0.011272 0.000000 0.000000 0.000000 0.011272 0.000000 0.000000 0.000000 0.023572 0.00000 0.00000 0.00000 Campos, A. Zhang, R.G. Alkire, R.W. Matsumura, P. Westbrook, E.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.00 90.00 90.00 88.717 88.717 42.423 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Mol.Microbiol. MOMIEE 2007 0950-382X 39 567 580 10.1046/j.1365-2958.2001.02247.x 11169099 Crystal structure of the global regulator FlhD from Escherichia coli at 1.8 A resolution. 2001 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 sagittal focusing monochromator CCD 1998-08-23 APS-1 sagittally focused Si(111) MAD M x-ray 1 0.9464 1.0 0.9793 1.0 0.9794 1.0 1.0332 1.0 19-ID APS 0.9464,0.9793,0.9794,1.0332 SYNCHROTRON APS BEAMLINE 19-ID 13333.386 FLAGELLAR TRANSCRIPTIONAL ACTIVATOR FLHD 2 man polymer 18.015 water 117 nat water no no MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMATTLAALTLPQMVKLAETNQLVCHFRFDSHQTITQLTQ DSRVDDLQQIHTGIMLSTRLLNDVNQPEEALRKKRA MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMATTLAALTLPQMVKLAETNQLVCHFRFDSHQTITQLTQ DSRVDDLQQIHTGIMLSTRLLNDVNQPEEALRKKRA A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia Escherichia sample 562 Escherichia coli 562 Escherichia coli B834(DE3) PLASMID PXL25 1 1.57 78.4 VAPOR DIFFUSION, HANGING DROP 8.5 0.1 M Tris, 0.2 M sodium acetate, 30% PEG 5000, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 300K 300 software repository Initial release Version format compliance Version format compliance Refinement description 1 0 2001-03-07 1 1 2008-04-27 1 2 2011-07-13 1 3 2017-10-04 SEQUENCE Mass Spectrometry experiments (Soutouroina et al, 1999, J Bacteriol 181: 7500-7508) has demonstrated that FlhD from Escherichia coli, contains 116 residues, not 119 as in the sequence database reference. The first putative start codon is not the correct one and the three first residues do not exist. RCSB Y RCSB 2000-11-17 REL HOH water HOH 301 2 HOH HOH 301 A HOH 304 2 HOH HOH 304 A HOH 305 2 HOH HOH 305 A HOH 309 2 HOH HOH 309 A HOH 310 2 HOH HOH 310 A HOH 313 2 HOH HOH 313 A HOH 315 2 HOH HOH 315 A HOH 318 2 HOH HOH 318 A HOH 320 2 HOH HOH 320 A HOH 321 2 HOH HOH 321 A HOH 322 2 HOH HOH 322 A HOH 324 2 HOH HOH 324 A HOH 327 2 HOH HOH 327 A HOH 329 2 HOH HOH 329 A HOH 332 2 HOH HOH 332 A HOH 334 2 HOH HOH 334 A HOH 336 2 HOH HOH 336 A HOH 338 2 HOH HOH 338 A HOH 342 2 HOH HOH 342 A HOH 343 2 HOH HOH 343 A HOH 344 2 HOH HOH 344 A HOH 345 2 HOH HOH 345 A HOH 346 2 HOH HOH 346 A HOH 348 2 HOH HOH 348 A HOH 352 2 HOH HOH 352 A HOH 354 2 HOH HOH 354 A HOH 355 2 HOH HOH 355 A HOH 356 2 HOH HOH 356 A HOH 361 2 HOH HOH 361 A HOH 362 2 HOH HOH 362 A HOH 363 2 HOH HOH 363 A HOH 367 2 HOH HOH 367 A HOH 368 2 HOH HOH 368 A HOH 373 2 HOH HOH 373 A HOH 374 2 HOH HOH 374 A HOH 375 2 HOH HOH 375 A HOH 377 2 HOH HOH 377 A HOH 378 2 HOH HOH 378 A HOH 382 2 HOH HOH 382 A HOH 383 2 HOH HOH 383 A HOH 385 2 HOH HOH 385 A HOH 387 2 HOH HOH 387 A HOH 388 2 HOH HOH 388 A HOH 389 2 HOH HOH 389 A HOH 391 2 HOH HOH 391 A HOH 393 2 HOH HOH 393 A HOH 394 2 HOH HOH 394 A HOH 397 2 HOH HOH 397 A HOH 399 2 HOH HOH 399 A HOH 400 2 HOH HOH 400 A HOH 401 2 HOH HOH 401 A HOH 405 2 HOH HOH 405 A HOH 406 2 HOH HOH 406 A HOH 411 2 HOH HOH 411 A HOH 412 2 HOH HOH 412 A HOH 414 2 HOH HOH 414 A HOH 415 2 HOH HOH 415 A HOH 416 2 HOH HOH 416 A HOH 302 2 HOH HOH 302 B HOH 303 2 HOH HOH 303 B HOH 306 2 HOH HOH 306 B HOH 307 2 HOH HOH 307 B HOH 308 2 HOH HOH 308 B HOH 311 2 HOH HOH 311 B HOH 312 2 HOH HOH 312 B HOH 314 2 HOH HOH 314 B HOH 316 2 HOH HOH 316 B HOH 317 2 HOH HOH 317 B HOH 319 2 HOH HOH 319 B HOH 323 2 HOH HOH 323 B HOH 325 2 HOH HOH 325 B HOH 326 2 HOH HOH 326 B HOH 328 2 HOH HOH 328 B HOH 330 2 HOH HOH 330 B HOH 331 2 HOH HOH 331 B HOH 333 2 HOH HOH 333 B HOH 335 2 HOH HOH 335 B HOH 337 2 HOH HOH 337 B HOH 339 2 HOH HOH 339 B HOH 340 2 HOH HOH 340 B HOH 341 2 HOH HOH 341 B HOH 347 2 HOH HOH 347 B HOH 349 2 HOH HOH 349 B HOH 350 2 HOH HOH 350 B HOH 351 2 HOH HOH 351 B HOH 353 2 HOH HOH 353 B HOH 357 2 HOH HOH 357 B HOH 358 2 HOH HOH 358 B HOH 359 2 HOH HOH 359 B HOH 360 2 HOH HOH 360 B HOH 364 2 HOH HOH 364 B HOH 365 2 HOH HOH 365 B HOH 366 2 HOH HOH 366 B HOH 369 2 HOH HOH 369 B HOH 370 2 HOH HOH 370 B HOH 371 2 HOH HOH 371 B HOH 372 2 HOH HOH 372 B HOH 376 2 HOH HOH 376 B HOH 379 2 HOH HOH 379 B HOH 380 2 HOH HOH 380 B HOH 381 2 HOH HOH 381 B HOH 384 2 HOH HOH 384 B HOH 386 2 HOH HOH 386 B HOH 390 2 HOH HOH 390 B HOH 392 2 HOH HOH 392 B HOH 395 2 HOH HOH 395 B HOH 396 2 HOH HOH 396 B HOH 398 2 HOH HOH 398 B HOH 402 2 HOH HOH 402 B HOH 403 2 HOH HOH 403 B HOH 404 2 HOH HOH 404 B HOH 407 2 HOH HOH 407 B HOH 408 2 HOH HOH 408 B HOH 409 2 HOH HOH 409 B HOH 410 2 HOH HOH 410 B HOH 413 2 HOH HOH 413 B HOH 417 2 HOH HOH 417 B MET 1 n 1 MET 1 A HIS 2 n 2 HIS 2 A THR 3 n 3 THR 3 A SER 4 n 4 SER 4 A GLU 5 n 5 GLU 5 A LEU 6 n 6 LEU 6 A LEU 7 n 7 LEU 7 A LYS 8 n 8 LYS 8 A HIS 9 n 9 HIS 9 A ILE 10 n 10 ILE 10 A TYR 11 n 11 TYR 11 A ASP 12 n 12 ASP 12 A ILE 13 n 13 ILE 13 A ASN 14 n 14 ASN 14 A LEU 15 n 15 LEU 15 A SER 16 n 16 SER 16 A TYR 17 n 17 TYR 17 A LEU 18 n 18 LEU 18 A LEU 19 n 19 LEU 19 A LEU 20 n 20 LEU 20 A ALA 21 n 21 ALA 21 A GLN 22 n 22 GLN 22 A ARG 23 n 23 ARG 23 A LEU 24 n 24 LEU 24 A ILE 25 n 25 ILE 25 A VAL 26 n 26 VAL 26 A GLN 27 n 27 GLN 27 A ASP 28 n 28 ASP 28 A LYS 29 n 29 LYS 29 A ALA 30 n 30 ALA 30 A SER 31 n 31 SER 31 A ALA 32 n 32 ALA 32 A MET 33 n 33 MET 33 A PHE 34 n 34 PHE 34 A ARG 35 n 35 ARG 35 A LEU 36 n 36 LEU 36 A GLY 37 n 37 GLY 37 A ILE 38 n 38 ILE 38 A ASN 39 n 39 ASN 39 A GLU 40 n 40 GLU 40 A GLU 41 n 41 GLU 41 A MET 42 n 42 MET 42 A ALA 43 n 43 ALA 43 A THR 44 n 44 THR 44 A THR 45 n 45 THR 45 A LEU 46 n 46 LEU 46 A ALA 47 n 47 ALA 47 A ALA 48 n 48 ALA 48 A LEU 49 n 49 LEU 49 A THR 50 n 50 THR 50 A LEU 51 n 51 LEU 51 A PRO 52 n 52 PRO 52 A GLN 53 n 53 GLN 53 A MET 54 n 54 MET 54 A VAL 55 n 55 VAL 55 A LYS 56 n 56 LYS 56 A LEU 57 n 57 LEU 57 A ALA 58 n 58 ALA 58 A GLU 59 n 59 GLU 59 A THR 60 n 60 THR 60 A ASN 61 n 61 ASN 61 A GLN 62 n 62 GLN 62 A LEU 63 n 63 LEU 63 A VAL 64 n 64 VAL 64 A CYS 65 n 65 CYS 65 A HIS 66 n 66 HIS 66 A PHE 67 n 67 PHE 67 A ARG 68 n 68 ARG 68 A PHE 69 n 69 PHE 69 A ASP 70 n 70 ASP 70 A SER 71 n 71 SER 71 A HIS 72 n 72 HIS 72 A GLN 73 n 73 GLN 73 A THR 74 n 74 THR 74 A ILE 75 n 75 ILE 75 A THR 76 n 76 THR 76 A GLN 77 n 77 GLN 77 A LEU 78 n 78 LEU 78 A THR 79 n 79 THR 79 A GLN 80 n 80 GLN 80 A ASP 81 n 81 ASP 81 A SER 82 n 82 SER 82 A ARG 83 n 83 ARG 83 A VAL 84 n 84 VAL 84 A ASP 85 n 85 ASP 85 A ASP 86 n 86 ASP 86 A LEU 87 n 87 LEU 87 A GLN 88 n 88 GLN 88 A GLN 89 n 89 GLN 89 A ILE 90 n 90 ILE 90 A HIS 91 n 91 HIS 91 A THR 92 n 92 THR 92 A GLY 93 n 93 GLY 93 A ILE 94 n 94 ILE 94 A MET 95 n 95 MET 95 A LEU 96 n 96 LEU 96 A SER 97 n 97 SER 97 A THR 98 n 98 THR 98 A n 99 99 A n 100 100 A n 101 101 A n 102 102 A n 103 103 A n 104 104 A n 105 105 A n 106 106 A n 107 107 A n 108 108 A n 109 109 A n 110 110 A n 111 111 A n 112 112 A n 113 113 A n 114 114 A n 115 115 A n 116 116 A n 1 1 B n 2 2 B THR 3 n 3 THR 3 B SER 4 n 4 SER 4 B GLU 5 n 5 GLU 5 B LEU 6 n 6 LEU 6 B LEU 7 n 7 LEU 7 B LYS 8 n 8 LYS 8 B HIS 9 n 9 HIS 9 B ILE 10 n 10 ILE 10 B TYR 11 n 11 TYR 11 B ASP 12 n 12 ASP 12 B ILE 13 n 13 ILE 13 B ASN 14 n 14 ASN 14 B LEU 15 n 15 LEU 15 B SER 16 n 16 SER 16 B TYR 17 n 17 TYR 17 B LEU 18 n 18 LEU 18 B LEU 19 n 19 LEU 19 B LEU 20 n 20 LEU 20 B ALA 21 n 21 ALA 21 B GLN 22 n 22 GLN 22 B ARG 23 n 23 ARG 23 B LEU 24 n 24 LEU 24 B ILE 25 n 25 ILE 25 B VAL 26 n 26 VAL 26 B GLN 27 n 27 GLN 27 B ASP 28 n 28 ASP 28 B LYS 29 n 29 LYS 29 B ALA 30 n 30 ALA 30 B SER 31 n 31 SER 31 B ALA 32 n 32 ALA 32 B MET 33 n 33 MET 33 B PHE 34 n 34 PHE 34 B ARG 35 n 35 ARG 35 B LEU 36 n 36 LEU 36 B GLY 37 n 37 GLY 37 B ILE 38 n 38 ILE 38 B ASN 39 n 39 ASN 39 B GLU 40 n 40 GLU 40 B GLU 41 n 41 GLU 41 B MET 42 n 42 MET 42 B ALA 43 n 43 ALA 43 B THR 44 n 44 THR 44 B THR 45 n 45 THR 45 B LEU 46 n 46 LEU 46 B ALA 47 n 47 ALA 47 B ALA 48 n 48 ALA 48 B LEU 49 n 49 LEU 49 B THR 50 n 50 THR 50 B LEU 51 n 51 LEU 51 B PRO 52 n 52 PRO 52 B GLN 53 n 53 GLN 53 B MET 54 n 54 MET 54 B VAL 55 n 55 VAL 55 B LYS 56 n 56 LYS 56 B LEU 57 n 57 LEU 57 B ALA 58 n 58 ALA 58 B GLU 59 n 59 GLU 59 B THR 60 n 60 THR 60 B ASN 61 n 61 ASN 61 B GLN 62 n 62 GLN 62 B LEU 63 n 63 LEU 63 B VAL 64 n 64 VAL 64 B CYS 65 n 65 CYS 65 B HIS 66 n 66 HIS 66 B PHE 67 n 67 PHE 67 B ARG 68 n 68 ARG 68 B PHE 69 n 69 PHE 69 B ASP 70 n 70 ASP 70 B SER 71 n 71 SER 71 B HIS 72 n 72 HIS 72 B GLN 73 n 73 GLN 73 B THR 74 n 74 THR 74 B ILE 75 n 75 ILE 75 B THR 76 n 76 THR 76 B GLN 77 n 77 GLN 77 B LEU 78 n 78 LEU 78 B THR 79 n 79 THR 79 B GLN 80 n 80 GLN 80 B ASP 81 n 81 ASP 81 B SER 82 n 82 SER 82 B n 83 83 B n 84 84 B n 85 85 B n 86 86 B n 87 87 B n 88 88 B n 89 89 B n 90 90 B n 91 91 B n 92 92 B n 93 93 B n 94 94 B n 95 95 B n 96 96 B n 97 97 B n 98 98 B n 99 99 B n 100 100 B n 101 101 B n 102 102 B n 103 103 B n 104 104 B n 105 105 B n 106 106 B n 107 107 B n 108 108 B n 109 109 B n 110 110 B n 111 111 B n 112 112 B n 113 113 B n 114 114 B n 115 115 B n 116 116 B author_and_software_defined_assembly PISA 2 dimeric 5000 -36 9570 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N HIS 66 A N HIS 66 B O HIS 66 B O HIS 66 1 A ARG 99 A ARG 99 1 Y 1 A LEU 100 A LEU 100 1 Y 1 A LEU 101 A LEU 101 1 Y 1 A ASN 102 A ASN 102 1 Y 1 A ASP 103 A ASP 103 1 Y 1 A VAL 104 A VAL 104 1 Y 1 A ASN 105 A ASN 105 1 Y 1 A GLN 106 A GLN 106 1 Y 1 A PRO 107 A PRO 107 1 Y 1 A GLU 108 A GLU 108 1 Y 1 A GLU 109 A GLU 109 1 Y 1 A ALA 110 A ALA 110 1 Y 1 A LEU 111 A LEU 111 1 Y 1 A ARG 112 A ARG 112 1 Y 1 A LYS 113 A LYS 113 1 Y 1 A LYS 114 A LYS 114 1 Y 1 A ARG 115 A ARG 115 1 Y 1 A ALA 116 A ALA 116 1 Y 1 B MET 1 B MET 1 1 Y 1 B HIS 2 B HIS 2 1 Y 1 B ARG 83 B ARG 83 1 Y 1 B VAL 84 B VAL 84 1 Y 1 B ASP 85 B ASP 85 1 Y 1 B ASP 86 B ASP 86 1 Y 1 B LEU 87 B LEU 87 1 Y 1 B GLN 88 B GLN 88 1 Y 1 B GLN 89 B GLN 89 1 Y 1 B ILE 90 B ILE 90 1 Y 1 B HIS 91 B HIS 91 1 Y 1 B THR 92 B THR 92 1 Y 1 B GLY 93 B GLY 93 1 Y 1 B ILE 94 B ILE 94 1 Y 1 B MET 95 B MET 95 1 Y 1 B LEU 96 B LEU 96 1 Y 1 B SER 97 B SER 97 1 Y 1 B THR 98 B THR 98 1 Y 1 B ARG 99 B ARG 99 1 Y 1 B LEU 100 B LEU 100 1 Y 1 B LEU 101 B LEU 101 1 Y 1 B ASN 102 B ASN 102 1 Y 1 B ASP 103 B ASP 103 1 Y 1 B VAL 104 B VAL 104 1 Y 1 B ASN 105 B ASN 105 1 Y 1 B GLN 106 B GLN 106 1 Y 1 B PRO 107 B PRO 107 1 Y 1 B GLU 108 B GLU 108 1 Y 1 B GLU 109 B GLU 109 1 Y 1 B ALA 110 B ALA 110 1 Y 1 B LEU 111 B LEU 111 1 Y 1 B ARG 112 B ARG 112 1 Y 1 B LYS 113 B LYS 113 1 Y 1 B LYS 114 B LYS 114 1 Y 1 B ARG 115 B ARG 115 1 Y 1 B ALA 116 B ALA 116 1 Y 1 B B SD CE MET MET 54 54 -0.427 0.056 1.774 1.347 N 1 A ASP 28 -164.51 90.74 1 A ASP 81 72.55 99.54 1 A GLN 89 -36.11 -70.89 1 B SER 4 -50.93 -8.39 1 B GLU 5 -70.25 -105.24 1 B ASP 28 -159.65 87.03 1 B GLN 80 174.27 89.71 -2.531 0 0 -2.531 0 5.042 0.299 0.218 0.218 0.218 1.8 10.0 747 15124 15124 random 1 THROUGHOUT 0.0 0.0 MAD none Engh & Huber 1.8 10.0 117 1535 0 0 1418 0.019 1.40 16.8 0.318 0.299 1.88 70 1519 1519 8 4.6 79.60 25.02 1.8 10.0 1G8E 15124 15124 0.0 0.0 0.034 1 21.4 3.33 97.4 0.318 1.80 1.88 2.5 2.8 79.6 data scaling d*TREK data reduction d*TREK phasing SOLVE refinement CNS FLAGELLAR TRANSCRIPTIONAL ACTIVATOR FLHD CRYSTAL STRUCTURE OF FLHD FROM ESCHERICHIA COLI 1 N N 1 N N 2 N N 2 N N A THR 3 A THR 3 HELX_P A ASP 28 A ASP 28 1 1 26 A ASP 28 A ASP 28 HELX_P A GLY 37 A GLY 37 1 2 10 A ASN 39 A ASN 39 HELX_P A ALA 48 A ALA 48 1 3 10 A THR 50 A THR 50 HELX_P A GLU 59 A GLU 59 1 4 10 A SER 71 A SER 71 HELX_P A THR 79 A THR 79 1 5 9 A SER 82 A SER 82 HELX_P A THR 92 A THR 92 1 6 11 A GLY 93 A GLY 93 HELX_P A THR 98 A THR 98 5 7 6 B GLU 5 B GLU 5 HELX_P B ASP 28 B ASP 28 1 8 24 B ASP 28 B ASP 28 HELX_P B GLY 37 B GLY 37 1 9 10 B ASN 39 B ASN 39 HELX_P B LEU 49 B LEU 49 1 10 11 B THR 50 B THR 50 HELX_P B GLU 59 B GLU 59 1 11 10 B SER 71 B SER 71 HELX_P B THR 79 B THR 79 1 12 9 disulf 2.053 A CYS 65 A SG CYS 65 1_555 B CYS 65 B SG CYS 65 1_555 TRANSCRIPTION genetic regulator, DNA binding protein, TRANSCRIPTION FLHD_ECOLI UNP 1 4 P0A8S9 MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMATTLAALTLPQMVKLAETNQLVCHFRFDSHQTITQLTQ DSRVDDLQQIHTGIMLSTRLLNDVNQPEEALRKKRA 4 119 1G8E 1 116 P0A8S9 A 1 1 116 4 119 1G8E 1 116 P0A8S9 B 1 1 116 2 anti-parallel A CYS 65 A CYS 65 A PHE 67 A PHE 67 B CYS 65 B CYS 65 B PHE 67 B PHE 67 79 I 4