0.031980
0.000000
0.002012
0.000000
0.020886
0.000000
0.000000
0.000000
0.024759
0.00000
0.00000
0.00000
Rose, R.B.
Endrizzi, J.A.
Cronk, J.D.
Holton, J.
Alber, T.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
93.60
90.00
31.270
47.880
40.470
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
O
N
22
N
N
N
23
N
O
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
N
N
35
S
C
N
36
N
C
N
37
N
O
N
38
N
C
N
39
N
C
N
40
N
C
N
41
N
O
N
42
N
O
N
43
N
O
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
N
N
54
N
C
N
55
N
C
N
56
N
O
N
57
N
O
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
O
N
64
N
H
N
65
N
H
N
66
N
N
N
67
S
C
N
68
N
C
N
69
N
O
N
70
S
C
N
71
N
C
N
72
N
C
N
73
N
C
N
74
N
O
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
C
N
96
N
O
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
N
N
111
S
C
N
112
N
C
N
113
N
O
N
114
N
C
N
115
N
C
N
116
N
C
N
117
N
C
N
118
N
N
N
119
N
O
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
N
N
136
S
C
N
137
N
C
N
138
N
O
N
139
N
C
N
140
N
C
N
141
N
S
N
142
N
C
N
143
N
O
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
N
N
156
S
C
N
157
N
C
N
158
N
O
N
159
N
O
N
160
N
C
N
161
N
C
N
162
N
SE
N
163
N
C
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
N
N
176
S
C
N
177
N
C
N
178
N
O
N
179
N
C
N
180
N
O
N
181
N
O
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
N
N
190
S
C
N
191
N
C
N
192
N
O
N
193
R
C
N
194
N
O
N
195
N
C
N
196
N
O
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
O
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
doub
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
doub
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
doub
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
doub
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
doub
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
doub
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
doub
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
39
15062
15070
10.1021/bi001996t
11106484
High-resolution structure of the HNF-1alpha dimerization domain.
2000
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
7
744
748
10.1038/78966
Structural basis of dimerization, coactivator recognition and MODY3 mutations in HNF-1alpha
2000
10.2210/pdb1g2y/pdb
pdb_00001g2y
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
200.0
1
Double crystal
CCD
1999-10-28
ADSC QUANTUM 4
double crystal
MAD
M
x-ray
1
0.95372
1.0
0.97957
1.0
0.9798
1.0
1.07812
1.0
5.0.2
ALS
0.95372, 0.97957, 0.9798, 1.07812
SYNCHROTRON
ALS BEAMLINE 5.0.2
3451.884
HEPATOCYTE NUCLEAR FACTOR 1-ALPHA
DIMERIZATION DOMAIN, RESIDUES 1-32
L12(MSE)
4
syn
polymer
18.015
water
176
nat
water
HNF-1A, LIVER SPECIFIC TRANSCRIPTION FACTOR LF-B1
no
yes
MVSKLSQLQTE(MSE)LAALLESGLSKEALIQALGE
MVSKLSQLQTEMLAALLESGLSKEALIQALGE
A,B,C,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
1
2.19
43.83
VAPOR DIFFUSION, HANGING DROP
8.5
PEG 4000, Tris-HCl, lithium sulphate, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 277.0K
277.0
database_2
struct_conn
struct_ref_seq_dif
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Data collection
Refinement description
1
0
2001-01-17
1
1
2008-04-27
1
2
2011-07-13
1
3
2021-11-03
1
4
2024-04-03
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
CRYSTAL STRUCTURE OF A COMPLEX BETWEEN THE DIMERIZATION DOMAIN OF HNF-1 ALPHA AND THE COACTIVATOR DCOH
dimerization domain of HNF-1alpha with a Leu 13 selenomethionine substitution
WILD-TYPE HNF-1ALPHA DIMERIZATION DOMAIN
RCSB
Y
RCSB
2000-10-23
REL
REL
HOH
water
This peptide was chemically synthesized. The sequence of this peptide naturally occurs in mouse (Mus musculus), with a point mutation at position 12.
sample
wARP model
Other
experimental model
WAT
1
2
HOH
HOH
33
A
WAT
4
2
HOH
HOH
34
A
WAT
8
2
HOH
HOH
35
A
WAT
16
2
HOH
HOH
36
A
WAT
17
2
HOH
HOH
37
A
WAT
61
2
HOH
HOH
38
A
WAT
70
2
HOH
HOH
39
A
WAT
71
2
HOH
HOH
40
A
WAT
81
2
HOH
HOH
41
A
WAT
95
2
HOH
HOH
42
A
WAT
96
2
HOH
HOH
43
A
WAT
97
2
HOH
HOH
44
A
WAT
98
2
HOH
HOH
45
A
WAT
99
2
HOH
HOH
46
A
WAT
100
2
HOH
HOH
47
A
WAT
101
2
HOH
HOH
48
A
WAT
102
2
HOH
HOH
49
A
WAT
103
2
HOH
HOH
50
A
WAT
105
2
HOH
HOH
51
A
WAT
106
2
HOH
HOH
52
A
WAT
107
2
HOH
HOH
53
A
WAT
108
2
HOH
HOH
54
A
WAT
109
2
HOH
HOH
55
A
WAT
112
2
HOH
HOH
56
A
WAT
113
2
HOH
HOH
57
A
WAT
114
2
HOH
HOH
58
A
WAT
115
2
HOH
HOH
59
A
WAT
116
2
HOH
HOH
60
A
WAT
117
2
HOH
HOH
61
A
WAT
118
2
HOH
HOH
62
A
WAT
119
2
HOH
HOH
63
A
WAT
120
2
HOH
HOH
64
A
WAT
129
2
HOH
HOH
65
A
WAT
133
2
HOH
HOH
66
A
WAT
156
2
HOH
HOH
67
A
WAT
171
2
HOH
HOH
68
A
WAT
176
2
HOH
HOH
69
A
WAT
178
2
HOH
HOH
70
A
WAT
179
2
HOH
HOH
71
A
WAT
180
2
HOH
HOH
72
A
WAT
181
2
HOH
HOH
73
A
WAT
182
2
HOH
HOH
74
A
WAT
184
2
HOH
HOH
75
A
WAT
185
2
HOH
HOH
76
A
WAT
186
2
HOH
HOH
77
A
WAT
187
2
HOH
HOH
78
A
WAT
188
2
HOH
HOH
79
A
WAT
191
2
HOH
HOH
80
A
WAT
201
2
HOH
HOH
81
A
WAT
207
2
HOH
HOH
82
A
WAT
5
2
HOH
HOH
33
B
WAT
6
2
HOH
HOH
34
B
WAT
7
2
HOH
HOH
35
B
WAT
9
2
HOH
HOH
36
B
WAT
10
2
HOH
HOH
37
B
WAT
11
2
HOH
HOH
38
B
WAT
12
2
HOH
HOH
39
B
WAT
13
2
HOH
HOH
40
B
WAT
14
2
HOH
HOH
41
B
WAT
19
2
HOH
HOH
42
B
WAT
20
2
HOH
HOH
43
B
WAT
21
2
HOH
HOH
44
B
WAT
22
2
HOH
HOH
45
B
WAT
83
2
HOH
HOH
46
B
WAT
85
2
HOH
HOH
47
B
WAT
86
2
HOH
HOH
48
B
WAT
92
2
HOH
HOH
49
B
WAT
93
2
HOH
HOH
50
B
WAT
122
2
HOH
HOH
51
B
WAT
123
2
HOH
HOH
52
B
WAT
124
2
HOH
HOH
53
B
WAT
125
2
HOH
HOH
54
B
WAT
127
2
HOH
HOH
55
B
WAT
128
2
HOH
HOH
56
B
WAT
130
2
HOH
HOH
57
B
WAT
131
2
HOH
HOH
58
B
WAT
132
2
HOH
HOH
59
B
WAT
135
2
HOH
HOH
60
B
WAT
153
2
HOH
HOH
61
B
WAT
160
2
HOH
HOH
62
B
WAT
161
2
HOH
HOH
63
B
WAT
162
2
HOH
HOH
64
B
WAT
163
2
HOH
HOH
65
B
WAT
165
2
HOH
HOH
66
B
WAT
166
2
HOH
HOH
67
B
WAT
168
2
HOH
HOH
68
B
WAT
169
2
HOH
HOH
69
B
WAT
173
2
HOH
HOH
70
B
WAT
174
2
HOH
HOH
71
B
WAT
177
2
HOH
HOH
72
B
WAT
206
2
HOH
HOH
73
B
WAT
223
2
HOH
HOH
74
B
WAT
224
2
HOH
HOH
75
B
WAT
2
2
HOH
HOH
33
C
WAT
3
2
HOH
HOH
34
C
WAT
24
2
HOH
HOH
35
C
WAT
25
2
HOH
HOH
36
C
WAT
26
2
HOH
HOH
37
C
WAT
27
2
HOH
HOH
38
C
WAT
28
2
HOH
HOH
39
C
WAT
34
2
HOH
HOH
40
C
WAT
35
2
HOH
HOH
41
C
WAT
37
2
HOH
HOH
42
C
WAT
38
2
HOH
HOH
43
C
WAT
39
2
HOH
HOH
44
C
WAT
42
2
HOH
HOH
45
C
WAT
44
2
HOH
HOH
46
C
WAT
50
2
HOH
HOH
47
C
WAT
53
2
HOH
HOH
48
C
WAT
57
2
HOH
HOH
49
C
WAT
58
2
HOH
HOH
50
C
WAT
59
2
HOH
HOH
51
C
WAT
60
2
HOH
HOH
52
C
WAT
62
2
HOH
HOH
53
C
WAT
63
2
HOH
HOH
54
C
WAT
64
2
HOH
HOH
55
C
WAT
65
2
HOH
HOH
56
C
WAT
104
2
HOH
HOH
57
C
WAT
111
2
HOH
HOH
58
C
WAT
121
2
HOH
HOH
59
C
WAT
137
2
HOH
HOH
60
C
WAT
138
2
HOH
HOH
61
C
WAT
140
2
HOH
HOH
62
C
WAT
144
2
HOH
HOH
63
C
WAT
145
2
HOH
HOH
64
C
WAT
157
2
HOH
HOH
65
C
WAT
192
2
HOH
HOH
66
C
WAT
198
2
HOH
HOH
67
C
WAT
199
2
HOH
HOH
68
C
WAT
200
2
HOH
HOH
69
C
WAT
213
2
HOH
HOH
70
C
WAT
214
2
HOH
HOH
71
C
WAT
220
2
HOH
HOH
72
C
WAT
226
2
HOH
HOH
73
C
WAT
31
2
HOH
HOH
33
D
WAT
45
2
HOH
HOH
34
D
WAT
66
2
HOH
HOH
35
D
WAT
67
2
HOH
HOH
36
D
WAT
68
2
HOH
HOH
37
D
WAT
69
2
HOH
HOH
38
D
WAT
72
2
HOH
HOH
39
D
WAT
73
2
HOH
HOH
40
D
WAT
77
2
HOH
HOH
41
D
WAT
78
2
HOH
HOH
42
D
WAT
79
2
HOH
HOH
43
D
WAT
80
2
HOH
HOH
44
D
WAT
82
2
HOH
HOH
45
D
WAT
84
2
HOH
HOH
46
D
WAT
88
2
HOH
HOH
47
D
WAT
89
2
HOH
HOH
48
D
WAT
90
2
HOH
HOH
49
D
WAT
91
2
HOH
HOH
50
D
WAT
94
2
HOH
HOH
51
D
WAT
134
2
HOH
HOH
52
D
WAT
136
2
HOH
HOH
53
D
WAT
141
2
HOH
HOH
54
D
WAT
142
2
HOH
HOH
55
D
WAT
143
2
HOH
HOH
56
D
WAT
146
2
HOH
HOH
57
D
WAT
147
2
HOH
HOH
58
D
WAT
148
2
HOH
HOH
59
D
WAT
149
2
HOH
HOH
60
D
WAT
150
2
HOH
HOH
61
D
WAT
151
2
HOH
HOH
62
D
WAT
152
2
HOH
HOH
63
D
WAT
154
2
HOH
HOH
64
D
WAT
155
2
HOH
HOH
65
D
WAT
159
2
HOH
HOH
66
D
WAT
158
2
HOH
HOH
67
D
WAT
167
2
HOH
HOH
68
D
WAT
183
2
HOH
HOH
69
D
WAT
210
2
HOH
HOH
70
D
WAT
211
2
HOH
HOH
71
D
WAT
228
2
HOH
HOH
72
D
WAT
229
2
HOH
HOH
73
D
WAT
230
2
HOH
HOH
74
D
ALA
1
n
1
MET
1
A
VAL
2
n
2
VAL
2
A
SER
3
n
3
SER
3
A
LYS
4
n
4
LYS
4
A
LEU
5
n
5
LEU
5
A
SER
6
n
6
SER
6
A
GLN
7
n
7
GLN
7
A
LEU
8
n
8
LEU
8
A
GLN
9
n
9
GLN
9
A
THR
10
n
10
THR
10
A
GLU
11
n
11
GLU
11
A
MSE
12
n
12
MSE
12
A
LEU
13
n
13
LEU
13
A
ALA
14
n
14
ALA
14
A
ALA
15
n
15
ALA
15
A
LEU
16
n
16
LEU
16
A
LEU
17
n
17
LEU
17
A
GLU
18
n
18
GLU
18
A
SER
19
n
19
SER
19
A
GLY
20
n
20
GLY
20
A
LEU
21
n
21
LEU
21
A
SER
22
n
22
SER
22
A
LYS
23
n
23
LYS
23
A
GLU
24
n
24
GLU
24
A
ALA
25
n
25
ALA
25
A
LEU
26
n
26
LEU
26
A
ILE
27
n
27
ILE
27
A
GLN
28
n
28
GLN
28
A
ALA
29
n
29
ALA
29
A
LEU
30
n
30
LEU
30
A
GLY
31
n
31
GLY
31
A
n
32
32
A
MET
1
n
1
MET
1
B
VAL
2
n
2
VAL
2
B
SER
3
n
3
SER
3
B
LYS
4
n
4
LYS
4
B
LEU
5
n
5
LEU
5
B
SER
6
n
6
SER
6
B
GLN
7
n
7
GLN
7
B
LEU
8
n
8
LEU
8
B
GLN
9
n
9
GLN
9
B
THR
10
n
10
THR
10
B
GLU
11
n
11
GLU
11
B
MSE
12
n
12
MSE
12
B
LEU
13
n
13
LEU
13
B
ALA
14
n
14
ALA
14
B
ALA
15
n
15
ALA
15
B
LEU
16
n
16
LEU
16
B
LEU
17
n
17
LEU
17
B
GLU
18
n
18
GLU
18
B
SER
19
n
19
SER
19
B
GLY
20
n
20
GLY
20
B
LEU
21
n
21
LEU
21
B
SER
22
n
22
SER
22
B
LYS
23
n
23
LYS
23
B
GLU
24
n
24
GLU
24
B
ALA
25
n
25
ALA
25
B
LEU
26
n
26
LEU
26
B
ILE
27
n
27
ILE
27
B
ALA
28
n
28
GLN
28
B
ALA
29
n
29
ALA
29
B
LEU
30
n
30
LEU
30
B
n
31
31
B
n
32
32
B
n
1
1
C
VAL
2
n
2
VAL
2
C
SER
3
n
3
SER
3
C
LYS
4
n
4
LYS
4
C
LEU
5
n
5
LEU
5
C
SER
6
n
6
SER
6
C
GLN
7
n
7
GLN
7
C
LEU
8
n
8
LEU
8
C
GLN
9
n
9
GLN
9
C
THR
10
n
10
THR
10
C
GLU
11
n
11
GLU
11
C
MSE
12
n
12
MSE
12
C
LEU
13
n
13
LEU
13
C
ALA
14
n
14
ALA
14
C
ALA
15
n
15
ALA
15
C
LEU
16
n
16
LEU
16
C
LEU
17
n
17
LEU
17
C
GLU
18
n
18
GLU
18
C
SER
19
n
19
SER
19
C
GLY
20
n
20
GLY
20
C
LEU
21
n
21
LEU
21
C
SER
22
n
22
SER
22
C
LYS
23
n
23
LYS
23
C
GLU
24
n
24
GLU
24
C
ALA
25
n
25
ALA
25
C
LEU
26
n
26
LEU
26
C
ILE
27
n
27
ILE
27
C
GLN
28
n
28
GLN
28
C
ALA
29
n
29
ALA
29
C
ALA
30
n
30
LEU
30
C
n
31
31
C
n
32
32
C
SER
1
n
1
MET
1
D
VAL
2
n
2
VAL
2
D
SER
3
n
3
SER
3
D
LYS
4
n
4
LYS
4
D
LEU
5
n
5
LEU
5
D
SER
6
n
6
SER
6
D
GLN
7
n
7
GLN
7
D
LEU
8
n
8
LEU
8
D
GLN
9
n
9
GLN
9
D
THR
10
n
10
THR
10
D
GLU
11
n
11
GLU
11
D
MSE
12
n
12
MSE
12
D
LEU
13
n
13
LEU
13
D
ALA
14
n
14
ALA
14
D
ALA
15
n
15
ALA
15
D
LEU
16
n
16
LEU
16
D
LEU
17
n
17
LEU
17
D
ALA
18
n
18
GLU
18
D
SER
19
n
19
SER
19
D
GLY
20
n
20
GLY
20
D
LEU
21
n
21
LEU
21
D
SER
22
n
22
SER
22
D
LYS
23
n
23
LYS
23
D
GLU
24
n
24
GLU
24
D
ALA
25
n
25
ALA
25
D
LEU
26
n
26
LEU
26
D
ILE
27
n
27
ILE
27
D
GLN
28
n
28
GLN
28
D
ALA
29
n
29
ALA
29
D
LEU
30
n
30
LEU
30
D
n
31
31
D
n
32
32
D
author_and_software_defined_assembly
PISA
2
dimeric
author_and_software_defined_assembly
PISA
2
dimeric
software_defined_assembly
PISA
4
tetrameric
software_defined_assembly
PISA
4
tetrameric
1290
-14
4540
1350
-14
4360
4760
-53
6790
3480
-39
8060
A
MSE
12
SELENOMETHIONINE
A
MSE
12
MET
B
MSE
12
SELENOMETHIONINE
B
MSE
12
MET
C
MSE
12
SELENOMETHIONINE
C
MSE
12
MET
D
MSE
12
SELENOMETHIONINE
D
MSE
12
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_556
x,y,z+1
crystal symmetry operation
-2.5411323254
0.0000000000
40.3901416995
1
A
CG
MET
1
A
CG
MET
1
1
Y
1
A
SD
MET
1
A
SD
MET
1
1
Y
1
A
CE
MET
1
A
CE
MET
1
1
Y
1
B
CG
GLU
24
B
CG
GLU
24
1
Y
1
B
CD
GLU
24
B
CD
GLU
24
1
Y
1
B
OE1
GLU
24
B
OE1
GLU
24
1
Y
1
B
OE2
GLU
24
B
OE2
GLU
24
1
Y
1
B
CG
GLN
28
B
CG
GLN
28
1
Y
1
B
CD
GLN
28
B
CD
GLN
28
1
Y
1
B
OE1
GLN
28
B
OE1
GLN
28
1
Y
1
B
NE2
GLN
28
B
NE2
GLN
28
1
Y
1
C
CG
LEU
30
C
CG
LEU
30
1
Y
1
C
CD1
LEU
30
C
CD1
LEU
30
1
Y
1
C
CD2
LEU
30
C
CD2
LEU
30
1
Y
1
D
CG
MET
1
D
CG
MET
1
1
Y
1
D
SD
MET
1
D
SD
MET
1
1
Y
1
D
CE
MET
1
D
CE
MET
1
1
Y
1
D
CG
GLU
18
D
CG
GLU
18
1
Y
1
D
CD
GLU
18
D
CD
GLU
18
1
Y
1
D
OE1
GLU
18
D
OE1
GLU
18
1
Y
1
D
OE2
GLU
18
D
OE2
GLU
18
1
Y
1
A
GLU
32
A
GLU
32
1
Y
1
B
GLY
31
B
GLY
31
1
Y
1
B
GLU
32
B
GLU
32
1
Y
1
C
MET
1
C
MET
1
1
Y
1
C
GLY
31
C
GLY
31
1
Y
1
C
GLU
32
C
GLU
32
1
Y
1
D
GLY
31
D
GLY
31
1
Y
1
D
GLU
32
D
GLU
32
1
Y
1
A
CA
VAL
2
PLANAR
1
B
B
O
O
HOH
HOH
50
54
2.10
1
A
A
CD
OE2
GLU
GLU
18
18
0.076
0.011
1.252
1.328
N
1
A
A
CD
OE2
GLU
GLU
24
24
0.070
0.011
1.252
1.322
N
1
B
B
CD
OE2
GLU
GLU
18
18
0.072
0.011
1.252
1.324
N
1
C
C
CD
OE2
GLU
GLU
18
18
0.083
0.011
1.252
1.335
N
1
A
B
O
O
HOH
HOH
36
54
2.02
1_555
2_645
1
C
D
N
O
VAL
HOH
2
36
2.18
1_555
2_555
1
D
VAL
2
59.12
109.91
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER.PARAM
WATER.TOP
16.0
-0.38
0.00
-0.43
0.57
0.00
-0.19
0.1980000
0.005
0.1950000
0.1950000
0.1950000
1.00
30.88
1657
55129
55129
3.0
85.5
RANDOM
499172.87
0.00
1
RESTRAINED
THROUGHOUT
0.0
0.0
MAD
wARP model
Engh & Huber
FLAT MODEL
98.59
0.372
0.14
0.14
5.00
0.14
0.15
1.00
30.88
176
1039
0
0
863
0.020
1.9
18.0
2.91
6.39
1.50
6.21
2.00
11.63
2.00
13.49
2.50
0.3750000
0.025
0.3980000
1.06
222
7390
6
2.9
71
7.4
1.0
30.9
1G2Y
55221
55221
2.0
2.0
0.0490000
1
16.8
2.8
86.4
0.1010000
1.0
1.05
9.2
55221
2.8
73.1
phasing
SOLVE
refinement
CNS
data reduction
MOSFLM
data scaling
CCP4
(SCALA)
HNF-1ALPHA DIMERIZATION DOMAIN, WITH SELENOMETHIONINE SUBSTITUED AT LEU 12
1
N
N
1
N
N
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
There are two HNF-1alpha dimers in the asymmetric unit: monomers A and C, and monomers B and D.
A
SER
3
A
SER
3
HELX_P
A
SER
19
A
SER
19
1
1
17
A
SER
22
A
SER
22
HELX_P
A
GLY
31
A
GLY
31
1
2
10
B
SER
3
B
SER
3
HELX_P
B
SER
19
B
SER
19
1
3
17
B
SER
22
B
SER
22
HELX_P
B
LEU
30
B
LEU
30
1
4
9
C
SER
3
C
SER
3
HELX_P
C
GLY
20
C
GLY
20
1
5
18
C
SER
22
C
SER
22
HELX_P
C
LEU
30
C
LEU
30
1
6
9
D
SER
3
D
SER
3
HELX_P
D
SER
19
D
SER
19
1
7
17
D
SER
22
D
SER
22
HELX_P
D
LEU
30
D
LEU
30
1
8
9
covale
1.327
both
A
GLU
11
A
C
GLU
11
1_555
A
MSE
12
A
N
MSE
12
1_555
covale
1.335
both
A
MSE
12
A
C
MSE
12
1_555
A
LEU
13
A
N
LEU
13
1_555
covale
1.329
both
B
GLU
11
B
C
GLU
11
1_555
B
MSE
12
B
N
MSE
12
1_555
covale
1.326
both
B
MSE
12
B
C
MSE
12
1_555
B
LEU
13
B
N
LEU
13
1_555
covale
1.362
both
C
GLU
11
C
C
GLU
11
1_555
C
MSE
12
C
N
MSE
12
1_555
covale
1.336
both
C
MSE
12
C
C
MSE
12
1_555
C
LEU
13
C
N
LEU
13
1_555
covale
1.354
both
D
GLU
11
D
C
GLU
11
1_555
D
MSE
12
D
N
MSE
12
1_555
covale
1.339
both
D
MSE
12
D
C
MSE
12
1_555
D
LEU
13
D
N
LEU
13
1_555
TRANSCRIPTION
dimerization domain, four-helix bundle, transcription factor, selenomethionine, TRANSCRIPTION
HNF1A_MOUSE
UNP
1
1
P22361
MVSKLSQLQTELLAALLESGLSKEALIQALGE
1
32
1G2Y
1
32
P22361
A
1
1
32
1
32
1G2Y
1
32
P22361
B
1
1
32
1
32
1G2Y
1
32
P22361
C
1
1
32
1
32
1G2Y
1
32
P22361
D
1
1
32
1
LEU
engineered mutation
MSE
12
1G2Y
A
P22361
UNP
12
12
2
LEU
engineered mutation
MSE
12
1G2Y
B
P22361
UNP
12
12
3
LEU
engineered mutation
MSE
12
1G2Y
C
P22361
UNP
12
12
4
LEU
engineered mutation
MSE
12
1G2Y
D
P22361
UNP
12
12
4
P 1 21 1