0.008254
0.000000
0.001011
0.000000
0.023142
0.000000
0.000000
0.000000
0.018252
0.00000
0.00000
0.00000
Boisvert, D.C.
Kim, S.H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
96.98
90.00
121.152
43.212
55.197
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
To be Published
0353
A Structural Approach to Gene Function and Structure Quality for Pyrococcus horikshii Fibrillarin
UK
Embo J.
EMJODG
0897
0261-4189
19
317
323
10.1093/emboj/19.3.317
Crystal structure of a fibrillarin homologue from Methanococcus jannaschii, a hyperthermophile, at 1.6 angstroms resolution
2000
10.2210/pdb1g8s/pdb
pdb_00001g8s
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
170
1
monochromatic
IMAGE PLATE
1997-10-01
MARRESEARCH
monochromatic
MAD
M
x-ray
1
0.97894
1.0
X4A
NSLS
0.97894
SYNCHROTRON
NSLS BEAMLINE X4A
26005.258
FIBRILLARIN-LIKE PRE-RRNA PROCESSING PROTEIN
1
man
polymer
149.211
METHIONINE
1
syn
non-polymer
18.015
water
140
nat
water
no
no
MEDIKIKEIFENIYEVDLGDGLKRIATKSIVKGKKVYDEKIIKIGDEEYRIWNPNKSKLAAAIIKGLKVMPIKRDSKILY
LGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYEDVAQPNQAEIL
IKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKEILEAGGFKIVDEVDIEPFEKDHVMFVGIWEGK
MEDIKIKEIFENIYEVDLGDGLKRIATKSIVKGKKVYDEKIIKIGDEEYRIWNPNKSKLAAAIIKGLKVMPIKRDSKILY
LGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYEDVAQPNQAEIL
IKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKEILEAGGFKIVDEVDIEPFEKDHVMFVGIWEGK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Methanocaldococcus
Escherichia
sample
0697
2190
Methanocaldococcus jannaschii
562
Escherichia coli
B834(DE3)
PLASMID
PET21A
1
2.76
55.38
VAPOR DIFFUSION, SITTING DROP
5.6
20% PEG 4000, 20% Isopropanol, 0.1 M NaCitrate, 25 mg/ml fibrillarin, pH 5.6, VAPOR DIFFUSION, SITTING DROP, temperature 273K
273
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_site
repository
Initial release
Version format compliance
Version format compliance
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
2003-10-14
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-10-04
1
4
2023-08-09
_software.classification
_software.name
_software.version
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
1FBN is the same protein but without a refined methionine as part of the structure
1G8A contains the same protein but from a different source
RCSB
Y
RCSB
2000-11-20
REL
REL
MET
METHIONINE
HOH
water
1FBN
PDB
experimental model
MET
500
2
MET
MET
500
A
WAT
1
3
HOH
HOH
501
A
WAT
2
3
HOH
HOH
502
A
WAT
3
3
HOH
HOH
503
A
WAT
4
3
HOH
HOH
504
A
WAT
5
3
HOH
HOH
505
A
WAT
6
3
HOH
HOH
506
A
WAT
7
3
HOH
HOH
507
A
WAT
8
3
HOH
HOH
508
A
WAT
9
3
HOH
HOH
509
A
WAT
10
3
HOH
HOH
510
A
WAT
11
3
HOH
HOH
511
A
WAT
12
3
HOH
HOH
512
A
WAT
13
3
HOH
HOH
513
A
WAT
14
3
HOH
HOH
514
A
WAT
15
3
HOH
HOH
515
A
WAT
16
3
HOH
HOH
516
A
WAT
17
3
HOH
HOH
517
A
WAT
18
3
HOH
HOH
518
A
WAT
19
3
HOH
HOH
519
A
WAT
20
3
HOH
HOH
520
A
WAT
21
3
HOH
HOH
521
A
WAT
22
3
HOH
HOH
522
A
WAT
23
3
HOH
HOH
523
A
WAT
24
3
HOH
HOH
524
A
WAT
25
3
HOH
HOH
525
A
WAT
26
3
HOH
HOH
526
A
WAT
27
3
HOH
HOH
527
A
WAT
28
3
HOH
HOH
528
A
WAT
29
3
HOH
HOH
529
A
WAT
30
3
HOH
HOH
530
A
WAT
31
3
HOH
HOH
531
A
WAT
32
3
HOH
HOH
532
A
WAT
33
3
HOH
HOH
533
A
WAT
34
3
HOH
HOH
534
A
WAT
35
3
HOH
HOH
535
A
WAT
36
3
HOH
HOH
536
A
WAT
37
3
HOH
HOH
537
A
WAT
38
3
HOH
HOH
538
A
WAT
39
3
HOH
HOH
539
A
WAT
40
3
HOH
HOH
540
A
WAT
41
3
HOH
HOH
541
A
WAT
42
3
HOH
HOH
542
A
WAT
43
3
HOH
HOH
543
A
WAT
44
3
HOH
HOH
544
A
WAT
45
3
HOH
HOH
545
A
WAT
46
3
HOH
HOH
546
A
WAT
47
3
HOH
HOH
547
A
WAT
48
3
HOH
HOH
548
A
WAT
49
3
HOH
HOH
549
A
WAT
50
3
HOH
HOH
550
A
WAT
51
3
HOH
HOH
551
A
WAT
52
3
HOH
HOH
552
A
WAT
53
3
HOH
HOH
553
A
WAT
54
3
HOH
HOH
554
A
WAT
55
3
HOH
HOH
555
A
WAT
56
3
HOH
HOH
556
A
WAT
57
3
HOH
HOH
557
A
WAT
58
3
HOH
HOH
558
A
WAT
59
3
HOH
HOH
559
A
WAT
60
3
HOH
HOH
560
A
WAT
61
3
HOH
HOH
561
A
WAT
62
3
HOH
HOH
562
A
WAT
63
3
HOH
HOH
563
A
WAT
64
3
HOH
HOH
564
A
WAT
65
3
HOH
HOH
565
A
WAT
66
3
HOH
HOH
566
A
WAT
67
3
HOH
HOH
567
A
WAT
68
3
HOH
HOH
568
A
WAT
69
3
HOH
HOH
569
A
WAT
70
3
HOH
HOH
570
A
WAT
71
3
HOH
HOH
571
A
WAT
72
3
HOH
HOH
572
A
WAT
73
3
HOH
HOH
573
A
WAT
74
3
HOH
HOH
574
A
WAT
75
3
HOH
HOH
575
A
WAT
76
3
HOH
HOH
576
A
WAT
77
3
HOH
HOH
577
A
WAT
78
3
HOH
HOH
578
A
WAT
79
3
HOH
HOH
579
A
WAT
80
3
HOH
HOH
580
A
WAT
81
3
HOH
HOH
581
A
WAT
82
3
HOH
HOH
582
A
WAT
83
3
HOH
HOH
583
A
WAT
84
3
HOH
HOH
584
A
WAT
85
3
HOH
HOH
585
A
WAT
86
3
HOH
HOH
586
A
WAT
87
3
HOH
HOH
587
A
WAT
88
3
HOH
HOH
588
A
WAT
89
3
HOH
HOH
589
A
WAT
90
3
HOH
HOH
590
A
WAT
91
3
HOH
HOH
591
A
WAT
92
3
HOH
HOH
592
A
WAT
93
3
HOH
HOH
593
A
WAT
94
3
HOH
HOH
594
A
WAT
95
3
HOH
HOH
595
A
WAT
96
3
HOH
HOH
596
A
WAT
97
3
HOH
HOH
597
A
WAT
98
3
HOH
HOH
598
A
WAT
99
3
HOH
HOH
599
A
WAT
100
3
HOH
HOH
600
A
WAT
101
3
HOH
HOH
601
A
WAT
102
3
HOH
HOH
602
A
WAT
103
3
HOH
HOH
603
A
WAT
104
3
HOH
HOH
604
A
WAT
105
3
HOH
HOH
605
A
WAT
106
3
HOH
HOH
606
A
WAT
107
3
HOH
HOH
607
A
WAT
108
3
HOH
HOH
608
A
WAT
109
3
HOH
HOH
609
A
WAT
110
3
HOH
HOH
610
A
WAT
111
3
HOH
HOH
611
A
WAT
112
3
HOH
HOH
612
A
WAT
113
3
HOH
HOH
613
A
WAT
114
3
HOH
HOH
614
A
WAT
115
3
HOH
HOH
615
A
WAT
116
3
HOH
HOH
616
A
WAT
117
3
HOH
HOH
617
A
WAT
118
3
HOH
HOH
618
A
WAT
119
3
HOH
HOH
619
A
WAT
120
3
HOH
HOH
620
A
WAT
121
3
HOH
HOH
621
A
WAT
122
3
HOH
HOH
622
A
WAT
123
3
HOH
HOH
623
A
WAT
124
3
HOH
HOH
624
A
WAT
125
3
HOH
HOH
625
A
WAT
126
3
HOH
HOH
626
A
WAT
127
3
HOH
HOH
627
A
WAT
128
3
HOH
HOH
628
A
WAT
129
3
HOH
HOH
629
A
WAT
130
3
HOH
HOH
630
A
WAT
131
3
HOH
HOH
631
A
WAT
132
3
HOH
HOH
632
A
WAT
133
3
HOH
HOH
633
A
WAT
134
3
HOH
HOH
634
A
WAT
135
3
HOH
HOH
635
A
WAT
136
3
HOH
HOH
636
A
WAT
137
3
HOH
HOH
637
A
WAT
138
3
HOH
HOH
638
A
WAT
139
3
HOH
HOH
639
A
WAT
140
3
HOH
HOH
640
A
MET
1
n
1
MET
1
A
GLU
2
n
2
GLU
2
A
ASP
3
n
3
ASP
3
A
ILE
4
n
4
ILE
4
A
LYS
5
n
5
LYS
5
A
ILE
6
n
6
ILE
6
A
LYS
7
n
7
LYS
7
A
GLU
8
n
8
GLU
8
A
ILE
9
n
9
ILE
9
A
PHE
10
n
10
PHE
10
A
GLU
11
n
11
GLU
11
A
ASN
12
n
12
ASN
12
A
ILE
13
n
13
ILE
13
A
TYR
14
n
14
TYR
14
A
GLU
15
n
15
GLU
15
A
VAL
16
n
16
VAL
16
A
ASP
17
n
17
ASP
17
A
LEU
18
n
18
LEU
18
A
GLY
19
n
19
GLY
19
A
ASP
20
n
20
ASP
20
A
GLY
21
n
21
GLY
21
A
LEU
22
n
22
LEU
22
A
LYS
23
n
23
LYS
23
A
ARG
24
n
24
ARG
24
A
ILE
25
n
25
ILE
25
A
ALA
26
n
26
ALA
26
A
THR
27
n
27
THR
27
A
LYS
28
n
28
LYS
28
A
SER
29
n
29
SER
29
A
ILE
30
n
30
ILE
30
A
VAL
31
n
31
VAL
31
A
LYS
32
n
32
LYS
32
A
GLY
33
n
33
GLY
33
A
LYS
34
n
34
LYS
34
A
LYS
35
n
35
LYS
35
A
VAL
36
n
36
VAL
36
A
TYR
37
n
37
TYR
37
A
ASP
38
n
38
ASP
38
A
GLU
39
n
39
GLU
39
A
LYS
40
n
40
LYS
40
A
ILE
41
n
41
ILE
41
A
ILE
42
n
42
ILE
42
A
LYS
43
n
43
LYS
43
A
ILE
44
n
44
ILE
44
A
GLY
45
n
45
GLY
45
A
ASP
46
n
46
ASP
46
A
GLU
47
n
47
GLU
47
A
GLU
48
n
48
GLU
48
A
TYR
49
n
49
TYR
49
A
ARG
50
n
50
ARG
50
A
ILE
51
n
51
ILE
51
A
TRP
52
n
52
TRP
52
A
ASN
53
n
53
ASN
53
A
PRO
54
n
54
PRO
54
A
ASN
55
n
55
ASN
55
A
LYS
56
n
56
LYS
56
A
SER
57
n
57
SER
57
A
LYS
58
n
58
LYS
58
A
LEU
59
n
59
LEU
59
A
ALA
60
n
60
ALA
60
A
ALA
61
n
61
ALA
61
A
ALA
62
n
62
ALA
62
A
ILE
63
n
63
ILE
63
A
ILE
64
n
64
ILE
64
A
LYS
65
n
65
LYS
65
A
GLY
66
n
66
GLY
66
A
LEU
67
n
67
LEU
67
A
LYS
68
n
68
LYS
68
A
VAL
69
n
69
VAL
69
A
MET
70
n
70
MET
70
A
PRO
71
n
71
PRO
71
A
ILE
72
n
72
ILE
72
A
LYS
73
n
73
LYS
73
A
ARG
74
n
74
ARG
74
A
ASP
75
n
75
ASP
75
A
SER
76
n
76
SER
76
A
LYS
77
n
77
LYS
77
A
ILE
78
n
78
ILE
78
A
LEU
79
n
79
LEU
79
A
TYR
80
n
80
TYR
80
A
LEU
81
n
81
LEU
81
A
GLY
82
n
82
GLY
82
A
ALA
83
n
83
ALA
83
A
SER
84
n
84
SER
84
A
ALA
85
n
85
ALA
85
A
GLY
86
n
86
GLY
86
A
THR
87
n
87
THR
87
A
THR
88
n
88
THR
88
A
PRO
89
n
89
PRO
89
A
SER
90
n
90
SER
90
A
HIS
91
n
91
HIS
91
A
VAL
92
n
92
VAL
92
A
ALA
93
n
93
ALA
93
A
ASP
94
n
94
ASP
94
A
ILE
95
n
95
ILE
95
A
ALA
96
n
96
ALA
96
A
ASP
97
n
97
ASP
97
A
LYS
98
n
98
LYS
98
A
GLY
99
n
99
GLY
99
A
ILE
100
n
100
ILE
100
A
VAL
101
n
101
VAL
101
A
TYR
102
n
102
TYR
102
A
ALA
103
n
103
ALA
103
A
ILE
104
n
104
ILE
104
A
GLU
105
n
105
GLU
105
A
TYR
106
n
106
TYR
106
A
ALA
107
n
107
ALA
107
A
PRO
108
n
108
PRO
108
A
ARG
109
n
109
ARG
109
A
ILE
110
n
110
ILE
110
A
MET
111
n
111
MET
111
A
ARG
112
n
112
ARG
112
A
GLU
113
n
113
GLU
113
A
LEU
114
n
114
LEU
114
A
LEU
115
n
115
LEU
115
A
ASP
116
n
116
ASP
116
A
ALA
117
n
117
ALA
117
A
CYS
118
n
118
CYS
118
A
ALA
119
n
119
ALA
119
A
GLU
120
n
120
GLU
120
A
ARG
121
n
121
ARG
121
A
GLU
122
n
122
GLU
122
A
ASN
123
n
123
ASN
123
A
ILE
124
n
124
ILE
124
A
ILE
125
n
125
ILE
125
A
PRO
126
n
126
PRO
126
A
ILE
127
n
127
ILE
127
A
LEU
128
n
128
LEU
128
A
GLY
129
n
129
GLY
129
A
ASP
130
n
130
ASP
130
A
ALA
131
n
131
ALA
131
A
ASN
132
n
132
ASN
132
A
LYS
133
n
133
LYS
133
A
PRO
134
n
134
PRO
134
A
GLN
135
n
135
GLN
135
A
GLU
136
n
136
GLU
136
A
TYR
137
n
137
TYR
137
A
ALA
138
n
138
ALA
138
A
ASN
139
n
139
ASN
139
A
ILE
140
n
140
ILE
140
A
VAL
141
n
141
VAL
141
A
GLU
142
n
142
GLU
142
A
LYS
143
n
143
LYS
143
A
VAL
144
n
144
VAL
144
A
ASP
145
n
145
ASP
145
A
VAL
146
n
146
VAL
146
A
ILE
147
n
147
ILE
147
A
TYR
148
n
148
TYR
148
A
GLU
149
n
149
GLU
149
A
ASP
150
n
150
ASP
150
A
VAL
151
n
151
VAL
151
A
ALA
152
n
152
ALA
152
A
GLN
153
n
153
GLN
153
A
PRO
154
n
154
PRO
154
A
ASN
155
n
155
ASN
155
A
GLN
156
n
156
GLN
156
A
ALA
157
n
157
ALA
157
A
GLU
158
n
158
GLU
158
A
ILE
159
n
159
ILE
159
A
LEU
160
n
160
LEU
160
A
ILE
161
n
161
ILE
161
A
LYS
162
n
162
LYS
162
A
ASN
163
n
163
ASN
163
A
ALA
164
n
164
ALA
164
A
LYS
165
n
165
LYS
165
A
TRP
166
n
166
TRP
166
A
PHE
167
n
167
PHE
167
A
LEU
168
n
168
LEU
168
A
LYS
169
n
169
LYS
169
A
LYS
170
n
170
LYS
170
A
GLY
171
n
171
GLY
171
A
GLY
172
n
172
GLY
172
A
TYR
173
n
173
TYR
173
A
GLY
174
n
174
GLY
174
A
MET
175
n
175
MET
175
A
ILE
176
n
176
ILE
176
A
ALA
177
n
177
ALA
177
A
ILE
178
n
178
ILE
178
A
LYS
179
n
179
LYS
179
A
ALA
180
n
180
ALA
180
A
ARG
181
n
181
ARG
181
A
SER
182
n
182
SER
182
A
ILE
183
n
183
ILE
183
A
ASP
184
n
184
ASP
184
A
VAL
185
n
185
VAL
185
A
THR
186
n
186
THR
186
A
LYS
187
n
187
LYS
187
A
ASP
188
n
188
ASP
188
A
PRO
189
n
189
PRO
189
A
LYS
190
n
190
LYS
190
A
GLU
191
n
191
GLU
191
A
ILE
192
n
192
ILE
192
A
PHE
193
n
193
PHE
193
A
LYS
194
n
194
LYS
194
A
GLU
195
n
195
GLU
195
A
GLN
196
n
196
GLN
196
A
LYS
197
n
197
LYS
197
A
GLU
198
n
198
GLU
198
A
ILE
199
n
199
ILE
199
A
LEU
200
n
200
LEU
200
A
GLU
201
n
201
GLU
201
A
ALA
202
n
202
ALA
202
A
GLY
203
n
203
GLY
203
A
GLY
204
n
204
GLY
204
A
PHE
205
n
205
PHE
205
A
LYS
206
n
206
LYS
206
A
ILE
207
n
207
ILE
207
A
VAL
208
n
208
VAL
208
A
ASP
209
n
209
ASP
209
A
GLU
210
n
210
GLU
210
A
VAL
211
n
211
VAL
211
A
ASP
212
n
212
ASP
212
A
ILE
213
n
213
ILE
213
A
GLU
214
n
214
GLU
214
A
PRO
215
n
215
PRO
215
A
PHE
216
n
216
PHE
216
A
GLU
217
n
217
GLU
217
A
LYS
218
n
218
LYS
218
A
ASP
219
n
219
ASP
219
A
HIS
220
n
220
HIS
220
A
VAL
221
n
221
VAL
221
A
MET
222
n
222
MET
222
A
PHE
223
n
223
PHE
223
A
VAL
224
n
224
VAL
224
A
GLY
225
n
225
GLY
225
A
ILE
226
n
226
ILE
226
A
TRP
227
n
227
TRP
227
A
GLU
228
n
228
GLU
228
A
GLY
229
n
229
GLY
229
A
LYS
230
n
230
LYS
230
A
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
2_656
-x+1,y,-z+1
crystal symmetry operation
114.4443020331
0.0000000000
54.7879146983
A
N
ILE
9
A
N
ILE
9
A
O
ILE
13
A
O
ILE
13
A
N
VAL
16
A
N
VAL
16
A
O
ARG
24
A
O
ARG
24
A
O
THR
27
A
O
THR
27
A
N
ARG
50
A
N
ARG
50
A
N
TYR
49
A
N
TYR
49
A
O
ILE
42
A
O
ILE
42
A
N
ILE
125
A
N
ILE
125
A
O
VAL
101
A
O
VAL
101
A
N
TYR
102
A
N
TYR
102
A
O
ILE
78
A
O
ILE
78
A
O
LYS
77
A
O
LYS
77
A
N
ASP
145
A
N
ASP
145
A
O
VAL
144
A
O
VAL
144
A
N
LYS
169
A
N
LYS
169
A
N
ILE
178
A
N
ILE
178
A
O
VAL
221
A
O
VAL
221
A
N
ILE
226
A
N
ILE
226
A
O
LYS
206
A
O
LYS
206
1
A
PHE
10
49.79
-126.22
1
A
THR
87
-53.10
-70.83
1
A
GLU
120
88.73
-15.76
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
WATER.TOP
27.8
-4.57
0.00
-3.37
4.80
0.00
-0.22
Probe program was used to identify residues incorrectly refined by CNS
0.213
0.004
0.201
0.202
0.2016
1.60
40
3409
71996
68772
5.0
93.8
RANDOM
966006.53
0.00
1
RESTRAINED
THROUGHOUT
0.001
0.001
MAD
1FBN
FLAT MODEL
55.73
0.377
0.22
0.20
5.00
0.23
0.22
1.60
40
140
1978
9
0
1829
0.008
1.3
25.1
0.78
1.89
1.50
2.95
2.00
3.41
2.00
5.28
2.50
0.311
0.014
0.309
1.70
465
9632
10097
6
4.6
83
22.8
1.6
40
1G8S
71996
68772
0
0
0.076
1
2
97
0.4
1.6
1.7
2
95.8
data reduction
DENZO
SUITE
data scaling
SCALEPACK
SUITE
refinement
CNS
1.0
METHANOCOCCUS JANNASCHII FIBRILLARIN PRE-RRNA PROCESSING PROTEIN
1
N
N
2
N
N
3
N
N
A
SER
57
A
SER
57
HELX_P
A
LYS
65
A
LYS
65
1
1
9
A
GLY
86
A
GLY
86
HELX_P
A
ALA
96
A
ALA
96
1
2
11
A
ALA
107
A
ALA
107
HELX_P
A
CYS
118
A
CYS
118
1
3
12
A
LYS
133
A
LYS
133
HELX_P
A
ALA
138
A
ALA
138
5
4
6
A
ASN
155
A
ASN
155
HELX_P
A
PHE
167
A
PHE
167
1
5
13
A
ARG
181
A
ARG
181
HELX_P
A
ILE
183
A
ILE
183
5
6
3
A
ASP
188
A
ASP
188
HELX_P
A
GLY
204
A
GLY
204
1
7
17
RNA BINDING PROTEIN
rRNA processing; RNA binding, RNA BINDING PROTEIN
A
GLU
214
A
GLU
214
1
A
PRO
215
A
PRO
215
0.17
FLPA_METJA
UNP
1
1
Q58108
MEDIKIKEIFENIYEVDLGDGLKRIATKSIVKGKKVYDEKIIKIGDEEYRIWNPNKSKLAAAIIKGLKVMPIKRDSKILY
LGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYEDVAQPNQAEIL
IKNAKWFLKKGGYGMIAIKARSIDVTKDPKEIFKEQKEILEAGGFKIVDEVDIEPFEKDHVMFVGIWEGK
1
230
1G8S
1
230
Q58108
A
1
1
230
5
7
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
A
LYS
5
A
LYS
5
A
ILE
9
A
ILE
9
A
ILE
13
A
ILE
13
A
ASP
17
A
ASP
17
A
ARG
24
A
ARG
24
A
LYS
28
A
LYS
28
A
GLU
47
A
GLU
47
A
ILE
51
A
ILE
51
A
ILE
41
A
ILE
41
A
ILE
44
A
ILE
44
A
ILE
124
A
ILE
124
A
LEU
128
A
LEU
128
A
ILE
100
A
ILE
100
A
GLU
105
A
GLU
105
A
LYS
77
A
LYS
77
A
LEU
81
A
LEU
81
A
VAL
144
A
VAL
144
A
GLU
149
A
GLU
149
A
LEU
168
A
LEU
168
A
LYS
179
A
LYS
179
A
HIS
220
A
HIS
220
A
TRP
227
A
TRP
227
A
PHE
205
A
PHE
205
A
ASP
212
A
ASP
212
BINDING SITE FOR RESIDUE MET A 500
A
MET
500
Software
11
A
LYS
56
A
LYS
56
11
1_555
A
LYS
58
A
LYS
58
11
1_555
A
TYR
80
A
TYR
80
11
1_555
A
SER
84
A
SER
84
11
1_555
A
ALA
85
A
ALA
85
11
1_555
A
THR
87
A
THR
87
11
1_555
A
THR
88
A
THR
88
11
1_555
A
PRO
89
A
PRO
89
11
1_555
A
ASP
150
A
ASP
150
11
1_555
A
HOH
517
C
HOH
11
1_555
A
HOH
525
C
HOH
11
1_555
5
C 1 2 1