5
HOH
HOH
1103
D
HOH
1115
5
HOH
HOH
1115
D
HOH
1203
5
HOH
HOH
1203
D
HOH
1215
5
HOH
HOH
1215
D
HOH
1217
5
HOH
HOH
1217
D
HOH
1218
5
HOH
HOH
1218
D
HOH
1232
5
HOH
HOH
1232
D
HOH
1261
5
HOH
HOH
1261
D
HOH
1403
5
HOH
HOH
1403
D
HOH
1408
5
HOH
HOH
1408
D
HOH
1431
5
HOH
HOH
1431
D
HOH
1511
5
HOH
HOH
1511
D
HOH
1521
5
HOH
HOH
1521
D
HOH
1522
5
HOH
HOH
1522
D
HOH
1009
5
HOH
HOH
1009
E
HOH
1017
5
HOH
HOH
1017
E
HOH
1020
5
HOH
HOH
1020
E
HOH
1022
5
HOH
HOH
1022
E
HOH
1023
5
HOH
HOH
1023
E
HOH
1031
5
HOH
HOH
1031
E
HOH
1040
5
HOH
HOH
1040
E
HOH
1046
5
HOH
HOH
1046
E
HOH
1051
5
HOH
HOH
1051
E
HOH
1056
5
HOH
HOH
1056
E
HOH
1064
5
HOH
HOH
1064
E
HOH
1107
5
HOH
HOH
1107
E
HOH
1124
5
HOH
HOH
1124
E
HOH
1201
5
HOH
HOH
1201
E
HOH
1221
5
HOH
HOH
1221
E
HOH
1229
5
HOH
HOH
1229
E
HOH
1236
5
HOH
HOH
1236
E
HOH
1244
5
HOH
HOH
1244
E
HOH
1247
5
HOH
HOH
1247
E
HOH
1255
5
HOH
HOH
1255
E
HOH
1257
5
HOH
HOH
1257
E
HOH
1259
5
HOH
HOH
1259
E
HOH
1263
5
HOH
HOH
1263
E
HOH
1318
5
HOH
HOH
1318
E
HOH
1331
5
HOH
HOH
1331
E
HOH
1335
5
HOH
HOH
1335
E
HOH
1411
5
HOH
HOH
1411
E
HOH
1423
5
HOH
HOH
1423
E
HOH
1503
5
HOH
HOH
1503
E
HOH
1508
5
HOH
HOH
1508
E
HOH
1519
5
HOH
HOH
1519
E
HOH
1524
5
HOH
HOH
1524
E
HOH
1527
5
HOH
HOH
1527
E
HOH
1534
5
HOH
HOH
1534
E
HOH
1551
5
HOH
HOH
1551
E
HOH
1003
5
HOH
HOH
1003
C
HOH
1005
5
HOH
HOH
1005
C
HOH
1012
5
HOH
HOH
1012
C
HOH
1021
5
HOH
HOH
1021
C
HOH
1024
5
HOH
HOH
1024
C
HOH
1025
5
HOH
HOH
1025
C
HOH
1033
5
HOH
HOH
1033
C
HOH
1034
5
HOH
HOH
1034
C
HOH
1041
5
HOH
HOH
1041
C
HOH
1044
5
HOH
HOH
1044
C
HOH
1049
5
HOH
HOH
1049
C
HOH
1054
5
HOH
HOH
1054
C
HOH
1061
5
HOH
HOH
1061
C
HOH
1066
5
HOH
HOH
1066
C
HOH
1071
5
HOH
HOH
1071
C
HOH
1075
5
HOH
HOH
1075
C
HOH
1095
5
HOH
HOH
1095
C
HOH
1114
5
HOH
HOH
1114
C
HOH
1117
5
HOH
HOH
1117
C
HOH
1204
5
HOH
HOH
1204
C
HOH
1205
5
HOH
HOH
1205
C
HOH
1206
5
HOH
HOH
1206
C
HOH
1210
5
HOH
HOH
1210
C
HOH
1219
5
HOH
HOH
1219
C
HOH
1222
5
HOH
HOH
1222
C
HOH
1230
5
HOH
HOH
1230
C
HOH
1243
5
HOH
HOH
1243
C
HOH
1269
5
HOH
HOH
1269
C
HOH
1270
5
HOH
HOH
1270
C
HOH
1306
5
HOH
HOH
1306
C
HOH
1309
5
HOH
HOH
1309
C
HOH
1317
5
HOH
HOH
1317
C
HOH
1322
5
HOH
HOH
1322
C
HOH
1326
5
HOH
HOH
1326
C
HOH
1327
5
HOH
HOH
1327
C
HOH
1330
5
HOH
HOH
1330
C
HOH
1425
5
HOH
HOH
1425
C
HOH
1432
5
HOH
HOH
1432
C
HOH
1501
5
HOH
HOH
1501
C
HOH
1506
5
HOH
HOH
1506
C
HOH
1507
5
HOH
HOH
1507
C
HOH
1512
5
HOH
HOH
1512
C
HOH
1516
5
HOH
HOH
1516
C
HOH
1523
5
HOH
HOH
1523
C
HOH
1525
5
HOH
HOH
1525
C
HOH
1529
5
HOH
HOH
1529
C
HOH
1535
5
HOH
HOH
1535
C
HOH
1540
5
HOH
HOH
1540
C
HOH
1542
5
HOH
HOH
1542
C
HOH
1553
5
HOH
HOH
1553
C
HOH
1001
5
HOH
HOH
1001
F
HOH
1002
5
HOH
HOH
1002
F
HOH
1004
5
HOH
HOH
1004
F
HOH
1006
5
HOH
HOH
1006
F
HOH
1013
5
HOH
HOH
1013
F
HOH
1015
5
HOH
HOH
1015
F
HOH
1019
5
HOH
HOH
1019
F
HOH
1029
5
HOH
HOH
1029
F
HOH
1037
5
HOH
HOH
1037
F
HOH
1038
5
HOH
HOH
1038
F
HOH
1043
5
HOH
HOH
1043
F
HOH
1062
5
HOH
HOH
1062
F
HOH
1063
5
HOH
HOH
1063
F
HOH
1065
5
HOH
HOH
1065
F
HOH
1067
5
HOH
HOH
1067
F
HOH
1068
5
HOH
HOH
1068
F
HOH
1069
5
HOH
HOH
1069
F
HOH
1070
5
HOH
HOH
1070
F
HOH
1077
5
HOH
HOH
1077
F
HOH
1078
5
HOH
HOH
1078
F
HOH
1080
5
HOH
HOH
1080
F
HOH
1082
5
HOH
HOH
1082
F
HOH
1087
5
HOH
HOH
1087
F
HOH
1091
5
HOH
HOH
1091
F
HOH
1097
5
HOH
HOH
1097
F
HOH
1104
5
HOH
HOH
1104
F
HOH
1106
5
HOH
HOH
1106
F
HOH
1202
5
HOH
HOH
1202
F
HOH
1207
5
HOH
HOH
1207
F
HOH
1228
5
HOH
HOH
1228
F
HOH
1235
5
HOH
HOH
1235
F
HOH
1241
5
HOH
HOH
1241
F
HOH
1248
5
HOH
HOH
1248
F
HOH
1249
5
HOH
HOH
1249
F
HOH
1256
5
HOH
HOH
1256
F
HOH
1260
5
HOH
HOH
1260
F
HOH
1266
5
HOH
HOH
1266
F
HOH
1268
5
HOH
HOH
1268
F
HOH
1271
5
HOH
HOH
1271
F
HOH
1303
5
HOH
HOH
1303
F
HOH
1304
5
HOH
HOH
1304
F
HOH
1310
5
HOH
HOH
1310
F
HOH
1316
5
HOH
HOH
1316
F
HOH
1320
5
HOH
HOH
1320
F
HOH
1406
5
HOH
HOH
1406
F
HOH
1410
5
HOH
HOH
1410
F
HOH
1434
5
HOH
HOH
1434
F
HOH
1502
5
HOH
HOH
1502
F
HOH
1504
5
HOH
HOH
1504
F
HOH
1514
5
HOH
HOH
1514
F
HOH
1517
5
HOH
HOH
1517
F
G
2
n
1
DG
2
A
A
3
n
2
DA
3
A
C
4
n
3
DC
4
A
G
5
n
4
DG
5
A
C
6
n
5
DC
6
A
T
7
n
6
DT
7
A
A
8
n
7
DA
8
A
T
9
n
8
DT
9
A
A
10
n
9
DA
10
A
A
11
n
10
DA
11
A
A
12
n
11
DA
12
A
A
13
n
12
DA
13
A
G
14
n
13
DG
14
A
G
15
n
14
DG
15
A
A
16
n
15
DA
16
A
G
17
n
16
DG
17
A
T
18
n
1
DT
18
B
C
19
n
2
DC
19
B
C
20
n
3
DC
20
B
T
21
n
4
DT
21
B
T
22
n
5
DT
22
B
T
23
n
6
DT
23
B
T
24
n
7
DT
24
B
A
25
n
8
DA
25
B
T
26
n
9
DT
26
B
A
27
n
10
DA
27
B
G
28
n
11
DG
28
B
C
29
n
12
DC
29
B
G
30
n
13
DG
30
B
T
31
n
14
DT
31
B
C
32
n
15
DC
32
B
C
33
n
16
DC
33
B
G
52
n
1
DG
52
D
A
53
n
2
DA
53
D
C
54
n
3
DC
54
D
G
55
n
4
DG
55
D
C
56
n
5
DC
56
D
T
57
n
6
DT
57
D
A
58
n
7
DA
58
D
T
59
n
8
DT
59
D
A
60
n
9
DA
60
D
A
61
n
10
DA
61
D
A
62
n
11
DA
62
D
A
63
n
12
DA
63
D
G
64
n
13
DG
64
D
G
65
n
14
DG
65
D
A
66
n
15
DA
66
D
G
67
n
16
DG
67
D
T
68
n
1
DT
68
E
C
69
n
2
DC
69
E
C
70
n
3
DC
70
E
T
71
n
4
DT
71
E
T
72
n
5
DT
72
E
T
73
n
6
DT
73
E
T
74
n
7
DT
74
E
A
75
n
8
DA
75
E
T
76
n
9
DT
76
E
A
77
n
10
DA
77
E
G
78
n
11
DG
78
E
C
79
n
12
DC
79
E
G
80
n
13
DG
80
E
T
81
n
14
DT
81
E
C
82
n
15
DC
82
E
C
83
n
16
DC
83
E
MET
101
n
1
MET
101
C
GLU
102
n
2
GLU
102
C
ARG
103
n
3
ARG
103
C
PRO
104
n
4
PRO
104
C
TYR
105
n
5
TYR
105
C
ALA
106
n
6
ALA
106
C
CYS
107
n
7
CYS
107
C
PRO
108
n
8
PRO
108
C
VAL
109
n
9
VAL
109
C
GLU
110
n
10
GLU
110
C
SER
111
n
11
SER
111
C
CYS
112
n
12
CYS
112
C
ASP
113
n
13
ASP
113
C
ARG
114
n
14
ARG
114
C
ARG
115
n
15
ARG
115
C
PHE
116
n
16
PHE
116
C
SER
117
n
17
SER
117
C
GLN
118
n
18
GLN
118
C
LYS
119
n
19
LYS
119
C
THR
120
n
20
THR
120
C
ASN
121
n
21
ASN
121
C
LEU
122
n
22
LEU
122
C
ASP
123
n
23
ASP
123
C
THR
124
n
24
THR
124
C
HIS
125
n
25
HIS
125
C
ILE
126
n
26
ILE
126
C
ARG
127
n
27
ARG
127
C
ILE
128
n
28
ILE
128
C
HIS
129
n
29
HIS
129
C
THR
130
n
30
THR
130
C
GLY
131
n
31
GLY
131
C
GLN
132
n
32
GLN
132
C
LYS
133
n
33
LYS
133
C
PRO
134
n
34
PRO
134
C
PHE
135
n
35
PHE
135
C
GLN
136
n
36
GLN
136
C
CYS
137
n
37
CYS
137
C
ARG
138
n
38
ARG
138
C
ILE
139
n
39
ILE
139
C
CYS
140
n
40
CYS
140
C
MET
141
n
41
MET
141
C
ARG
142
n
42
ARG
142
C
ASN
143
n
43
ASN
143
C
PHE
144
n
44
PHE
144
C
SER
145
n
45
SER
145
C
GLN
146
n
46
GLN
146
C
HIS
147
n
47
HIS
147
C
THR
148
n
48
THR
148
C
GLY
149
n
49
GLY
149
C
LEU
150
n
50
LEU
150
C
ASN
151
n
51
ASN
151
C
GLN
152
n
52
GLN
152
C
HIS
153
n
53
HIS
153
C
ILE
154
n
54
ILE
154
C
ARG
155
n
55
ARG
155
C
THR
156
n
56
THR
156
C
HIS
157
n
57
HIS
157
C
THR
158
n
58
THR
158
C
GLY
159
n
59
GLY
159
C
GLU
160
n
60
GLU
160
C
LYS
161
n
61
LYS
161
C
PRO
162
n
62
PRO
162
C
PHE
163
n
63
PHE
163
C
ALA
164
n
64
ALA
164
C
CYS
165
n
65
CYS
165
C
ASP
166
n
66
ASP
166
C
ILE
167
n
67
ILE
167
C
CYS
168
n
68
CYS
168
C
GLY
169
n
69
GLY
169
C
ARG
170
n
70
ARG
170
C
LYS
171
n
71
LYS
171
C
PHE
172
n
72
PHE
172
C
ALA
173
n
73
ALA
173
C
THR
174
n
74
THR
174
C
LEU
175
n
75
LEU
175
C
HIS
176
n
76
HIS
176
C
THR
177
n
77
THR
177
C
ARG
178
n
78
ARG
178
C
ASP
179
n
79
ASP
179
C
ARG
180
n
80
ARG
180
C
HIS
181
n
81
HIS
181
C
THR
182
n
82
THR
182
C
LYS
183
n
83
LYS
183
C
ILE
184
n
84
ILE
184
C
HIS
185
n
85
HIS
185
C
LEU
186
n
86
LEU
186
C
ARG
187
n
87
ARG
187
C
GLN
188
n
88
GLN
188
C
LYS
189
n
89
LYS
189
C
n
90
190
C
MET
201
n
1
MET
201
F
GLU
202
n
2
GLU
202
F
ARG
203
n
3
ARG
203
F
PRO
204
n
4
PRO
204
F
TYR
205
n
5
TYR
205
F
ALA
206
n
6
ALA
206
F
CYS
207
n
7
CYS
207
F
PRO
208
n
8
PRO
208
F
VAL
209
n
9
VAL
209
F
GLU
210
n
10
GLU
210
F
SER
211
n
11
SER
211
F
CYS
212
n
12
CYS
212
F
ASP
213
n
13
ASP
213
F
ARG
214
n
14
ARG
214
F
ARG
215
n
15
ARG
215
F
PHE
216
n
16
PHE
216
F
SER
217
n
17
SER
217
F
GLN
218
n
18
GLN
218
F
LYS
219
n
19
LYS
219
F
THR
220
n
20
THR
220
F
ASN
221
n
21
ASN
221
F
LEU
222
n
22
LEU
222
F
ASP
223
n
23
ASP
223
F
THR
224
n
24
THR
224
F
HIS
225
n
25
HIS
225
F
ILE
226
n
26
ILE
226
F
ARG
227
n
27
ARG
227
F
ILE
228
n
28
ILE
228
F
HIS
229
n
29
HIS
229
F
THR
230
n
30
THR
230
F
GLY
231
n
31
GLY
231
F
GLN
232
n
32
GLN
232
F
LYS
233
n
33
LYS
233
F
PRO
234
n
34
PRO
234
F
PHE
235
n
35
PHE
235
F
GLN
236
n
36
GLN
236
F
CYS
237
n
37
CYS
237
F
ARG
238
n
38
ARG
238
F
ILE
239
n
39
ILE
239
F
CYS
240
n
40
CYS
240
F
MET
241
n
41
MET
241
F
ARG
242
n
42
ARG
242
F
ASN
243
n
43
ASN
243
F
PHE
244
n
44
PHE
244
F
SER
245
n
45
SER
245
F
GLN
246
n
46
GLN
246
F
HIS
247
n
47
HIS
247
F
THR
248
n
48
THR
248
F
GLY
249
n
49
GLY
249
F
LEU
250
n
50
LEU
250
F
ASN
251
n
51
ASN
251
F
GLN
252
n
52
GLN
252
F
HIS
253
n
53
HIS
253
F
ILE
254
n
54
ILE
254
F
ARG
255
n
55
ARG
255
F
THR
256
n
56
THR
256
F
HIS
257
n
57
HIS
257
F
THR
258
n
58
THR
258
F
GLY
259
n
59
GLY
259
F
GLU
260
n
60
GLU
260
F
LYS
261
n
61
LYS
261
F
PRO
262
n
62
PRO
262
F
PHE
263
n
63
PHE
263
F
ALA
264
n
64
ALA
264
F
CYS
265
n
65
CYS
265
F
ASP
266
n
66
ASP
266
F
ILE
267
n
67
ILE
267
F
CYS
268
n
68
CYS
268
F
GLY
269
n
69
GLY
269
F
ARG
270
n
70
ARG
270
F
LYS
271
n
71
LYS
271
F
PHE
272
n
72
PHE
272
F
ALA
273
n
73
ALA
273
F
THR
274
n
74
THR
274
F
LEU
275
n
75
LEU
275
F
HIS
276
n
76
HIS
276
F
THR
277
n
77
THR
277
F
ARG
278
n
78
ARG
278
F
ASP
279
n
79
ASP
279
F
ARG
280
n
80
ARG
280
F
HIS
281
n
81
HIS
281
F
THR
282
n
82
THR
282
F
LYS
283
n
83
LYS
283
F
ILE
284
n
84
ILE
284
F
HIS
285
n
85
HIS
285
F
LEU
286
n
86
LEU
286
F
ARG
287
n
87
ARG
287
F
GLN
288
n
88
GLN
288
F
n
89
289
F
n
90
290
F
author_defined_assembly
3
trimeric
author_defined_assembly
3
trimeric
C
CYS
107
E
SG
CYS
7
1_555
C
ZN
301
G
ZN
ZN
1_555
C
CYS
112
E
SG
CYS
12
1_555
110.9
C
CYS
107
E
SG
CYS
7
1_555
C
ZN
301
G
ZN
ZN
1_555
C
HIS
125
E
NE2
HIS
25
1_555
109.9
C
CYS
112
E
SG
CYS
12
1_555
C
ZN
301
G
ZN
ZN
1_555
C
HIS
125
E
NE2
HIS
25
1_555
94.4
C
CYS
107
E
SG
CYS
7
1_555
C
ZN
301
G
ZN
ZN
1_555
C
HIS
129
E
NE2
HIS
29
1_555
109.6
C
CYS
112
E
SG
CYS
12
1_555
C
ZN
301
G
ZN
ZN
1_555
C
HIS
129
E
NE2
HIS
29
1_555
114.0
C
HIS
125
E
NE2
HIS
25
1_555
C
ZN
301
G
ZN
ZN
1_555
C
HIS
129
E
NE2
HIS
29
1_555
117.3
C
CYS
137
E
SG
CYS
37
1_555
C
ZN
302
H
ZN
ZN
1_555
C
CYS
140
E
SG
CYS
40
1_555
123.5
C
CYS
137
E
SG
CYS
37
1_555
C
ZN
302
H
ZN
ZN
1_555
C
HIS
153
E
NE2
HIS
53
1_555
114.4
C
CYS
140
E
SG
CYS
40
1_555
C
ZN
302
H
ZN
ZN
1_555
C
HIS
153
E
NE2
HIS
53
1_555
95.9
C
CYS
137
E
SG
CYS
37
1_555
C
ZN
302
H
ZN
ZN
1_555
C
HIS
157
E
NE2
HIS
57
1_555
110.3
C
CYS
140
E
SG
CYS
40
1_555
C
ZN
302
H
ZN
ZN
1_555
C
HIS
157
E
NE2
HIS
57
1_555
107.7
C
HIS
153
E
NE2
HIS
53
1_555
C
ZN
302
H
ZN
ZN
1_555
C
HIS
157
E
NE2
HIS
57
1_555
102.3
C
CYS
165
E
SG
CYS
65
1_555
C
ZN
303
I
ZN
ZN
1_555
C
CYS
168
E
SG
CYS
68
1_555
113.6
C
CYS
165
E
SG
CYS
65
1_555
C
ZN
303
I
ZN
ZN
1_555
C
HIS
181
E
NE2
HIS
81
1_555
105.9
C
CYS
168
E
SG
CYS
68
1_555
C
ZN
303
I
ZN
ZN
1_555
C
HIS
181
E
NE2
HIS
81
1_555
98.2
C
CYS
165
E
SG
CYS
65
1_555
C
ZN
303
I
ZN
ZN
1_555
C
HIS
185
E
NE2
HIS
85
1_555
114.3
C
CYS
168
E
SG
CYS
68
1_555
C
ZN
303
I
ZN
ZN
1_555
C
HIS
185
E
NE2
HIS
85
1_555
117.8
C
HIS
181
E
NE2
HIS
81
1_555
C
ZN
303
I
ZN
ZN
1_555
C
HIS
185
E
NE2
HIS
85
1_555
104.3
F
CYS
207
F
SG
CYS
7
1_555
F
ZN
304
J
ZN
ZN
1_555
F
CYS
212
F
SG
CYS
12
1_555
113.5
F
CYS
207
F
SG
CYS
7
1_555
F
ZN
304
J
ZN
ZN
1_555
F
HIS
225
F
NE2
HIS
25
1_555
107.2
F
CYS
212
F
SG
CYS
12
1_555
F
ZN
304
J
ZN
ZN
1_555
F
HIS
225
F
NE2
HIS
25
1_555
101.7
F
CYS
207
F
SG
CYS
7
1_555
F
ZN
304
J
ZN
ZN
1_555
F
HIS
229
F
NE2
HIS
29
1_555
95.5
F
CYS
212
F
SG
CYS
12
1_555
F
ZN
304
J
ZN
ZN
1_555
F
HIS
229
F
NE2
HIS
29
1_555
125.4
F
HIS
225
F
NE2
HIS
25
1_555
F
ZN
304
J
ZN
ZN
1_555
F
HIS
229
F
NE2
HIS
29
1_555
112.8
F
CYS
237
F
SG
CYS
37
1_555
F
ZN
305
K
ZN
ZN
1_555
F
CYS
240
F
SG
CYS
40
1_555
116.3
F
CYS
237
F
SG
CYS
37
1_555
F
ZN
305
K
ZN
ZN
1_555
F
HIS
253
F
NE2
HIS
53
1_555
107.2
F
CYS
240
F
SG
CYS
40
1_555
F
ZN
305
K
ZN
ZN
1_555
F
HIS
253
F
NE2
HIS
53
1_555
103.4
F
CYS
237
F
SG
CYS
37
1_555
F
ZN
305
K
ZN
ZN
1_555
F
HIS
257
F
NE2
HIS
57
1_555
104.0
F
CYS
240
F
SG
CYS
40
1_555
F
ZN
305
K
ZN
ZN
1_555
F
HIS
257
F
NE2
HIS
57
1_555
119.2
F
HIS
253
F
NE2
HIS
53
1_555
F
ZN
305
K
ZN
ZN
1_555
F
HIS
257
F
NE2
HIS
57
1_555
105.7
F
CYS
265
F
SG
CYS
65
1_555
F
ZN
306
L
ZN
ZN
1_555
F
CYS
268
F
SG
CYS
68
1_555
114.6
F
CYS
265
F
SG
CYS
65
1_555
F
ZN
306
L
ZN
ZN
1_555
F
HIS
281
F
NE2
HIS
81
1_555
109.1
F
CYS
268
F
SG
CYS
68
1_555
F
ZN
306
L
ZN
ZN
1_555
F
HIS
281
F
NE2
HIS
81
1_555
106.9
F
CYS
265
F
SG
CYS
65
1_555
F
ZN
306
L
ZN
ZN
1_555
F
HIS
285
F
NE2
HIS
85
1_555
109.9
F
CYS
268
F
SG
CYS
68
1_555
F
ZN
306
L
ZN
ZN
1_555
F
HIS
285
F
NE2
HIS
85
1_555
111.8
F
HIS
281
F
NE2
HIS
81
1_555
F
ZN
306
L
ZN
ZN
1_555
F
HIS
285
F
NE2
HIS
85
1_555
103.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
C
O
TYR
105
E
O
TYR
5
C
N
PHE
116
E
N
PHE
16
C
O
PHE
135
E
O
PHE
35
C
N
PHE
144
E
N
PHE
44
C
O
PHE
163
E
O
PHE
63
C
N
PHE
172
E
N
PHE
72
F
O
TYR
205
F
O
TYR
5
F
N
PHE
216
F
N
PHE
16
F
O
PHE
235
F
O
PHE
35
F
N
PHE
244
F
N
PHE
44
F
O
PHE
263
F
O
PHE
63
F
N
PHE
272
F
N
PHE
72
1
F
HOH
1001
R
HOH
1
F
HOH
1304
R
HOH
1
F
HOH
1406
R
HOH
1
C
ASP
190
E
ASP
90
1
Y
1
F
LYS
289
F
LYS
89
1
Y
1
F
ASP
290
F
ASP
90
1
Y
1
C
CYS
112
-65.02
-72.24
1
C
ILE
139
-95.40
-61.03
1
F
GLU
202
61.75
77.18
1
F
ARG
203
-117.00
71.37
PARHCSDX.PRO
TOPHCSDX.PRO
DNA-RNA.PARAM
DNA-RNA.TOP
PARAM19.SOL
TOPH19.SOL
38.6
0.00
0.00
0.00
0.00
0.00
0.00
0.2620000
0.005
0.2250000
2.20
20.00
3081
32465
31492
9.8
94.6
RANDOM
10000000.00
0.00
1
RESTRAINED
THROUGHOUT
2.0
0
MOLECULAR REPLACEMENT
TATA structure of clone #6 solved by MIRAS
Xplor parameter set: param19.sol;parhcsdx.pro;dna-rna.param
0.37
0.33
5.00
0.42
0.39
2.20
20.00
224
2997
6
1300
1467
0.006
1.1
20.1
1.17
2.46
1.50
3.85
2.00
3.92
2.00
5.95
2.50
0.3970000
0.019
0.3620000
2.34
442
4110
6
9.7
82.2
31.0
2.2
20
1G2D
32875
358651
0
0
6.6000000
1
30.04
10.91
99.5
2.20
2.28
9.35
3182
44.8000000
9
95.5
phasing
MLPHARE
refinement
X-PLOR
3.851
data scaling
SCALEPACK
STRUCTURE OF A CYS2HIS2 ZINC FINGER/TATA BOX COMPLEX (CLONE #2)
1
N
N
2
N
N
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
5
N
N
C
GLN
118
E
GLN
18
HELX_P
C
GLY
131
E
GLY
31
1
1
14
C
GLN
146
E
GLN
46
HELX_P
C
GLY
159
E
GLY
59
1
2
14
C
THR
174
E
THR
74
HELX_P
C
LYS
183
E
LYS
83
1
3
10
C
ILE
184
E
ILE
84
HELX_P
C
ARG
187
E
ARG
87
5
4
4
F
GLN
218
F
GLN
18
HELX_P
F
GLY
231
F
GLY
31
1
5
14
F
GLN
246
F
GLN
46
HELX_P
F
GLY
259
F
GLY
59
1
6
14
F
THR
274
F
THR
74
HELX_P
F
LYS
283
F
LYS
83
1
7
10
F
ILE
284
F
ILE
84
HELX_P
F
LEU
286
F
LEU
86
5
8
3
metalc
2.310
C
CYS
107
E
SG
CYS
7
1_555
C
ZN
301
G
ZN
ZN
1_555
metalc
2.395
C
CYS
112
E
SG
CYS
12
1_555
C
ZN
301
G
ZN
ZN
1_555
metalc
2.134
C
HIS
125
E
NE2
HIS
25
1_555
C
ZN
301
G
ZN
ZN
1_555
metalc
2.018
C
HIS
129
E
NE2
HIS
29
1_555
C
ZN
301
G
ZN
ZN
1_555
metalc
2.219
C
CYS
137
E
SG
CYS
37
1_555
C
ZN
302
H
ZN
ZN
1_555
metalc
2.397
C
CYS
140
E
SG
CYS
40
1_555
C
ZN
302
H
ZN
ZN
1_555
metalc
2.138
C
HIS
153
E
NE2
HIS
53
1_555
C
ZN
302
H
ZN
ZN
1_555
metalc
2.205
C
HIS
157
E
NE2
HIS
57
1_555
C
ZN
302
H
ZN
ZN
1_555
metalc
2.459
C
CYS
165
E
SG
CYS
65
1_555
C
ZN
303
I
ZN
ZN
1_555
metalc
2.185
C
CYS
168
E
SG
CYS
68
1_555
C
ZN
303
I
ZN
ZN
1_555
metalc
2.216
C
HIS
181
E
NE2
HIS
81
1_555
C
ZN
303
I
ZN
ZN
1_555
metalc
2.044
C
HIS
185
E
NE2
HIS
85
1_555
C
ZN
303
I
ZN
ZN
1_555
metalc
2.332
F
CYS
207
F
SG
CYS
7
1_555
F
ZN
304
J
ZN
ZN
1_555
metalc
2.272
F
CYS
212
F
SG
CYS
12
1_555
F
ZN
304
J
ZN
ZN
1_555
metalc
2.134
F
HIS
225
F
NE2
HIS
25
1_555
F
ZN
304
J
ZN
ZN
1_555
metalc
2.066
F
HIS
229
F
NE2
HIS
29
1_555
F
ZN
304
J
ZN
ZN
1_555
metalc
2.368
F
CYS
237
F
SG
CYS
37
1_555
F
ZN
305
K
ZN
ZN
1_555
metalc
2.476
F
CYS
240
F
SG
CYS
40
1_555
F
ZN
305
K
ZN
ZN
1_555
metalc
2.080
F
HIS
253
F
NE2
HIS
53
1_555
F
ZN
305
K
ZN
ZN
1_555
metalc
2.078
F
HIS
257
F
NE2
HIS
57
1_555
F
ZN
305
K
ZN
ZN
1_555
metalc
2.304
F
CYS
265
F
SG
CYS
65
1_555
F
ZN
306
L
ZN
ZN
1_555
metalc
2.363
F
CYS
268
F
SG
CYS
68
1_555
F
ZN
306
L
ZN
ZN
1_555
metalc
2.160
F
HIS
281
F
NE2
HIS
81
1_555
F
ZN
306
L
ZN
ZN
1_555
metalc
2.075
F
HIS
285
F
NE2
HIS
85
1_555
F
ZN
306
L
ZN
ZN
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N1
DG
1
1_555
B
DC
32
B
N3
DC
15
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N2
DG
1
1_555
B
DC
32
B
O2
DC
15
1_555
hydrog
WATSON-CRICK
A
DG
2
A
O6
DG
1
1_555
B
DC
32
B
N4
DC
15
1_555
hydrog
WATSON-CRICK
A
DA
3
A
N1
DA
2
1_555
B
DT
31
B
N3
DT
14
1_555
hydrog
WATSON-CRICK
A
DA
3
A
N6
DA
2
1_555
B
DT
31
B
O4
DT
14
1_555
hydrog
WATSON-CRICK
A
DC
4
A
N3
DC
3
1_555
B
DG
30
B
N1
DG
13
1_555
hydrog
WATSON-CRICK
A
DC
4
A
N4
DC
3
1_555
B
DG
30
B
O6
DG
13
1_555
hydrog
WATSON-CRICK
A
DC
4
A
O2
DC
3
1_555
B
DG
30
B
N2
DG
13
1_555
hydrog
WATSON-CRICK
A
DG
5
A
N1
DG
4
1_555
B
DC
29
B
N3
DC
12
1_555
hydrog
WATSON-CRICK
A
DG
5
A
N2
DG
4
1_555
B
DC
29
B
O2
DC
12
1_555
hydrog
WATSON-CRICK
A
DG
5
A
O6
DG
4
1_555
B
DC
29
B
N4
DC
12
1_555
hydrog
WATSON-CRICK
A
DC
6
A
N3
DC
5
1_555
B
DG
28
B
N1
DG
11
1_555
hydrog
WATSON-CRICK
A
DC
6
A
N4
DC
5
1_555
B
DG
28
B
O6
DG
11
1_555
hydrog
WATSON-CRICK
A
DC
6
A
O2
DC
5
1_555
B
DG
28
B
N2
DG
11
1_555
hydrog
WATSON-CRICK
A
DT
7
A
N3
DT
6
1_555
B
DA
27
B
N1
DA
10
1_555
hydrog
WATSON-CRICK
A
DT
7
A
O4
DT
6
1_555
B
DA
27
B
N6
DA
10
1_555
hydrog
WATSON-CRICK
A
DA
8
A
N1
DA
7
1_555
B
DT
26
B
N3
DT
9
1_555
hydrog
WATSON-CRICK
A
DA
8
A
N6
DA
7
1_555
B
DT
26
B
O4
DT
9
1_555
hydrog
WATSON-CRICK
A
DT
9
A
N3
DT
8
1_555
B
DA
25
B
N1
DA
8
1_555
hydrog
WATSON-CRICK
A
DT
9
A
O4
DT
8
1_555
B
DA
25
B
N6
DA
8
1_555
hydrog
WATSON-CRICK
A
DA
10
A
N1
DA
9
1_555
B
DT
24
B
N3
DT
7
1_555
hydrog
WATSON-CRICK
A
DA
10
A
N6
DA
9
1_555
B
DT
24
B
O4
DT
7
1_555
hydrog
DA-DT PAIR
A
DA
11
A
N1
DA
10
1_555
B
DT
23
B
N3
DT
6
1_555
hydrog
WATSON-CRICK
A
DA
12
A
N1
DA
11
1_555
B
DT
22
B
N3
DT
5
1_555
hydrog
WATSON-CRICK
A
DA
12
A
N6
DA
11
1_555
B
DT
22
B
O4
DT
5
1_555
hydrog
WATSON-CRICK
A
DA
13
A
N1
DA
12
1_555
B
DT
21
B
N3
DT
4
1_555
hydrog
WATSON-CRICK
A
DA
13
A
N6
DA
12
1_555
B
DT
21
B
O4
DT
4
1_555
hydrog
WATSON-CRICK
A
DG
14
A
N1
DG
13
1_555
B
DC
20
B
N3
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
14
A
N2
DG
13
1_555
B
DC
20
B
O2
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
14
A
O6
DG
13
1_555
B
DC
20
B
N4
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
15
A
N1
DG
14
1_555
B
DC
19
B
N3
DC
2
1_555
hydrog
WATSON-CRICK
A
DG
15
A
N2
DG
14
1_555
B
DC
19
B
O2
DC
2
1_555
hydrog
WATSON-CRICK
A
DG
15
A
O6
DG
14
1_555
B
DC
19
B
N4
DC
2
1_555
hydrog
WATSON-CRICK
A
DA
16
A
N1
DA
15
1_555
B
DT
18
B
N3
DT
1
1_555
hydrog
WATSON-CRICK
A
DA
16
A
N6
DA
15
1_555
B
DT
18
B
O4
DT
1
1_555
hydrog
WATSON-CRICK
B
DC
33
B
N3
DC
16
1_555
D
DG
67
C
N1
DG
16
1_555
hydrog
WATSON-CRICK
B
DC
33
B
N4
DC
16
1_555
D
DG
67
C
O6
DG
16
1_555
hydrog
WATSON-CRICK
B
DC
33
B
O2
DC
16
1_555
D
DG
67
C
N2
DG
16
1_555
hydrog
WATSON-CRICK
D
DG
52
C
N1
DG
1
1_555
E
DC
82
D
N3
DC
15
1_555
hydrog
WATSON-CRICK
D
DG
52
C
N2
DG
1
1_555
E
DC
82
D
O2
DC
15
1_555
hydrog
WATSON-CRICK
D
DG
52
C
O6
DG
1
1_555
E
DC
82
D
N4
DC
15
1_555
hydrog
WATSON-CRICK
D
DA
53
C
N1
DA
2
1_555
E
DT
81
D
N3
DT
14
1_555
hydrog
WATSON-CRICK
D
DA
53
C
N6
DA
2
1_555
E
DT
81
D
O4
DT
14
1_555
hydrog
WATSON-CRICK
D
DC
54
C
N3
DC
3
1_555
E
DG
80
D
N1
DG
13
1_555
hydrog
WATSON-CRICK
D
DC
54
C
N4
DC
3
1_555
E
DG
80
D
O6
DG
13
1_555
hydrog
WATSON-CRICK
D
DC
54
C
O2
DC
3
1_555
E
DG
80
D
N2
DG
13
1_555
hydrog
WATSON-CRICK
D
DG
55
C
N1
DG
4
1_555
E
DC
79
D
N3
DC
12
1_555
hydrog
WATSON-CRICK
D
DG
55
C
N2
DG
4
1_555
E
DC
79
D
O2
DC
12
1_555
hydrog
WATSON-CRICK
D
DG
55
C
O6
DG
4
1_555
E
DC
79
D
N4
DC
12
1_555
hydrog
WATSON-CRICK
D
DC
56
C
N3
DC
5
1_555
E
DG
78
D
N1
DG
11
1_555
hydrog
WATSON-CRICK
D
DC
56
C
N4
DC
5
1_555
E
DG
78
D
O6
DG
11
1_555
hydrog
WATSON-CRICK
D
DC
56
C
O2
DC
5
1_555
E
DG
78
D
N2
DG
11
1_555
hydrog
WATSON-CRICK
D
DT
57
C
N3
DT
6
1_555
E
DA
77
D
N1
DA
10
1_555
hydrog
WATSON-CRICK
D
DT
57
C
O4
DT
6
1_555
E
DA
77
D
N6
DA
10
1_555
hydrog
WATSON-CRICK
D
DA
58
C
N1
DA
7
1_555
E
DT
76
D
N3
DT
9
1_555
hydrog
WATSON-CRICK
D
DA
58
C
N6
DA
7
1_555
E
DT
76
D
O4
DT
9
1_555
hydrog
WATSON-CRICK
D
DT
59
C
N3
DT
8
1_555
E
DA
75
D
N1
DA
8
1_555
hydrog
WATSON-CRICK
D
DT
59
C
O4
DT
8
1_555
E
DA
75
D
N6
DA
8
1_555
hydrog
WATSON-CRICK
D
DA
60
C
N1
DA
9
1_555
E
DT
74
D
N3
DT
7
1_555
hydrog
WATSON-CRICK
D
DA
60
C
N6
DA
9
1_555
E
DT
74
D
O4
DT
7
1_555
hydrog
WATSON-CRICK
D
DA
61
C
N1
DA
10
1_555
E
DT
73
D
N3
DT
6
1_555
hydrog
WATSON-CRICK
D
DA
61
C
N6
DA
10
1_555
E
DT
73
D
O4
DT
6
1_555
hydrog
WATSON-CRICK
D
DA
62
C
N1
DA
11
1_555
E
DT
72
D
N3
DT
5
1_555
hydrog
WATSON-CRICK
D
DA
62
C
N6
DA
11
1_555
E
DT
72
D
O4
DT
5
1_555
hydrog
WATSON-CRICK
D
DA
63
C
N1
DA
12
1_555
E
DT
71
D
N3
DT
4
1_555
hydrog
WATSON-CRICK
D
DA
63
C
N6
DA
12
1_555
E
DT
71
D
O4
DT
4
1_555
hydrog
WATSON-CRICK
D
DG
64
C
N1
DG
13
1_555
E
DC
70
D
N3
DC
3
1_555
hydrog
WATSON-CRICK
D
DG
64
C
N2
DG
13
1_555
E
DC
70
D
O2
DC
3
1_555
hydrog
WATSON-CRICK
D
DG
64
C
O6
DG
13
1_555
E
DC
70
D
N4
DC
3
1_555
hydrog
WATSON-CRICK
D
DG
65
C
N1
DG
14
1_555
E
DC
69
D
N3
DC
2
1_555
hydrog
WATSON-CRICK
D
DG
65
C
N2
DG
14
1_555
E
DC
69
D
O2
DC
2
1_555
hydrog
WATSON-CRICK
D
DG
65
C
O6
DG
14
1_555
E
DC
69
D
N4
DC
2
1_555
hydrog
WATSON-CRICK
D
DA
66
C
N1
DA
15
1_555
E
DT
68
D
N3
DT
1
1_555
hydrog
WATSON-CRICK
D
DA
66
C
N6
DA
15
1_555
E
DT
68
D
O4
DT
1
1_555
TRANSCRIPTION/DNA
phage display, zinc finger-DNA complex, TATA box, Cys2His2, TRANSCRIPTION-DNA COMPLEX
EGR1_MOUSE
UNP
3
333
P08046
1G2D
PDB
1
1G2D
1G2D
PDB
2
1G2D
333
421
1G2D
102
190
P08046
C
1
2
90
333
421
1G2D
202
290
P08046
F
1
2
90
2
17
1G2D
2
17
1G2D
A
2
1
16
18
33
1G2D
18
33
1G2D
B
3
1
16
52
67
1G2D
52
67
1G2D
D
2
1
16
68
83
1G2D
68
83
1G2D
E
3
1
16
2
2
2
2
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
C
TYR
105
E
TYR
5
C
ALA
106
E
ALA
6
C
ARG
115
E
ARG
15
C
PHE
116
E
PHE
16
C
PHE
135
E
PHE
35
C
GLN
136
E
GLN
36
C
ASN
143
E
ASN
43
C
PHE
144
E
PHE
44
C
PHE
163
E
PHE
63
C
ALA
164
E
ALA
64
C
LYS
171
E
LYS
71
C
PHE
172
E
PHE
72
F
TYR
205
F
TYR
5
F
ALA
206
F
ALA
6
F
ARG
215
F
ARG
15
F
PHE
216
F
PHE
16
F
PHE
235
F
PHE
35
F
GLN
236
F
GLN
36
F
ASN
243
F
ASN
43
F
PHE
244
F
PHE
44
F
PHE
263
F
PHE
63
F
ALA
264
F
ALA
64
F
LYS
271
F
LYS
71
F
PHE
272
F
PHE
72
BINDING SITE FOR RESIDUE ZN C 301
C
ZN
301
Software
4
BINDING SITE FOR RESIDUE ZN C 302
C
ZN
302
Software
4
BINDING SITE FOR RESIDUE ZN C 303
C
ZN
303
Software
4
BINDING SITE FOR RESIDUE ZN F 304
F
ZN
304
Software
4
BINDING SITE FOR RESIDUE ZN F 305
F
ZN
305
Software
4
BINDING SITE FOR RESIDUE ZN F 306
F
ZN
306
Software
4
C
CYS
107
E
CYS
7
4
1_555
C
CYS
112
E
CYS
12
4
1_555
C
HIS
125
E
HIS
25
4
1_555
C
HIS
129
E
HIS
29
4
1_555
C
CYS
137
E
CYS
37
4
1_555
C
CYS
140
E
CYS
40
4
1_555
C
HIS
153
E
HIS
53
4
1_555
C
HIS
157
E
HIS
57
4
1_555
C
CYS
165
E
CYS
65
4
1_555
C
CYS
168
E
CYS
68
4
1_555
C
HIS
181
E
HIS
81
4
1_555
C
HIS
185
E
HIS
85
4
1_555
F
CYS
207
F
CYS
7
4
1_555
F
CYS
212
F
CYS
12
4
1_555
F
HIS
225
F
HIS
25
4
1_555
F
HIS
229
F
HIS
29
4
1_555
F
CYS
237
F
CYS
37
4
1_555
F
CYS
240
F
CYS
40
4
1_555
F
HIS
253
F
HIS
53
4
1_555
F
HIS
257
F
HIS
57
4
1_555
F
CYS
265
F
CYS
65
4
1_555
F
CYS
268
F
CYS
68
4
1_555
F
HIS
281
F
HIS
81
4
1_555
F
HIS
285
F
HIS
85
4
1_555
172
P 64