0.017094 0.000000 0.000000 0.000000 0.011507 0.000000 0.000000 0.000000 0.021322 0.00000 0.00000 0.00000 Lindberg, J. Unge, T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 58.500 86.900 46.900 C35 H40 N2 O9 S 664.765 2-[4-(HYDROXY-METHOXY-METHYL)-BENZYL]-7-(4-HYDROXYMETHYL-BENZYL)-1,1-DIOXO-3,6-BIS-PHENOXYMETHYL-1LAMBDA6-[1,2,7]THIADIAZEPANE-4,5-DIOL non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 N S N 3 N N N 4 R C N 5 S C N 6 S C N 7 R C N 8 N C Y 9 N C Y 10 N C Y 11 N C Y 12 N C Y 13 N C Y 14 N C N 15 N O N 16 N O Y 17 N C Y 18 N C Y 19 N C Y 20 N C Y 21 N C Y 22 N C N 23 N C Y 24 N C Y 25 N C Y 26 N C Y 27 N C Y 28 N C Y 29 N C N 30 N O N 31 N O N 32 N C N 33 N O Y 34 N C Y 35 N C Y 36 N C Y 37 N C Y 38 N C Y 39 N C N 40 N O N 41 N C N 42 S C N 43 N O N 44 N O N 45 N C N 46 N C N 47 N O N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N O N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N N N 102 S C N 103 N C N 104 N O N 105 N C N 106 N C N 107 N C N 108 N N N 109 N C N 110 N N N 111 N N N 112 N O N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N N N 129 S C N 130 N C N 131 N O N 132 N C N 133 N C N 134 N O N 135 N N N 136 N O N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N N N 146 S C N 147 N C N 148 N O N 149 N C N 150 N C N 151 N O N 152 N O N 153 N O N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N N N 162 R C N 163 N C N 164 N O N 165 N C N 166 N S N 167 N O N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N N N 176 S C N 177 N C N 178 N O N 179 N C N 180 N C N 181 N C N 182 N O N 183 N N N 184 N O N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N N N 196 S C N 197 N C N 198 N O N 199 N C N 200 N C N 201 N C N 202 N O N 203 N O N 204 N O N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N N N 215 N C N 216 N C N 217 N O N 218 N O N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N N N 225 S C N 226 N C N 227 N O N 228 N C Y 229 N C Y 230 N N Y 231 N C Y 232 N C Y 233 N N N 234 N O N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N O N 246 N H N 247 N H N 248 N N N 249 S C N 250 N C N 251 N O N 252 S C N 253 N C N 254 N C N 255 N C N 256 N O N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 S C N 272 N C N 273 N O N 274 N C N 275 N C N 276 N C N 277 N C N 278 N O N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N N N 293 S C N 294 N C N 295 N O N 296 N C N 297 N C N 298 N C N 299 N C N 300 N N N 301 N O N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N N N 318 S C N 319 N C N 320 N O N 321 N C N 322 N C N 323 N S N 324 N C N 325 N O N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N N N 338 S C N 339 N C N 340 N O N 341 N C Y 342 N C Y 343 N C Y 344 N C Y 345 N C Y 346 N C Y 347 N C N 348 N O N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N N N 361 S C N 362 N C N 363 N O N 364 N C N 365 N C N 366 N C N 367 N O N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N N N 378 S C N 379 N C N 380 N O N 381 N C N 382 N O N 383 N O N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N N N 392 S C N 393 N C N 394 N O N 395 R C N 396 N O N 397 N C N 398 N O N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N N N 409 S C N 410 N C N 411 N O N 412 N C Y 413 N C Y 414 N C Y 415 N C Y 416 N N Y 417 N C Y 418 N C Y 419 N C Y 420 N C Y 421 N C N 422 N O N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N N N 436 S C N 437 N C N 438 N O N 439 N C Y 440 N C Y 441 N C Y 442 N C Y 443 N C Y 444 N C Y 445 N C N 446 N O N 447 N O N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N N N 460 S C N 461 N C N 462 N O N 463 N C N 464 N C N 465 N C N 466 N O N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N doub N 6 N doub N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing Y 23 N doub Y 24 N sing Y 25 N sing N 26 N sing Y 27 N doub N 28 N sing Y 29 N sing N 30 N sing Y 31 N doub N 32 N sing N 33 N sing N 34 N sing N 35 N sing Y 36 N doub Y 37 N sing Y 38 N sing N 39 N sing Y 40 N doub N 41 N sing Y 42 N sing N 43 N sing Y 44 N doub N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing Y 50 N doub Y 51 N sing Y 52 N sing N 53 N sing Y 54 N doub N 55 N sing Y 56 N sing N 57 N sing Y 58 N doub N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing Y 67 N doub Y 68 N sing Y 69 N sing N 70 N sing Y 71 N doub N 72 N sing Y 73 N sing N 74 N sing Y 75 N doub N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N doub N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N doub N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N doub N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N doub N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N doub N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N doub N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N doub N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N doub N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N doub N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N doub N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N doub N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N doub N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N doub N 227 N sing N 228 N sing N 229 N sing N 230 N sing Y 231 N sing Y 232 N doub Y 233 N doub N 234 N sing Y 235 N sing N 236 N sing Y 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N doub N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N doub N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N doub N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N doub N 335 N sing N 336 N sing N 337 N sing N 338 N sing Y 339 N doub Y 340 N sing Y 341 N sing N 342 N sing Y 343 N doub N 344 N sing Y 345 N doub N 346 N sing Y 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N doub N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N doub N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N doub N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N doub N 404 N sing N 405 N sing N 406 N sing N 407 N sing Y 408 N doub Y 409 N sing Y 410 N sing N 411 N sing Y 412 N doub Y 413 N sing Y 414 N sing N 415 N sing Y 416 N sing Y 417 N doub N 418 N sing Y 419 N doub N 420 N sing Y 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N doub N 432 N sing N 433 N sing N 434 N sing N 435 N sing Y 436 N doub Y 437 N sing Y 438 N sing N 439 N sing Y 440 N doub N 441 N sing Y 442 N doub N 443 N sing Y 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N doub N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N sing US J.Med.Chem. JMCMAR 0151 0022-2623 44 155 169 10.1021/jm001024j 11170625 Synthesis and comparative molecular field analysis (CoMFA) of symmetric and nonsymmetric cyclic sulfamide HIV-1 protease inhibitors. 2001 10.2210/pdb1g35/pdb pdb_00001g35 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 278 1 mirrors AREA DETECTOR 1998-04-03 MARRESEARCH graphite SINGLE WAVELENGTH M x-ray 1 1.3750 1.0 I711 MAX II 1.3750 SYNCHROTRON MAX II BEAMLINE I711 10803.756 HIV-1 PROTEASE 3.4.23.16 2 man polymer 664.765 2-[4-(HYDROXY-METHOXY-METHYL)-BENZYL]-7-(4-HYDROXYMETHYL-BENZYL)-1,1-DIOXO-3,6-BIS-PHENOXYMETHYL-1LAMBDA6-[1,2,7]THIADIAZEPANE-4,5-DIOL 1 syn non-polymer 18.015 water 143 nat water no no PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Lentivirus BH7 Escherichia sample 11676 Human immunodeficiency virus 1 562 Escherichia coli 8 2.76 55.39 VAPOR DIFFUSION, HANGING DROP 5.5 50 mM MES, 0.4 M NaCl, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K 277 diffrn_source chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_site repository Initial release Version format compliance Version format compliance Data collection Data collection Database references Derived calculations Refinement description 1 0 2001-06-06 1 1 2008-04-27 1 2 2011-07-13 1 3 2018-03-07 1 4 2023-08-09 _diffrn_source.pdbx_synchrotron_site _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id 1ajv contains the same protein complexed with different inhibitor. 1ajx contains the same protein complexed with different inhibitor. RCSB Y RCSB 2000-10-23 REL REL AHF 2-[4-(HYDROXY-METHOXY-METHYL)-BENZYL]-7-(4-HYDROXYMETHYL-BENZYL)-1,1-DIOXO-3,6-BIS-PHENOXYMETHYL-1LAMBDA6-[1,2,7]THIADIAZEPANE-4,5-DIOL HOH water 1AJX PDB experimental model AHF 501 2 AHF AHF 501 B HOH 602 3 HOH HOH 602 A HOH 603 3 HOH HOH 603 A HOH 609 3 HOH HOH 609 A HOH 610 3 HOH HOH 610 A HOH 613 3 HOH HOH 613 A HOH 616 3 HOH HOH 616 A HOH 618 3 HOH HOH 618 A HOH 620 3 HOH HOH 620 A HOH 623 3 HOH HOH 623 A HOH 624 3 HOH HOH 624 A HOH 625 3 HOH HOH 625 A HOH 628 3 HOH HOH 628 A HOH 629 3 HOH HOH 629 A HOH 635 3 HOH HOH 635 A HOH 638 3 HOH HOH 638 A HOH 639 3 HOH HOH 639 A HOH 644 3 HOH HOH 644 A HOH 645 3 HOH HOH 645 A HOH 648 3 HOH HOH 648 A HOH 649 3 HOH HOH 649 A HOH 651 3 HOH HOH 651 A HOH 653 3 HOH HOH 653 A HOH 656 3 HOH HOH 656 A HOH 658 3 HOH HOH 658 A HOH 659 3 HOH HOH 659 A HOH 661 3 HOH HOH 661 A HOH 662 3 HOH HOH 662 A HOH 665 3 HOH HOH 665 A HOH 666 3 HOH HOH 666 A HOH 674 3 HOH HOH 674 A HOH 675 3 HOH HOH 675 A HOH 676 3 HOH HOH 676 A HOH 678 3 HOH HOH 678 A HOH 679 3 HOH HOH 679 A HOH 680 3 HOH HOH 680 A HOH 687 3 HOH HOH 687 A HOH 688 3 HOH HOH 688 A HOH 690 3 HOH HOH 690 A HOH 693 3 HOH HOH 693 A HOH 697 3 HOH HOH 697 A HOH 700 3 HOH HOH 700 A HOH 704 3 HOH HOH 704 A HOH 706 3 HOH HOH 706 A HOH 716 3 HOH HOH 716 A HOH 717 3 HOH HOH 717 A HOH 718 3 HOH HOH 718 A HOH 719 3 HOH HOH 719 A HOH 720 3 HOH HOH 720 A HOH 721 3 HOH HOH 721 A HOH 722 3 HOH HOH 722 A HOH 723 3 HOH HOH 723 A HOH 724 3 HOH HOH 724 A HOH 726 3 HOH HOH 726 A HOH 730 3 HOH HOH 730 A HOH 731 3 HOH HOH 731 A HOH 732 3 HOH HOH 732 A HOH 736 3 HOH HOH 736 A HOH 737 3 HOH HOH 737 A HOH 743 3 HOH HOH 743 A HOH 744 3 HOH HOH 744 A HOH 601 3 HOH HOH 601 B HOH 604 3 HOH HOH 604 B HOH 605 3 HOH HOH 605 B HOH 606 3 HOH HOH 606 B HOH 607 3 HOH HOH 607 B HOH 608 3 HOH HOH 608 B HOH 611 3 HOH HOH 611 B HOH 612 3 HOH HOH 612 B HOH 614 3 HOH HOH 614 B HOH 615 3 HOH HOH 615 B HOH 617 3 HOH HOH 617 B HOH 619 3 HOH HOH 619 B HOH 621 3 HOH HOH 621 B HOH 622 3 HOH HOH 622 B HOH 626 3 HOH HOH 626 B HOH 627 3 HOH HOH 627 B HOH 630 3 HOH HOH 630 B HOH 631 3 HOH HOH 631 B HOH 632 3 HOH HOH 632 B HOH 633 3 HOH HOH 633 B HOH 634 3 HOH HOH 634 B HOH 636 3 HOH HOH 636 B HOH 637 3 HOH HOH 637 B HOH 640 3 HOH HOH 640 B HOH 641 3 HOH HOH 641 B HOH 642 3 HOH HOH 642 B HOH 643 3 HOH HOH 643 B HOH 646 3 HOH HOH 646 B HOH 647 3 HOH HOH 647 B HOH 650 3 HOH HOH 650 B HOH 652 3 HOH HOH 652 B HOH 654 3 HOH HOH 654 B HOH 655 3 HOH HOH 655 B HOH 657 3 HOH HOH 657 B HOH 660 3 HOH HOH 660 B HOH 663 3 HOH HOH 663 B HOH 664 3 HOH HOH 664 B HOH 667 3 HOH HOH 667 B HOH 668 3 HOH HOH 668 B HOH 669 3 HOH HOH 669 B HOH 670 3 HOH HOH 670 B HOH 671 3 HOH HOH 671 B HOH 672 3 HOH HOH 672 B HOH 673 3 HOH HOH 673 B HOH 677 3 HOH HOH 677 B HOH 681 3 HOH HOH 681 B HOH 682 3 HOH HOH 682 B HOH 683 3 HOH HOH 683 B HOH 684 3 HOH HOH 684 B HOH 685 3 HOH HOH 685 B HOH 686 3 HOH HOH 686 B HOH 689 3 HOH HOH 689 B HOH 691 3 HOH HOH 691 B HOH 692 3 HOH HOH 692 B HOH 694 3 HOH HOH 694 B HOH 695 3 HOH HOH 695 B HOH 696 3 HOH HOH 696 B HOH 698 3 HOH HOH 698 B HOH 699 3 HOH HOH 699 B HOH 701 3 HOH HOH 701 B HOH 702 3 HOH HOH 702 B HOH 705 3 HOH HOH 705 B HOH 707 3 HOH HOH 707 B HOH 708 3 HOH HOH 708 B HOH 709 3 HOH HOH 709 B HOH 710 3 HOH HOH 710 B HOH 711 3 HOH HOH 711 B HOH 712 3 HOH HOH 712 B HOH 713 3 HOH HOH 713 B HOH 714 3 HOH HOH 714 B HOH 715 3 HOH HOH 715 B HOH 725 3 HOH HOH 725 B HOH 727 3 HOH HOH 727 B HOH 728 3 HOH HOH 728 B HOH 729 3 HOH HOH 729 B HOH 733 3 HOH HOH 733 B HOH 734 3 HOH HOH 734 B HOH 735 3 HOH HOH 735 B HOH 738 3 HOH HOH 738 B HOH 739 3 HOH HOH 739 B HOH 740 3 HOH HOH 740 B HOH 741 3 HOH HOH 741 B HOH 742 3 HOH HOH 742 B PRO 1 n 1 PRO 1 A GLN 2 n 2 GLN 2 A ILE 3 n 3 ILE 3 A THR 4 n 4 THR 4 A LEU 5 n 5 LEU 5 A TRP 6 n 6 TRP 6 A GLN 7 n 7 GLN 7 A ARG 8 n 8 ARG 8 A PRO 9 n 9 PRO 9 A LEU 10 n 10 LEU 10 A VAL 11 n 11 VAL 11 A THR 12 n 12 THR 12 A ILE 13 n 13 ILE 13 A LYS 14 n 14 LYS 14 A ILE 15 n 15 ILE 15 A GLY 16 n 16 GLY 16 A GLY 17 n 17 GLY 17 A GLN 18 n 18 GLN 18 A LEU 19 n 19 LEU 19 A LYS 20 n 20 LYS 20 A GLU 21 n 21 GLU 21 A ALA 22 n 22 ALA 22 A LEU 23 n 23 LEU 23 A LEU 24 n 24 LEU 24 A ASP 25 n 25 ASP 25 A THR 26 n 26 THR 26 A GLY 27 n 27 GLY 27 A ALA 28 n 28 ALA 28 A ASP 29 n 29 ASP 29 A ASP 30 n 30 ASP 30 A THR 31 n 31 THR 31 A VAL 32 n 32 VAL 32 A LEU 33 n 33 LEU 33 A GLU 34 n 34 GLU 34 A GLU 35 n 35 GLU 35 A MET 36 n 36 MET 36 A SER 37 n 37 SER 37 A LEU 38 n 38 LEU 38 A PRO 39 n 39 PRO 39 A GLY 40 n 40 GLY 40 A ARG 41 n 41 ARG 41 A TRP 42 n 42 TRP 42 A LYS 43 n 43 LYS 43 A PRO 44 n 44 PRO 44 A LYS 45 n 45 LYS 45 A MET 46 n 46 MET 46 A ILE 47 n 47 ILE 47 A GLY 48 n 48 GLY 48 A GLY 49 n 49 GLY 49 A ILE 50 n 50 ILE 50 A GLY 51 n 51 GLY 51 A GLY 52 n 52 GLY 52 A PHE 53 n 53 PHE 53 A ILE 54 n 54 ILE 54 A LYS 55 n 55 LYS 55 A VAL 56 n 56 VAL 56 A ARG 57 n 57 ARG 57 A GLN 58 n 58 GLN 58 A TYR 59 n 59 TYR 59 A ASP 60 n 60 ASP 60 A GLN 61 n 61 GLN 61 A ILE 62 n 62 ILE 62 A LEU 63 n 63 LEU 63 A ILE 64 n 64 ILE 64 A GLU 65 n 65 GLU 65 A ILE 66 n 66 ILE 66 A CYS 67 n 67 CYS 67 A GLY 68 n 68 GLY 68 A HIS 69 n 69 HIS 69 A LYS 70 n 70 LYS 70 A ALA 71 n 71 ALA 71 A ILE 72 n 72 ILE 72 A GLY 73 n 73 GLY 73 A THR 74 n 74 THR 74 A VAL 75 n 75 VAL 75 A LEU 76 n 76 LEU 76 A VAL 77 n 77 VAL 77 A GLY 78 n 78 GLY 78 A PRO 79 n 79 PRO 79 A THR 80 n 80 THR 80 A PRO 81 n 81 PRO 81 A VAL 82 n 82 VAL 82 A ASN 83 n 83 ASN 83 A ILE 84 n 84 ILE 84 A ILE 85 n 85 ILE 85 A GLY 86 n 86 GLY 86 A ARG 87 n 87 ARG 87 A ASN 88 n 88 ASN 88 A LEU 89 n 89 LEU 89 A LEU 90 n 90 LEU 90 A THR 91 n 91 THR 91 A GLN 92 n 92 GLN 92 A ILE 93 n 93 ILE 93 A GLY 94 n 94 GLY 94 A CYS 95 n 95 CYS 95 A THR 96 n 96 THR 96 A LEU 97 n 97 LEU 97 A ASN 98 n 98 ASN 98 A PHE 99 n 99 PHE 99 A PRO 1 n 1 PRO 1 B GLN 2 n 2 GLN 2 B ILE 3 n 3 ILE 3 B THR 4 n 4 THR 4 B LEU 5 n 5 LEU 5 B TRP 6 n 6 TRP 6 B GLN 7 n 7 GLN 7 B ARG 8 n 8 ARG 8 B PRO 9 n 9 PRO 9 B LEU 10 n 10 LEU 10 B VAL 11 n 11 VAL 11 B THR 12 n 12 THR 12 B ILE 13 n 13 ILE 13 B LYS 14 n 14 LYS 14 B ILE 15 n 15 ILE 15 B GLY 16 n 16 GLY 16 B GLY 17 n 17 GLY 17 B GLN 18 n 18 GLN 18 B LEU 19 n 19 LEU 19 B LYS 20 n 20 LYS 20 B GLU 21 n 21 GLU 21 B ALA 22 n 22 ALA 22 B LEU 23 n 23 LEU 23 B LEU 24 n 24 LEU 24 B ASP 25 n 25 ASP 25 B THR 26 n 26 THR 26 B GLY 27 n 27 GLY 27 B ALA 28 n 28 ALA 28 B ASP 29 n 29 ASP 29 B ASP 30 n 30 ASP 30 B THR 31 n 31 THR 31 B VAL 32 n 32 VAL 32 B LEU 33 n 33 LEU 33 B GLU 34 n 34 GLU 34 B GLU 35 n 35 GLU 35 B MET 36 n 36 MET 36 B SER 37 n 37 SER 37 B LEU 38 n 38 LEU 38 B PRO 39 n 39 PRO 39 B GLY 40 n 40 GLY 40 B ARG 41 n 41 ARG 41 B TRP 42 n 42 TRP 42 B LYS 43 n 43 LYS 43 B PRO 44 n 44 PRO 44 B LYS 45 n 45 LYS 45 B MET 46 n 46 MET 46 B ILE 47 n 47 ILE 47 B GLY 48 n 48 GLY 48 B GLY 49 n 49 GLY 49 B ILE 50 n 50 ILE 50 B GLY 51 n 51 GLY 51 B GLY 52 n 52 GLY 52 B PHE 53 n 53 PHE 53 B ILE 54 n 54 ILE 54 B LYS 55 n 55 LYS 55 B VAL 56 n 56 VAL 56 B ARG 57 n 57 ARG 57 B GLN 58 n 58 GLN 58 B TYR 59 n 59 TYR 59 B ASP 60 n 60 ASP 60 B GLN 61 n 61 GLN 61 B ILE 62 n 62 ILE 62 B LEU 63 n 63 LEU 63 B ILE 64 n 64 ILE 64 B GLU 65 n 65 GLU 65 B ILE 66 n 66 ILE 66 B CYS 67 n 67 CYS 67 B GLY 68 n 68 GLY 68 B HIS 69 n 69 HIS 69 B LYS 70 n 70 LYS 70 B ALA 71 n 71 ALA 71 B ILE 72 n 72 ILE 72 B GLY 73 n 73 GLY 73 B THR 74 n 74 THR 74 B VAL 75 n 75 VAL 75 B LEU 76 n 76 LEU 76 B VAL 77 n 77 VAL 77 B GLY 78 n 78 GLY 78 B PRO 79 n 79 PRO 79 B THR 80 n 80 THR 80 B PRO 81 n 81 PRO 81 B VAL 82 n 82 VAL 82 B ASN 83 n 83 ASN 83 B ILE 84 n 84 ILE 84 B ILE 85 n 85 ILE 85 B GLY 86 n 86 GLY 86 B ARG 87 n 87 ARG 87 B ASN 88 n 88 ASN 88 B LEU 89 n 89 LEU 89 B LEU 90 n 90 LEU 90 B THR 91 n 91 THR 91 B GLN 92 n 92 GLN 92 B ILE 93 n 93 ILE 93 B GLY 94 n 94 GLY 94 B CYS 95 n 95 CYS 95 B THR 96 n 96 THR 96 B LEU 97 n 97 LEU 97 B ASN 98 n 98 ASN 98 B PHE 99 n 99 PHE 99 B author_and_software_defined_assembly PISA 2 dimeric 5170 -34 9360 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 3 A N ILE 3 B O LEU 97 B O LEU 97 B O ASN 98 B O ASN 98 A N THR 96 A N THR 96 A O LEU 97 A O LEU 97 B N ILE 3 B N ILE 3 A O GLY 49 A O GLY 49 A N GLY 52 A N GLY 52 A N ILE 66 A N ILE 66 A O HIS 69 A O HIS 69 A N LEU 76 A N LEU 76 A O THR 31 A O THR 31 A O VAL 32 A O VAL 32 A N ILE 84 A N ILE 84 A N ILE 85 A N ILE 85 A O LEU 23 A O LEU 23 A O ALA 22 A O ALA 22 A N VAL 11 A N VAL 11 A O LYS 14 A O LYS 14 A N GLU 65 A N GLU 65 B N GLY 49 B N GLY 49 B O GLY 52 B O GLY 52 B N ILE 66 B N ILE 66 B O HIS 69 B O HIS 69 B O LEU 76 B O LEU 76 B N LEU 33 B N LEU 33 B O VAL 32 B O VAL 32 B N ILE 84 B N ILE 84 B N ILE 85 B N ILE 85 B O LEU 23 B O LEU 23 B O ALA 22 B O ALA 22 B N VAL 11 B N VAL 11 B O LYS 14 B O LYS 14 B N GLU 65 B N GLU 65 1 B C42 AHF 501 PLANAR 1 A PRO 79 -72.43 49.72 0.2300000 0.1949000 0.1991000 1.8 50 978 22833 19059 83.5 Random 1 THROUGHOUT MOLECULAR REPLACEMENT 1ajx Engh & Huber 1.8 50 143 1706 47 0 1516 1.2005 0.0058 0.2307000 0.1949000 50 978 19059 85 1.8 50 1G35 22833 19437 0.0960000 1 7.7 15.3 85.1 0.3100000 1.8 25.0 1795 1.16 80.2 refinement CNS data reduction DENZO data scaling SCALEPACK phasing CNS CRYSTAL STRUCTURE OF HIV-1 PROTEASE IN COMPLEX WITH INHIBITOR, AHA024 1 N N 1 N N 2 N N 3 N N 3 N N A GLY 86 A GLY 86 HELX_P A THR 91 A THR 91 1 1 6 A GLN 92 A GLN 92 HELX_P A GLY 94 A GLY 94 5 2 3 B GLY 86 B GLY 86 HELX_P B THR 91 B THR 91 1 3 6 HYDROLASE Protein-inhibitor complex, HYDROLASE POL_HV1PV UNP 1 69 P03368 PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF 69 167 1G35 1 99 P03368 A 1 1 99 69 167 1G35 1 99 P03368 B 1 1 99 4 8 8 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel parallel anti-parallel anti-parallel A GLN 2 A GLN 2 A ILE 3 A ILE 3 B THR 96 B THR 96 B ASN 98 B ASN 98 A THR 96 A THR 96 A ASN 98 A ASN 98 B GLN 2 B GLN 2 B ILE 3 B ILE 3 A LYS 43 A LYS 43 A GLY 49 A GLY 49 A GLY 52 A GLY 52 A ILE 66 A ILE 66 A HIS 69 A HIS 69 A VAL 77 A VAL 77 A THR 31 A THR 31 A LEU 33 A LEU 33 A ILE 84 A ILE 84 A ILE 85 A ILE 85 A GLN 18 A GLN 18 A LEU 24 A LEU 24 A LEU 10 A LEU 10 A ILE 15 A ILE 15 A GLY 52 A GLY 52 A ILE 66 A ILE 66 B LYS 43 B LYS 43 B GLY 49 B GLY 49 B GLY 52 B GLY 52 B ILE 66 B ILE 66 B HIS 69 B HIS 69 B VAL 77 B VAL 77 B VAL 32 B VAL 32 B LEU 33 B LEU 33 B ILE 84 B ILE 84 B ILE 85 B ILE 85 B GLN 18 B GLN 18 B LEU 24 B LEU 24 B LEU 10 B LEU 10 B ILE 15 B ILE 15 B GLY 52 B GLY 52 B ILE 66 B ILE 66 BINDING SITE FOR RESIDUE AHF B 501 B AHF 501 Software 20 A ARG 8 A ARG 8 20 1_555 A ASP 25 A ASP 25 20 1_555 A GLY 27 A GLY 27 20 1_555 A ALA 28 A ALA 28 20 1_555 A ASP 29 A ASP 29 20 1_555 A ASP 30 A ASP 30 20 1_555 A GLY 48 A GLY 48 20 1_555 A ILE 50 A ILE 50 20 1_555 A PRO 81 A PRO 81 20 1_555 B ARG 8 B ARG 8 20 1_555 B ASP 25 B ASP 25 20 1_555 B GLY 27 B GLY 27 20 1_555 B ALA 28 B ALA 28 20 1_555 B ASP 30 B ASP 30 20 1_555 B VAL 32 B VAL 32 20 1_555 B GLY 48 B GLY 48 20 1_555 B GLY 49 B GLY 49 20 1_555 B ILE 50 B ILE 50 20 1_555 B HOH 654 E HOH 20 1_555 B HOH 707 E HOH 20 1_555 18 P 21 21 2