0.020232
0.000000
0.000000
0.000000
0.010344
0.000000
0.000000
0.000000
0.008923
0.00000
0.00000
0.00000
Shi, W.
Tanaka, K.S.E.
Almo, S.C.
Schramm, V.L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90
90
90
49.426
96.670
112.075
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
S
N
305
N
O
N
306
N
O
N
307
N
O
N
308
N
O
N
309
N
N
N
310
S
C
N
311
N
C
N
312
N
O
N
313
R
C
N
314
N
O
N
315
N
C
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
N
N
327
S
C
N
328
N
C
N
329
N
O
N
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
Y
335
N
C
Y
336
N
C
N
337
N
O
N
338
N
O
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
N
N
351
S
C
N
352
N
C
N
353
N
O
N
354
N
C
N
355
N
C
N
356
N
C
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
doub
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
doub
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
doub
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
doub
N
326
N
sing
Y
327
N
doub
N
328
N
sing
Y
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
40
10800
10809
10.1021/bi010465h
11535055
Structural analysis of adenine phosphoribosyltransferase from Saccharomyces cerevisiae.
2001
10.2210/pdb1g2p/pdb
pdb_00001g2p
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
1999-07-11
ADSC QUANTUM 4
SINGLE WAVELENGTH
M
x-ray
1
0.98
1.0
X9B
NSLS
0.98
SYNCHROTRON
NSLS BEAMLINE X9B
20616.814
ADENINE PHOSPHORIBOSYLTRANSFERASE 1
2.4.2.7
1
man
polymer
96.063
SULFATE ION
2
syn
non-polymer
18.015
water
108
nat
water
no
no
MPIASYAQELKLALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALA
LGVGFVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVME
LDFLKGRSKLNAPVFTLLNAQKEALKK
MPIASYAQELKLALHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALA
LGVGFVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVME
LDFLKGRSKLNAPVFTLLNAQKEALKK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
baker's yeast
Saccharomyces
Escherichia
sample
4932
Saccharomyces cerevisiae
562
Escherichia coli
PLASMID
PQE
1
3.19
61.0
VAPOR DIFFUSION, HANGING DROP
7.5
lithium sulfate, Hepes, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_site
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2001-12-05
1
1
2008-04-27
1
2
2011-07-13
1
3
2023-08-09
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2000-10-20
REL
SO4
SULFATE ION
HOH
water
1QB8
pdb entry 1QB8
PDB
experimental model
SO4
301
2
SO4
SO4
301
A
SO4
302
2
SO4
SO4
302
A
HOH
501
3
HOH
HOH
501
A
HOH
502
3
HOH
HOH
502
A
HOH
503
3
HOH
HOH
503
A
HOH
504
3
HOH
HOH
504
A
HOH
505
3
HOH
HOH
505
A
HOH
506
3
HOH
HOH
506
A
HOH
507
3
HOH
HOH
507
A
HOH
508
3
HOH
HOH
508
A
HOH
509
3
HOH
HOH
509
A
HOH
510
3
HOH
HOH
510
A
HOH
511
3
HOH
HOH
511
A
HOH
512
3
HOH
HOH
512
A
HOH
513
3
HOH
HOH
513
A
HOH
514
3
HOH
HOH
514
A
HOH
515
3
HOH
HOH
515
A
HOH
516
3
HOH
HOH
516
A
HOH
517
3
HOH
HOH
517
A
HOH
518
3
HOH
HOH
518
A
HOH
519
3
HOH
HOH
519
A
HOH
520
3
HOH
HOH
520
A
HOH
521
3
HOH
HOH
521
A
HOH
522
3
HOH
HOH
522
A
HOH
523
3
HOH
HOH
523
A
HOH
524
3
HOH
HOH
524
A
HOH
525
3
HOH
HOH
525
A
HOH
526
3
HOH
HOH
526
A
HOH
527
3
HOH
HOH
527
A
HOH
528
3
HOH
HOH
528
A
HOH
529
3
HOH
HOH
529
A
HOH
530
3
HOH
HOH
530
A
HOH
531
3
HOH
HOH
531
A
HOH
532
3
HOH
HOH
532
A
HOH
533
3
HOH
HOH
533
A
HOH
534
3
HOH
HOH
534
A
HOH
535
3
HOH
HOH
535
A
HOH
536
3
HOH
HOH
536
A
HOH
537
3
HOH
HOH
537
A
HOH
538
3
HOH
HOH
538
A
HOH
539
3
HOH
HOH
539
A
HOH
540
3
HOH
HOH
540
A
HOH
541
3
HOH
HOH
541
A
HOH
542
3
HOH
HOH
542
A
HOH
543
3
HOH
HOH
543
A
HOH
544
3
HOH
HOH
544
A
HOH
545
3
HOH
HOH
545
A
HOH
546
3
HOH
HOH
546
A
HOH
547
3
HOH
HOH
547
A
HOH
548
3
HOH
HOH
548
A
HOH
549
3
HOH
HOH
549
A
HOH
550
3
HOH
HOH
550
A
HOH
551
3
HOH
HOH
551
A
HOH
552
3
HOH
HOH
552
A
HOH
553
3
HOH
HOH
553
A
HOH
554
3
HOH
HOH
554
A
HOH
555
3
HOH
HOH
555
A
HOH
556
3
HOH
HOH
556
A
HOH
557
3
HOH
HOH
557
A
HOH
558
3
HOH
HOH
558
A
HOH
559
3
HOH
HOH
559
A
HOH
560
3
HOH
HOH
560
A
HOH
561
3
HOH
HOH
561
A
HOH
562
3
HOH
HOH
562
A
HOH
563
3
HOH
HOH
563
A
HOH
564
3
HOH
HOH
564
A
HOH
565
3
HOH
HOH
565
A
HOH
566
3
HOH
HOH
566
A
HOH
567
3
HOH
HOH
567
A
HOH
568
3
HOH
HOH
568
A
HOH
569
3
HOH
HOH
569
A
HOH
570
3
HOH
HOH
570
A
HOH
571
3
HOH
HOH
571
A
HOH
572
3
HOH
HOH
572
A
HOH
573
3
HOH
HOH
573
A
HOH
574
3
HOH
HOH
574
A
HOH
575
3
HOH
HOH
575
A
HOH
576
3
HOH
HOH
576
A
HOH
577
3
HOH
HOH
577
A
HOH
578
3
HOH
HOH
578
A
HOH
579
3
HOH
HOH
579
A
HOH
580
3
HOH
HOH
580
A
HOH
581
3
HOH
HOH
581
A
HOH
582
3
HOH
HOH
582
A
HOH
583
3
HOH
HOH
583
A
HOH
584
3
HOH
HOH
584
A
HOH
585
3
HOH
HOH
585
A
HOH
586
3
HOH
HOH
586
A
HOH
587
3
HOH
HOH
587
A
HOH
588
3
HOH
HOH
588
A
HOH
589
3
HOH
HOH
589
A
HOH
590
3
HOH
HOH
590
A
HOH
591
3
HOH
HOH
591
A
HOH
592
3
HOH
HOH
592
A
HOH
593
3
HOH
HOH
593
A
HOH
594
3
HOH
HOH
594
A
HOH
595
3
HOH
HOH
595
A
HOH
596
3
HOH
HOH
596
A
HOH
597
3
HOH
HOH
597
A
HOH
598
3
HOH
HOH
598
A
HOH
599
3
HOH
HOH
599
A
HOH
600
3
HOH
HOH
600
A
HOH
601
3
HOH
HOH
601
A
HOH
602
3
HOH
HOH
602
A
HOH
603
3
HOH
HOH
603
A
HOH
604
3
HOH
HOH
604
A
HOH
605
3
HOH
HOH
605
A
HOH
606
3
HOH
HOH
606
A
HOH
607
3
HOH
HOH
607
A
HOH
608
3
HOH
HOH
608
A
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
SER
5
n
5
SER
5
A
TYR
6
n
6
TYR
6
A
ALA
7
n
7
ALA
7
A
GLN
8
n
8
GLN
8
A
GLU
9
n
9
GLU
9
A
LEU
10
n
10
LEU
10
A
LYS
11
n
11
LYS
11
A
LEU
12
n
12
LEU
12
A
ALA
13
n
13
ALA
13
A
LEU
14
n
14
LEU
14
A
HIS
15
n
15
HIS
15
A
GLN
16
n
16
GLN
16
A
TYR
17
n
17
TYR
17
A
PRO
18
n
18
PRO
18
A
ASN
19
n
19
ASN
19
A
PHE
20
n
20
PHE
20
A
PRO
21
n
21
PRO
21
A
SER
22
n
22
SER
22
A
ALA
23
n
23
GLU
23
A
GLY
24
n
24
GLY
24
A
ALA
25
n
25
ILE
25
A
LEU
26
n
26
LEU
26
A
PHE
27
n
27
PHE
27
A
GLU
28
n
28
GLU
28
A
ASP
29
n
29
ASP
29
A
PHE
30
n
30
PHE
30
A
LEU
31
n
31
LEU
31
A
PRO
32
n
32
PRO
32
A
ILE
33
n
33
ILE
33
A
PHE
34
n
34
PHE
34
A
ARG
35
n
35
ARG
35
A
ASN
36
n
36
ASN
36
A
PRO
37
n
37
PRO
37
A
GLY
38
n
38
GLY
38
A
LEU
39
n
39
LEU
39
A
PHE
40
n
40
PHE
40
A
GLN
41
n
41
GLN
41
A
LYS
42
n
42
LYS
42
A
LEU
43
n
43
LEU
43
A
ILE
44
n
44
ILE
44
A
ASP
45
n
45
ASP
45
A
ALA
46
n
46
ALA
46
A
PHE
47
n
47
PHE
47
A
LYS
48
n
48
LYS
48
A
LEU
49
n
49
LEU
49
A
HIS
50
n
50
HIS
50
A
LEU
51
n
51
LEU
51
A
GLU
52
n
52
GLU
52
A
GLU
53
n
53
GLU
53
A
ALA
54
n
54
ALA
54
A
PHE
55
n
55
PHE
55
A
PRO
56
n
56
PRO
56
A
GLU
57
n
57
GLU
57
A
VAL
58
n
58
VAL
58
A
LYS
59
n
59
LYS
59
A
ILE
60
n
60
ILE
60
A
ASP
61
n
61
ASP
61
A
TYR
62
n
62
TYR
62
A
ILE
63
n
63
ILE
63
A
VAL
64
n
64
VAL
64
A
GLY
65
n
65
GLY
65
A
LEU
66
n
66
LEU
66
A
GLU
67
n
67
GLU
67
A
SER
68
n
68
SER
68
A
ARG
69
n
69
ARG
69
A
GLY
70
n
70
GLY
70
A
PHE
71
n
71
PHE
71
A
LEU
72
n
72
LEU
72
A
PHE
73
n
73
PHE
73
A
GLY
74
n
74
GLY
74
A
PRO
75
n
75
PRO
75
A
THR
76
n
76
THR
76
A
LEU
77
n
77
LEU
77
A
ALA
78
n
78
ALA
78
A
LEU
79
n
79
LEU
79
A
ALA
80
n
80
ALA
80
A
LEU
81
n
81
LEU
81
A
GLY
82
n
82
GLY
82
A
VAL
83
n
83
VAL
83
A
GLY
84
n
84
GLY
84
A
PHE
85
n
85
PHE
85
A
VAL
86
n
86
VAL
86
A
PRO
87
n
87
PRO
87
A
VAL
88
n
88
VAL
88
A
ARG
89
n
89
ARG
89
A
LYS
90
n
90
LYS
90
A
ALA
91
n
91
ALA
91
A
GLY
92
n
92
GLY
92
A
LYS
93
n
93
LYS
93
A
LEU
94
n
94
LEU
94
A
PRO
95
n
95
PRO
95
A
GLY
96
n
96
GLY
96
A
GLU
97
n
97
GLU
97
A
CYS
98
n
98
CYS
98
A
PHE
99
n
99
PHE
99
A
LYS
100
n
100
LYS
100
A
ALA
101
n
101
ALA
101
A
THR
102
n
102
THR
102
A
TYR
103
n
103
TYR
103
A
GLU
104
n
104
GLU
104
A
n
105
105
A
n
106
106
A
n
107
107
A
n
108
108
A
SER
109
n
109
SER
109
A
ASP
110
n
110
ASP
110
A
LEU
111
n
111
LEU
111
A
PHE
112
n
112
PHE
112
A
GLU
113
n
113
GLU
113
A
ILE
114
n
114
ILE
114
A
GLN
115
n
115
GLN
115
A
LYS
116
n
116
LYS
116
A
ASN
117
n
117
ASN
117
A
ALA
118
n
118
ALA
118
A
ILE
119
n
119
ILE
119
A
PRO
120
n
120
PRO
120
A
ALA
121
n
121
ALA
121
A
GLY
122
n
122
GLY
122
A
SER
123
n
123
SER
123
A
ASN
124
n
124
ASN
124
A
VAL
125
n
125
VAL
125
A
ILE
126
n
126
ILE
126
A
ILE
127
n
127
ILE
127
A
VAL
128
n
128
VAL
128
A
ASP
129
n
129
ASP
129
A
ASP
130
n
130
ASP
130
A
ILE
131
n
131
ILE
131
A
ILE
132
n
132
ILE
132
A
ALA
133
n
133
ALA
133
A
THR
134
n
134
THR
134
A
GLY
135
n
135
GLY
135
A
GLY
136
n
136
GLY
136
A
SER
137
n
137
SER
137
A
ALA
138
n
138
ALA
138
A
ALA
139
n
139
ALA
139
A
ALA
140
n
140
ALA
140
A
ALA
141
n
141
ALA
141
A
GLY
142
n
142
GLY
142
A
GLU
143
n
143
GLU
143
A
LEU
144
n
144
LEU
144
A
VAL
145
n
145
VAL
145
A
GLU
146
n
146
GLU
146
A
GLN
147
n
147
GLN
147
A
LEU
148
n
148
LEU
148
A
GLU
149
n
149
GLU
149
A
ALA
150
n
150
ALA
150
A
ASN
151
n
151
ASN
151
A
LEU
152
n
152
LEU
152
A
LEU
153
n
153
LEU
153
A
GLU
154
n
154
GLU
154
A
TYR
155
n
155
TYR
155
A
ASN
156
n
156
ASN
156
A
PHE
157
n
157
PHE
157
A
VAL
158
n
158
VAL
158
A
MET
159
n
159
MET
159
A
GLU
160
n
160
GLU
160
A
LEU
161
n
161
LEU
161
A
ASP
162
n
162
ASP
162
A
PHE
163
n
163
PHE
163
A
LEU
164
n
164
LEU
164
A
LYS
165
n
165
LYS
165
A
GLY
166
n
166
GLY
166
A
ARG
167
n
167
ARG
167
A
SER
168
n
168
SER
168
A
LYS
169
n
169
LYS
169
A
LEU
170
n
170
LEU
170
A
ASN
171
n
171
ASN
171
A
ALA
172
n
172
ALA
172
A
PRO
173
n
173
PRO
173
A
VAL
174
n
174
VAL
174
A
PHE
175
n
175
PHE
175
A
THR
176
n
176
THR
176
A
LEU
177
n
177
LEU
177
A
LEU
178
n
178
LEU
178
A
n
179
179
A
n
180
180
A
n
181
181
A
n
182
182
A
n
183
183
A
n
184
184
A
n
185
185
A
n
186
186
A
n
187
187
A
author_and_software_defined_assembly
PISA,PQS
2
dimeric
4020
-83
14100
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
6_755
-x+2,-y+1/2,z
crystal symmetry operation
98.8520000000
48.3350000000
0.0000000000
A
O
TYR
17
A
O
TYR
17
A
N
PHE
27
A
N
PHE
27
A
N
TYR
103
A
N
TYR
103
A
O
ASP
110
A
O
ASP
110
A
N
GLU
113
A
N
GLU
113
A
O
ARG
89
A
O
ARG
89
A
O
GLY
84
A
O
GLY
84
A
N
ILE
63
A
N
ILE
63
A
N
TYR
62
A
N
TYR
62
A
O
ASN
124
A
O
ASN
124
A
N
VAL
125
A
N
VAL
125
A
O
ASN
151
A
O
ASN
151
A
N
PHE
157
A
N
PHE
157
A
O
PHE
175
A
O
PHE
175
1
A
CG
GLU
23
A
CG
GLU
23
1
Y
1
A
CD
GLU
23
A
CD
GLU
23
1
Y
1
A
OE1
GLU
23
A
OE1
GLU
23
1
Y
1
A
OE2
GLU
23
A
OE2
GLU
23
1
Y
1
A
CG1
ILE
25
A
CG1
ILE
25
1
Y
1
A
CG2
ILE
25
A
CG2
ILE
25
1
Y
1
A
CD1
ILE
25
A
CD1
ILE
25
1
Y
1
A
MET
1
A
MET
1
1
Y
1
A
PRO
2
A
PRO
2
1
Y
1
A
ILE
3
A
ILE
3
1
Y
1
A
ALA
4
A
ALA
4
1
Y
1
A
LYS
105
A
LYS
105
1
Y
1
A
GLU
106
A
GLU
106
1
Y
1
A
TYR
107
A
TYR
107
1
Y
1
A
GLY
108
A
GLY
108
1
Y
1
A
ASN
179
A
ASN
179
1
Y
1
A
ALA
180
A
ALA
180
1
Y
1
A
GLN
181
A
GLN
181
1
Y
1
A
LYS
182
A
LYS
182
1
Y
1
A
GLU
183
A
GLU
183
1
Y
1
A
ALA
184
A
ALA
184
1
Y
1
A
LEU
185
A
LEU
185
1
Y
1
A
LYS
186
A
LYS
186
1
Y
1
A
LYS
187
A
LYS
187
1
Y
1
A
A
NE2
NE2
GLN
GLN
16
16
1.98
1_555
6_655
1
A
A
O
O
HOH
HOH
515
515
2.18
1_555
6_755
1
A
PHE
20
-71.07
-71.08
1
A
ALA
133
-111.39
-95.03
28.6
-1.27
0.00
0.00
-4.41
0.00
5.68
0.2300000
0.005
0.2080000
0.2100000
1.75
20.0
2498
26354
25435
9.8
92.4
random
1
restrained
THROUGHOUT
2.0
1.4
MOLECULAR REPLACEMENT
pdb entry 1QB8
Engh & Huber
Flat model
49.4464
0.370397
0.23
0.21
5.00
0.32
0.26
1.75
20.0
108
1435
10
0
1317
0.008
1.4
24.6
0.96
1.77
1.50
2.61
2.00
2.94
2.00
4.17
2.50
0.3290000
0.018
0.3000000
1.86
349
3211
3211
6
9.8
79
15.9
1.75
20.0
1G2P
26348
26348
0.0
0.0
0.0410000
1
29.6
3.9
95.5
1.75
1.78
3.8
1134
0.2400000
1
1.9
82.8
phasing
AMoRE
refinement
CNS
0.9
data reduction
DENZO
data scaling
SCALEPACK
CRYSTAL STRUCTURE OF ADENINE PHOSPHORIBOSYLTRANSFERASE
1
N
N
2
N
N
2
N
N
3
N
N
The second part of the biological assemble is generated by the two fold screw axis, -x, -y+1/2, z
A
SER
5
A
SER
5
HELX_P
A
LEU
14
A
LEU
14
1
1
10
A
PHE
30
A
PHE
30
HELX_P
A
ASN
36
A
ASN
36
1
2
7
A
ASN
36
A
ASN
36
HELX_P
A
PHE
55
A
PHE
55
1
3
20
A
ARG
69
A
ARG
69
HELX_P
A
GLY
82
A
GLY
82
1
4
14
A
GLY
135
A
GLY
135
HELX_P
A
LEU
148
A
LEU
148
1
5
14
A
ASP
162
A
ASP
162
HELX_P
A
LEU
170
A
LEU
170
5
6
9
TRANSFERASE
dimer, catalytic loop, TRANSFERASE
A
GLU
67
A
GLU
67
1
A
SER
68
A
SER
68
-0.09
APT1_YEAST
UNP
1
1
P49435
MSIASYAQELKLALHQYPNFPSEGILFEDFLPIFRNFGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALA
LGVGFVPVRKAGKLPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVME
LDFLKGRSKLNAPVFTLLNAQKEALKK
1
187
1G2P
1
187
P49435
A
1
1
187
1
PHE
SEE REMARK 999
PRO
37
1G2P
A
P49435
UNP
37
37
2
7
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
A
HIS
15
A
HIS
15
A
TYR
17
A
TYR
17
A
PHE
27
A
PHE
27
A
ASP
29
A
ASP
29
A
CYS
98
A
CYS
98
A
TYR
103
A
TYR
103
A
ASP
110
A
ASP
110
A
GLN
115
A
GLN
115
A
GLY
84
A
GLY
84
A
LYS
90
A
LYS
90
A
TYR
62
A
TYR
62
A
LEU
66
A
LEU
66
A
ASN
124
A
ASN
124
A
ILE
132
A
ILE
132
A
ASN
151
A
ASN
151
A
GLU
160
A
GLU
160
A
VAL
174
A
VAL
174
A
THR
176
A
THR
176
BINDING SITE FOR RESIDUE SO4 A 301
A
SO4
301
Software
7
BINDING SITE FOR RESIDUE SO4 A 302
A
SO4
302
Software
7
A
ALA
133
A
ALA
133
7
1_555
A
THR
134
A
THR
134
7
1_555
A
GLY
135
A
GLY
135
7
1_555
A
GLY
136
A
GLY
136
7
1_555
A
SER
137
A
SER
137
7
1_555
A
HOH
516
D
HOH
7
1_555
A
HOH
540
D
HOH
7
1_555
A
GLU
67
A
GLU
67
7
1_555
A
SER
68
A
SER
68
7
1_555
A
ARG
69
A
ARG
69
7
1_555
A
ARG
89
A
ARG
89
7
6_755
A
LYS
90
A
LYS
90
7
1_555
A
LYS
93
A
LYS
93
7
6_755
A
HOH
533
D
HOH
7
1_555
24
I 21 21 21