0.009107
0.005258
0.000000
0.000000
0.010516
0.000000
0.000000
0.000000
0.007704
0.00000
0.00000
0.00000
Ito, S.
Fushinobu, S.
Yoshioka, I.
Koga, S.
Matsuzawa, H.
Wakagi, T.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90
90
120
109.8
109.8
129.8
C10 H15 N5 O10 P2
427.201
n
ADENOSINE-5'-DIPHOSPHATE
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
P
N
2
N
O
N
3
N
O
N
4
N
O
N
5
S
P
N
6
N
O
N
7
N
O
N
8
N
O
N
9
N
O
N
10
N
C
N
11
R
C
N
12
N
O
N
13
S
C
N
14
N
O
N
15
R
C
N
16
N
O
N
17
R
C
Y
18
N
N
Y
19
N
C
Y
20
N
N
Y
21
N
C
Y
22
N
C
N
23
N
N
Y
24
N
N
Y
25
N
C
Y
26
N
N
Y
27
N
C
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
N
N
44
S
C
N
45
N
C
N
46
N
O
N
47
N
C
N
48
N
O
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
N
N
57
S
C
N
58
N
C
N
59
N
O
N
60
N
C
N
61
N
C
N
62
N
C
N
63
N
N
N
64
N
C
N
65
N
N
N
66
N
N
N
67
N
O
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
N
N
84
S
C
N
85
N
C
N
86
N
O
N
87
N
C
N
88
N
C
N
89
N
O
N
90
N
N
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
N
N
101
S
C
N
102
N
C
N
103
N
O
N
104
N
C
N
105
N
C
N
106
N
O
N
107
N
O
N
108
N
O
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
N
N
117
S
C
N
118
N
C
N
119
N
O
N
120
N
C
N
121
N
C
N
122
N
C
N
123
N
O
N
124
N
N
N
125
N
O
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
N
N
137
S
C
N
138
N
C
N
139
N
O
N
140
N
C
N
141
N
C
N
142
N
C
N
143
N
O
N
144
N
O
N
145
N
O
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
N
N
156
N
C
N
157
N
C
N
158
N
O
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
N
N
166
S
C
N
167
N
C
N
168
N
O
N
169
N
C
Y
170
N
C
Y
171
N
N
Y
172
N
C
Y
173
N
C
Y
174
N
N
N
175
N
O
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
O
N
187
N
H
N
188
N
H
N
189
N
N
N
190
S
C
N
191
N
C
N
192
N
O
N
193
S
C
N
194
N
C
N
195
N
C
N
196
N
C
N
197
N
O
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
N
N
212
S
C
N
213
N
C
N
214
N
O
N
215
N
C
N
216
N
C
N
217
N
C
N
218
N
C
N
219
N
O
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
N
N
234
S
C
N
235
N
C
N
236
N
O
N
237
N
C
N
238
N
C
N
239
N
C
N
240
N
C
N
241
N
N
N
242
N
O
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
N
N
259
S
C
N
260
N
C
N
261
N
O
N
262
N
C
N
263
N
C
N
264
N
S
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
N
N
279
S
C
N
280
N
C
N
281
N
O
N
282
N
C
Y
283
N
C
Y
284
N
C
Y
285
N
C
Y
286
N
C
Y
287
N
C
Y
288
N
C
N
289
N
O
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
N
C
N
306
N
C
N
307
N
C
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
N
323
N
O
N
324
N
O
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
N
N
333
S
C
N
334
N
C
N
335
N
O
N
336
R
C
N
337
N
O
N
338
N
C
N
339
N
O
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
N
N
350
S
C
N
351
N
C
N
352
N
O
N
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
N
Y
358
N
C
Y
359
N
C
Y
360
N
C
Y
361
N
C
Y
362
N
C
N
363
N
O
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
N
N
377
S
C
N
378
N
C
N
379
N
O
N
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
C
Y
385
N
C
Y
386
N
C
N
387
N
O
N
388
N
O
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
N
N
401
S
C
N
402
N
C
N
403
N
O
N
404
N
C
N
405
N
C
N
406
N
C
N
407
N
O
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
Y
30
N
sing
Y
31
N
sing
Y
32
N
doub
N
33
N
sing
Y
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
doub
N
39
N
sing
N
40
N
sing
Y
41
N
sing
Y
42
N
doub
N
43
N
sing
Y
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
doub
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
doub
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
doub
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
doub
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
Y
171
N
sing
Y
172
N
doub
Y
173
N
doub
N
174
N
sing
Y
175
N
sing
N
176
N
sing
Y
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
doub
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
doub
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
doub
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
doub
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
doub
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
Y
279
N
doub
Y
280
N
sing
Y
281
N
sing
N
282
N
sing
Y
283
N
doub
N
284
N
sing
Y
285
N
doub
N
286
N
sing
Y
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
doub
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
doub
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
doub
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
Y
348
N
doub
Y
349
N
sing
Y
350
N
sing
N
351
N
sing
Y
352
N
doub
Y
353
N
sing
Y
354
N
sing
N
355
N
sing
Y
356
N
sing
Y
357
N
doub
N
358
N
sing
Y
359
N
doub
N
360
N
sing
Y
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
doub
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
Y
376
N
doub
Y
377
N
sing
Y
378
N
sing
N
379
N
sing
Y
380
N
doub
N
381
N
sing
Y
382
N
doub
N
383
N
sing
Y
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
doub
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
UK
Structure
STRUE6
2005
0969-2126
9
205
214
10.1016/S0969-2126(01)00577-9
11286887
Structural Basis for the ADP-Specificity of a Novel Glucokinase from a Hyperthermophilic Archaeon
2001
10.2210/pdb1gc5/pdb
pdb_00001gc5
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
286
1
DIFFRACTOMETER
1999-01-01
WEISSENBERG
SINGLE WAVELENGTH
M
x-ray
1
1.0000
1.0
BL-6A
Photon Factory
1.0000
SYNCHROTRON
PHOTON FACTORY BEAMLINE BL-6A
53618.086
ADP-DEPENDENT GLUCOKINASE
2.7.1.147
1
man
polymer
427.201
ADENOSINE-5'-DIPHOSPHATE
1
syn
non-polymer
18.015
water
77
nat
water
no
no
MKESLKDRIRLWKRLYVNAFENALNAIPNVKGVLLAYNTNIDAIKYLDADDLEKRVTEKGKEKVFEIIENPPEKISSIEE
LLGGILRSIKLGKAMEWFVESEEVRRYLREWGWDELRIGGQAGIMANLLGGVYRIPTIVHVPQNPKLQAELFVDGPIYVP
VFEGNKLKLVHPKDAIAEEEELIHYIYEFPRGFQVFDVQAPRENRFIANADDYNARVYMRREFREGFEEITRNVELAIIS
GLQVLKEYYPDGTTYKDVLDRVESHLNILNRYNVKSHFEFAYTANRRVREALVELLPKFTSVGLNEVELASIMEIIGDEE
LAKEVLEGHIFSVIDAMNVLMDETGIERIHFHTYGYYLALTQYRGEEVRDALLFASLAAAAKAMKGNLERIEQIRDALSV
PTNERAIVLEEELEKEFTEFENGLIDMVDRQLAFVPTKIVASPKSTVGIGDTISSSAFVSEFGMRKR
MKESLKDRIRLWKRLYVNAFENALNAIPNVKGVLLAYNTNIDAIKYLDADDLEKRVTEKGKEKVFEIIENPPEKISSIEE
LLGGILRSIKLGKAMEWFVESEEVRRYLREWGWDELRIGGQAGIMANLLGGVYRIPTIVHVPQNPKLQAELFVDGPIYVP
VFEGNKLKLVHPKDAIAEEEELIHYIYEFPRGFQVFDVQAPRENRFIANADDYNARVYMRREFREGFEEITRNVELAIIS
GLQVLKEYYPDGTTYKDVLDRVESHLNILNRYNVKSHFEFAYTANRRVREALVELLPKFTSVGLNEVELASIMEIIGDEE
LAKEVLEGHIFSVIDAMNVLMDETGIERIHFHTYGYYLALTQYRGEEVRDALLFASLAAAAKAMKGNLERIEQIRDALSV
PTNERAIVLEEELEKEFTEFENGLIDMVDRQLAFVPTKIVASPKSTVGIGDTISSSAFVSEFGMRKR
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Thermococcus
Escherichia
sample
2265
Thermococcus litoralis
562
Escherichia coli
PLASMID
1
4.21
70.79
VAPOR DIFFUSION, HANGING DROP
4.8
potassium chloride, citrate, pH 4.8, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
chem_comp_atom
chem_comp_bond
database_2
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2001-07-25
1
1
2008-04-27
1
2
2011-07-13
1
3
2023-12-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2000-07-20
REL
REL
ADP
ADENOSINE-5'-DIPHOSPHATE
HOH
water
ADP
470
2
ADP
ADP
470
A
WAT
501
3
HOH
HOH
501
A
WAT
502
3
HOH
HOH
502
A
WAT
503
3
HOH
HOH
503
A
WAT
504
3
HOH
HOH
504
A
WAT
505
3
HOH
HOH
505
A
WAT
506
3
HOH
HOH
506
A
WAT
507
3
HOH
HOH
507
A
WAT
508
3
HOH
HOH
508
A
WAT
509
3
HOH
HOH
509
A
WAT
510
3
HOH
HOH
510
A
WAT
511
3
HOH
HOH
511
A
WAT
512
3
HOH
HOH
512
A
WAT
513
3
HOH
HOH
513
A
WAT
514
3
HOH
HOH
514
A
WAT
515
3
HOH
HOH
515
A
WAT
516
3
HOH
HOH
516
A
WAT
517
3
HOH
HOH
517
A
WAT
518
3
HOH
HOH
518
A
WAT
519
3
HOH
HOH
519
A
WAT
520
3
HOH
HOH
520
A
WAT
521
3
HOH
HOH
521
A
WAT
522
3
HOH
HOH
522
A
WAT
523
3
HOH
HOH
523
A
WAT
524
3
HOH
HOH
524
A
WAT
525
3
HOH
HOH
525
A
WAT
526
3
HOH
HOH
526
A
WAT
527
3
HOH
HOH
527
A
WAT
528
3
HOH
HOH
528
A
WAT
529
3
HOH
HOH
529
A
WAT
530
3
HOH
HOH
530
A
WAT
531
3
HOH
HOH
531
A
WAT
532
3
HOH
HOH
532
A
WAT
533
3
HOH
HOH
533
A
WAT
534
3
HOH
HOH
534
A
WAT
535
3
HOH
HOH
535
A
WAT
536
3
HOH
HOH
536
A
WAT
537
3
HOH
HOH
537
A
WAT
538
3
HOH
HOH
538
A
WAT
539
3
HOH
HOH
539
A
WAT
540
3
HOH
HOH
540
A
WAT
541
3
HOH
HOH
541
A
WAT
542
3
HOH
HOH
542
A
WAT
543
3
HOH
HOH
543
A
WAT
544
3
HOH
HOH
544
A
WAT
545
3
HOH
HOH
545
A
WAT
546
3
HOH
HOH
546
A
WAT
547
3
HOH
HOH
547
A
WAT
548
3
HOH
HOH
548
A
WAT
550
3
HOH
HOH
550
A
WAT
551
3
HOH
HOH
551
A
WAT
552
3
HOH
HOH
552
A
WAT
553
3
HOH
HOH
553
A
WAT
554
3
HOH
HOH
554
A
WAT
555
3
HOH
HOH
555
A
WAT
556
3
HOH
HOH
556
A
WAT
557
3
HOH
HOH
557
A
WAT
558
3
HOH
HOH
558
A
WAT
559
3
HOH
HOH
559
A
WAT
560
3
HOH
HOH
560
A
WAT
561
3
HOH
HOH
561
A
WAT
562
3
HOH
HOH
562
A
WAT
563
3
HOH
HOH
563
A
WAT
564
3
HOH
HOH
564
A
WAT
565
3
HOH
HOH
565
A
WAT
566
3
HOH
HOH
566
A
WAT
567
3
HOH
HOH
567
A
WAT
568
3
HOH
HOH
568
A
WAT
569
3
HOH
HOH
569
A
WAT
570
3
HOH
HOH
570
A
WAT
571
3
HOH
HOH
571
A
WAT
572
3
HOH
HOH
572
A
WAT
573
3
HOH
HOH
573
A
WAT
574
3
HOH
HOH
574
A
WAT
575
3
HOH
HOH
575
A
WAT
576
3
HOH
HOH
576
A
WAT
577
3
HOH
HOH
577
A
WAT
548
3
HOH
HOH
1548
A
MET
1
n
1
MET
1
A
LYS
2
n
2
LYS
2
A
GLU
3
n
3
GLU
3
A
SER
4
n
4
SER
4
A
LEU
5
n
5
LEU
5
A
LYS
6
n
6
LYS
6
A
ASP
7
n
7
ASP
7
A
ARG
8
n
8
ARG
8
A
ILE
9
n
9
ILE
9
A
ARG
10
n
10
ARG
10
A
LEU
11
n
11
LEU
11
A
TRP
12
n
12
TRP
12
A
LYS
13
n
13
LYS
13
A
ARG
14
n
14
ARG
14
A
LEU
15
n
15
LEU
15
A
TYR
16
n
16
TYR
16
A
VAL
17
n
17
VAL
17
A
ASN
18
n
18
ASN
18
A
ALA
19
n
19
ALA
19
A
PHE
20
n
20
PHE
20
A
GLU
21
n
21
GLU
21
A
ASN
22
n
22
ASN
22
A
ALA
23
n
23
ALA
23
A
LEU
24
n
24
LEU
24
A
ASN
25
n
25
ASN
25
A
ALA
26
n
26
ALA
26
A
ILE
27
n
27
ILE
27
A
PRO
28
n
28
PRO
28
A
ASN
29
n
29
ASN
29
A
VAL
30
n
30
VAL
30
A
LYS
31
n
31
LYS
31
A
GLY
32
n
32
GLY
32
A
VAL
33
n
33
VAL
33
A
LEU
34
n
34
LEU
34
A
LEU
35
n
35
LEU
35
A
ALA
36
n
36
ALA
36
A
TYR
37
n
37
TYR
37
A
ASN
38
n
38
ASN
38
A
THR
39
n
39
THR
39
A
ASN
40
n
40
ASN
40
A
ILE
41
n
41
ILE
41
A
ASP
42
n
42
ASP
42
A
ALA
43
n
43
ALA
43
A
ILE
44
n
44
ILE
44
A
LYS
45
n
45
LYS
45
A
TYR
46
n
46
TYR
46
A
LEU
47
n
47
LEU
47
A
ASP
48
n
48
ASP
48
A
ALA
49
n
49
ALA
49
A
ASP
50
n
50
ASP
50
A
ASP
51
n
51
ASP
51
A
LEU
52
n
52
LEU
52
A
GLU
53
n
53
GLU
53
A
LYS
54
n
54
LYS
54
A
ARG
55
n
55
ARG
55
A
VAL
56
n
56
VAL
56
A
THR
57
n
57
THR
57
A
GLU
58
n
58
GLU
58
A
LYS
59
n
59
LYS
59
A
GLY
60
n
60
GLY
60
A
LYS
61
n
61
LYS
61
A
GLU
62
n
62
GLU
62
A
LYS
63
n
63
LYS
63
A
VAL
64
n
64
VAL
64
A
PHE
65
n
65
PHE
65
A
GLU
66
n
66
GLU
66
A
ILE
67
n
67
ILE
67
A
ILE
68
n
68
ILE
68
A
GLU
69
n
69
GLU
69
A
ASN
70
n
70
ASN
70
A
PRO
71
n
71
PRO
71
A
PRO
72
n
72
PRO
72
A
GLU
73
n
73
GLU
73
A
LYS
74
n
74
LYS
74
A
ILE
75
n
75
ILE
75
A
SER
76
n
76
SER
76
A
SER
77
n
77
SER
77
A
ILE
78
n
78
ILE
78
A
GLU
79
n
79
GLU
79
A
GLU
80
n
80
GLU
80
A
LEU
81
n
81
LEU
81
A
LEU
82
n
82
LEU
82
A
GLY
83
n
83
GLY
83
A
GLY
84
n
84
GLY
84
A
ILE
85
n
85
ILE
85
A
LEU
86
n
86
LEU
86
A
ARG
87
n
87
ARG
87
A
SER
88
n
88
SER
88
A
ILE
89
n
89
ILE
89
A
LYS
90
n
90
LYS
90
A
LEU
91
n
91
LEU
91
A
GLY
92
n
92
GLY
92
A
LYS
93
n
93
LYS
93
A
ALA
94
n
94
ALA
94
A
MET
95
n
95
MET
95
A
GLU
96
n
96
GLU
96
A
TRP
97
n
97
TRP
97
A
PHE
98
n
98
PHE
98
A
VAL
99
n
99
VAL
99
A
GLU
100
n
100
GLU
100
A
SER
101
n
101
SER
101
A
GLU
102
n
102
GLU
102
A
GLU
103
n
103
GLU
103
A
VAL
104
n
104
VAL
104
A
ARG
105
n
105
ARG
105
A
ARG
106
n
106
ARG
106
A
TYR
107
n
107
TYR
107
A
LEU
108
n
108
LEU
108
A
ARG
109
n
109
ARG
109
A
GLU
110
n
110
GLU
110
A
TRP
111
n
111
TRP
111
A
GLY
112
n
112
GLY
112
A
TRP
113
n
113
TRP
113
A
ASP
114
n
114
ASP
114
A
GLU
115
n
115
GLU
115
A
LEU
116
n
116
LEU
116
A
ARG
117
n
117
ARG
117
A
ILE
118
n
118
ILE
118
A
GLY
119
n
119
GLY
119
A
GLY
120
n
120
GLY
120
A
GLN
121
n
121
GLN
121
A
ALA
122
n
122
ALA
122
A
GLY
123
n
123
GLY
123
A
ILE
124
n
124
ILE
124
A
MET
125
n
125
MET
125
A
ALA
126
n
126
ALA
126
A
ASN
127
n
127
ASN
127
A
LEU
128
n
128
LEU
128
A
LEU
129
n
129
LEU
129
A
GLY
130
n
130
GLY
130
A
GLY
131
n
131
GLY
131
A
VAL
132
n
132
VAL
132
A
TYR
133
n
133
TYR
133
A
ARG
134
n
134
ARG
134
A
ILE
135
n
135
ILE
135
A
PRO
136
n
136
PRO
136
A
THR
137
n
137
THR
137
A
ILE
138
n
138
ILE
138
A
VAL
139
n
139
VAL
139
A
HIS
140
n
140
HIS
140
A
VAL
141
n
141
VAL
141
A
PRO
142
n
142
PRO
142
A
GLN
143
n
143
GLN
143
A
ASN
144
n
144
ASN
144
A
PRO
145
n
145
PRO
145
A
LYS
146
n
146
LYS
146
A
LEU
147
n
147
LEU
147
A
GLN
148
n
148
GLN
148
A
ALA
149
n
149
ALA
149
A
GLU
150
n
150
GLU
150
A
LEU
151
n
151
LEU
151
A
PHE
152
n
152
PHE
152
A
VAL
153
n
153
VAL
153
A
ASP
154
n
154
ASP
154
A
GLY
155
n
155
GLY
155
A
PRO
156
n
156
PRO
156
A
ILE
157
n
157
ILE
157
A
TYR
158
n
158
TYR
158
A
VAL
159
n
159
VAL
159
A
PRO
160
n
160
PRO
160
A
VAL
161
n
161
VAL
161
A
PHE
162
n
162
PHE
162
A
GLU
163
n
163
GLU
163
A
GLY
164
n
164
GLY
164
A
ASN
165
n
165
ASN
165
A
LYS
166
n
166
LYS
166
A
LEU
167
n
167
LEU
167
A
LYS
168
n
168
LYS
168
A
LEU
169
n
169
LEU
169
A
VAL
170
n
170
VAL
170
A
HIS
171
n
171
HIS
171
A
PRO
172
n
172
PRO
172
A
LYS
173
n
173
LYS
173
A
ASP
174
n
174
ASP
174
A
ALA
175
n
175
ALA
175
A
ILE
176
n
176
ILE
176
A
ALA
177
n
177
ALA
177
A
GLU
178
n
178
GLU
178
A
GLU
179
n
179
GLU
179
A
GLU
180
n
180
GLU
180
A
GLU
181
n
181
GLU
181
A
LEU
182
n
182
LEU
182
A
ILE
183
n
183
ILE
183
A
HIS
184
n
184
HIS
184
A
TYR
185
n
185
TYR
185
A
ILE
186
n
186
ILE
186
A
TYR
187
n
187
TYR
187
A
GLU
188
n
188
GLU
188
A
PHE
189
n
189
PHE
189
A
PRO
190
n
190
PRO
190
A
ARG
191
n
191
ARG
191
A
GLY
192
n
192
GLY
192
A
PHE
193
n
193
PHE
193
A
GLN
194
n
194
GLN
194
A
VAL
195
n
195
VAL
195
A
PHE
196
n
196
PHE
196
A
ASP
197
n
197
ASP
197
A
VAL
198
n
198
VAL
198
A
GLN
199
n
199
GLN
199
A
ALA
200
n
200
ALA
200
A
PRO
201
n
201
PRO
201
A
ARG
202
n
202
ARG
202
A
GLU
203
n
203
GLU
203
A
ASN
204
n
204
ASN
204
A
ARG
205
n
205
ARG
205
A
PHE
206
n
206
PHE
206
A
ILE
207
n
207
ILE
207
A
ALA
208
n
208
ALA
208
A
ASN
209
n
209
ASN
209
A
ALA
210
n
210
ALA
210
A
ASP
211
n
211
ASP
211
A
ASP
212
n
212
ASP
212
A
TYR
213
n
213
TYR
213
A
ASN
214
n
214
ASN
214
A
ALA
215
n
215
ALA
215
A
ARG
216
n
216
ARG
216
A
VAL
217
n
217
VAL
217
A
TYR
218
n
218
TYR
218
A
MET
219
n
219
MET
219
A
ARG
220
n
220
ARG
220
A
ARG
221
n
221
ARG
221
A
GLU
222
n
222
GLU
222
A
PHE
223
n
223
PHE
223
A
ARG
224
n
224
ARG
224
A
GLU
225
n
225
GLU
225
A
GLY
226
n
226
GLY
226
A
PHE
227
n
227
PHE
227
A
GLU
228
n
228
GLU
228
A
GLU
229
n
229
GLU
229
A
ILE
230
n
230
ILE
230
A
THR
231
n
231
THR
231
A
ARG
232
n
232
ARG
232
A
ASN
233
n
233
ASN
233
A
VAL
234
n
234
VAL
234
A
GLU
235
n
235
GLU
235
A
LEU
236
n
236
LEU
236
A
ALA
237
n
237
ALA
237
A
ILE
238
n
238
ILE
238
A
ILE
239
n
239
ILE
239
A
SER
240
n
240
SER
240
A
GLY
241
n
241
GLY
241
A
LEU
242
n
242
LEU
242
A
GLN
243
n
243
GLN
243
A
VAL
244
n
244
VAL
244
A
LEU
245
n
245
LEU
245
A
LYS
246
n
246
LYS
246
A
GLU
247
n
247
GLU
247
A
TYR
248
n
248
TYR
248
A
TYR
249
n
249
TYR
249
A
PRO
250
n
250
PRO
250
A
ASP
251
n
251
ASP
251
A
GLY
252
n
252
GLY
252
A
THR
253
n
253
THR
253
A
THR
254
n
254
THR
254
A
TYR
255
n
255
TYR
255
A
LYS
256
n
256
LYS
256
A
ASP
257
n
257
ASP
257
A
VAL
258
n
258
VAL
258
A
LEU
259
n
259
LEU
259
A
ASP
260
n
260
ASP
260
A
ARG
261
n
261
ARG
261
A
VAL
262
n
262
VAL
262
A
GLU
263
n
263
GLU
263
A
SER
264
n
264
SER
264
A
HIS
265
n
265
HIS
265
A
LEU
266
n
266
LEU
266
A
ASN
267
n
267
ASN
267
A
ILE
268
n
268
ILE
268
A
LEU
269
n
269
LEU
269
A
ASN
270
n
270
ASN
270
A
ARG
271
n
271
ARG
271
A
TYR
272
n
272
TYR
272
A
ASN
273
n
273
ASN
273
A
VAL
274
n
274
VAL
274
A
LYS
275
n
275
LYS
275
A
SER
276
n
276
SER
276
A
HIS
277
n
277
HIS
277
A
PHE
278
n
278
PHE
278
A
GLU
279
n
279
GLU
279
A
PHE
280
n
280
PHE
280
A
ALA
281
n
281
ALA
281
A
TYR
282
n
282
TYR
282
A
THR
283
n
283
THR
283
A
ALA
284
n
284
ALA
284
A
ASN
285
n
285
ASN
285
A
ARG
286
n
286
ARG
286
A
ARG
287
n
287
ARG
287
A
VAL
288
n
288
VAL
288
A
ARG
289
n
289
ARG
289
A
GLU
290
n
290
GLU
290
A
ALA
291
n
291
ALA
291
A
LEU
292
n
292
LEU
292
A
VAL
293
n
293
VAL
293
A
GLU
294
n
294
GLU
294
A
LEU
295
n
295
LEU
295
A
LEU
296
n
296
LEU
296
A
PRO
297
n
297
PRO
297
A
LYS
298
n
298
LYS
298
A
PHE
299
n
299
PHE
299
A
THR
300
n
300
THR
300
A
SER
301
n
301
SER
301
A
VAL
302
n
302
VAL
302
A
GLY
303
n
303
GLY
303
A
LEU
304
n
304
LEU
304
A
ASN
305
n
305
ASN
305
A
GLU
306
n
306
GLU
306
A
VAL
307
n
307
VAL
307
A
GLU
308
n
308
GLU
308
A
LEU
309
n
309
LEU
309
A
ALA
310
n
310
ALA
310
A
SER
311
n
311
SER
311
A
ILE
312
n
312
ILE
312
A
MET
313
n
313
MET
313
A
GLU
314
n
314
GLU
314
A
ILE
315
n
315
ILE
315
A
ILE
316
n
316
ILE
316
A
GLY
317
n
317
GLY
317
A
ASP
318
n
318
ASP
318
A
GLU
319
n
319
GLU
319
A
GLU
320
n
320
GLU
320
A
LEU
321
n
321
LEU
321
A
ALA
322
n
322
ALA
322
A
LYS
323
n
323
LYS
323
A
GLU
324
n
324
GLU
324
A
VAL
325
n
325
VAL
325
A
LEU
326
n
326
LEU
326
A
GLU
327
n
327
GLU
327
A
GLY
328
n
328
GLY
328
A
HIS
329
n
329
HIS
329
A
ILE
330
n
330
ILE
330
A
PHE
331
n
331
PHE
331
A
SER
332
n
332
SER
332
A
VAL
333
n
333
VAL
333
A
ILE
334
n
334
ILE
334
A
ASP
335
n
335
ASP
335
A
ALA
336
n
336
ALA
336
A
MET
337
n
337
MET
337
A
ASN
338
n
338
ASN
338
A
VAL
339
n
339
VAL
339
A
LEU
340
n
340
LEU
340
A
MET
341
n
341
MET
341
A
ASP
342
n
342
ASP
342
A
GLU
343
n
343
GLU
343
A
THR
344
n
344
THR
344
A
GLY
345
n
345
GLY
345
A
ILE
346
n
346
ILE
346
A
GLU
347
n
347
GLU
347
A
ARG
348
n
348
ARG
348
A
ILE
349
n
349
ILE
349
A
HIS
350
n
350
HIS
350
A
PHE
351
n
351
PHE
351
A
HIS
352
n
352
HIS
352
A
THR
353
n
353
THR
353
A
TYR
354
n
354
TYR
354
A
GLY
355
n
355
GLY
355
A
TYR
356
n
356
TYR
356
A
TYR
357
n
357
TYR
357
A
LEU
358
n
358
LEU
358
A
ALA
359
n
359
ALA
359
A
LEU
360
n
360
LEU
360
A
THR
361
n
361
THR
361
A
GLN
362
n
362
GLN
362
A
TYR
363
n
363
TYR
363
A
ARG
364
n
364
ARG
364
A
GLY
365
n
365
GLY
365
A
GLU
366
n
366
GLU
366
A
GLU
367
n
367
GLU
367
A
VAL
368
n
368
VAL
368
A
ARG
369
n
369
ARG
369
A
ASP
370
n
370
ASP
370
A
ALA
371
n
371
ALA
371
A
LEU
372
n
372
LEU
372
A
LEU
373
n
373
LEU
373
A
PHE
374
n
374
PHE
374
A
ALA
375
n
375
ALA
375
A
SER
376
n
376
SER
376
A
LEU
377
n
377
LEU
377
A
ALA
378
n
378
ALA
378
A
ALA
379
n
379
ALA
379
A
ALA
380
n
380
ALA
380
A
ALA
381
n
381
ALA
381
A
LYS
382
n
382
LYS
382
A
ALA
383
n
383
ALA
383
A
MET
384
n
384
MET
384
A
LYS
385
n
385
LYS
385
A
GLY
386
n
386
GLY
386
A
ASN
387
n
387
ASN
387
A
LEU
388
n
388
LEU
388
A
GLU
389
n
389
GLU
389
A
ARG
390
n
390
ARG
390
A
ILE
391
n
391
ILE
391
A
GLU
392
n
392
GLU
392
A
GLN
393
n
393
GLN
393
A
ILE
394
n
394
ILE
394
A
ARG
395
n
395
ARG
395
A
ASP
396
n
396
ASP
396
A
ALA
397
n
397
ALA
397
A
LEU
398
n
398
LEU
398
A
SER
399
n
399
SER
399
A
VAL
400
n
400
VAL
400
A
PRO
401
n
401
PRO
401
A
THR
402
n
402
THR
402
A
ASN
403
n
403
ASN
403
A
GLU
404
n
404
GLU
404
A
ARG
405
n
405
ARG
405
A
ALA
406
n
406
ALA
406
A
ILE
407
n
407
ILE
407
A
VAL
408
n
408
VAL
408
A
LEU
409
n
409
LEU
409
A
GLU
410
n
410
GLU
410
A
GLU
411
n
411
GLU
411
A
GLU
412
n
412
GLU
412
A
LEU
413
n
413
LEU
413
A
GLU
414
n
414
GLU
414
A
LYS
415
n
415
LYS
415
A
GLU
416
n
416
GLU
416
A
PHE
417
n
417
PHE
417
A
THR
418
n
418
THR
418
A
GLU
419
n
419
GLU
419
A
PHE
420
n
420
PHE
420
A
GLU
421
n
421
GLU
421
A
ASN
422
n
422
ASN
422
A
GLY
423
n
423
GLY
423
A
LEU
424
n
424
LEU
424
A
ILE
425
n
425
ILE
425
A
ASP
426
n
426
ASP
426
A
MET
427
n
427
MET
427
A
VAL
428
n
428
VAL
428
A
ASP
429
n
429
ASP
429
A
ARG
430
n
430
ARG
430
A
GLN
431
n
431
GLN
431
A
LEU
432
n
432
LEU
432
A
ALA
433
n
433
ALA
433
A
PHE
434
n
434
PHE
434
A
VAL
435
n
435
VAL
435
A
PRO
436
n
436
PRO
436
A
THR
437
n
437
THR
437
A
LYS
438
n
438
LYS
438
A
ILE
439
n
439
ILE
439
A
VAL
440
n
440
VAL
440
A
ALA
441
n
441
ALA
441
A
SER
442
n
442
SER
442
A
PRO
443
n
443
PRO
443
A
LYS
444
n
444
LYS
444
A
SER
445
n
445
SER
445
A
THR
446
n
446
THR
446
A
VAL
447
n
447
VAL
447
A
GLY
448
n
448
GLY
448
A
ILE
449
n
449
ILE
449
A
GLY
450
n
450
GLY
450
A
ASP
451
n
451
ASP
451
A
THR
452
n
452
THR
452
A
ILE
453
n
453
ILE
453
A
SER
454
n
454
SER
454
A
SER
455
n
455
SER
455
A
SER
456
n
456
SER
456
A
ALA
457
n
457
ALA
457
A
PHE
458
n
458
PHE
458
A
VAL
459
n
459
VAL
459
A
SER
460
n
460
SER
460
A
GLU
461
n
461
GLU
461
A
PHE
462
n
462
PHE
462
A
GLY
463
n
463
GLY
463
A
MET
464
n
464
MET
464
A
ARG
465
n
465
ARG
465
A
LYS
466
n
466
LYS
466
A
ARG
467
n
467
ARG
467
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
VAL
170
A
O
VAL
170
A
N
VAL
159
A
N
VAL
159
A
N
TYR
158
A
N
TYR
158
A
O
THR
137
A
O
THR
137
A
N
ILE
138
A
N
ILE
138
A
O
VAL
33
A
O
VAL
33
A
N
LEU
34
A
N
LEU
34
A
O
LEU
236
A
O
LEU
236
A
N
ALA
237
A
N
ALA
237
A
O
LYS
275
A
O
LYS
275
A
O
SER
276
A
O
SER
276
A
N
SER
301
A
N
SER
301
A
N
VAL
302
A
N
VAL
302
A
O
ARG
348
A
O
ARG
348
A
N
THR
353
A
N
THR
353
A
O
TYR
356
A
O
TYR
356
A
O
THR
361
A
O
THR
361
A
N
GLN
431
A
N
GLN
431
A
O
LEU
432
A
O
LEU
432
A
N
ILE
425
A
N
ILE
425
A
N
ASP
426
A
N
ASP
426
A
O
THR
418
A
O
THR
418
A
N
MET
95
A
N
MET
95
A
O
ARG
205
A
O
ARG
205
A
N
ALA
208
A
N
ALA
208
A
O
TYR
185
A
O
TYR
185
A
N
HIS
184
A
N
HIS
184
A
O
ILE
41
A
O
ILE
41
A
N
ILE
44
A
N
ILE
44
A
O
GLU
115
A
O
GLU
115
A
N
VAL
195
A
N
VAL
195
A
O
VAL
198
A
O
VAL
198
1
A
PRO
28
-59.07
-9.41
1
A
TYR
37
85.65
-71.80
1
A
ASN
40
-161.29
-162.46
1
A
LYS
61
-57.92
15.49
1
A
GLU
62
-79.91
-77.92
1
A
ASN
70
-116.00
69.62
1
A
GLU
73
-67.04
-73.85
1
A
LYS
90
-61.15
-86.00
1
A
LEU
91
-49.45
-13.23
1
A
GLU
96
-163.72
113.04
1
A
PHE
196
48.60
-57.40
1
A
ASP
197
-164.32
-31.99
1
A
ASN
204
-128.80
-151.01
1
A
ASN
305
-110.35
-169.09
1
A
GLU
389
-144.73
-34.04
1
A
ASN
403
-54.91
103.26
1
A
SER
442
57.30
77.86
1
A
LYS
444
-77.65
-85.69
1
A
SER
445
-63.43
-83.34
0.2520000
0.2040000
2.3
6.0
1500
30940
RANDOM
1
2.0
Engh & Huber
2.3
6.0
77
3884
27
0
3780
1.414
0.008
33.3
2.2
50
1GC5
167633
46477
1.0
0.0430000
1
18.6
3.3
77
0.1770000
2.2
2.28
45.8
data reduction
DENZO
data scaling
SCALEPACK
phasing
MLPHARE
refinement
X-PLOR
3.851
CRYSTAL STRUCTURE OF A NOVEL ADP-DEPENDENT GLUCOKINASE FROM THERMOCOCCUS LITORALIS
1
N
N
2
N
N
3
N
N
The biological assembly is monomer.
A
SER
4
A
SER
4
HELX_P
A
ILE
27
A
ILE
27
1
1
24
A
PRO
28
A
PRO
28
HELX_P
A
VAL
30
A
VAL
30
5
2
3
A
ASP
48
A
ASP
48
HELX_P
A
GLY
60
A
GLY
60
1
3
13
A
GLY
60
A
GLY
60
HELX_P
A
ASN
70
A
ASN
70
1
4
11
A
SER
77
A
SER
77
HELX_P
A
LEU
91
A
LEU
91
1
5
15
A
SER
101
A
SER
101
HELX_P
A
GLY
112
A
GLY
112
1
6
12
A
GLY
120
A
GLY
120
HELX_P
A
VAL
132
A
VAL
132
1
7
13
A
PRO
145
A
PRO
145
HELX_P
A
GLU
150
A
GLU
150
1
8
6
A
HIS
171
A
HIS
171
HELX_P
A
ALA
175
A
ALA
175
5
9
5
A
ARG
220
A
ARG
220
HELX_P
A
GLY
226
A
GLY
226
1
10
7
A
GLY
226
A
GLY
226
HELX_P
A
ARG
232
A
ARG
232
1
11
7
A
GLY
241
A
GLY
241
HELX_P
A
LEU
245
A
LEU
245
5
12
5
A
THR
254
A
THR
254
HELX_P
A
TYR
272
A
TYR
272
1
13
19
A
ASN
285
A
ASN
285
HELX_P
A
LEU
296
A
LEU
296
1
14
12
A
PRO
297
A
PRO
297
HELX_P
A
PHE
299
A
PHE
299
5
15
3
A
ASN
305
A
ASN
305
HELX_P
A
ILE
316
A
ILE
316
1
16
12
A
ASP
318
A
ASP
318
HELX_P
A
GLU
327
A
GLU
327
1
17
10
A
HIS
329
A
HIS
329
HELX_P
A
GLY
345
A
GLY
345
1
18
17
A
GLU
366
A
GLU
366
HELX_P
A
GLY
386
A
GLY
386
1
19
21
A
GLU
392
A
GLU
392
HELX_P
A
VAL
400
A
VAL
400
5
20
9
A
ASN
403
A
ASN
403
HELX_P
A
PHE
417
A
PHE
417
1
21
15
A
GLY
448
A
GLY
448
HELX_P
A
LYS
466
A
LYS
466
1
22
19
TRANSFERASE
ALFA/BETA SANDWICHS, INDUCED-FITTING, TRANSFERASE
GLKA_THELI
UNP
1
1
Q7M537
1
467
1GC5
1
467
Q7M537
A
1
1
467
12
5
2
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
LEU
167
A
LEU
167
A
VAL
170
A
VAL
170
A
ILE
157
A
ILE
157
A
PHE
162
A
PHE
162
A
THR
137
A
THR
137
A
VAL
139
A
VAL
139
A
VAL
33
A
VAL
33
A
ALA
36
A
ALA
36
A
LEU
236
A
LEU
236
A
ILE
239
A
ILE
239
A
LYS
275
A
LYS
275
A
GLU
279
A
GLU
279
A
SER
301
A
SER
301
A
LEU
304
A
LEU
304
A
ARG
348
A
ARG
348
A
THR
353
A
THR
353
A
TYR
356
A
TYR
356
A
THR
361
A
THR
361
A
GLN
431
A
GLN
431
A
PRO
436
A
PRO
436
A
LEU
424
A
LEU
424
A
ASP
426
A
ASP
426
A
THR
418
A
THR
418
A
GLU
421
A
GLU
421
A
MET
95
A
MET
95
A
PHE
98
A
PHE
98
A
ASN
204
A
ASN
204
A
ASN
209
A
ASN
209
A
ILE
183
A
ILE
183
A
PHE
189
A
PHE
189
A
ASN
40
A
ASN
40
A
TYR
46
A
TYR
46
A
GLU
115
A
GLU
115
A
GLY
119
A
GLY
119
A
GLN
194
A
GLN
194
A
VAL
195
A
VAL
195
A
VAL
198
A
VAL
198
A
GLN
199
A
GLN
199
BINDING SITE FOR RESIDUE ADP A 470
A
ADP
470
Software
10
A
ASN
305
A
ASN
305
10
1_555
A
HIS
352
A
HIS
352
10
1_555
A
THR
353
A
THR
353
10
1_555
A
LYS
438
A
LYS
438
10
1_555
A
VAL
440
A
VAL
440
10
1_555
A
PRO
443
A
PRO
443
10
1_555
A
ILE
449
A
ILE
449
10
1_555
A
GLY
450
A
GLY
450
10
1_555
A
ILE
453
A
ILE
453
10
1_555
A
HOH
555
C
HOH
10
1_555
154
P 32 2 1