37.56
11.056
30.379
15.024
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37.56
11.117
30.654
13.523
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12.057
31.797
13.197
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37.56
9.725
30.838
12.927
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37.56
11.818
29.346
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37.56
11.409
28.894
11.506
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37.56
9.903
28.814
11.454
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37.56
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28.597
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27.715
12.326
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37.56
8.188
28.260
13.066
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26.708
11.306
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37.56
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27.652
10.200
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37.56
8.087
27.132
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37.56
6.971
27.675
8.187
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37.56
6.309
28.572
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37.56
6.643
27.216
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37.56
7.380
26.261
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37.56
7.015
25.852
5.160
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37.56
8.527
25.690
7.042
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37.56
8.842
26.156
8.268
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22.97
7.634
27.490
14.375
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22.88
6.316
28.069
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22.38
8.719
27.473
15.407
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19.00
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25.997
13.873
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14.33
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24.895
14.763
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11.06
7.747
23.597
14.011
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6.466
23.038
13.654
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10.21
8.534
23.707
12.709
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8.81
9.411
22.590
12.560
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7.460
23.689
11.635
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7.71
6.374
22.833
12.248
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6.86
5.034
23.230
11.855
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6.86
4.595
24.508
11.688
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6.86
3.303
24.598
11.501
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6.86
2.880
23.278
11.494
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6.86
1.591
22.742
11.348
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6.86
0.521
23.346
11.229
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6.86
1.611
21.349
11.367
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6.86
2.736
20.581
11.518
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6.86
2.560
19.260
11.482
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6.86
3.948
21.074
11.687
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6.86
3.946
22.422
11.665
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8.28
10.127
22.346
11.154
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3
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1
3
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7.42
11.331
21.502
11.375
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1
3
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8.91
10.262
23.665
10.493
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8.03
9.069
21.459
10.365
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3
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7.90
8.708
20.174
10.896
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3
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6.86
8.126
19.298
9.817
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3
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6.86
6.798
19.757
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3
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6.86
8.895
19.291
8.507
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3
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7.86
8.821
17.961
7.995
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3
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6.86
8.117
20.281
7.654
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3
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6.86
6.690
20.126
8.153
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1
3
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6.86
5.833
21.324
8.108
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3
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1
3
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6.86
4.457
21.136
8.181
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3
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1
3
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6.86
4.021
19.972
8.216
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3
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1
3
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6.86
3.637
22.214
8.209
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3
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1
3
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6.86
4.149
23.444
8.157
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3
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1
3
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6.86
3.300
24.472
8.218
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3
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1
3
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6.86
5.555
23.672
8.048
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3
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1
3
1.00
1
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6.86
6.354
22.591
8.026
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3
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C6
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1
3
1.00
1
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16.95
9.453
17.603
6.563
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4
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1
4
1.00
1
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18.08
10.704
16.835
6.789
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4
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DA
1
4
1.00
1
O
18.18
9.494
18.800
5.689
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4
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1
4
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1
O
16.83
8.368
16.603
5.968
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4
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1
4
1.00
1
O
17.26
7.801
15.570
6.785
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4
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A
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DA
1
4
1.00
1
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18.11
6.425
15.202
6.285
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4
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A
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1
4
1.00
1
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17.82
5.553
16.342
6.463
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4
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1
4
1.00
1
O
19.64
6.360
14.838
4.801
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4
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1
4
1.00
1
C
21.54
5.447
13.747
4.596
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4
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1
4
1.00
1
O
18.99
5.844
16.106
4.145
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4
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A
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1
4
1.00
1
C
17.27
4.967
16.709
5.224
A
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4
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A
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1
4
1.00
1
C
8.92
4.911
18.169
5.155
A
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4
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1
4
1.00
1
N
7.79
5.939
19.066
4.993
A
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4
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1
4
1.00
1
C
7.18
5.540
20.310
4.892
A
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4
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A
N7
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1
4
1.00
1
N
6.86
4.159
20.229
5.010
A
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4
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A
C5
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1
4
1.00
1
C
6.86
3.143
21.198
4.976
A
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4
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A
C6
DA
1
4
1.00
1
C
6.86
3.356
22.498
4.789
A
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4
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A
N6
DA
1
4
1.00
1
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6.86
1.873
20.777
5.137
A
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4
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A
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1
4
1.00
1
N
6.86
1.647
19.471
5.317
A
C2
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4
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A
C2
DA
1
4
1.00
1
C
6.86
2.510
18.467
5.361
A
N3
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4
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A
N3
DA
1
4
1.00
1
N
7.78
3.763
18.917
5.197
A
C4
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4
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A
C4
DA
1
4
1.00
1
C
25.70
4.849
13.453
3.120
A
P
DA
5
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A
P
DA
1
5
1.00
1
P
26.06
4.645
11.987
3.022
A
OP1
DA
5
ATOM
A
OP1
DA
1
5
1.00
1
O
25.22
5.642
14.148
2.069
A
OP2
DA
5
ATOM
A
OP2
DA
1
5
1.00
1
O
25.25
3.422
14.160
3.157
A
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5
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A
O5'
DA
1
5
1.00
1
O
25.31
2.372
13.699
4.037
A
C5'
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5
ATOM
A
C5'
DA
1
5
1.00
1
C
23.11
1.046
13.964
3.374
A
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DA
5
ATOM
A
C4'
DA
1
5
1.00
1
C
23.01
0.942
15.396
3.189
A
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5
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A
O4'
DA
1
5
1.00
1
O
21.88
1.081
13.369
1.977
A
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5
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A
C3'
DA
1
5
1.00
1
C
21.26
-0.228
12.973
1.495
A
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5
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A
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DA
1
5
1.00
1
O
21.04
1.604
14.513
1.124
A
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5
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A
C2'
DA
1
5
1.00
1
C
21.12
1.055
15.739
1.817
A
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5
ATOM
A
C1'
DA
1
5
1.00
1
C
10.79
1.954
16.884
1.721
A
N9
DA
5
ATOM
A
N9
DA
1
5
1.00
1
N
10.47
3.320
16.865
1.606
A
C8
DA
5
ATOM
A
C8
DA
1
5
1.00
1
C
10.50
3.862
18.058
1.551
A
N7
DA
5
ATOM
A
N7
DA
1
5
1.00
1
N
9.22
2.777
18.922
1.629
A
C5
DA
5
ATOM
A
C5
DA
1
5
1.00
1
C
8.51
2.679
20.327
1.619
A
C6
DA
5
ATOM
A
C6
DA
1
5
1.00
1
C
8.14
3.724
21.149
1.535
A
N6
DA
5
ATOM
A
N6
DA
1
5
1.00
1
N
8.64
1.449
20.866
1.705
A
N1
DA
5
ATOM
A
N1
DA
1
5
1.00
1
N
10.05
0.396
20.049
1.809
A
C2
DA
5
ATOM
A
C2
DA
1
5
1.00
1
C
9.76
0.359
18.717
1.836
A
N3
DA
5
ATOM
A
N3
DA
1
5
1.00
1
N
9.83
1.598
18.210
1.736
A
C4
DA
5
ATOM
A
C4
DA
1
5
1.00
1
C
13.40
-0.582
13.015
-0.075
A
P
DT
6
ATOM
A
P
DT
1
6
1.00
1
P
13.86
-1.671
12.008
-0.328
A
OP1
DT
6
ATOM
A
OP1
DT
1
6
1.00
1
O
12.88
0.716
12.912
-0.825
A
OP2
DT
6
ATOM
A
OP2
DT
1
6
1.00
1
O
11.86
-1.171
14.498
-0.283
A
O5'
DT
6
ATOM
A
O5'
DT
1
6
1.00
1
O
8.68
-2.064
15.099
0.696
A
C5'
DT
6
ATOM
A
C5'
DT
1
6
1.00
1
C
7.14
-2.765
16.319
0.147
A
C4'
DT
6
ATOM
A
C4'
DT
1
6
1.00
1
C
6.86
-1.882
17.463
0.193
A
O4'
DT
6
ATOM
A
O4'
DT
1
6
1.00
1
O
7.08
-3.261
16.220
-1.294
A
C3'
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6
ATOM
A
C3'
DT
1
6
1.00
1
C
8.19
-4.561
16.814
-1.394
A
O3'
DT
6
ATOM
A
O3'
DT
1
6
1.00
1
O
6.86
-2.247
17.039
-2.075
A
C2'
DT
6
ATOM
A
C2'
DT
1
6
1.00
1
C
6.86
-1.838
18.102
-1.077
A
C1'
DT
6
ATOM
A
C1'
DT
1
6
1.00
1
C
6.86
-0.478
18.660
-1.269
A
N1
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6
ATOM
A
N1
DT
1
6
1.00
1
N
6.86
-0.333
20.032
-1.371
A
C2
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6
ATOM
A
C2
DT
1
6
1.00
1
C
6.86
-1.262
20.813
-1.324
A
O2
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6
ATOM
A
O2
DT
1
6
1.00
1
O
6.86
0.955
20.458
-1.541
A
N3
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6
ATOM
A
N3
DT
1
6
1.00
1
N
6.86
2.088
19.682
-1.637
A
C4
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6
ATOM
A
C4
DT
1
6
1.00
1
C
6.86
3.172
20.219
-1.823
A
O4
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6
ATOM
A
O4
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1
6
1.00
1
O
6.86
1.870
18.253
-1.514
A
C5
DT
6
ATOM
A
C5
DT
1
6
1.00
1
C
6.86
3.043
17.324
-1.580
A
C7
DT
6
ATOM
A
C7
DT
1
6
1.00
1
C
6.86
0.613
17.823
-1.340
A
C6
DT
6
ATOM
A
C6
DT
1
6
1.00
1
C
9.58
-5.194
17.136
-2.840
A
P
DT
7
ATOM
A
P
DT
1
7
1.00
1
P
10.43
-6.668
16.968
-2.729
A
OP1
DT
7
ATOM
A
OP1
DT
1
7
1.00
1
O
8.24
-4.448
16.401
-3.901
A
OP2
DT
7
ATOM
A
OP2
DT
1
7
1.00
1
O
9.08
-4.947
18.697
-3.001
A
O5'
DT
7
ATOM
A
O5'
DT
1
7
1.00
1
O
8.38
-5.474
19.605
-2.030
A
C5'
DT
7
ATOM
A
C5'
DT
1
7
1.00
1
C
8.55
-5.364
21.022
-2.534
A
C4'
DT
7
ATOM
A
C4'
DT
1
7
1.00
1
C
6.86
-3.973
21.336
-2.760
A
O4'
DT
7
ATOM
A
O4'
DT
1
7
1.00
1
O
9.64
-6.080
21.307
-3.854
A
C3'
DT
7
ATOM
A
C3'
DT
1
7
1.00
1
C
11.60
-6.606
22.632
-3.768
A
O3'
DT
7
ATOM
A
O3'
DT
1
7
1.00
1
O
7.08
-4.969
21.224
-4.890
A
C2'
DT
7
ATOM
A
C2'
DT
1
7
1.00
1
C
6.86
-3.753
21.692
-4.117
A
C1'
DT
7
ATOM
A
C1'
DT
1
7
1.00
1
C
6.86
-2.460
21.107
-4.515
A
N1
DT
7
ATOM
A
N1
DT
1
7
1.00
1
N
6.86
-1.413
21.984
-4.667
A
C2
DT
7
ATOM
A
C2
DT
1
7
1.00
1
C
6.86
-1.540
23.190
-4.534
A
O2
DT
7
ATOM
A
O2
DT
1
7
1.00
1
O
6.86
-0.212
21.402
-4.971
A
N3
DT
7
ATOM
A
N3
DT
1
7
1.00
1
N
6.86
0.042
20.055
-5.126
A
C4
DT
7
ATOM
A
C4
DT
1
7
1.00
1
C
6.86
1.184
19.680
-5.355
A
O4
DT
7
ATOM
A
O4
DT
1
7
1.00
1
O
6.86
-1.110
19.185
-4.978
A
C5
DT
7
ATOM
A
C5
DT
1
7
1.00
1
C
6.86
-0.928
17.713
-5.136
A
C7
DT
7
ATOM
A
C7
DT
1
7
1.00
1
C
6.86
-2.293
19.749
-4.696
A
C6
DT
7
ATOM
A
C6
DT
1
7
1.00
1
C
12.94
-7.541
23.199
-4.932
A
P
DG
8
ATOM
A
P
DG
1
8
1.00
1
P
12.29
-8.395
24.251
-4.315
A
OP1
DG
8
ATOM
A
OP1
DG
1
8
1.00
1
O
13.79
-8.175
22.036
-5.625
A
OP2
DG
8
ATOM
A
OP2
DG
1
8
1.00
1
O
10.66
-6.501
23.891
-5.924
A
O5'
DG
8
ATOM
A
O5'
DG
1
8
1.00
1
O
8.57
-5.894
25.151
-5.588
A
C5'
DG
8
ATOM
A
C5'
DG
1
8
1.00
1
C
8.29
-5.037
25.633
-6.733
A
C4'
DG
8
ATOM
A
C4'
DG
1
8
1.00
1
C
7.52
-3.790
24.907
-6.807
A
O4'
DG
8
ATOM
A
O4'
DG
1
8
1.00
1
O
8.23
-5.681
25.525
-8.118
A
C3'
DG
8
ATOM
A
C3'
DG
1
8
1.00
1
C
9.30
-5.253
26.656
-8.877
A
O3'
DG
8
ATOM
A
O3'
DG
1
8
1.00
1
O
6.88
-4.999
24.313
-8.721
A
C2'
DG
8
ATOM
A
C2'
DG
1
8
1.00
1
C
6.86
-3.605
24.461
-8.142
A
C1'
DG
8
ATOM
A
C1'
DG
1
8
1.00
1
C
6.86
-2.754
23.271
-8.132
A
N9
DG
8
ATOM
A
N9
DG
1
8
1.00
1
N
6.86
-3.148
21.956
-8.054
A
C8
DG
8
ATOM
A
C8
DG
1
8
1.00
1
C
6.86
-2.148
21.118
-8.109
A
N7
DG
8
ATOM
A
N7
DG
1
8
1.00
1
N
6.86
-1.025
21.927
-8.220
A
C5
DG
8
ATOM
A
C5
DG
1
8
1.00
1
C
6.86
0.352
21.585
-8.323
A
C6
DG
8
ATOM
A
C6
DG
1
8
1.00
1
C
6.86
0.881
20.456
-8.341
A
O6
DG
8
ATOM
A
O6
DG
1
8
1.00
1
O
6.86
1.149
22.718
-8.413
A
N1
DG
8
ATOM
A
N1
DG
1
8
1.00
1
N
6.86
0.693
24.005
-8.400
A
C2
DG
8
ATOM
A
C2
DG
1
8
1.00
1
C
6.86
1.633
24.961
-8.476
A
N2
DG
8
ATOM
A
N2
DG
1
8
1.00
1
N
6.86
-0.582
24.337
-8.313
A
N3
DG
8
ATOM
A
N3
DG
1
8
1.00
1
N
6.86
-1.380
23.254
-8.227
A
C4
DG
8
ATOM
A
C4
DG
1
8
1.00
1
C
8.70
-6.258
27.390
-9.893
A
P
DC
9
ATOM
A
P
DC
1
9
1.00
1
P
7.59
-7.053
28.329
-9.066
A
OP1
DC
9
ATOM
A
OP1
DC
1
9
1.00
1
O
8.46
-6.963
26.381
-10.734
A
OP2
DC
9
ATOM
A
OP2
DC
1
9
1.00
1
O
8.22
-5.259
28.215
-10.829
A
O5'
DC
9
ATOM
A
O5'
DC
1
9
1.00
1
O
7.96
-4.327
29.179
-10.272
A
C5'
DC
9
ATOM
A
C5'
DC
1
9
1.00
1
C
7.30
-3.005
29.132
-11.007
A
C4'
DC
9
ATOM
A
C4'
DC
1
9
1.00
1
C
6.86
-2.334
27.881
-10.717
A
O4'
DC
9
ATOM
A
O4'
DC
1
9
1.00
1
O
7.63
-3.062
29.241
-12.535
A
C3'
DC
9
ATOM
A
C3'
DC
1
9
1.00
1
C
8.19
-1.924
29.978
-13.012
A
O3'
DC
9
ATOM
A
O3'
DC
1
9
1.00
1
O
6.91
-2.888
27.809
-12.987
A
C2'
DC
9
ATOM
A
C2'
DC
1
9
1.00
1
C
6.86
-1.956
27.258
-11.929
A
C1'
DC
9
ATOM
A
C1'
DC
1
9
1.00
1
C
6.86
-2.062
25.803
-11.765
A
N1
DC
9
ATOM
A
N1
DC
1
9
1.00
1
N
6.86
-0.908
25.038
-11.881
A
C2
DC
9
ATOM
A
C2
DC
1
9
1.00
1
C
7.27
0.173
25.621
-11.995
A
O2
DC
9
ATOM
A
O2
DC
1
9
1.00
1
O
6.86
-0.997
23.689
-11.857
A
N3
DC
9
ATOM
A
N3
DC
1
9
1.00
1
N
6.86
-2.186
23.109
-11.690
A
C4
DC
9
ATOM
A
C4
DC
1
9
1.00
1
C
6.86
-2.243
21.774
-11.707
A
N4
DC
9
ATOM
A
N4
DC
1
9
1.00
1
N
6.86
-3.375
23.869
-11.506
A
C5
DC
9
ATOM
A
C5
DC
1
9
1.00
1
C
7.08
-3.268
25.204
-11.550
A
C6
DC
9
ATOM
A
C6
DC
1
9
1.00
1
C
9.00
-1.981
30.720
-14.446
A
P
DG
10
ATOM
A
P
DG
1
10
1.00
1
P
7.10
-0.693
31.491
-14.576
A
OP1
DG
10
ATOM
A
OP1
DG
1
10
1.00
1
O
8.73
-3.274
31.446
-14.520
A
OP2
DG
10
ATOM
A
OP2
DG
1
10
1.00
1
O
9.85
-2.130
29.540
-15.514
A
O5'
DG
10
ATOM
A
O5'
DG
1
10
1.00
1
O
10.68
-1.235
28.409
-15.557
A
C5'
DG
10
ATOM
A
C5'
DG
1
10
1.00
1
C
11.01
-1.378
27.673
-16.875
A
C4'
DG
10
ATOM
A
C4'
DG
1
10
1.00
1
C
10.72
-2.714
27.141
-16.996
A
O4'
DG
10
ATOM
A
O4'
DG
1
10
1.00
1
O
11.12
-1.168
28.528
-18.123
A
C3'
DG
10
ATOM
A
C3'
DG
1
10
1.00
1
C
11.85
-0.507
27.784
-19.151
A
O3'
DG
10
ATOM
A
O3'
DG
1
10
1.00
1
O
9.93
-2.576
28.945
-18.527
A
C2'
DG
10
ATOM
A
C2'
DG
1
10
1.00
1
C
10.08
-3.498
27.902
-17.912
A
C1'
DG
10
ATOM
A
C1'
DG
1
10
1.00
1
C
6.86
-4.559
28.519
-17.127
A
N9
DG
10
ATOM
A
N9
DG
1
10
1.00
1
N
6.86
-5.006
29.814
-17.194
A
C8
DG
10
ATOM
A
C8
DG
1
10
1.00
1
C
7.81
-5.908
30.099
-16.283
A
N7
DG
10
ATOM
A
N7
DG
1
10
1.00
1
N
6.95
-6.059
28.902
-15.579
A
C5
DG
10
ATOM
A
C5
DG
1
10
1.00
1
C
6.86
-6.866
28.581
-14.454
A
C6
DG
10
ATOM
A
C6
DG
1
10
1.00
1
C
6.86
-7.576
29.326
-13.773
A
O6
DG
10
ATOM
A
O6
DG
1
10
1.00
1
O
6.86
-6.761
27.235
-14.114
A
N1
DG
10
ATOM
A
N1
DG
1
10
1.00
1
N
6.86
-5.946
26.317
-14.732
A
C2
DG
10
ATOM
A
C2
DG
1
10
1.00
1
C
6.86
-5.988
25.048
-14.256
A
N2
DG
10
ATOM
A
N2
DG
1
10
1.00
1
N
7.04
-5.151
26.616
-15.743
A
N3
DG
10
ATOM
A
N3
DG
1
10
1.00
1
N
6.99
-5.264
27.911
-16.118
A
C4
DG
10
ATOM
A
C4
DG
1
10
1.00
1
C
11.32
13.962
32.867
13.306
A
ZN
ZN
11
HETATM
B
ZN
ZN
2
0.5
1
ZN
19.14
-6.808
32.097
-16.306
A
ZN
ZN
12
HETATM
C
ZN
ZN
2
0.90
1
ZN
25.64
2.907
26.615
12.189
A
ZN
ZN
13
HETATM
D
ZN
ZN
2
0.75
1
ZN
21.80
-8.485
31.439
-15.223
A
O
HOH
14
HETATM
E
O
HOH
3
0.90
1
O
21.80
-5.137
32.759
-17.389
A
O
HOH
15
HETATM
E
O
HOH
3
0.90
1
O
21.80
-7.571
34.054
-16.287
A
O
HOH
16
HETATM
E
O
HOH
3
0.90
1
O
21.80
-7.824
31.723
-18.106
A
O
HOH
17
HETATM
E
O
HOH
3
0.90
1
O
21.80
-5.797
32.474
-14.508
A
O
HOH
18
HETATM
E
O
HOH
3
0.90
1
O
23.17
1.385
25.966
13.484
A
O
HOH
19
HETATM
E
O
HOH
3
0.75
1
O
23.17
4.430
27.267
10.897
A
O
HOH
20
HETATM
E
O
HOH
3
0.75
1
O
23.17
2.671
28.579
12.900
A
O
HOH
21
HETATM
E
O
HOH
3
0.75
1
O
23.17
1.481
26.984
10.695
A
O
HOH
22
HETATM
E
O
HOH
3
0.75
1
O
23.17
4.335
26.248
13.686
A
O
HOH
23
HETATM
E
O
HOH
3
0.75
1
O
8.20
-3.199
19.189
2.241
A
O
HOH
24
HETATM
E
O
HOH
3
1.00
1
O
16.06
13.274
32.847
11.319
A
O
HOH
25
HETATM
E
O
HOH
3
1.00
1
O
8.20
-6.175
16.314
2.925
A
O
HOH
26
HETATM
E
O
HOH
3
1.00
1
O
25.26
-2.700
22.043
-0.001
A
O
HOH
27
HETATM
E
O
HOH
3
0.5
1
O
8.20
7.991
22.059
0.000
A
O
HOH
28
HETATM
E
O
HOH
3
0.5
1
O
25.95
5.620
14.823
-1.172
A
O
HOH
29
HETATM
E
O
HOH
3
1.00
1
O
8.20
3.909
13.191
-4.073
A
O
HOH
30
HETATM
E
O
HOH
3
1.00
1
O
15.85
-4.120
8.635
2.259
A
O
HOH
31
HETATM
E
O
HOH
3
1.00
1
O
8.20
-10.889
23.906
-2.586
A
O
HOH
32
HETATM
E
O
HOH
3
1.00
1
O
8.20
-2.029
17.912
-8.623
A
O
HOH
33
HETATM
E
O
HOH
3
1.00
1
O
29.10
0.204
29.613
11.308
A
O
HOH
34
HETATM
E
O
HOH
3
1.00
1
O
8.20
12.508
20.365
1.219
A
O
HOH
35
HETATM
E
O
HOH
3
1.00
1
O
8.20
10.938
14.190
5.129
A
O
HOH
36
HETATM
E
O
HOH
3
1.00
1
O
15.03
4.468
32.072
8.184
A
O
HOH
37
HETATM
E
O
HOH
3
1.00
1
O
8.20
-10.268
27.716
-14.097
A
O
HOH
38
HETATM
E
O
HOH
3
1.00
1
O
22.79
14.648
27.144
0.705
A
O
HOH
39
HETATM
E
O
HOH
3
1.00
1
O
12.94
-0.984
17.051
5.572
A
O
HOH
40
HETATM
E
O
HOH
3
1.00
1
O
8.20
-6.292
18.801
-7.080
A
O
HOH
41
HETATM
E
O
HOH
3
1.00
1
O
36.26
-14.007
11.427
11.414
A
O
HOH
42
HETATM
E
O
HOH
3
1.00
1
O
38.90
11.398
26.463
14.992
A
O
HOH
43
HETATM
E
O
HOH
3
1.00
1
O
38.90
10.048
28.878
-0.741
A
O
HOH
44
HETATM
E
O
HOH
3
1.00
1
O
38.90
9.096
19.483
2.947
A
O
HOH
45
HETATM
E
O
HOH
3
1.00
1
O
38.90
-9.095
26.948
-5.079
A
O
HOH
46
HETATM
E
O
HOH
3
1.00
1
O
38.90
6.086
34.218
10.785
A
O
HOH
47
HETATM
E
O
HOH
3
1.00
1
O
38.90
15.564
32.309
5.370
A
O
HOH
48
HETATM
E
O
HOH
3
1.00
1
O
38.90
12.996
25.477
10.597
A
O
HOH
49
HETATM
E
O
HOH
3
1.00
1
O
38.90
-5.282
13.169
6.770
A
O
HOH
50
HETATM
E
O
HOH
3
1.00
1
O
38.90
-2.095
11.616
4.196
A
O
HOH
51
HETATM
E
O
HOH
3
1.00
1
O
32.09
-12.048
14.404
10.373
A
O
HOH
52
HETATM
E
O
HOH
3
1.00
1
O
0.035817
0.000000
0.000000
0.000000
0.022681
0.000000
0.000000
0.000000
0.018790
0.00000
0.00000
0.00000
Soler-Lopez, M.
Malinina, L.
Tereshko, V.
Zarytova, V.
Subirana, J.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90
90
90
27.92
44.09
53.22
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
N
C
N
12
R
C
Y
13
N
N
Y
14
N
C
Y
15
N
N
Y
16
N
C
Y
17
N
C
N
18
N
N
Y
19
N
N
Y
20
N
C
Y
21
N
N
Y
22
N
C
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
O
N
38
N
P
N
39
N
O
N
40
N
O
N
41
N
O
N
42
N
C
N
43
R
C
N
44
N
O
N
45
S
C
N
46
N
O
N
47
N
C
N
48
R
C
N
49
N
N
N
50
N
C
N
51
N
O
N
52
N
N
N
53
N
C
N
54
N
N
N
55
N
C
N
56
N
C
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
O
N
72
N
P
N
73
N
O
N
74
N
O
N
75
N
O
N
76
N
C
N
77
R
C
N
78
N
O
N
79
S
C
N
80
N
O
N
81
N
C
N
82
R
C
Y
83
N
N
Y
84
N
C
Y
85
N
N
Y
86
N
C
N
87
N
C
N
88
N
O
N
89
N
N
N
90
N
C
N
91
N
N
N
92
N
N
Y
93
N
C
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
O
N
109
N
P
N
110
N
O
N
111
N
O
N
112
N
O
N
113
N
C
N
114
R
C
N
115
N
O
N
116
S
C
N
117
N
O
N
118
N
C
N
119
R
C
N
120
N
N
N
121
N
C
N
122
N
O
N
123
N
N
N
124
N
C
N
125
N
O
N
126
N
C
N
127
N
C
N
128
N
C
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
Y
24
N
sing
Y
25
N
sing
Y
26
N
doub
N
27
N
sing
Y
28
N
sing
Y
29
N
sing
Y
30
N
doub
N
31
N
sing
Y
32
N
doub
N
33
N
sing
N
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
doub
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
doub
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
sing
N
102
N
sing
Y
103
N
doub
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
GW
J.Biol.Inorg.Chem.
JJBCFA
2154
0949-8257
7
533
538
10.1007/s00775-001-0333-z
11941511
Interaction of zinc ions with d(CGCAATTGCG) in a 2.9 A resolution X-ray structure.
2002
10.2210/pdb1g6d/pdb
pdb_00001g6d
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
110
1
IMAGE PLATE
1998-08-06
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
1.1
1.0
X11
EMBL/DESY, HAMBURG
1.1
SYNCHROTRON
EMBL/DESY, HAMBURG BEAMLINE X11
3045.005
PEPTIDYL-D(CGCAATTGCG)
1
syn
polymer
65.409
ZINC ION
3
syn
non-polymer
18.015
water
39
nat
water
no
no
(DC)(DG)(DC)(DA)(DA)(DT)(DT)(DG)(DC)(DG)
CGCAATTGCG
A
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
1
2.58
52.34
VAPOR DIFFUSION, HANGING DROP
7
0.5 mM adduct, 10mM sodium cacodylate, 0.75 mM Zn acetate, 10% MPD, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
adduct
1
sodium cacodylate
1
Zn acetate
1
MPD
1
MPD
2
0.258
1
19
A
2
A
9
4.027
A_DG2:DC9_A
1
-0.174
-0.584
0.853
-0.397
8.014
1
19
A
3
A
8
-0.929
A_DC3:DG8_A
2
-0.075
0.526
0.075
-0.506
7.898
1
20
A
4
A
7
-0.709
A_DA4:DT7_A
3
-18.479
-0.129
0.246
-0.158
5.621
1
20
A
5
A
6
-2.840
A_DA5:DT6_A
4
-10.335
0.192
0.121
-0.156
-5.621
1
20
A
6
A
5
-2.840
A_DT6:DA5_A
5
-10.335
-0.192
0.121
-0.156
-7.898
1
20
A
7
A
4
-0.709
A_DT7:DA4_A
6
-18.479
0.129
0.246
-0.158
-8.014
1
19
A
8
A
3
-0.929
A_DG8:DC3_A
7
-0.075
-0.526
0.075
-0.506
-0.258
1
19
A
9
A
2
4.027
A_DC9:DG2_A
8
-0.174
0.584
0.853
-0.397
3.325
39.790
A
A
2
3
3.532
A
A
9
8
3.287
2.389
0.267
0.847
AA_DG2DC3:DG8DC9_AA
1
7.452
-11.016
39.043
0.961
0.490
3.279
31.877
A
A
3
4
2.777
A
A
8
7
3.232
1.523
-0.550
0.373
AA_DC3DA4:DT7DG8_AA
2
-2.619
4.775
31.737
0.403
0.526
3.455
43.359
A
A
4
5
-3.773
A
A
7
6
3.462
-2.786
-0.150
-0.004
AA_DA4DA5:DT6DT7_AA
3
0.247
-0.334
43.273
0.282
0.228
3.475
29.695
A
A
5
6
-3.723
A
A
6
5
3.401
-1.907
0.000
-1.289
AA_DA5DT6:DA5DT6_AA
4
0.000
0.000
29.635
-2.094
0.000
3.455
43.359
A
A
6
7
-3.773
A
A
5
4
3.462
-2.786
0.150
-0.004
AA_DT6DT7:DA4DA5_AA
5
-0.247
0.334
43.273
0.282
-0.228
3.279
31.877
A
A
7
8
2.777
A
A
4
3
3.232
1.523
0.550
0.373
AA_DT7DG8:DC3DA4_AA
6
2.619
-4.775
31.737
0.403
-0.526
3.325
39.790
A
A
8
9
3.532
A
A
3
2
3.287
2.389
-0.267
0.847
AA_DG8DC9:DG2DC3_AA
7
-7.452
11.016
39.043
0.961
-0.490
chem_comp_atom
chem_comp_bond
database_2
diffrn_source
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Atomic model
Data collection
Database references
Derived calculations
1
0
2002-04-19
1
1
2008-04-27
1
2
2011-07-13
1
3
2011-11-16
1
4
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_diffrn_source.pdbx_synchrotron_site
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_symmetry
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2000-11-04
REL
ZN
ZINC ION
HOH
water
phosphotriester method in solution
sample
ZN
11
2
ZN
ZN
11
A
ZN
12
2
ZN
ZN
12
A
ZN
13
2
ZN
ZN
13
A
HOH
12
3
HOH
HOH
14
A
HOH
13
3
HOH
HOH
15
A
HOH
14
3
HOH
HOH
16
A
HOH
15
3
HOH
HOH
17
A
HOH
16
3
HOH
HOH
18
A
HOH
17
3
HOH
HOH
19
A
HOH
18
3
HOH
HOH
20
A
HOH
19
3
HOH
HOH
21
A
HOH
20
3
HOH
HOH
22
A
HOH
21
3
HOH
HOH
23
A
HOH
114
3
HOH
HOH
24
A
HOH
115
3
HOH
HOH
25
A
HOH
116
3
HOH
HOH
26
A
HOH
117
3
HOH
HOH
27
A
HOH
118
3
HOH
HOH
28
A
HOH
119
3
HOH
HOH
29
A
HOH
120
3
HOH
HOH
30
A
HOH
121
3
HOH
HOH
31
A
HOH
122
3
HOH
HOH
32
A
HOH
123
3
HOH
HOH
33
A
HOH
124
3
HOH
HOH
34
A
HOH
125
3
HOH
HOH
35
A
HOH
126
3
HOH
HOH
36
A
HOH
127
3
HOH
HOH
37
A
HOH
128
3
HOH
HOH
38
A
HOH
129
3
HOH
HOH
39
A
HOH
130
3
HOH
HOH
40
A
HOH
131
3
HOH
HOH
41
A
HOH
132
3
HOH
HOH
42
A
HOH
133
3
HOH
HOH
43
A
HOH
134
3
HOH
HOH
44
A
HOH
135
3
HOH
HOH
45
A
HOH
136
3
HOH
HOH
46
A
HOH
137
3
HOH
HOH
47
A
HOH
138
3
HOH
HOH
48
A
HOH
139
3
HOH
HOH
49
A
HOH
140
3
HOH
HOH
50
A
HOH
141
3
HOH
HOH
51
A
HOH
142
3
HOH
HOH
52
A
C
1
n
1
DC
1
A
G
2
n
2
DG
2
A
C
3
n
3
DC
3
A
A
4
n
4
DA
4
A
A
5
n
5
DA
5
A
T
6
n
6
DT
6
A
T
7
n
7
DT
7
A
G
8
n
8
DG
8
A
C
9
n
9
DC
9
A
G
10
n
10
DG
10
A
author_defined_assembly
2
dimeric
A
DC
1
A
OP1
DC
1
1_555
A
ZN
11
B
ZN
ZN
1_555
A
DC
1
A
OP1
DC
1
3_655
121.4
A
DC
1
A
OP1
DC
1
1_555
A
ZN
11
B
ZN
ZN
1_555
A
DG
10
A
OP1
DG
10
6_565
127.9
A
DC
1
A
OP1
DC
1
3_655
A
ZN
11
B
ZN
ZN
1_555
A
DG
10
A
OP1
DG
10
6_565
98.3
A
DC
1
A
OP1
DC
1
1_555
A
ZN
11
B
ZN
ZN
1_555
A
DG
10
A
OP1
DG
10
8_565
98.2
A
DC
1
A
OP1
DC
1
3_655
A
ZN
11
B
ZN
ZN
1_555
A
DG
10
A
OP1
DG
10
8_565
128.1
A
DG
10
A
OP1
DG
10
6_565
A
ZN
11
B
ZN
ZN
1_555
A
DG
10
A
OP1
DG
10
8_565
78.3
A
DC
1
A
OP1
DC
1
1_555
A
ZN
11
B
ZN
ZN
1_555
A
HOH
25
E
O
HOH
1_555
70.3
A
DC
1
A
OP1
DC
1
3_655
A
ZN
11
B
ZN
ZN
1_555
A
HOH
25
E
O
HOH
1_555
109.1
A
DG
10
A
OP1
DG
10
6_565
A
ZN
11
B
ZN
ZN
1_555
A
HOH
25
E
O
HOH
1_555
65.3
A
DG
10
A
OP1
DG
10
8_565
A
ZN
11
B
ZN
ZN
1_555
A
HOH
25
E
O
HOH
1_555
115.6
A
DC
1
A
OP1
DC
1
1_555
A
ZN
11
B
ZN
ZN
1_555
A
HOH
25
E
O
HOH
3_655
109.0
A
DC
1
A
OP1
DC
1
3_655
A
ZN
11
B
ZN
ZN
1_555
A
HOH
25
E
O
HOH
3_655
70.5
A
DG
10
A
OP1
DG
10
6_565
A
ZN
11
B
ZN
ZN
1_555
A
HOH
25
E
O
HOH
3_655
115.7
A
DG
10
A
OP1
DG
10
8_565
A
ZN
11
B
ZN
ZN
1_555
A
HOH
25
E
O
HOH
3_655
65.3
A
HOH
25
E
O
HOH
1_555
A
ZN
11
B
ZN
ZN
1_555
A
HOH
25
E
O
HOH
3_655
178.9
A
DG
2
A
N7
DG
2
1_555
A
ZN
13
D
ZN
ZN
1_555
A
HOH
19
E
O
HOH
1_555
92.3
A
DG
2
A
N7
DG
2
1_555
A
ZN
13
D
ZN
ZN
1_555
A
HOH
20
E
O
HOH
1_555
87.8
A
HOH
19
E
O
HOH
1_555
A
ZN
13
D
ZN
ZN
1_555
A
HOH
20
E
O
HOH
1_555
179.9
A
DG
2
A
N7
DG
2
1_555
A
ZN
13
D
ZN
ZN
1_555
A
HOH
21
E
O
HOH
1_555
175.8
A
HOH
19
E
O
HOH
1_555
A
ZN
13
D
ZN
ZN
1_555
A
HOH
21
E
O
HOH
1_555
89.9
A
HOH
20
E
O
HOH
1_555
A
ZN
13
D
ZN
ZN
1_555
A
HOH
21
E
O
HOH
1_555
90.0
A
DG
2
A
N7
DG
2
1_555
A
ZN
13
D
ZN
ZN
1_555
A
HOH
22
E
O
HOH
1_555
93.5
A
HOH
19
E
O
HOH
1_555
A
ZN
13
D
ZN
ZN
1_555
A
HOH
22
E
O
HOH
1_555
90.0
A
HOH
20
E
O
HOH
1_555
A
ZN
13
D
ZN
ZN
1_555
A
HOH
22
E
O
HOH
1_555
90.0
A
HOH
21
E
O
HOH
1_555
A
ZN
13
D
ZN
ZN
1_555
A
HOH
22
E
O
HOH
1_555
90.0
A
DG
2
A
N7
DG
2
1_555
A
ZN
13
D
ZN
ZN
1_555
A
HOH
23
E
O
HOH
1_555
86.5
A
HOH
19
E
O
HOH
1_555
A
ZN
13
D
ZN
ZN
1_555
A
HOH
23
E
O
HOH
1_555
90.0
A
HOH
20
E
O
HOH
1_555
A
ZN
13
D
ZN
ZN
1_555
A
HOH
23
E
O
HOH
1_555
90.0
A
HOH
21
E
O
HOH
1_555
A
ZN
13
D
ZN
ZN
1_555
A
HOH
23
E
O
HOH
1_555
89.9
A
HOH
22
E
O
HOH
1_555
A
ZN
13
D
ZN
ZN
1_555
A
HOH
23
E
O
HOH
1_555
179.9
A
DG
10
A
N7
DG
10
1_555
A
ZN
12
C
ZN
ZN
1_555
A
HOH
14
E
O
HOH
1_555
92.1
A
DG
10
A
N7
DG
10
1_555
A
ZN
12
C
ZN
ZN
1_555
A
HOH
15
E
O
HOH
1_555
88.1
A
HOH
14
E
O
HOH
1_555
A
ZN
12
C
ZN
ZN
1_555
A
HOH
15
E
O
HOH
1_555
179.8
A
DG
10
A
N7
DG
10
1_555
A
ZN
12
C
ZN
ZN
1_555
A
HOH
16
E
O
HOH
1_555
176.8
A
HOH
14
E
O
HOH
1_555
A
ZN
12
C
ZN
ZN
1_555
A
HOH
16
E
O
HOH
1_555
89.8
A
HOH
15
E
O
HOH
1_555
A
ZN
12
C
ZN
ZN
1_555
A
HOH
16
E
O
HOH
1_555
90.0
A
DG
10
A
N7
DG
10
1_555
A
ZN
12
C
ZN
ZN
1_555
A
HOH
17
E
O
HOH
1_555
92.6
A
HOH
14
E
O
HOH
1_555
A
ZN
12
C
ZN
ZN
1_555
A
HOH
17
E
O
HOH
1_555
90.0
A
HOH
15
E
O
HOH
1_555
A
ZN
12
C
ZN
ZN
1_555
A
HOH
17
E
O
HOH
1_555
89.9
A
HOH
16
E
O
HOH
1_555
A
ZN
12
C
ZN
ZN
1_555
A
HOH
17
E
O
HOH
1_555
89.9
A
DG
10
A
N7
DG
10
1_555
A
ZN
12
C
ZN
ZN
1_555
A
HOH
18
E
O
HOH
1_555
87.5
A
HOH
14
E
O
HOH
1_555
A
ZN
12
C
ZN
ZN
1_555
A
HOH
18
E
O
HOH
1_555
90.0
A
HOH
15
E
O
HOH
1_555
A
ZN
12
C
ZN
ZN
1_555
A
HOH
18
E
O
HOH
1_555
90.1
A
HOH
16
E
O
HOH
1_555
A
ZN
12
C
ZN
ZN
1_555
A
HOH
18
E
O
HOH
1_555
90.0
A
HOH
17
E
O
HOH
1_555
A
ZN
12
C
ZN
ZN
1_555
A
HOH
18
E
O
HOH
1_555
179.9
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_565
x,-y+1,-z
crystal symmetry operation
0.0000000000
44.0900000000
0.0000000000
1
A
ZN
11
B
ZN
1
A
HOH
27
E
HOH
1
A
HOH
28
E
HOH
1
A
DG
2
0.066
SIDE CHAIN
1
A
DG
10
0.061
SIDE CHAIN
1
A
A
P
OP3
DC
DC
1
1
-0.080
0.012
1.607
1.527
N
The sequence of the peptidyl-DNA is CH3C0-RRRR-NH-(CH2)6-NH-p-d(CGCAATTGCG). The peptidyl segment was disordered and not visible in the electron density.
0.2134000
0.2083000
2.9
20
7251
770
1
0
MOLECULAR REPLACEMENT
2.9
20
39
248
3
206
0
0.00597
1.14044
2.9
20
1G6D
7251
830
2.0
0.1100000
1
10.4
2.664
94.6
phasing
AMoRE
refinement
X-PLOR
3.843
data reduction
DENZO
data scaling
SCALEPACK
STRUCTURE OF PEPTIDYL-D(CGCAATTGCG) IN THE PRESENCE OF ZINC IONS
1
N
N
2
N
N
2
N
N
2
N
N
3
N
N
metalc
2.188
A
DC
1
A
OP1
DC
1
1_555
A
ZN
11
B
ZN
ZN
1_555
metalc
2.184
A
DC
1
A
OP1
DC
1
3_655
A
ZN
11
B
ZN
ZN
1_555
metalc
2.168
A
DG
2
A
N7
DG
2
1_555
A
ZN
13
D
ZN
ZN
1_555
metalc
2.292
A
DG
10
A
OP1
DG
10
6_565
A
ZN
11
B
ZN
ZN
1_555
metalc
2.292
A
DG
10
A
OP1
DG
10
8_565
A
ZN
11
B
ZN
ZN
1_555
metalc
2.191
A
DG
10
A
N7
DG
10
1_555
A
ZN
12
C
ZN
ZN
1_555
metalc
2.103
A
ZN
11
B
ZN
ZN
1_555
A
HOH
25
E
O
HOH
1_555
metalc
2.100
A
ZN
11
B
ZN
ZN
1_555
A
HOH
25
E
O
HOH
3_655
metalc
2.102
A
ZN
12
C
ZN
ZN
1_555
A
HOH
14
E
O
HOH
1_555
metalc
2.098
A
ZN
12
C
ZN
ZN
1_555
A
HOH
15
E
O
HOH
1_555
metalc
2.101
A
ZN
12
C
ZN
ZN
1_555
A
HOH
16
E
O
HOH
1_555
metalc
2.101
A
ZN
12
C
ZN
ZN
1_555
A
HOH
17
E
O
HOH
1_555
metalc
2.097
A
ZN
12
C
ZN
ZN
1_555
A
HOH
18
E
O
HOH
1_555
metalc
2.101
A
ZN
13
D
ZN
ZN
1_555
A
HOH
19
E
O
HOH
1_555
metalc
2.101
A
ZN
13
D
ZN
ZN
1_555
A
HOH
20
E
O
HOH
1_555
metalc
2.102
A
ZN
13
D
ZN
ZN
1_555
A
HOH
21
E
O
HOH
1_555
metalc
2.098
A
ZN
13
D
ZN
ZN
1_555
A
HOH
22
E
O
HOH
1_555
metalc
2.101
A
ZN
13
D
ZN
ZN
1_555
A
HOH
23
E
O
HOH
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N1
DG
2
1_555
A
DC
9
A
N3
DC
9
4_565
hydrog
WATSON-CRICK
A
DG
2
A
N2
DG
2
1_555
A
DC
9
A
O2
DC
9
4_565
hydrog
WATSON-CRICK
A
DG
2
A
O6
DG
2
1_555
A
DC
9
A
N4
DC
9
4_565
hydrog
WATSON-CRICK
A
DC
3
A
N3
DC
3
1_555
A
DG
8
A
N1
DG
8
4_565
hydrog
WATSON-CRICK
A
DC
3
A
N4
DC
3
1_555
A
DG
8
A
O6
DG
8
4_565
hydrog
WATSON-CRICK
A
DC
3
A
O2
DC
3
1_555
A
DG
8
A
N2
DG
8
4_565
hydrog
WATSON-CRICK
A
DA
4
A
N1
DA
4
1_555
A
DT
7
A
N3
DT
7
4_565
hydrog
WATSON-CRICK
A
DA
4
A
N6
DA
4
1_555
A
DT
7
A
O4
DT
7
4_565
hydrog
WATSON-CRICK
A
DA
5
A
N1
DA
5
1_555
A
DT
6
A
N3
DT
6
4_565
hydrog
WATSON-CRICK
A
DA
5
A
N6
DA
5
1_555
A
DT
6
A
O4
DT
6
4_565
hydrog
WATSON-CRICK
A
DT
6
A
N3
DT
6
1_555
A
DA
5
A
N1
DA
5
4_565
hydrog
WATSON-CRICK
A
DT
6
A
O4
DT
6
1_555
A
DA
5
A
N6
DA
5
4_565
hydrog
WATSON-CRICK
A
DT
7
A
N3
DT
7
1_555
A
DA
4
A
N1
DA
4
4_565
hydrog
WATSON-CRICK
A
DT
7
A
O4
DT
7
1_555
A
DA
4
A
N6
DA
4
4_565
hydrog
WATSON-CRICK
A
DG
8
A
N1
DG
8
1_555
A
DC
3
A
N3
DC
3
4_565
hydrog
WATSON-CRICK
A
DG
8
A
N2
DG
8
1_555
A
DC
3
A
O2
DC
3
4_565
hydrog
WATSON-CRICK
A
DG
8
A
O6
DG
8
1_555
A
DC
3
A
N4
DC
3
4_565
hydrog
WATSON-CRICK
A
DC
9
A
N3
DC
9
1_555
A
DG
2
A
N1
DG
2
4_565
hydrog
WATSON-CRICK
A
DC
9
A
N4
DC
9
1_555
A
DG
2
A
O6
DG
2
4_565
hydrog
WATSON-CRICK
A
DC
9
A
O2
DC
9
1_555
A
DG
2
A
N2
DG
2
4_565
DNA
DNA, peptidyl-DNA complex, Zn ions
1G6D
PDB
1
1G6D
1
10
1G6D
1
10
1G6D
A
1
1
10
BINDING SITE FOR RESIDUE ZN A 11
A
ZN
11
Software
6
BINDING SITE FOR RESIDUE ZN A 12
A
ZN
12
Software
6
BINDING SITE FOR RESIDUE ZN A 13
A
ZN
13
Software
6
A
DC
1
A
DC
1
6
1_555
A
DC
1
A
DC
1
6
3_655
A
DG
10
A
DG
10
6
8_565
A
DG
10
A
DG
10
6
6_565
A
HOH
25
E
HOH
6
3_655
A
HOH
25
E
HOH
6
1_555
A
DG
10
A
DG
10
6
1_555
A
HOH
14
E
HOH
6
1_555
A
HOH
15
E
HOH
6
1_555
A
HOH
16
E
HOH
6
1_555
A
HOH
17
E
HOH
6
1_555
A
HOH
18
E
HOH
6
1_555
A
DG
2
A
DG
2
6
1_555
A
HOH
19
E
HOH
6
1_555
A
HOH
20
E
HOH
6
1_555
A
HOH
21
E
HOH
6
1_555
A
HOH
22
E
HOH
6
1_555
A
HOH
23
E
HOH
6
1_555
20
C 2 2 21