0.017271
0.000000
0.000000
0.000000
0.012920
0.000000
0.000000
0.000000
0.018727
0.00000
0.00000
0.00000
Libson, A.M.
Gittis, A.G.
Collier, I.E.
Marmer, B.L.
Goldberg, G.G.
Lattman, E.E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
57.900
77.400
53.400
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
Cl -1
35.453
CHLORIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
2
938
942
10.1038/nsb1195-938
7583664
Crystal structure of the haemopexin-like C-terminal domain of gelatinase A.
1995
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
IMAGE PLATE
RIGAKU RAXIS
M
x-ray
1
1.5418
1.0
1.5418
24659.078
GELATINASE A
3.4.24.24
C-TERMINAL DOMAIN
1
man
polymer
65.409
ZINC ION
1
syn
non-polymer
40.078
CALCIUM ION
1
syn
non-polymer
35.453
CHLORIDE ION
1
syn
non-polymer
22.990
SODIUM ION
1
syn
non-polymer
18.015
water
51
nat
water
MMP-2, 72KD TYPE IV COLLAGENASE
no
no
ELYGASPDIDLGTGPTPTLGPVTPEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPMGPLLVATFWPELPEKIDA
VYEAPQEEKAVFFAGNEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGDKFWRYNEVKKKMDPGF
PKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQSLKSVKFGSIKSDWLGC
ELYGASPDIDLGTGPTPTLGPVTPEICKQDIVFDGIAQIRGEIFFFKDRFIWRTVTPRDKPMGPLLVATFWPELPEKIDA
VYEAPQEEKAVFFAGNEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGDKFWRYNEVKKKMDPGF
PKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKLENQSLKSVKFGSIKSDWLGC
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
HUMAN GELATINASE A
9606
Homo sapiens
HUMAN GELATINASE A
562
Escherichia coli
PFLAG1
2.42
40.
diffrn_detector
pdbx_database_status
repository
Initial release
Version format compliance
Version format compliance
Data collection
Other
1
0
1996-08-17
1
1
2008-03-24
1
2
2011-07-13
1
3
2018-03-21
_diffrn_detector.pdbx_collection_date
_pdbx_database_status.process_site
Y
BNL
1995-07-19
REL
REL
ZN
ZINC ION
CA
CALCIUM ION
CL
CHLORIDE ION
NA
SODIUM ION
HOH
water
ZN
301
2
ZN
ZN
301
A
CA
302
3
CA
CA
302
A
CL
303
4
CL
CL
303
A
NA
304
5
NA
NA
304
A
HOH
305
6
HOH
HOH
305
A
HOH
306
6
HOH
HOH
306
A
HOH
307
6
HOH
HOH
307
A
HOH
308
6
HOH
HOH
308
A
HOH
309
6
HOH
HOH
309
A
HOH
310
6
HOH
HOH
310
A
HOH
311
6
HOH
HOH
311
A
HOH
312
6
HOH
HOH
312
A
HOH
313
6
HOH
HOH
313
A
HOH
314
6
HOH
HOH
314
A
HOH
315
6
HOH
HOH
315
A
HOH
316
6
HOH
HOH
316
A
HOH
317
6
HOH
HOH
317
A
HOH
318
6
HOH
HOH
318
A
HOH
319
6
HOH
HOH
319
A
HOH
320
6
HOH
HOH
320
A
HOH
321
6
HOH
HOH
321
A
HOH
322
6
HOH
HOH
322
A
HOH
323
6
HOH
HOH
323
A
HOH
324
6
HOH
HOH
324
A
HOH
325
6
HOH
HOH
325
A
HOH
326
6
HOH
HOH
326
A
HOH
327
6
HOH
HOH
327
A
HOH
328
6
HOH
HOH
328
A
HOH
329
6
HOH
HOH
329
A
HOH
330
6
HOH
HOH
330
A
HOH
331
6
HOH
HOH
331
A
HOH
332
6
HOH
HOH
332
A
HOH
333
6
HOH
HOH
333
A
HOH
334
6
HOH
HOH
334
A
HOH
335
6
HOH
HOH
335
A
HOH
336
6
HOH
HOH
336
A
HOH
337
6
HOH
HOH
337
A
HOH
338
6
HOH
HOH
338
A
HOH
339
6
HOH
HOH
339
A
HOH
340
6
HOH
HOH
340
A
HOH
341
6
HOH
HOH
341
A
HOH
342
6
HOH
HOH
342
A
HOH
343
6
HOH
HOH
343
A
HOH
344
6
HOH
HOH
344
A
HOH
345
6
HOH
HOH
345
A
HOH
346
6
HOH
HOH
346
A
HOH
347
6
HOH
HOH
347
A
HOH
348
6
HOH
HOH
348
A
HOH
349
6
HOH
HOH
349
A
HOH
350
6
HOH
HOH
350
A
HOH
351
6
HOH
HOH
351
A
HOH
352
6
HOH
HOH
352
A
HOH
353
6
HOH
HOH
353
A
HOH
354
6
HOH
HOH
354
A
HOH
355
6
HOH
HOH
355
A
n
1
443
A
n
2
444
A
n
3
445
A
n
4
446
A
n
5
447
A
n
6
448
A
n
7
449
A
n
8
450
A
n
9
451
A
n
10
452
A
n
11
453
A
n
12
454
A
n
13
455
A
n
14
456
A
n
15
457
A
n
16
458
A
n
17
459
A
n
18
460
A
LEU
461
n
19
LEU
461
A
GLY
462
n
20
GLY
462
A
PRO
463
n
21
PRO
463
A
VAL
464
n
22
VAL
464
A
THR
465
n
23
THR
465
A
PRO
466
n
24
PRO
466
A
GLU
467
n
25
GLU
467
A
ILE
468
n
26
ILE
468
A
CYS
469
n
27
CYS
469
A
LYS
470
n
28
LYS
470
A
GLN
471
n
29
GLN
471
A
ASP
472
n
30
ASP
472
A
ILE
473
n
31
ILE
473
A
VAL
474
n
32
VAL
474
A
PHE
475
n
33
PHE
475
A
ASP
476
n
34
ASP
476
A
GLY
477
n
35
GLY
477
A
ILE
478
n
36
ILE
478
A
ALA
479
n
37
ALA
479
A
GLN
480
n
38
GLN
480
A
ILE
481
n
39
ILE
481
A
ARG
482
n
40
ARG
482
A
GLY
483
n
41
GLY
483
A
GLU
484
n
42
GLU
484
A
ILE
485
n
43
ILE
485
A
PHE
486
n
44
PHE
486
A
PHE
487
n
45
PHE
487
A
PHE
488
n
46
PHE
488
A
LYS
489
n
47
LYS
489
A
ASP
490
n
48
ASP
490
A
ARG
491
n
49
ARG
491
A
PHE
492
n
50
PHE
492
A
ILE
493
n
51
ILE
493
A
TRP
494
n
52
TRP
494
A
ARG
495
n
53
ARG
495
A
THR
496
n
54
THR
496
A
VAL
497
n
55
VAL
497
A
THR
498
n
56
THR
498
A
PRO
499
n
57
PRO
499
A
ARG
500
n
58
ARG
500
A
ASP
501
n
59
ASP
501
A
LYS
502
n
60
LYS
502
A
PRO
503
n
61
PRO
503
A
MET
504
n
62
MET
504
A
GLY
505
n
63
GLY
505
A
PRO
506
n
64
PRO
506
A
LEU
507
n
65
LEU
507
A
LEU
508
n
66
LEU
508
A
VAL
509
n
67
VAL
509
A
ALA
510
n
68
ALA
510
A
THR
511
n
69
THR
511
A
PHE
512
n
70
PHE
512
A
TRP
513
n
71
TRP
513
A
PRO
514
n
72
PRO
514
A
GLU
515
n
73
GLU
515
A
LEU
516
n
74
LEU
516
A
PRO
517
n
75
PRO
517
A
GLU
518
n
76
GLU
518
A
LYS
519
n
77
LYS
519
A
ILE
520
n
78
ILE
520
A
ASP
521
n
79
ASP
521
A
ALA
522
n
80
ALA
522
A
VAL
523
n
81
VAL
523
A
TYR
524
n
82
TYR
524
A
GLU
525
n
83
GLU
525
A
ALA
526
n
84
ALA
526
A
PRO
527
n
85
PRO
527
A
GLN
528
n
86
GLN
528
A
GLU
529
n
87
GLU
529
A
GLU
530
n
88
GLU
530
A
LYS
531
n
89
LYS
531
A
ALA
532
n
90
ALA
532
A
VAL
533
n
91
VAL
533
A
PHE
534
n
92
PHE
534
A
PHE
535
n
93
PHE
535
A
ALA
536
n
94
ALA
536
A
GLY
537
n
95
GLY
537
A
ASN
538
n
96
ASN
538
A
GLU
539
n
97
GLU
539
A
TYR
540
n
98
TYR
540
A
TRP
541
n
99
TRP
541
A
ILE
542
n
100
ILE
542
A
TYR
543
n
101
TYR
543
A
SER
544
n
102
SER
544
A
ALA
545
n
103
ALA
545
A
SER
546
n
104
SER
546
A
THR
547
n
105
THR
547
A
LEU
548
n
106
LEU
548
A
GLU
549
n
107
GLU
549
A
ARG
550
n
108
ARG
550
A
GLY
551
n
109
GLY
551
A
TYR
552
n
110
TYR
552
A
PRO
553
n
111
PRO
553
A
LYS
554
n
112
LYS
554
A
PRO
555
n
113
PRO
555
A
LEU
556
n
114
LEU
556
A
THR
557
n
115
THR
557
A
SER
558
n
116
SER
558
A
LEU
559
n
117
LEU
559
A
GLY
560
n
118
GLY
560
A
LEU
561
n
119
LEU
561
A
PRO
562
n
120
PRO
562
A
PRO
563
n
121
PRO
563
A
ASP
564
n
122
ASP
564
A
VAL
565
n
123
VAL
565
A
GLN
566
n
124
GLN
566
A
ARG
567
n
125
ARG
567
A
VAL
568
n
126
VAL
568
A
ASP
569
n
127
ASP
569
A
ALA
570
n
128
ALA
570
A
ALA
571
n
129
ALA
571
A
PHE
572
n
130
PHE
572
A
ASN
573
n
131
ASN
573
A
TRP
574
n
132
TRP
574
A
SER
575
n
133
SER
575
A
LYS
576
n
134
LYS
576
A
ASN
577
n
135
ASN
577
A
LYS
578
n
136
LYS
578
A
LYS
579
n
137
LYS
579
A
THR
580
n
138
THR
580
A
TYR
581
n
139
TYR
581
A
ILE
582
n
140
ILE
582
A
PHE
583
n
141
PHE
583
A
ALA
584
n
142
ALA
584
A
GLY
585
n
143
GLY
585
A
ASP
586
n
144
ASP
586
A
LYS
587
n
145
LYS
587
A
PHE
588
n
146
PHE
588
A
TRP
589
n
147
TRP
589
A
ARG
590
n
148
ARG
590
A
TYR
591
n
149
TYR
591
A
ASN
592
n
150
ASN
592
A
GLU
593
n
151
GLU
593
A
VAL
594
n
152
VAL
594
A
LYS
595
n
153
LYS
595
A
LYS
596
n
154
LYS
596
A
LYS
597
n
155
LYS
597
A
MET
598
n
156
MET
598
A
ASP
599
n
157
ASP
599
A
PRO
600
n
158
PRO
600
A
GLY
601
n
159
GLY
601
A
PHE
602
n
160
PHE
602
A
PRO
603
n
161
PRO
603
A
LYS
604
n
162
LYS
604
A
LEU
605
n
163
LEU
605
A
ILE
606
n
164
ILE
606
A
ALA
607
n
165
ALA
607
A
ASP
608
n
166
ASP
608
A
ALA
609
n
167
ALA
609
A
TRP
610
n
168
TRP
610
A
ASN
611
n
169
ASN
611
A
ALA
612
n
170
ALA
612
A
ILE
613
n
171
ILE
613
A
PRO
614
n
172
PRO
614
A
ASP
615
n
173
ASP
615
A
ASN
616
n
174
ASN
616
A
LEU
617
n
175
LEU
617
A
ASP
618
n
176
ASP
618
A
ALA
619
n
177
ALA
619
A
VAL
620
n
178
VAL
620
A
VAL
621
n
179
VAL
621
A
ASP
622
n
180
ASP
622
A
LEU
623
n
181
LEU
623
A
GLN
624
n
182
GLN
624
A
GLY
625
n
183
GLY
625
A
GLY
626
n
184
GLY
626
A
GLY
627
n
185
GLY
627
A
HIS
628
n
186
HIS
628
A
SER
629
n
187
SER
629
A
TYR
630
n
188
TYR
630
A
PHE
631
n
189
PHE
631
A
PHE
632
n
190
PHE
632
A
LYS
633
n
191
LYS
633
A
GLY
634
n
192
GLY
634
A
ALA
635
n
193
ALA
635
A
TYR
636
n
194
TYR
636
A
TYR
637
n
195
TYR
637
A
LEU
638
n
196
LEU
638
A
LYS
639
n
197
LYS
639
A
LEU
640
n
198
LEU
640
A
GLU
641
n
199
GLU
641
A
ASN
642
n
200
ASN
642
A
GLN
643
n
201
GLN
643
A
SER
644
n
202
SER
644
A
LEU
645
n
203
LEU
645
A
LYS
646
n
204
LYS
646
A
SER
647
n
205
SER
647
A
VAL
648
n
206
VAL
648
A
LYS
649
n
207
LYS
649
A
PHE
650
n
208
PHE
650
A
GLY
651
n
209
GLY
651
A
SER
652
n
210
SER
652
A
ILE
653
n
211
ILE
653
A
LYS
654
n
212
LYS
654
A
SER
655
n
213
SER
655
A
ASP
656
n
214
ASP
656
A
TRP
657
n
215
TRP
657
A
LEU
658
n
216
LEU
658
A
GLY
659
n
217
GLY
659
A
CYS
660
n
218
CYS
660
A
author_defined_assembly
1
monomeric
A
GLU
467
A
OE2
GLU
25
1_555
A
ZN
301
B
ZN
ZN
1_555
A
GLU
641
A
OE1
GLU
199
2_554
121.2
A
GLU
467
A
OE2
GLU
25
1_555
A
ZN
301
B
ZN
ZN
1_555
A
HIS
628
A
NE2
HIS
186
2_554
121.6
A
GLU
641
A
OE1
GLU
199
2_554
A
ZN
301
B
ZN
ZN
1_555
A
HIS
628
A
NE2
HIS
186
2_554
105.3
A
ASP
476
A
O
ASP
34
1_555
A
CA
302
C
CA
CA
1_555
A
ASP
521
A
O
ASP
79
1_555
73.5
A
ASP
476
A
O
ASP
34
1_555
A
CA
302
C
CA
CA
1_555
A
ASP
569
A
O
ASP
127
1_555
124.3
A
ASP
521
A
O
ASP
79
1_555
A
CA
302
C
CA
CA
1_555
A
ASP
569
A
O
ASP
127
1_555
70.7
A
ASP
476
A
O
ASP
34
1_555
A
CA
302
C
CA
CA
1_555
A
ASP
618
A
O
ASP
176
1_555
81.3
A
ASP
521
A
O
ASP
79
1_555
A
CA
302
C
CA
CA
1_555
A
ASP
618
A
O
ASP
176
1_555
120.3
A
ASP
569
A
O
ASP
127
1_555
A
CA
302
C
CA
CA
1_555
A
ASP
618
A
O
ASP
176
1_555
81.7
A
ASP
476
A
O
ASP
34
1_555
A
CA
302
C
CA
CA
1_555
A
HOH
316
F
O
HOH
1_555
98.7
A
ASP
521
A
O
ASP
79
1_555
A
CA
302
C
CA
CA
1_555
A
HOH
316
F
O
HOH
1_555
80.5
A
ASP
569
A
O
ASP
127
1_555
A
CA
302
C
CA
CA
1_555
A
HOH
316
F
O
HOH
1_555
115.4
A
ASP
618
A
O
ASP
176
1_555
A
CA
302
C
CA
CA
1_555
A
HOH
316
F
O
HOH
1_555
157.6
A
ASP
476
A
O
ASP
34
1_555
A
CA
302
C
CA
CA
1_555
A
HOH
329
F
O
HOH
1_555
158.8
A
ASP
521
A
O
ASP
79
1_555
A
CA
302
C
CA
CA
1_555
A
HOH
329
F
O
HOH
1_555
126.2
A
ASP
569
A
O
ASP
127
1_555
A
CA
302
C
CA
CA
1_555
A
HOH
329
F
O
HOH
1_555
74.4
A
ASP
618
A
O
ASP
176
1_555
A
CA
302
C
CA
CA
1_555
A
HOH
329
F
O
HOH
1_555
92.8
A
HOH
316
F
O
HOH
1_555
A
CA
302
C
CA
CA
1_555
A
HOH
329
F
O
HOH
1_555
79.1
A
ASP
476
A
O
ASP
34
1_555
A
CA
302
C
CA
CA
1_555
A
HOH
335
F
O
HOH
1_555
78.2
A
ASP
521
A
O
ASP
79
1_555
A
CA
302
C
CA
CA
1_555
A
HOH
335
F
O
HOH
1_555
141.2
A
ASP
569
A
O
ASP
127
1_555
A
CA
302
C
CA
CA
1_555
A
HOH
335
F
O
HOH
1_555
148.1
A
ASP
618
A
O
ASP
176
1_555
A
CA
302
C
CA
CA
1_555
A
HOH
335
F
O
HOH
1_555
79.9
A
HOH
316
F
O
HOH
1_555
A
CA
302
C
CA
CA
1_555
A
HOH
335
F
O
HOH
1_555
78.2
A
HOH
329
F
O
HOH
1_555
A
CA
302
C
CA
CA
1_555
A
HOH
335
F
O
HOH
1_555
80.7
A
ILE
478
A
O
ILE
36
1_555
A
NA
304
E
NA
NA
1_555
A
VAL
523
A
O
VAL
81
1_555
95.0
A
ILE
478
A
O
ILE
36
1_555
A
NA
304
E
NA
NA
1_555
A
ALA
571
A
O
ALA
129
1_555
176.5
A
VAL
523
A
O
VAL
81
1_555
A
NA
304
E
NA
NA
1_555
A
ALA
571
A
O
ALA
129
1_555
88.5
A
ILE
478
A
O
ILE
36
1_555
A
NA
304
E
NA
NA
1_555
A
VAL
620
A
O
VAL
178
1_555
84.5
A
VAL
523
A
O
VAL
81
1_555
A
NA
304
E
NA
NA
1_555
A
VAL
620
A
O
VAL
178
1_555
171.8
A
ALA
571
A
O
ALA
129
1_555
A
NA
304
E
NA
NA
1_555
A
VAL
620
A
O
VAL
178
1_555
92.1
A
ILE
478
A
O
ILE
36
1_555
A
NA
304
E
NA
NA
1_555
A
HOH
317
F
O
HOH
1_555
90.2
A
VAL
523
A
O
VAL
81
1_555
A
NA
304
E
NA
NA
1_555
A
HOH
317
F
O
HOH
1_555
90.0
A
ALA
571
A
O
ALA
129
1_555
A
NA
304
E
NA
NA
1_555
A
HOH
317
F
O
HOH
1_555
90.2
A
VAL
620
A
O
VAL
178
1_555
A
NA
304
E
NA
NA
1_555
A
HOH
317
F
O
HOH
1_555
81.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
GLY
477
A
O
GLY
35
A
N
PHE
488
A
N
PHE
46
A
O
ILE
485
A
O
ILE
43
A
N
THR
496
A
N
THR
54
A
O
ALA
522
A
O
ALA
80
A
N
PHE
535
A
N
PHE
93
A
O
ALA
532
A
O
ALA
90
A
N
TYR
543
A
N
TYR
101
A
O
ALA
570
A
O
ALA
128
A
N
PHE
583
A
N
PHE
141
A
O
THR
580
A
O
THR
138
A
N
TYR
591
A
N
TYR
149
A
O
ALA
619
A
O
ALA
177
A
N
PHE
632
A
N
PHE
190
A
O
SER
629
A
O
SER
187
A
N
LEU
640
A
N
LEU
198
A
O
TYR
637
A
O
TYR
195
A
N
GLY
651
A
N
GLY
209
1
A
GLU
443
A
GLU
1
1
Y
1
A
LEU
444
A
LEU
2
1
Y
1
A
TYR
445
A
TYR
3
1
Y
1
A
GLY
446
A
GLY
4
1
Y
1
A
ALA
447
A
ALA
5
1
Y
1
A
SER
448
A
SER
6
1
Y
1
A
PRO
449
A
PRO
7
1
Y
1
A
ASP
450
A
ASP
8
1
Y
1
A
ILE
451
A
ILE
9
1
Y
1
A
ASP
452
A
ASP
10
1
Y
1
A
LEU
453
A
LEU
11
1
Y
1
A
GLY
454
A
GLY
12
1
Y
1
A
THR
455
A
THR
13
1
Y
1
A
GLY
456
A
GLY
14
1
Y
1
A
PRO
457
A
PRO
15
1
Y
1
A
THR
458
A
THR
16
1
Y
1
A
PRO
459
A
PRO
17
1
Y
1
A
THR
460
A
THR
18
1
Y
1
6.92
0.80
106.30
113.22
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
494
494
494
N
1
-5.90
0.80
107.30
101.40
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
494
494
494
N
1
6.73
0.80
106.30
113.03
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
513
513
513
N
1
-5.70
0.80
107.30
101.60
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
513
513
513
N
1
-13.73
1.90
111.40
97.67
A
A
A
CB
CA
C
VAL
VAL
VAL
523
523
523
N
1
5.41
0.80
106.30
111.71
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
541
541
541
N
1
-5.73
0.80
107.30
101.57
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
541
541
541
N
1
-4.12
0.60
121.00
116.88
A
A
A
CB
CG
CD2
TYR
TYR
TYR
552
552
552
N
1
6.80
0.80
106.30
113.10
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
574
574
574
N
1
-6.39
0.80
107.30
100.91
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
574
574
574
N
1
6.19
0.80
106.30
112.49
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
589
589
589
N
1
-8.00
1.30
127.00
119.00
A
A
A
CB
CG
CD1
TRP
TRP
TRP
589
589
589
N
1
-5.82
0.80
107.30
101.48
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
589
589
589
N
1
-10.85
1.60
100.20
89.35
A
A
A
CG
SD
CE
MET
MET
MET
598
598
598
N
1
7.42
0.80
106.30
113.72
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
610
610
610
N
1
-6.54
0.80
107.30
100.76
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
610
610
610
N
1
5.70
0.80
106.30
112.00
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
657
657
657
N
1
-5.68
0.80
107.30
101.62
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
657
657
657
N
1
A
A
HZ2
H1
LYS
HOH
633
308
0.98
1_555
4_555
1
A
CYS
469
69.84
-47.57
1
A
ASP
490
47.83
-121.51
1
A
PRO
517
-65.59
-177.01
1
A
GLN
528
-54.64
-71.19
1
A
ALA
545
62.03
-114.30
1
A
ARG
550
-27.40
105.09
1
A
LYS
578
48.29
22.22
1
A
GLN
624
48.38
-139.47
RESIDUES 529 AND 530 WERE MODELED INTO POOR ELECTRON
DENSITY. THE SIDE CHAIN ORIENTATIONS WERE TAKEN FROM THE
ROTAMER LIBRARY.
0.26
0.188
0.188
2.15
6.5
12556
10.
92.0
1
4.
0.25
2.15
6.5
51
2011
0
0
1960
0.016
3.0
25.7
1.2
2.0
20.
1GEN
13690
1.
0.03
1
3.5
92.
data collection
R-AXIS
model building
X-PLOR
refinement
X-PLOR
data reduction
R-AXIS
phasing
X-PLOR
GELATINASE A
C-TERMINAL DOMAIN OF GELATINASE A
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
A
VAL
509
A
VAL
67
HELX_P
A
THR
511
A
THR
69
5
1
3
A
LEU
556
A
LEU
114
HELX_P
A
LEU
559
A
LEU
117
5
2
4
A
ILE
606
A
ILE
164
HELX_P
A
ALA
609
A
ALA
167
1
3
4
A
ILE
653
A
ILE
211
HELX_P
A
ASP
656
A
ASP
214
1
4
4
disulf
2.013
A
CYS
469
A
SG
CYS
27
1_555
A
CYS
660
A
SG
CYS
218
1_555
metalc
1.905
A
ZN
301
B
ZN
ZN
1_555
A
GLU
467
A
OE2
GLU
25
1_555
metalc
2.059
A
CA
302
C
CA
CA
1_555
A
ASP
476
A
O
ASP
34
1_555
metalc
2.227
A
CA
302
C
CA
CA
1_555
A
ASP
521
A
O
ASP
79
1_555
metalc
2.043
A
CA
302
C
CA
CA
1_555
A
ASP
569
A
O
ASP
127
1_555
metalc
2.158
A
CA
302
C
CA
CA
1_555
A
ASP
618
A
O
ASP
176
1_555
metalc
2.391
A
NA
304
E
NA
NA
1_555
A
ILE
478
A
O
ILE
36
1_555
metalc
2.011
A
NA
304
E
NA
NA
1_555
A
VAL
523
A
O
VAL
81
1_555
metalc
2.134
A
NA
304
E
NA
NA
1_555
A
ALA
571
A
O
ALA
129
1_555
metalc
2.336
A
NA
304
E
NA
NA
1_555
A
VAL
620
A
O
VAL
178
1_555
metalc
2.035
A
CA
302
C
CA
CA
1_555
A
HOH
316
F
O
HOH
1_555
metalc
2.218
A
CA
302
C
CA
CA
1_555
A
HOH
329
F
O
HOH
1_555
metalc
2.305
A
CA
302
C
CA
CA
1_555
A
HOH
335
F
O
HOH
1_555
metalc
2.278
A
NA
304
E
NA
NA
1_555
A
HOH
317
F
O
HOH
1_555
metalc
2.119
A
ZN
301
B
ZN
ZN
1_555
A
GLU
641
A
OE1
GLU
199
2_554
metalc
1.690
A
ZN
301
B
ZN
ZN
1_555
A
HIS
628
A
NE2
HIS
186
2_554
HYDROLASE (METALLOPROTEASE)
HYDROLASE, HEMOPEXIN DOMAIN, METALLOPROTEASE, HYDROLASE (METALLOPROTEASE)
A
GLY
505
A
GLY
63
1
A
PRO
506
A
PRO
64
-4.18
A
TYR
552
A
TYR
110
1
A
PRO
553
A
PRO
111
-8.31
A
PHE
602
A
PHE
160
1
A
PRO
603
A
PRO
161
-1.04
MMP2_HUMAN
UNP
1
1
P08253
MEALMARGALTGPLRALCLLGCLLSHAAAAPSPIIKFPGDVAPKTDKELAVQYLNTFYGCPKESCNLFVLKDTLKKMQKF
FGLPQTGDLDQNTIETMRKPRCGNPDVANYNFFPRKPKWDKNQITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFS
RIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLGEGQVVRVKYGNADGEYCKFPFLFN
GKEYNSCTDTGRSDGFLWCSTTYNFEKDGKYGFCPHEALFTMGGNAEGQPCKFPFRFQGTSYDSCTTEGRTDGYRWCGTT
EDYDRDKKYGFCPETAMSTVGGNSEGAPCVFPFTFLGNKYESCTSAGRSDGKMWCATTANYDDDRKWGFCPDQGYSLFLV
AAHEFGHAMGLEHSQDPGALMAPIYTYTKNFRLSQDDIKGIQELYGASPDIDLGTGPTPTLGPVTPEICKQDIVFDGIAQ
IRGEIFFFKDRFIWRTVTPRDKPMGPLLVATFWPELPEKIDAVYEAPQEEKAVFFAGNEYWIYSASTLERGYPKPLTSLG
LPPDVQRVDAAFNWSKNKKTYIFAGDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKGAYYLKL
ENQSLKSVKFGSIKSDWLGC
443
660
1GEN
443
660
P08253
A
1
1
218
3
3
3
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLY
477
A
GLY
35
A
ILE
481
A
ILE
39
A
GLU
484
A
GLU
42
A
LYS
489
A
LYS
47
A
PHE
492
A
PHE
50
A
THR
496
A
THR
54
A
ALA
522
A
ALA
80
A
ALA
526
A
ALA
84
A
LYS
531
A
LYS
89
A
ALA
536
A
ALA
94
A
GLU
539
A
GLU
97
A
TYR
543
A
TYR
101
A
ALA
570
A
ALA
128
A
TRP
574
A
TRP
132
A
LYS
579
A
LYS
137
A
ALA
584
A
ALA
142
A
LYS
587
A
LYS
145
A
TYR
591
A
TYR
149
A
ALA
619
A
ALA
177
A
ASP
622
A
ASP
180
A
HIS
628
A
HIS
186
A
LYS
633
A
LYS
191
A
TYR
636
A
TYR
194
A
GLU
641
A
GLU
199
A
SER
644
A
SER
202
A
SER
652
A
SER
210
BINDING SITE FOR RESIDUE ZN A 301
Software
3
BINDING SITE FOR RESIDUE CA A 302
Software
7
BINDING SITE FOR RESIDUE CL A 303
Software
8
BINDING SITE FOR RESIDUE NA A 304
Software
6
A
GLU
467
A
GLU
25
3
1_555
A
HIS
628
A
HIS
186
3
2_554
A
GLU
641
A
GLU
199
3
2_554
A
HOH
316
F
HOH
7
1_555
A
HOH
329
F
HOH
7
1_555
A
HOH
335
F
HOH
7
1_555
A
ASP
476
A
ASP
34
7
1_555
A
ASP
521
A
ASP
79
7
1_555
A
ASP
569
A
ASP
127
7
1_555
A
ASP
618
A
ASP
176
7
1_555
A
NA
304
E
NA
8
1_555
A
ILE
478
A
ILE
36
8
1_555
A
ALA
522
A
ALA
80
8
1_555
A
VAL
523
A
VAL
81
8
1_555
A
ALA
570
A
ALA
128
8
1_555
A
ALA
571
A
ALA
129
8
1_555
A
ALA
619
A
ALA
177
8
1_555
A
VAL
620
A
VAL
178
8
1_555
A
CL
303
D
CL
6
1_555
A
HOH
317
F
HOH
6
1_555
A
ILE
478
A
ILE
36
6
1_555
A
VAL
523
A
VAL
81
6
1_555
A
ALA
571
A
ALA
129
6
1_555
A
VAL
620
A
VAL
178
6
1_555
19
P 21 21 21