0.008222
0.000000
0.003590
0.000000
0.016932
0.000000
0.000000
0.000000
0.019534
0.00000
0.00000
0.00000
Sundberg, E.J.
Urrutia, M.
Braden, B.C.
Isern, J.
Mariuzza, R.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
113.59
90.00
121.63
59.06
55.86
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
39
15375
15387
10.1021/bi000704l
11112523
Estimation of the hydrophobic effect in an antigen-antibody protein-protein interface.
2000
10.2210/pdb1g7l/pdb
pdb_00001g7l
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
IMAGE PLATE
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
SIEMENS
11601.845
ANTI-HEN EGG WHITE LYSOZYME MONOCLONAL ANTIBODY D1.3
LIGHT CHAIN
W92S
1
man
polymer
12857.275
ANTI-HEN EGG WHITE LYSOZYME MONOCLONAL ANTIBODY D1.3
HEAVY CHAIN
1
man
polymer
14331.160
LYSOZYME C
3.2.1.17
1
nat
polymer
18.015
water
217
nat
water
no
no
DIVLTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYYTTTLADGVPSRFSGSGSGTQYSLKINSLQP
EDFGSYYCQHFSSTPRTFGGGTKLEIK
DIVLTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYYTTTLADGVPSRFSGSGSGTQYSLKINSLQP
EDFGSYYCQHFSSTPRTFGGGTKLEIK
A
polypeptide(L)
no
no
QVQLQESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFL
KMNSLHTDDTARYYCARERDYRLDYWGQGTTLTVSS
QVQLQESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFL
KMNSLHTDDTARYYCARERDYRLDYWGQGTTLTVSS
B
polypeptide(L)
no
no
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC
SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC
SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
C
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
Escherichia
sample
10090
Mus musculus
562
Escherichia coli
house mouse
Mus
Escherichia
sample
10090
Mus musculus
562
Escherichia coli
chicken
Gallus
sample
9031
Gallus gallus
1
2.37
48.09
VAPOR DIFFUSION, HANGING DROP
6.5
15-18% poly(ethylene glycol) 8000; 0.1 M potassium phosphate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
software
database_2
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Refinement description
Database references
1
0
2000-11-22
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-10-04
1
4
2021-10-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
D1.3-HEL wild type complex
D1.3-HEL VlW92A mutant
D1.3-HEL VlW92F mutant
D1.3-HEL VlW92H mutant
D1.3-HEL VlW92V mutant
RCSB
Y
RCSB
2000-11-10
REL
REL
HOH
water
WAT
2
4
HOH
HOH
108
A
WAT
5
4
HOH
HOH
109
A
WAT
7
4
HOH
HOH
110
A
WAT
9
4
HOH
HOH
111
A
WAT
12
4
HOH
HOH
112
A
WAT
14
4
HOH
HOH
113
A
WAT
20
4
HOH
HOH
114
A
WAT
24
4
HOH
HOH
115
A
WAT
30
4
HOH
HOH
116
A
WAT
36
4
HOH
HOH
117
A
WAT
37
4
HOH
HOH
118
A
WAT
38
4
HOH
HOH
119
A
WAT
40
4
HOH
HOH
120
A
WAT
41
4
HOH
HOH
121
A
WAT
43
4
HOH
HOH
122
A
WAT
44
4
HOH
HOH
123
A
WAT
45
4
HOH
HOH
124
A
WAT
47
4
HOH
HOH
125
A
WAT
48
4
HOH
HOH
126
A
WAT
49
4
HOH
HOH
127
A
WAT
51
4
HOH
HOH
128
A
WAT
52
4
HOH
HOH
129
A
WAT
53
4
HOH
HOH
130
A
WAT
58
4
HOH
HOH
131
A
WAT
61
4
HOH
HOH
132
A
WAT
65
4
HOH
HOH
133
A
WAT
66
4
HOH
HOH
134
A
WAT
67
4
HOH
HOH
135
A
WAT
76
4
HOH
HOH
136
A
WAT
79
4
HOH
HOH
137
A
WAT
80
4
HOH
HOH
138
A
WAT
81
4
HOH
HOH
139
A
WAT
83
4
HOH
HOH
140
A
WAT
93
4
HOH
HOH
141
A
WAT
97
4
HOH
HOH
142
A
WAT
99
4
HOH
HOH
143
A
WAT
100
4
HOH
HOH
144
A
WAT
102
4
HOH
HOH
145
A
WAT
104
4
HOH
HOH
146
A
WAT
107
4
HOH
HOH
147
A
WAT
108
4
HOH
HOH
148
A
WAT
109
4
HOH
HOH
149
A
WAT
112
4
HOH
HOH
150
A
WAT
113
4
HOH
HOH
151
A
WAT
114
4
HOH
HOH
152
A
WAT
115
4
HOH
HOH
153
A
WAT
118
4
HOH
HOH
154
A
WAT
121
4
HOH
HOH
155
A
WAT
125
4
HOH
HOH
156
A
WAT
126
4
HOH
HOH
157
A
WAT
128
4
HOH
HOH
158
A
WAT
130
4
HOH
HOH
159
A
WAT
132
4
HOH
HOH
160
A
WAT
135
4
HOH
HOH
161
A
WAT
139
4
HOH
HOH
162
A
WAT
141
4
HOH
HOH
163
A
WAT
142
4
HOH
HOH
164
A
WAT
147
4
HOH
HOH
165
A
WAT
148
4
HOH
HOH
166
A
WAT
152
4
HOH
HOH
167
A
WAT
157
4
HOH
HOH
168
A
WAT
158
4
HOH
HOH
169
A
WAT
161
4
HOH
HOH
170
A
WAT
163
4
HOH
HOH
171
A
WAT
166
4
HOH
HOH
172
A
WAT
167
4
HOH
HOH
173
A
WAT
169
4
HOH
HOH
174
A
WAT
170
4
HOH
HOH
175
A
WAT
173
4
HOH
HOH
176
A
WAT
174
4
HOH
HOH
177
A
WAT
176
4
HOH
HOH
178
A
WAT
177
4
HOH
HOH
179
A
WAT
180
4
HOH
HOH
180
A
WAT
183
4
HOH
HOH
181
A
WAT
185
4
HOH
HOH
182
A
WAT
186
4
HOH
HOH
183
A
WAT
192
4
HOH
HOH
184
A
WAT
193
4
HOH
HOH
185
A
WAT
196
4
HOH
HOH
186
A
WAT
202
4
HOH
HOH
187
A
WAT
210
4
HOH
HOH
188
A
WAT
213
4
HOH
HOH
189
A
WAT
3
4
HOH
HOH
117
B
WAT
6
4
HOH
HOH
118
B
WAT
8
4
HOH
HOH
119
B
WAT
10
4
HOH
HOH
120
B
WAT
11
4
HOH
HOH
121
B
WAT
13
4
HOH
HOH
122
B
WAT
16
4
HOH
HOH
123
B
WAT
19
4
HOH
HOH
124
B
WAT
21
4
HOH
HOH
125
B
WAT
22
4
HOH
HOH
126
B
WAT
23
4
HOH
HOH
127
B
WAT
25
4
HOH
HOH
128
B
WAT
26
4
HOH
HOH
129
B
WAT
31
4
HOH
HOH
130
B
WAT
32
4
HOH
HOH
131
B
WAT
39
4
HOH
HOH
132
B
WAT
42
4
HOH
HOH
133
B
WAT
50
4
HOH
HOH
134
B
WAT
55
4
HOH
HOH
135
B
WAT
57
4
HOH
HOH
136
B
WAT
62
4
HOH
HOH
137
B
WAT
69
4
HOH
HOH
138
B
WAT
71
4
HOH
HOH
139
B
WAT
72
4
HOH
HOH
140
B
WAT
74
4
HOH
HOH
141
B
WAT
75
4
HOH
HOH
142
B
WAT
82
4
HOH
HOH
143
B
WAT
87
4
HOH
HOH
144
B
WAT
94
4
HOH
HOH
145
B
WAT
98
4
HOH
HOH
146
B
WAT
106
4
HOH
HOH
147
B
WAT
116
4
HOH
HOH
148
B
WAT
119
4
HOH
HOH
149
B
WAT
122
4
HOH
HOH
150
B
WAT
143
4
HOH
HOH
151
B
WAT
145
4
HOH
HOH
152
B
WAT
146
4
HOH
HOH
153
B
WAT
153
4
HOH
HOH
154
B
WAT
159
4
HOH
HOH
155
B
WAT
160
4
HOH
HOH
156
B
WAT
162
4
HOH
HOH
157
B
WAT
164
4
HOH
HOH
158
B
WAT
165
4
HOH
HOH
159
B
WAT
171
4
HOH
HOH
160
B
WAT
175
4
HOH
HOH
161
B
WAT
179
4
HOH
HOH
162
B
WAT
182
4
HOH
HOH
163
B
WAT
184
4
HOH
HOH
164
B
WAT
188
4
HOH
HOH
165
B
WAT
190
4
HOH
HOH
166
B
WAT
191
4
HOH
HOH
167
B
WAT
195
4
HOH
HOH
168
B
WAT
198
4
HOH
HOH
169
B
WAT
199
4
HOH
HOH
170
B
WAT
200
4
HOH
HOH
171
B
WAT
204
4
HOH
HOH
172
B
WAT
205
4
HOH
HOH
173
B
WAT
206
4
HOH
HOH
174
B
WAT
209
4
HOH
HOH
175
B
WAT
212
4
HOH
HOH
176
B
WAT
1
4
HOH
HOH
130
C
WAT
4
4
HOH
HOH
131
C
WAT
15
4
HOH
HOH
132
C
WAT
17
4
HOH
HOH
133
C
WAT
18
4
HOH
HOH
134
C
WAT
27
4
HOH
HOH
135
C
WAT
28
4
HOH
HOH
136
C
WAT
29
4
HOH
HOH
137
C
WAT
33
4
HOH
HOH
138
C
WAT
34
4
HOH
HOH
139
C
WAT
35
4
HOH
HOH
140
C
WAT
46
4
HOH
HOH
141
C
WAT
54
4
HOH
HOH
142
C
WAT
56
4
HOH
HOH
143
C
WAT
59
4
HOH
HOH
144
C
WAT
60
4
HOH
HOH
145
C
WAT
63
4
HOH
HOH
146
C
WAT
64
4
HOH
HOH
147
C
WAT
68
4
HOH
HOH
148
C
WAT
70
4
HOH
HOH
149
C
WAT
73
4
HOH
HOH
150
C
WAT
77
4
HOH
HOH
151
C
WAT
78
4
HOH
HOH
152
C
WAT
84
4
HOH
HOH
153
C
WAT
85
4
HOH
HOH
154
C
WAT
86
4
HOH
HOH
155
C
WAT
88
4
HOH
HOH
156
C
WAT
89
4
HOH
HOH
157
C
WAT
90
4
HOH
HOH
158
C
WAT
91
4
HOH
HOH
159
C
WAT
92
4
HOH
HOH
160
C
WAT
95
4
HOH
HOH
161
C
WAT
96
4
HOH
HOH
162
C
WAT
101
4
HOH
HOH
163
C
WAT
103
4
HOH
HOH
164
C
WAT
105
4
HOH
HOH
165
C
WAT
110
4
HOH
HOH
166
C
WAT
111
4
HOH
HOH
167
C
WAT
117
4
HOH
HOH
168
C
WAT
120
4
HOH
HOH
169
C
WAT
123
4
HOH
HOH
170
C
WAT
124
4
HOH
HOH
171
C
WAT
127
4
HOH
HOH
172
C
WAT
129
4
HOH
HOH
173
C
WAT
131
4
HOH
HOH
174
C
WAT
133
4
HOH
HOH
175
C
WAT
134
4
HOH
HOH
176
C
WAT
136
4
HOH
HOH
177
C
WAT
137
4
HOH
HOH
178
C
WAT
138
4
HOH
HOH
179
C
WAT
140
4
HOH
HOH
180
C
WAT
144
4
HOH
HOH
181
C
WAT
149
4
HOH
HOH
182
C
WAT
150
4
HOH
HOH
183
C
WAT
151
4
HOH
HOH
184
C
WAT
154
4
HOH
HOH
185
C
WAT
155
4
HOH
HOH
186
C
WAT
156
4
HOH
HOH
187
C
WAT
168
4
HOH
HOH
188
C
WAT
172
4
HOH
HOH
189
C
WAT
178
4
HOH
HOH
190
C
WAT
181
4
HOH
HOH
191
C
WAT
187
4
HOH
HOH
192
C
WAT
189
4
HOH
HOH
193
C
WAT
194
4
HOH
HOH
194
C
WAT
197
4
HOH
HOH
195
C
WAT
201
4
HOH
HOH
196
C
WAT
203
4
HOH
HOH
197
C
WAT
207
4
HOH
HOH
198
C
WAT
208
4
HOH
HOH
199
C
WAT
211
4
HOH
HOH
200
C
WAT
214
4
HOH
HOH
201
C
WAT
215
4
HOH
HOH
202
C
WAT
216
4
HOH
HOH
203
C
WAT
217
4
HOH
HOH
204
C
ASP
1
n
1
ASP
1
A
ILE
2
n
2
ILE
2
A
VAL
3
n
3
VAL
3
A
LEU
4
n
4
LEU
4
A
THR
5
n
5
THR
5
A
GLN
6
n
6
GLN
6
A
SER
7
n
7
SER
7
A
PRO
8
n
8
PRO
8
A
ALA
9
n
9
ALA
9
A
SER
10
n
10
SER
10
A
LEU
11
n
11
LEU
11
A
SER
12
n
12
SER
12
A
ALA
13
n
13
ALA
13
A
SER
14
n
14
SER
14
A
VAL
15
n
15
VAL
15
A
GLY
16
n
16
GLY
16
A
GLU
17
n
17
GLU
17
A
THR
18
n
18
THR
18
A
VAL
19
n
19
VAL
19
A
THR
20
n
20
THR
20
A
ILE
21
n
21
ILE
21
A
THR
22
n
22
THR
22
A
CYS
23
n
23
CYS
23
A
ARG
24
n
24
ARG
24
A
ALA
25
n
25
ALA
25
A
SER
26
n
26
SER
26
A
GLY
27
n
27
GLY
27
A
ASN
28
n
28
ASN
28
A
ILE
29
n
29
ILE
29
A
HIS
30
n
30
HIS
30
A
ASN
31
n
31
ASN
31
A
TYR
32
n
32
TYR
32
A
LEU
33
n
33
LEU
33
A
ALA
34
n
34
ALA
34
A
TRP
35
n
35
TRP
35
A
TYR
36
n
36
TYR
36
A
GLN
37
n
37
GLN
37
A
GLN
38
n
38
GLN
38
A
LYS
39
n
39
LYS
39
A
ALA
40
n
40
GLN
40
A
GLY
41
n
41
GLY
41
A
LYS
42
n
42
LYS
42
A
SER
43
n
43
SER
43
A
PRO
44
n
44
PRO
44
A
GLN
45
n
45
GLN
45
A
LEU
46
n
46
LEU
46
A
LEU
47
n
47
LEU
47
A
VAL
48
n
48
VAL
48
A
TYR
49
n
49
TYR
49
A
TYR
50
n
50
TYR
50
A
THR
51
n
51
THR
51
A
THR
52
n
52
THR
52
A
THR
53
n
53
THR
53
A
LEU
54
n
54
LEU
54
A
ALA
55
n
55
ALA
55
A
ASP
56
n
56
ASP
56
A
GLY
57
n
57
GLY
57
A
VAL
58
n
58
VAL
58
A
PRO
59
n
59
PRO
59
A
SER
60
n
60
SER
60
A
ARG
61
n
61
ARG
61
A
PHE
62
n
62
PHE
62
A
SER
63
n
63
SER
63
A
GLY
64
n
64
GLY
64
A
SER
65
n
65
SER
65
A
GLY
66
n
66
GLY
66
A
SER
67
n
67
SER
67
A
GLY
68
n
68
GLY
68
A
THR
69
n
69
THR
69
A
GLN
70
n
70
GLN
70
A
TYR
71
n
71
TYR
71
A
SER
72
n
72
SER
72
A
LEU
73
n
73
LEU
73
A
LYS
74
n
74
LYS
74
A
ILE
75
n
75
ILE
75
A
ASN
76
n
76
ASN
76
A
SER
77
n
77
SER
77
A
LEU
78
n
78
LEU
78
A
GLN
79
n
79
GLN
79
A
PRO
80
n
80
PRO
80
A
GLU
81
n
81
GLU
81
A
ASP
82
n
82
ASP
82
A
PHE
83
n
83
PHE
83
A
GLY
84
n
84
GLY
84
A
SER
85
n
85
SER
85
A
TYR
86
n
86
TYR
86
A
TYR
87
n
87
TYR
87
A
CYS
88
n
88
CYS
88
A
GLN
89
n
89
GLN
89
A
HIS
90
n
90
HIS
90
A
PHE
91
n
91
PHE
91
A
SER
92
n
92
SER
92
A
SER
93
n
93
SER
93
A
THR
94
n
94
THR
94
A
PRO
95
n
95
PRO
95
A
ARG
96
n
96
ARG
96
A
THR
97
n
97
THR
97
A
PHE
98
n
98
PHE
98
A
GLY
99
n
99
GLY
99
A
GLY
100
n
100
GLY
100
A
GLY
101
n
101
GLY
101
A
THR
102
n
102
THR
102
A
ALA
103
n
103
LYS
103
A
LEU
104
n
104
LEU
104
A
GLU
105
n
105
GLU
105
A
ILE
106
n
106
ILE
106
A
LYS
107
n
107
LYS
107
A
GLN
1
n
1
GLN
1
B
VAL
2
n
2
VAL
2
B
GLN
3
n
3
GLN
3
B
LEU
4
n
4
LEU
4
B
GLN
5
n
5
GLN
5
B
GLU
6
n
6
GLU
6
B
SER
7
n
7
SER
7
B
GLY
8
n
8
GLY
8
B
PRO
9
n
9
PRO
9
B
GLY
10
n
10
GLY
10
B
ALA
11
n
11
LEU
11
B
ALA
12
n
12
VAL
12
B
n
13
13
B
n
14
14
B
n
15
15
B
n
16
16
B
ALA
17
n
17
SER
17
B
LEU
18
n
18
LEU
18
B
ALA
19
n
19
SER
19
B
ILE
20
n
20
ILE
20
B
THR
21
n
21
THR
21
B
CYS
22
n
22
CYS
22
B
THR
23
n
23
THR
23
B
VAL
24
n
24
VAL
24
B
SER
25
n
25
SER
25
B
GLY
26
n
26
GLY
26
B
PHE
27
n
27
PHE
27
B
SER
28
n
28
SER
28
B
LEU
29
n
29
LEU
29
B
THR
30
n
30
THR
30
B
GLY
31
n
31
GLY
31
B
TYR
32
n
32
TYR
32
B
GLY
33
n
33
GLY
33
B
VAL
34
n
34
VAL
34
B
ASN
35
n
35
ASN
35
B
TRP
36
n
36
TRP
36
B
VAL
37
n
37
VAL
37
B
ARG
38
n
38
ARG
38
B
GLN
39
n
39
GLN
39
B
PRO
40
n
40
PRO
40
B
PRO
41
n
41
PRO
41
B
GLY
42
n
42
GLY
42
B
LYS
43
n
43
LYS
43
B
GLY
44
n
44
GLY
44
B
LEU
45
n
45
LEU
45
B
GLU
46
n
46
GLU
46
B
TRP
47
n
47
TRP
47
B
LEU
48
n
48
LEU
48
B
GLY
49
n
49
GLY
49
B
MET
50
n
50
MET
50
B
ILE
51
n
51
ILE
51
B
TRP
52
n
52
TRP
52
B
GLY
53
n
53
GLY
53
B
ASP
54
n
54
ASP
54
B
GLY
55
n
55
GLY
55
B
ASN
56
n
56
ASN
56
B
THR
57
n
57
THR
57
B
ASP
58
n
58
ASP
58
B
TYR
59
n
59
TYR
59
B
ASN
60
n
60
ASN
60
B
SER
61
n
61
SER
61
B
ALA
62
n
62
ALA
62
B
LEU
63
n
63
LEU
63
B
LYS
64
n
64
LYS
64
B
SER
65
n
65
SER
65
B
ARG
66
n
66
ARG
66
B
LEU
67
n
67
LEU
67
B
SER
68
n
68
SER
68
B
ILE
69
n
69
ILE
69
B
SER
70
n
70
SER
70
B
LYS
71
n
71
LYS
71
B
ASP
72
n
72
ASP
72
B
ASN
73
n
73
ASN
73
B
SER
74
n
74
SER
74
B
LYS
75
n
75
LYS
75
B
SER
76
n
76
SER
76
B
GLN
77
n
77
GLN
77
B
VAL
78
n
78
VAL
78
B
PHE
79
n
79
PHE
79
B
LEU
80
n
80
LEU
80
B
LYS
81
n
81
LYS
81
B
MET
82
n
82
MET
82
B
ASN
83
n
83
ASN
83
B
SER
84
n
84
SER
84
B
LEU
85
n
85
LEU
85
B
HIS
86
n
86
HIS
86
B
THR
87
n
87
THR
87
B
ASP
88
n
88
ASP
88
B
ASP
89
n
89
ASP
89
B
THR
90
n
90
THR
90
B
ALA
91
n
91
ALA
91
B
ARG
92
n
92
ARG
92
B
TYR
93
n
93
TYR
93
B
TYR
94
n
94
TYR
94
B
CYS
95
n
95
CYS
95
B
ALA
96
n
96
ALA
96
B
ARG
97
n
97
ARG
97
B
GLU
98
n
98
GLU
98
B
ARG
99
n
99
ARG
99
B
ASP
100
n
100
ASP
100
B
TYR
101
n
101
TYR
101
B
ARG
102
n
102
ARG
102
B
LEU
103
n
103
LEU
103
B
ASP
104
n
104
ASP
104
B
TYR
105
n
105
TYR
105
B
TRP
106
n
106
TRP
106
B
GLY
107
n
107
GLY
107
B
ALA
108
n
108
GLN
108
B
GLY
109
n
109
GLY
109
B
THR
110
n
110
THR
110
B
THR
111
n
111
THR
111
B
LEU
112
n
112
LEU
112
B
THR
113
n
113
THR
113
B
VAL
114
n
114
VAL
114
B
n
115
115
B
n
116
116
B
LYS
1
n
1
LYS
1
C
VAL
2
n
2
VAL
2
C
PHE
3
n
3
PHE
3
C
GLY
4
n
4
GLY
4
C
ARG
5
n
5
ARG
5
C
CYS
6
n
6
CYS
6
C
GLU
7
n
7
GLU
7
C
LEU
8
n
8
LEU
8
C
ALA
9
n
9
ALA
9
C
ALA
10
n
10
ALA
10
C
ALA
11
n
11
ALA
11
C
MET
12
n
12
MET
12
C
LYS
13
n
13
LYS
13
C
ARG
14
n
14
ARG
14
C
HIS
15
n
15
HIS
15
C
GLY
16
n
16
GLY
16
C
LEU
17
n
17
LEU
17
C
ASP
18
n
18
ASP
18
C
ASN
19
n
19
ASN
19
C
TYR
20
n
20
TYR
20
C
ARG
21
n
21
ARG
21
C
GLY
22
n
22
GLY
22
C
TYR
23
n
23
TYR
23
C
SER
24
n
24
SER
24
C
LEU
25
n
25
LEU
25
C
GLY
26
n
26
GLY
26
C
ASN
27
n
27
ASN
27
C
TRP
28
n
28
TRP
28
C
VAL
29
n
29
VAL
29
C
CYS
30
n
30
CYS
30
C
ALA
31
n
31
ALA
31
C
ALA
32
n
32
ALA
32
C
LYS
33
n
33
LYS
33
C
PHE
34
n
34
PHE
34
C
GLU
35
n
35
GLU
35
C
SER
36
n
36
SER
36
C
ASN
37
n
37
ASN
37
C
PHE
38
n
38
PHE
38
C
ASN
39
n
39
ASN
39
C
THR
40
n
40
THR
40
C
GLN
41
n
41
GLN
41
C
ALA
42
n
42
ALA
42
C
THR
43
n
43
THR
43
C
ASN
44
n
44
ASN
44
C
ALA
45
n
45
ARG
45
C
ASN
46
n
46
ASN
46
C
THR
47
n
47
THR
47
C
ASP
48
n
48
ASP
48
C
GLY
49
n
49
GLY
49
C
SER
50
n
50
SER
50
C
THR
51
n
51
THR
51
C
ASP
52
n
52
ASP
52
C
TYR
53
n
53
TYR
53
C
GLY
54
n
54
GLY
54
C
ILE
55
n
55
ILE
55
C
LEU
56
n
56
LEU
56
C
GLN
57
n
57
GLN
57
C
ILE
58
n
58
ILE
58
C
ASN
59
n
59
ASN
59
C
SER
60
n
60
SER
60
C
ARG
61
n
61
ARG
61
C
TRP
62
n
62
TRP
62
C
TRP
63
n
63
TRP
63
C
CYS
64
n
64
CYS
64
C
ASN
65
n
65
ASN
65
C
ASP
66
n
66
ASP
66
C
GLY
67
n
67
GLY
67
C
ALA
68
n
68
ARG
68
C
THR
69
n
69
THR
69
C
PRO
70
n
70
PRO
70
C
GLY
71
n
71
GLY
71
C
SER
72
n
72
SER
72
C
ARG
73
n
73
ARG
73
C
ASN
74
n
74
ASN
74
C
LEU
75
n
75
LEU
75
C
CYS
76
n
76
CYS
76
C
ASN
77
n
77
ASN
77
C
ILE
78
n
78
ILE
78
C
PRO
79
n
79
PRO
79
C
CYS
80
n
80
CYS
80
C
SER
81
n
81
SER
81
C
ALA
82
n
82
ALA
82
C
LEU
83
n
83
LEU
83
C
LEU
84
n
84
LEU
84
C
SER
85
n
85
SER
85
C
SER
86
n
86
SER
86
C
ASP
87
n
87
ASP
87
C
ILE
88
n
88
ILE
88
C
THR
89
n
89
THR
89
C
ALA
90
n
90
ALA
90
C
SER
91
n
91
SER
91
C
VAL
92
n
92
VAL
92
C
ASN
93
n
93
ASN
93
C
CYS
94
n
94
CYS
94
C
ALA
95
n
95
ALA
95
C
LYS
96
n
96
LYS
96
C
LYS
97
n
97
LYS
97
C
ILE
98
n
98
ILE
98
C
VAL
99
n
99
VAL
99
C
SER
100
n
100
SER
100
C
ASP
101
n
101
ASP
101
C
GLY
102
n
102
GLY
102
C
ASN
103
n
103
ASN
103
C
GLY
104
n
104
GLY
104
C
MET
105
n
105
MET
105
C
ASN
106
n
106
ASN
106
C
ALA
107
n
107
ALA
107
C
TRP
108
n
108
TRP
108
C
VAL
109
n
109
VAL
109
C
ALA
110
n
110
ALA
110
C
TRP
111
n
111
TRP
111
C
ARG
112
n
112
ARG
112
C
ASN
113
n
113
ASN
113
C
ARG
114
n
114
ARG
114
C
CYS
115
n
115
CYS
115
C
LYS
116
n
116
LYS
116
C
GLY
117
n
117
GLY
117
C
THR
118
n
118
THR
118
C
ASP
119
n
119
ASP
119
C
VAL
120
n
120
VAL
120
C
GLN
121
n
121
GLN
121
C
ALA
122
n
122
ALA
122
C
TRP
123
n
123
TRP
123
C
ILE
124
n
124
ILE
124
C
ARG
125
n
125
ARG
125
C
GLY
126
n
126
GLY
126
C
CYS
127
n
127
CYS
127
C
ALA
128
n
128
ARG
128
C
LEU
129
n
129
LEU
129
C
author_defined_assembly
3
trimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
SER
7
A
O
SER
7
A
N
THR
22
A
N
THR
22
A
N
CYS
23
A
N
CYS
23
A
O
TYR
71
A
O
TYR
71
A
N
LYS
74
A
N
LYS
74
A
O
SER
63
A
O
SER
63
A
N
LEU
11
A
N
LEU
11
A
O
LYS
103
A
O
LYS
103
A
N
LEU
104
A
N
LEU
104
A
O
GLY
84
A
O
GLY
84
A
O
GLN
89
A
O
GLN
89
A
N
ALA
34
A
N
ALA
34
A
O
GLN
37
A
O
GLN
37
A
N
GLN
45
A
N
GLN
45
A
N
TYR
49
A
N
TYR
49
A
O
THR
53
A
O
THR
53
B
O
SER
7
B
O
SER
7
B
N
THR
21
B
N
THR
21
B
N
CYS
22
B
N
CYS
22
B
O
VAL
78
B
O
VAL
78
B
O
LYS
81
B
O
LYS
81
B
N
SER
68
B
N
SER
68
B
O
ASP
58
B
O
ASP
58
B
N
MET
50
B
N
MET
50
B
O
ILE
51
B
O
ILE
51
B
N
VAL
34
B
N
VAL
34
B
O
GLN
39
B
O
GLN
39
B
N
ARG
92
B
N
ARG
92
B
O
ARG
97
B
O
ARG
97
B
N
ASP
104
B
N
ASP
104
B
O
ASP
58
B
O
ASP
58
B
N
MET
50
B
N
MET
50
B
O
ILE
51
B
O
ILE
51
B
N
VAL
34
B
N
VAL
34
B
O
GLN
39
B
O
GLN
39
B
N
ARG
92
B
N
ARG
92
B
N
TYR
93
B
N
TYR
93
B
O
THR
110
B
O
THR
110
C
O
ASN
44
C
O
ASN
44
C
N
ASP
52
C
N
ASP
52
C
O
TYR
53
C
O
TYR
53
C
N
ILE
58
C
N
ILE
58
1
A
CG
GLN
40
A
CG
GLN
40
1
Y
1
A
CD
GLN
40
A
CD
GLN
40
1
Y
1
A
OE1
GLN
40
A
OE1
GLN
40
1
Y
1
A
NE2
GLN
40
A
NE2
GLN
40
1
Y
1
A
CG
LYS
103
A
CG
LYS
103
1
Y
1
A
CD
LYS
103
A
CD
LYS
103
1
Y
1
A
CE
LYS
103
A
CE
LYS
103
1
Y
1
A
NZ
LYS
103
A
NZ
LYS
103
1
Y
1
B
CG
LEU
11
B
CG
LEU
11
1
Y
1
B
CD1
LEU
11
B
CD1
LEU
11
1
Y
1
B
CD2
LEU
11
B
CD2
LEU
11
1
Y
1
B
CG1
VAL
12
B
CG1
VAL
12
1
Y
1
B
CG2
VAL
12
B
CG2
VAL
12
1
Y
1
B
OG
SER
17
B
OG
SER
17
1
Y
1
B
OG
SER
19
B
OG
SER
19
1
Y
1
B
CG
GLN
108
B
CG
GLN
108
1
Y
1
B
CD
GLN
108
B
CD
GLN
108
1
Y
1
B
OE1
GLN
108
B
OE1
GLN
108
1
Y
1
B
NE2
GLN
108
B
NE2
GLN
108
1
Y
1
C
CG
ARG
45
C
CG
ARG
45
1
Y
1
C
CD
ARG
45
C
CD
ARG
45
1
Y
1
C
NE
ARG
45
C
NE
ARG
45
1
Y
1
C
CZ
ARG
45
C
CZ
ARG
45
1
Y
1
C
NH1
ARG
45
C
NH1
ARG
45
1
Y
1
C
NH2
ARG
45
C
NH2
ARG
45
1
Y
1
C
CG
ARG
68
C
CG
ARG
68
1
Y
1
C
CD
ARG
68
C
CD
ARG
68
1
Y
1
C
NE
ARG
68
C
NE
ARG
68
1
Y
1
C
CZ
ARG
68
C
CZ
ARG
68
1
Y
1
C
NH1
ARG
68
C
NH1
ARG
68
1
Y
1
C
NH2
ARG
68
C
NH2
ARG
68
1
Y
1
C
CG
ARG
128
C
CG
ARG
128
1
Y
1
C
CD
ARG
128
C
CD
ARG
128
1
Y
1
C
NE
ARG
128
C
NE
ARG
128
1
Y
1
C
CZ
ARG
128
C
CZ
ARG
128
1
Y
1
C
NH1
ARG
128
C
NH1
ARG
128
1
Y
1
C
NH2
ARG
128
C
NH2
ARG
128
1
Y
1
B
ALA
13
B
ALA
13
1
Y
1
B
PRO
14
B
PRO
14
1
Y
1
B
SER
15
B
SER
15
1
Y
1
B
GLN
16
B
GLN
16
1
Y
1
B
SER
115
B
SER
115
1
Y
1
B
SER
116
B
SER
116
1
Y
1
A
A
O
N
THR
ARG
94
96
2.11
1
17.47
2.70
111.00
128.47
A
A
A
N
CA
C
THR
THR
THR
94
94
94
N
1
-14.01
1.50
119.30
105.29
A
A
A
C
N
CA
THR
PRO
PRO
94
95
95
Y
1
-15.41
2.50
113.10
97.69
C
C
C
N
CA
C
GLY
GLY
GLY
4
4
4
N
1
A
ASN
31
72.02
-1.98
1
A
THR
51
71.89
-50.16
1
A
SER
93
66.27
-171.72
1
A
PRO
95
-53.12
105.83
1
B
LYS
43
-109.89
-165.03
1
B
ALA
91
178.52
176.55
0.2403
0.207
2.00
15.0
2214
23556
9.4
95.7
1
2.00
15.0
217
2863
0
0
2646
1.528
0.008
2.0
99.0
1G7L
53007
23556
0.051
1
95.7
0.35
2.00
2.05
93.1
data collection
MAR345
data scaling
SCALEPACK
phasing
AMoRE
refinement
CNS
CRYSTAL STRUCTURE OF HEN EGG WHITE LYSOZYME (HEL) COMPLEXED WITH THE MUTANT ANTI-HEL MONOCLONAL ANTIBODY D1.3 (VLW92S)
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
A
GLN
79
A
GLN
79
HELX_P
A
PHE
83
A
PHE
83
5
1
5
B
LEU
63
B
LEU
63
HELX_P
B
SER
65
B
SER
65
5
2
3
B
ASN
73
B
ASN
73
HELX_P
B
LYS
75
B
LYS
75
5
3
3
B
HIS
86
B
HIS
86
HELX_P
B
THR
90
B
THR
90
5
4
5
C
GLY
4
C
GLY
4
HELX_P
C
HIS
15
C
HIS
15
1
5
12
C
SER
24
C
SER
24
HELX_P
C
ASN
37
C
ASN
37
1
6
14
C
CYS
80
C
CYS
80
HELX_P
C
LEU
84
C
LEU
84
5
7
5
C
ILE
88
C
ILE
88
HELX_P
C
VAL
99
C
VAL
99
1
8
12
C
ASN
103
C
ASN
103
HELX_P
C
ALA
107
C
ALA
107
5
9
5
C
TRP
108
C
TRP
108
HELX_P
C
CYS
115
C
CYS
115
1
10
8
C
ASP
119
C
ASP
119
HELX_P
C
ILE
124
C
ILE
124
5
11
6
disulf
2.360
A
CYS
23
A
SG
CYS
23
1_555
A
CYS
88
A
SG
CYS
88
1_555
disulf
2.359
B
CYS
22
B
SG
CYS
22
1_555
B
CYS
95
B
SG
CYS
95
1_555
disulf
2.444
C
CYS
6
C
SG
CYS
6
1_555
C
CYS
127
C
SG
CYS
127
1_555
disulf
2.337
C
CYS
30
C
SG
CYS
30
1_555
C
CYS
115
C
SG
CYS
115
1_555
disulf
2.528
C
CYS
64
C
SG
CYS
64
1_555
C
CYS
80
C
SG
CYS
80
1_555
disulf
2.337
C
CYS
76
C
SG
CYS
76
1_555
C
CYS
94
C
SG
CYS
94
1_555
HYDROLASE INHIBITOR/HYDROLASE
HYDROLASE INHIBITOR/HYDROLASE, HYDROLASE INHIBITOR-HYDROLASE complex
A
SER
7
A
SER
7
1
A
PRO
8
A
PRO
8
-0.23
CAA43096
GB
1
1
1333979
DIQMTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKPGKSPQLLVYNAKTLADGVPSRFSGSGSGTQYSLKINSLQP
EDFGSYYCQHFWSTPWTFGGGTKLEIK
HV44_MOUSE
UNP
2
133
P01820
QVQLQESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFL
KMNSLHTDDTARYYCARERDYRLDYWGQGTTVTVSS
LYSC_CHICK
UNP
3
19
P00698
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC
SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
1
107
1G7L
1
107
1333979
A
1
1
107
133
248
1G7L
1
116
P01820
B
2
1
116
19
147
1G7L
1
129
P00698
C
3
1
129
1
GLN
conflict
VAL
3
1G7L
A
1333979
GB
3
3
1
MET
conflict
LEU
4
1G7L
A
1333979
GB
4
4
1
PRO
conflict
GLN
40
1G7L
A
1333979
GB
40
40
1
ASN
conflict
TYR
50
1G7L
A
1333979
GB
50
50
1
ALA
conflict
THR
51
1G7L
A
1333979
GB
51
51
1
LYS
conflict
THR
52
1G7L
A
1333979
GB
52
52
1
TRP
engineered mutation
SER
92
1G7L
A
1333979
GB
92
92
1
TRP
conflict
ARG
96
1G7L
A
1333979
GB
96
96
2
VAL
conflict
LEU
112
1G7L
B
P01820
UNP
244
112
4
6
4
5
5
3
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LEU
4
A
LEU
4
A
SER
7
A
SER
7
A
VAL
19
A
VAL
19
A
ALA
25
A
ALA
25
A
GLN
70
A
GLN
70
A
ILE
75
A
ILE
75
A
PHE
62
A
PHE
62
A
SER
67
A
SER
67
A
SER
10
A
SER
10
A
ALA
13
A
ALA
13
A
THR
102
A
THR
102
A
ILE
106
A
ILE
106
A
GLY
84
A
GLY
84
A
HIS
90
A
HIS
90
A
LEU
33
A
LEU
33
A
GLN
38
A
GLN
38
A
GLN
45
A
GLN
45
A
TYR
49
A
TYR
49
A
THR
53
A
THR
53
A
LEU
54
A
LEU
54
B
GLN
3
B
GLN
3
B
SER
7
B
SER
7
B
LEU
18
B
LEU
18
B
SER
25
B
SER
25
B
GLN
77
B
GLN
77
B
MET
82
B
MET
82
B
LEU
67
B
LEU
67
B
ASP
72
B
ASP
72
B
THR
57
B
THR
57
B
TYR
59
B
TYR
59
B
GLU
46
B
GLU
46
B
ILE
51
B
ILE
51
B
GLY
33
B
GLY
33
B
GLN
39
B
GLN
39
B
ALA
91
B
ALA
91
B
GLU
98
B
GLU
98
B
LEU
103
B
LEU
103
B
TRP
106
B
TRP
106
B
THR
57
B
THR
57
B
TYR
59
B
TYR
59
B
GLU
46
B
GLU
46
B
ILE
51
B
ILE
51
B
GLY
33
B
GLY
33
B
GLN
39
B
GLN
39
B
ALA
91
B
ALA
91
B
GLU
98
B
GLU
98
B
THR
110
B
THR
110
B
LEU
112
B
LEU
112
C
THR
43
C
THR
43
C
ARG
45
C
ARG
45
C
THR
51
C
THR
51
C
TYR
53
C
TYR
53
C
ILE
58
C
ILE
58
C
ASN
59
C
ASN
59
5
C 1 2 1