1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Liepinsh, E. Mkrtchian, S. Barishev, M. Sharipo, A. Ingelman-Sundberg, M. Otting, G. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Structure STRUE6 2005 0969-2126 9 457 471 10.1016/S0969-2126(01)00607-4 11435111 Thioredoxin fold as homodimerization module in the putative chaperone ERp29: NMR structures of the domains and experimental model of the 51 kDa dimer. 2001 10.2210/pdb1g7d/pdb pdb_00001g7d 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 11787.470 ENDOPLASMIC RETICULUM PROTEIN ERP29 C-TERMINAL DOMAIN 1 man polymer no no PGCLPAYDALAGQFIEASSREARQAILKQGQDGLSGVKETDKKWASQYLKIMGKILDQGEDFPASELARISKLIENKMSE GKKEELQRSLNILTAFRKKGAEKEEL PGCLPAYDALAGQFIEASSREARQAILKQGQDGLSGVKETDKKWASQYLKIMGKILDQGEDFPASELARISKLIENKMSE GKKEELQRSLNILTAFRKKGAEKEEL A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Norway rat Rattus Escherichia sample 10116 Rattus norvegicus 562 Escherichia coli JM109 PQE30 database_2 pdbx_nmr_software pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2000-11-29 1 1 2008-04-27 1 2 2011-07-13 1 3 2022-02-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name N-DOMAIN OF ERP29 PROTEIN RCSB Y RCSB 2000-11-10 REL The signal assignment was determined using triple-resonance NMR spectroscopy. The structure was determined using standard 2D homonuclear techniques. structures with the lowest energy,target function 50 20 HNCA, HNCO, HN(CO)CA 3D_15N-separated_NOESY 3D_13C-separated_NOESY 2D NOESY, 2D TOCSY, DQF COSY 3D HNHB .1 4.7 ambient 308 K .1 4.7 ambient 308 K The input for the final structure calculation of C-domain protein consisted of 1492 upper limit distance restraints and 340 measured HN-Ha, Ha-Hb, 15N-Hb coupling constants resulting in 328 dihedral angle restraints. torsion angle dynamics, molecular dynamics 1 lowest energy 2mM C-domain ERp29 U-15N,13C 90% H2O/10% D2O 2mM C-domain ERp29 90% H2O/10% D2O Bruker collection XwinNMR 1.5 Guentert processing PROSA 3.6 Bartels data analysis XEASY 970326 Guentert structure solution DYANA 1.5 Luginbul refinement OPAL 2.6 Koradi data analysis MOLMOL 2.6.0 600 Bruker DMX PRO 155 n 1 PRO 155 A GLY 156 n 2 GLY 156 A CYS 157 n 3 CYS 157 A LEU 158 n 4 LEU 158 A PRO 159 n 5 PRO 159 A ALA 160 n 6 ALA 160 A TYR 161 n 7 TYR 161 A ASP 162 n 8 ASP 162 A ALA 163 n 9 ALA 163 A LEU 164 n 10 LEU 164 A ALA 165 n 11 ALA 165 A GLY 166 n 12 GLY 166 A GLN 167 n 13 GLN 167 A PHE 168 n 14 PHE 168 A ILE 169 n 15 ILE 169 A GLU 170 n 16 GLU 170 A ALA 171 n 17 ALA 171 A SER 172 n 18 SER 172 A SER 173 n 19 SER 173 A ARG 174 n 20 ARG 174 A GLU 175 n 21 GLU 175 A ALA 176 n 22 ALA 176 A ARG 177 n 23 ARG 177 A GLN 178 n 24 GLN 178 A ALA 179 n 25 ALA 179 A ILE 180 n 26 ILE 180 A LEU 181 n 27 LEU 181 A LYS 182 n 28 LYS 182 A GLN 183 n 29 GLN 183 A GLY 184 n 30 GLY 184 A GLN 185 n 31 GLN 185 A ASP 186 n 32 ASP 186 A GLY 187 n 33 GLY 187 A LEU 188 n 34 LEU 188 A SER 189 n 35 SER 189 A GLY 190 n 36 GLY 190 A VAL 191 n 37 VAL 191 A LYS 192 n 38 LYS 192 A GLU 193 n 39 GLU 193 A THR 194 n 40 THR 194 A ASP 195 n 41 ASP 195 A LYS 196 n 42 LYS 196 A LYS 197 n 43 LYS 197 A TRP 198 n 44 TRP 198 A ALA 199 n 45 ALA 199 A SER 200 n 46 SER 200 A GLN 201 n 47 GLN 201 A TYR 202 n 48 TYR 202 A LEU 203 n 49 LEU 203 A LYS 204 n 50 LYS 204 A ILE 205 n 51 ILE 205 A MET 206 n 52 MET 206 A GLY 207 n 53 GLY 207 A LYS 208 n 54 LYS 208 A ILE 209 n 55 ILE 209 A LEU 210 n 56 LEU 210 A ASP 211 n 57 ASP 211 A GLN 212 n 58 GLN 212 A GLY 213 n 59 GLY 213 A GLU 214 n 60 GLU 214 A ASP 215 n 61 ASP 215 A PHE 216 n 62 PHE 216 A PRO 217 n 63 PRO 217 A ALA 218 n 64 ALA 218 A SER 219 n 65 SER 219 A GLU 220 n 66 GLU 220 A LEU 221 n 67 LEU 221 A ALA 222 n 68 ALA 222 A ARG 223 n 69 ARG 223 A ILE 224 n 70 ILE 224 A SER 225 n 71 SER 225 A LYS 226 n 72 LYS 226 A LEU 227 n 73 LEU 227 A ILE 228 n 74 ILE 228 A GLU 229 n 75 GLU 229 A ASN 230 n 76 ASN 230 A LYS 231 n 77 LYS 231 A MET 232 n 78 MET 232 A SER 233 n 79 SER 233 A GLU 234 n 80 GLU 234 A GLY 235 n 81 GLY 235 A LYS 236 n 82 LYS 236 A LYS 237 n 83 LYS 237 A GLU 238 n 84 GLU 238 A GLU 239 n 85 GLU 239 A LEU 240 n 86 LEU 240 A GLN 241 n 87 GLN 241 A ARG 242 n 88 ARG 242 A SER 243 n 89 SER 243 A LEU 244 n 90 LEU 244 A ASN 245 n 91 ASN 245 A ILE 246 n 92 ILE 246 A LEU 247 n 93 LEU 247 A THR 248 n 94 THR 248 A ALA 249 n 95 ALA 249 A PHE 250 n 96 PHE 250 A ARG 251 n 97 ARG 251 A LYS 252 n 98 LYS 252 A LYS 253 n 99 LYS 253 A GLY 254 n 100 GLY 254 A ALA 255 n 101 ALA 255 A GLU 256 n 102 GLU 256 A LYS 257 n 103 LYS 257 A GLU 258 n 104 GLU 258 A GLU 259 n 105 GLU 259 A LEU 260 n 106 LEU 260 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A A HG OE2 SER GLU 225 229 1.58 1 A A OD1 HG ASP SER 215 219 1.60 3 A A OD1 HG ASP SER 215 219 1.57 4 A A OD1 HG ASP SER 215 219 1.56 4 A A O HG ALA SER 222 225 1.57 7 A A OD1 HG ASP SER 215 219 1.58 8 A A OD1 HG ASP SER 215 219 1.57 9 A A OD1 HG ASP SER 215 219 1.55 10 A A HG OE2 SER GLU 243 258 1.58 11 A A HG OE2 SER GLU 225 229 1.58 12 A A OD1 HG ASP SER 215 219 1.58 14 A A O HG ALA SER 222 225 1.58 14 A A OD1 HG ASP SER 215 219 1.60 15 A A OD1 HG ASP SER 215 219 1.56 16 A A OD1 HG ASP SER 215 219 1.59 17 A A OD1 HG ASP SER 215 219 1.58 19 A A OD1 HG ASP SER 215 219 1.57 19 A A HG OE2 SER GLU 225 229 1.58 20 A A O HG ALA SER 222 225 1.55 20 A A OD1 HG ASP SER 215 219 1.58 2 A PHE 168 0.103 SIDE CHAIN 3 A ARG 242 0.081 SIDE CHAIN 3 A ARG 251 0.206 SIDE CHAIN 5 A ARG 223 0.115 SIDE CHAIN 5 A ARG 242 0.100 SIDE CHAIN 5 A ARG 251 0.078 SIDE CHAIN 6 A PHE 168 0.086 SIDE CHAIN 6 A PHE 216 0.117 SIDE CHAIN 6 A ARG 242 0.099 SIDE CHAIN 6 A ARG 251 0.234 SIDE CHAIN 7 A TYR 161 0.074 SIDE CHAIN 7 A ARG 251 0.188 SIDE CHAIN 8 A ASP 162 0.085 SIDE CHAIN 8 A ARG 223 0.185 SIDE CHAIN 9 A TYR 161 0.076 SIDE CHAIN 9 A ARG 177 0.119 SIDE CHAIN 9 A ARG 251 0.205 SIDE CHAIN 10 A ARG 177 0.100 SIDE CHAIN 10 A ARG 223 0.078 SIDE CHAIN 11 A ARG 177 0.088 SIDE CHAIN 11 A PHE 216 0.136 SIDE CHAIN 12 A ARG 177 0.080 SIDE CHAIN 13 A PHE 168 0.100 SIDE CHAIN 13 A ARG 177 0.088 SIDE CHAIN 13 A ASP 211 0.072 SIDE CHAIN 13 A PHE 216 0.116 SIDE CHAIN 14 A PHE 216 0.097 SIDE CHAIN 14 A ARG 251 0.121 SIDE CHAIN 16 A PHE 216 0.088 SIDE CHAIN 17 A ARG 174 0.099 SIDE CHAIN 17 A ARG 223 0.090 SIDE CHAIN 18 A ARG 177 0.076 SIDE CHAIN 18 A ASP 211 0.075 SIDE CHAIN 18 A PHE 216 0.103 SIDE CHAIN 18 A ARG 223 0.075 SIDE CHAIN 18 A ARG 242 0.076 SIDE CHAIN 19 A ASP 211 0.070 SIDE CHAIN 19 A ARG 242 0.079 SIDE CHAIN 20 A ARG 174 0.108 SIDE CHAIN 20 A PHE 216 0.080 SIDE CHAIN 20 A ARG 251 0.090 SIDE CHAIN 2 -6.24 0.70 120.80 114.56 A A A CB CG CD2 PHE PHE PHE 168 168 168 N 2 -3.89 0.60 121.00 117.11 A A A CB CG CD2 TYR TYR TYR 202 202 202 N 6 7.97 1.30 126.60 134.57 A A A CB CG CD2 TRP TRP TRP 198 198 198 N 6 12.57 2.00 110.40 122.97 A A A CB CA C LYS LYS LYS 252 252 252 N 7 -4.64 0.70 120.80 116.16 A A A CB CG CD2 PHE PHE PHE 168 168 168 N 8 -3.05 0.50 120.30 117.25 A A A NE CZ NH2 ARG ARG ARG 251 251 251 N 9 15.67 1.90 113.40 129.07 A A A CA CB CG TYR TYR TYR 202 202 202 N 11 12.45 2.00 110.40 122.85 A A A CB CA C GLU GLU GLU 220 220 220 N 12 8.06 1.30 126.60 134.66 A A A CB CG CD2 TRP TRP TRP 198 198 198 N 12 13.85 2.00 110.40 124.25 A A A CB CA C GLU GLU GLU 220 220 220 N 12 19.69 2.50 121.70 141.39 A A A C N CA GLY ALA ALA 254 255 255 Y 12 -14.05 1.40 110.10 96.05 A A A N CA CB ALA ALA ALA 255 255 255 N 14 -4.75 0.70 120.80 116.05 A A A CB CG CD2 PHE PHE PHE 168 168 168 N 14 14.35 2.00 110.40 124.75 A A A CB CA C LYS LYS LYS 252 252 252 N 15 8.82 1.40 123.60 132.42 A A A CD NE CZ ARG ARG ARG 242 242 242 N 16 -4.17 0.60 121.00 116.83 A A A CB CG CD2 TYR TYR TYR 161 161 161 N 20 3.18 0.50 120.30 123.48 A A A NE CZ NH1 ARG ARG ARG 251 251 251 N 20 -3.04 0.50 120.30 117.26 A A A NE CZ NH2 ARG ARG ARG 251 251 251 N 1 A THR 194 85.54 -31.92 1 A GLN 212 -118.11 -82.26 1 A GLU 234 -69.23 3.73 1 A PHE 250 -155.89 69.56 1 A LYS 252 -97.47 -71.72 1 A ALA 255 -66.85 33.05 2 A THR 194 75.34 -39.61 2 A GLN 212 -118.95 -93.66 2 A GLU 234 -68.61 3.51 2 A PHE 250 -153.19 27.03 2 A ARG 251 -61.64 92.01 2 A ALA 255 -33.60 98.71 2 A GLU 256 -58.89 -6.10 2 A GLU 258 -39.32 49.11 3 A THR 194 85.70 -33.82 3 A GLN 212 -106.85 -82.42 3 A GLU 234 -68.61 3.79 3 A LYS 236 -146.48 -6.72 3 A LYS 252 -97.58 -71.36 3 A ALA 255 -69.64 33.51 3 A LYS 257 -78.11 47.81 4 A ALA 171 -69.10 68.21 4 A THR 194 86.29 -39.72 4 A GLN 212 -123.62 -80.93 4 A GLU 234 -67.90 3.32 4 A LYS 236 -150.44 -26.13 4 A LYS 252 -97.37 -71.05 4 A ALA 255 -61.72 33.43 4 A LYS 257 -69.97 23.38 5 A THR 194 77.54 -32.33 5 A GLN 212 -121.47 -82.46 5 A LYS 231 -45.58 152.12 5 A GLU 234 -62.01 6.26 5 A LYS 236 -144.81 13.71 5 A ARG 251 -67.83 69.34 5 A LYS 252 -96.80 -71.26 5 A ALA 255 -69.55 32.82 5 A LYS 257 -58.98 23.99 6 A SER 172 -82.95 -76.12 6 A THR 194 82.31 -31.75 6 A GLN 212 -119.84 -81.01 6 A GLU 214 -68.20 0.81 6 A LYS 231 -49.81 151.04 6 A GLU 234 -67.68 3.70 6 A LYS 252 -97.32 -71.72 6 A ALA 255 -69.43 33.72 6 A LYS 257 -68.65 23.95 7 A THR 194 85.69 -42.01 7 A GLN 212 -119.99 -86.77 7 A LYS 231 -45.36 150.71 7 A GLU 234 -60.36 3.96 7 A LYS 236 -157.92 -11.72 7 A LYS 252 -97.39 -70.90 7 A ALA 255 -68.90 33.47 8 A THR 194 73.97 -25.11 8 A GLN 212 -122.77 -86.00 8 A LYS 231 -49.91 164.85 8 A LYS 236 -149.66 -19.94 8 A PHE 250 -150.65 66.47 8 A LYS 252 -97.01 -70.99 8 A LYS 253 -96.23 -66.01 8 A ALA 255 -70.39 34.43 9 A THR 194 82.37 -43.49 9 A GLN 212 -116.77 -80.93 9 A LYS 252 -97.49 -70.82 9 A ALA 255 -71.77 33.07 9 A LYS 257 -70.26 23.65 10 A THR 194 83.48 -33.17 10 A GLN 212 -121.15 -78.51 10 A PHE 250 -156.00 67.50 10 A LYS 252 -96.94 -72.00 10 A ALA 255 -70.00 33.40 10 A LYS 257 -61.98 26.36 11 A SER 172 -89.87 -75.89 11 A THR 194 69.78 -18.08 11 A GLN 212 -124.45 -80.55 11 A GLU 234 -68.51 3.33 11 A LYS 236 -147.05 -10.47 11 A LYS 252 -97.43 -71.72 11 A ALA 255 -72.40 33.94 11 A LYS 257 -71.39 23.60 12 A THR 194 78.21 -25.45 12 A GLN 212 -124.94 -77.73 12 A GLU 234 -80.19 37.77 12 A PHE 250 -150.33 73.06 12 A ARG 251 -68.26 83.96 12 A LYS 252 -97.24 -60.72 12 A ALA 255 -32.59 99.46 12 A GLU 256 -51.68 -6.56 13 A THR 194 86.01 -34.72 13 A GLN 212 -119.63 -92.74 13 A GLU 234 -68.07 3.78 13 A PHE 250 -152.64 72.24 13 A LYS 252 -97.93 -72.66 13 A ALA 255 -34.07 65.33 13 A LYS 257 -51.29 23.75 13 A GLU 259 -68.93 76.95 14 A SER 172 -82.59 -75.34 14 A THR 194 83.10 -39.90 14 A GLN 212 -113.93 -79.09 14 A GLU 234 -68.32 3.43 14 A LYS 236 -141.03 -11.83 14 A LYS 252 -97.52 -71.49 14 A ALA 255 -72.69 33.26 14 A LYS 257 -70.65 23.96 15 A THR 194 86.20 -42.40 15 A GLN 212 -119.04 -80.85 15 A GLU 234 -67.21 3.40 15 A LYS 236 -151.96 -14.05 15 A PHE 250 -145.18 48.18 15 A ALA 255 -33.92 100.89 15 A GLU 256 -58.86 -6.44 15 A GLU 258 -52.75 54.76 16 A THR 194 86.55 -31.86 16 A GLN 212 -126.66 -74.86 16 A GLU 234 -68.98 3.55 16 A LYS 252 -97.57 -71.71 16 A ALA 255 -68.65 33.26 16 A LYS 257 -78.76 49.95 17 A THR 194 84.40 -41.05 17 A GLN 212 -116.94 -92.73 17 A GLU 234 -66.16 3.99 17 A PHE 250 -150.40 69.68 17 A LYS 252 -97.13 -71.37 17 A ALA 255 -72.90 32.75 17 A GLU 258 -73.69 33.36 18 A THR 194 79.31 -29.64 18 A GLN 212 -115.91 -83.01 18 A LYS 236 -155.96 -26.19 18 A PHE 250 -155.37 77.36 18 A LYS 252 -97.70 -72.86 18 A ALA 255 -59.47 33.15 18 A GLU 258 -70.06 24.52 19 A THR 194 73.12 -24.11 19 A GLN 212 -127.18 -79.16 19 A GLU 234 -65.54 3.65 19 A ALA 255 -66.27 33.78 19 A LYS 257 -32.99 93.85 19 A GLU 258 -48.25 84.67 19 A GLU 259 -97.11 37.94 20 A SER 172 -80.06 -73.46 20 A THR 194 84.12 -32.87 20 A GLN 212 -112.00 -85.75 20 A GLU 234 -64.58 3.71 20 A LYS 252 -96.46 -71.41 20 A ALA 255 -67.04 33.78 20 A LYS 257 -62.56 23.27 20 A GLU 259 -78.73 47.50 NMR STRUCTURE OF ERP29 C-DOMAIN 1 N N A PRO 159 A PRO 5 HELX_P A ALA 171 A ALA 17 1 1 13 A SER 173 A SER 19 HELX_P A LEU 188 A LEU 34 1 2 16 A ASP 195 A ASP 41 HELX_P A GLN 212 A GLN 58 1 3 18 A GLU 214 A GLU 60 HELX_P A ASN 230 A ASN 76 1 4 17 A LYS 236 A LYS 82 HELX_P A PHE 250 A PHE 96 1 5 15 CHAPERONE alpha helical protein, CHAPERONE ERP29_RAT UNP 1 155 P52555 PGCLPAYDALAGQFIEASSREARQAILKQGQDGLSGVKETDKKWASQYLKIMGKILDQGEDFPASELARISKLIENKMSE GKKEELQRSLNILTAFRKKGAEKEEL 155 260 1G7D 155 260 P52555 A 1 1 106 1 P 1