0.014881 0.000000 0.000000 0.000000 0.012005 0.000000 0.000000 0.000000 0.010417 0.00000 0.00000 0.00000 Concha, N.O. Janson, C.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 67.200 83.300 96.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C20 H20 N2 O5 S 400.448 1-METHYL-5-(2-PHENOXYMETHYL-PYRROLIDINE-1-SULFONYL)-1H-INDOLE-2,3-DIONE non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N S N 251 N N N 252 N N N 253 N O N 254 N O N 255 N O N 256 N O N 257 N O N 258 N C N 259 N C Y 260 N C Y 261 N C Y 262 N C Y 263 N C Y 264 N C Y 265 N C N 266 S C N 267 N C N 268 N C N 269 N C N 270 N C Y 271 N C Y 272 N C Y 273 N C Y 274 N C Y 275 N C Y 276 N C N 277 N C N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N N N 299 S C N 300 N C N 301 N O N 302 N C Y 303 N C Y 304 N C Y 305 N C Y 306 N C Y 307 N C Y 308 N C N 309 N O N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C N 326 N C N 327 N C N 328 N O N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N N N 339 S C N 340 N C N 341 N O N 342 N C N 343 N O N 344 N O N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N N N 353 S C N 354 N C N 355 N O N 356 R C N 357 N O N 358 N C N 359 N O N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N N N 370 S C N 371 N C N 372 N O N 373 N C Y 374 N C Y 375 N C Y 376 N C Y 377 N N Y 378 N C Y 379 N C Y 380 N C Y 381 N C Y 382 N C N 383 N O N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N N N 397 S C N 398 N C N 399 N O N 400 N C Y 401 N C Y 402 N C Y 403 N C Y 404 N C Y 405 N C Y 406 N C N 407 N O N 408 N O N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N N N 421 S C N 422 N C N 423 N O N 424 N C N 425 N C N 426 N C N 427 N O N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N doub N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N doub N 249 N doub N 250 N sing N 251 N sing Y 252 N doub Y 253 N sing N 254 N sing Y 255 N sing Y 256 N doub N 257 N sing Y 258 N sing N 259 N sing Y 260 N doub N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing Y 274 N doub Y 275 N sing Y 276 N sing N 277 N sing Y 278 N doub N 279 N sing Y 280 N sing N 281 N sing Y 282 N doub N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N doub N 295 N sing N 296 N sing N 297 N sing N 298 N sing Y 299 N doub Y 300 N sing Y 301 N sing N 302 N sing Y 303 N doub N 304 N sing Y 305 N doub N 306 N sing Y 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N doub N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N doub N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N doub N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N doub N 364 N sing N 365 N sing N 366 N sing N 367 N sing Y 368 N doub Y 369 N sing Y 370 N sing N 371 N sing Y 372 N doub Y 373 N sing Y 374 N sing N 375 N sing Y 376 N sing Y 377 N doub N 378 N sing Y 379 N doub N 380 N sing Y 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N doub N 392 N sing N 393 N sing N 394 N sing N 395 N sing Y 396 N doub Y 397 N sing Y 398 N sing N 399 N sing Y 400 N doub N 401 N sing Y 402 N doub N 403 N sing Y 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N doub N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing US J.Biol.Chem. JBCHA3 0071 0021-9258 275 16007 16014 10.1074/jbc.275.21.16007 10821855 Potent and selective nonpeptide inhibitors of caspases 3 and 7 inhibit apoptosis and maintain cell functionality. 2000 US J.Biol.Chem. JBCHA3 0071 0021-9258 269 30761 30764 CPP32, a novel human apoptotic protein with homology to Caenorhabditis elegans cell death protein ced-3 and mammalian interleukin-1-b-converting enzyme 1994 10.2210/pdb1gfw/pdb pdb_00001gfw 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 1998-01-30 ADSC QUANTUM 4 SINGLE WAVELENGTH M x-ray 1 1.100 1.0 X12B NSLS 1.100 SYNCHROTRON NSLS BEAMLINE X12B 16639.902 CASPASE-3 (APOPAIN, P20) ACTIVATED MATURE CASPASE-3 (P20) WITHOUT PRO-DOMAIN OR LINKER (RESIDUES 29-175) 1 man polymer 11423.142 CASPASE-3 (APOPAIN, P10) ACTIVATED MATURE CASPASE-3 (P10) WITHOUT PRO-DOMAIN OR LINKER (RESIDUES 181-277) 1 man polymer 400.448 1-METHYL-5-(2-PHENOXYMETHYL-PYRROLIDINE-1-SULFONYL)-1H-INDOLE-2,3-DIONE 1 syn non-polymer 18.015 water 45 nat water no no SGISLDNSYKMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEIVELMRDVSKEDH SKRSSFVCVLLSHGEEGIIFGTNGPVDLKKITNFFRGDRCRSLTGKPKLFIIQACRGTELDCGIETD SGISLDNSYKMDYPEMGLCIIINNKNFHKSTGMTSRSGTDVDAANLRETFRNLKYEVRNKNDLTREEIVELMRDVSKEDH SKRSSFVCVLLSHGEEGIIFGTNGPVDLKKITNFFRGDRCRSLTGKPKLFIIQACRGTELDCGIETD A polypeptide(L) no no DMACHKIPVDADFLYAYSTAPGYYSWRNSKDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVATEFESFSFDATFHAKK QIPCIVSMLTKELYFYH DMACHKIPVDADFLYAYSTAPGYYSWRNSKDGSWFIQSLCAMLKQYADKLEFMHILTRVNRKVATEFESFSFDATFHAKK QIPCIVSMLTKELYFYH B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia Escherichia coli sample HUMAN T-LYMPHOCYTE CELL LINE JURKAT 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) BL21 (DE3) human Homo Escherichia Escherichia coli sample 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) BL21 (DE3) 1 2.39 48.60 VAPOR DIFFUSION, HANGING DROP 5.9 4 ul hanging drops were prepared by mixing equal volumes of protein (10 mg/ml in 20 mM HEPES, pH 7.0) and reservoir solution. The drops equilibrated against 500 ul of 15-18% PEG6000, 0.1M sodium citrate, pH 5.9, 20 mM L-cysteine, and 5% glycerol., VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 pdbx_unobs_or_zero_occ_atoms software software struct_conn computing chem_comp_atom chem_comp_bond database_2 pdbx_unobs_or_zero_occ_atoms struct_site repository Initial release Version format compliance Version format compliance Advisory Refinement description Data collection Derived calculations Refinement description Data collection Advisory Data collection Database references Derived calculations 1 0 2000-06-23 1 1 2008-04-26 1 2 2011-07-13 1 3 2017-10-04 1 4 2019-07-24 1 5 2019-08-14 1 6 2023-12-27 _software.classification _software.name _struct_conn.pdbx_leaving_atom_flag _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id 2000-06-23 SPRSDE Crystal structure of the complex of apopain with the tetrapeptide aldehyde inhibitor AC-DEVD-CHO Crystal structure of the complex of apopain with the tetrapeptide inhibitor AC- DVAD-FMC RCSB Y RCSB 2000-06-16 REL MSI 1-METHYL-5-(2-PHENOXYMETHYL-PYRROLIDINE-1-SULFONYL)-1H-INDOLE-2,3-DIONE HOH water MSI 1 3 MSI MSI 1 A HOH 2 4 HOH HOH 176 A HOH 8 4 HOH HOH 177 A HOH 9 4 HOH HOH 178 A HOH 10 4 HOH HOH 179 A HOH 11 4 HOH HOH 180 A HOH 14 4 HOH HOH 181 A HOH 16 4 HOH HOH 182 A HOH 17 4 HOH HOH 183 A HOH 18 4 HOH HOH 184 A HOH 19 4 HOH HOH 185 A HOH 20 4 HOH HOH 186 A HOH 22 4 HOH HOH 187 A HOH 24 4 HOH HOH 188 A HOH 26 4 HOH HOH 189 A HOH 27 4 HOH HOH 190 A HOH 28 4 HOH HOH 191 A HOH 29 4 HOH HOH 192 A HOH 30 4 HOH HOH 193 A HOH 31 4 HOH HOH 194 A HOH 32 4 HOH HOH 195 A HOH 34 4 HOH HOH 196 A HOH 35 4 HOH HOH 197 A HOH 36 4 HOH HOH 198 A HOH 37 4 HOH HOH 199 A HOH 38 4 HOH HOH 200 A HOH 39 4 HOH HOH 201 A HOH 40 4 HOH HOH 202 A HOH 45 4 HOH HOH 203 A HOH 1 4 HOH HOH 1 B HOH 3 4 HOH HOH 3 B HOH 4 4 HOH HOH 4 B HOH 5 4 HOH HOH 5 B HOH 6 4 HOH HOH 6 B HOH 7 4 HOH HOH 7 B HOH 12 4 HOH HOH 12 B HOH 13 4 HOH HOH 13 B HOH 15 4 HOH HOH 15 B HOH 21 4 HOH HOH 21 B HOH 23 4 HOH HOH 23 B HOH 25 4 HOH HOH 25 B HOH 33 4 HOH HOH 33 B HOH 41 4 HOH HOH 41 B HOH 42 4 HOH HOH 42 B HOH 43 4 HOH HOH 43 B HOH 44 4 HOH HOH 44 B SER 29 n 1 SER 29 A GLY 30 n 2 GLY 30 A ILE 31 n 3 ILE 31 A SER 32 n 4 SER 32 A LEU 33 n 5 LEU 33 A ASP 34 n 6 ASP 34 A ASN 35 n 7 ASN 35 A SER 36 n 8 SER 36 A TYR 37 n 9 TYR 37 A LYS 38 n 10 LYS 38 A MET 39 n 11 MET 39 A ASP 40 n 12 ASP 40 A TYR 41 n 13 TYR 41 A PRO 42 n 14 PRO 42 A GLU 43 n 15 GLU 43 A MET 44 n 16 MET 44 A GLY 45 n 17 GLY 45 A LEU 46 n 18 LEU 46 A CYS 47 n 19 CYS 47 A ILE 48 n 20 ILE 48 A ILE 49 n 21 ILE 49 A ILE 50 n 22 ILE 50 A ASN 51 n 23 ASN 51 A ASN 52 n 24 ASN 52 A LYS 53 n 25 LYS 53 A ASN 54 n 26 ASN 54 A PHE 55 n 27 PHE 55 A HIS 56 n 28 HIS 56 A LYS 57 n 29 LYS 57 A SER 58 n 30 SER 58 A THR 59 n 31 THR 59 A GLY 60 n 32 GLY 60 A MET 61 n 33 MET 61 A THR 62 n 34 THR 62 A SER 63 n 35 SER 63 A ARG 64 n 36 ARG 64 A SER 65 n 37 SER 65 A GLY 66 n 38 GLY 66 A THR 67 n 39 THR 67 A ASP 68 n 40 ASP 68 A VAL 69 n 41 VAL 69 A ASP 70 n 42 ASP 70 A ALA 71 n 43 ALA 71 A ALA 72 n 44 ALA 72 A ASN 73 n 45 ASN 73 A LEU 74 n 46 LEU 74 A ARG 75 n 47 ARG 75 A GLU 76 n 48 GLU 76 A THR 77 n 49 THR 77 A PHE 78 n 50 PHE 78 A ARG 79 n 51 ARG 79 A ASN 80 n 52 ASN 80 A LEU 81 n 53 LEU 81 A LYS 82 n 54 LYS 82 A TYR 83 n 55 TYR 83 A GLU 84 n 56 GLU 84 A VAL 85 n 57 VAL 85 A ARG 86 n 58 ARG 86 A ASN 87 n 59 ASN 87 A LYS 88 n 60 LYS 88 A ASN 89 n 61 ASN 89 A ASP 90 n 62 ASP 90 A LEU 91 n 63 LEU 91 A THR 92 n 64 THR 92 A ARG 93 n 65 ARG 93 A GLU 94 n 66 GLU 94 A GLU 95 n 67 GLU 95 A ILE 96 n 68 ILE 96 A VAL 97 n 69 VAL 97 A GLU 98 n 70 GLU 98 A LEU 99 n 71 LEU 99 A MET 100 n 72 MET 100 A ARG 101 n 73 ARG 101 A ASP 102 n 74 ASP 102 A VAL 103 n 75 VAL 103 A SER 104 n 76 SER 104 A LYS 105 n 77 LYS 105 A GLU 106 n 78 GLU 106 A ASP 107 n 79 ASP 107 A HIS 108 n 80 HIS 108 A SER 109 n 81 SER 109 A LYS 110 n 82 LYS 110 A ARG 111 n 83 ARG 111 A SER 112 n 84 SER 112 A SER 113 n 85 SER 113 A PHE 114 n 86 PHE 114 A VAL 115 n 87 VAL 115 A CYS 116 n 88 CYS 116 A VAL 117 n 89 VAL 117 A LEU 118 n 90 LEU 118 A LEU 119 n 91 LEU 119 A SER 120 n 92 SER 120 A HIS 121 n 93 HIS 121 A GLY 122 n 94 GLY 122 A GLU 123 n 95 GLU 123 A GLU 124 n 96 GLU 124 A GLY 125 n 97 GLY 125 A ILE 126 n 98 ILE 126 A ILE 127 n 99 ILE 127 A PHE 128 n 100 PHE 128 A GLY 129 n 101 GLY 129 A THR 130 n 102 THR 130 A ASN 131 n 103 ASN 131 A GLY 132 n 104 GLY 132 A PRO 133 n 105 PRO 133 A VAL 134 n 106 VAL 134 A ASP 135 n 107 ASP 135 A LEU 136 n 108 LEU 136 A LYS 137 n 109 LYS 137 A LYS 138 n 110 LYS 138 A ILE 139 n 111 ILE 139 A THR 140 n 112 THR 140 A ASN 141 n 113 ASN 141 A PHE 142 n 114 PHE 142 A PHE 143 n 115 PHE 143 A ARG 144 n 116 ARG 144 A GLY 145 n 117 GLY 145 A ASP 146 n 118 ASP 146 A ARG 147 n 119 ARG 147 A CYS 148 n 120 CYS 148 A ARG 149 n 121 ARG 149 A SER 150 n 122 SER 150 A LEU 151 n 123 LEU 151 A THR 152 n 124 THR 152 A GLY 153 n 125 GLY 153 A LYS 154 n 126 LYS 154 A PRO 155 n 127 PRO 155 A LYS 156 n 128 LYS 156 A LEU 157 n 129 LEU 157 A PHE 158 n 130 PHE 158 A ILE 159 n 131 ILE 159 A ILE 160 n 132 ILE 160 A GLN 161 n 133 GLN 161 A ALA 162 n 134 ALA 162 A CYS 163 n 135 CYS 163 A ARG 164 n 136 ARG 164 A GLY 165 n 137 GLY 165 A THR 166 n 138 THR 166 A GLU 167 n 139 GLU 167 A LEU 168 n 140 LEU 168 A ASP 169 n 141 ASP 169 A CYS 170 n 142 CYS 170 A GLY 171 n 143 GLY 171 A ILE 172 n 144 ILE 172 A GLU 173 n 145 GLU 173 A n 146 174 A n 147 175 A n 1 181 B n 2 182 B n 3 183 B n 4 184 B HIS 185 n 5 HIS 185 B LYS 186 n 6 LYS 186 B ILE 187 n 7 ILE 187 B PRO 188 n 8 PRO 188 B VAL 189 n 9 VAL 189 B ASP 190 n 10 ASP 190 B ALA 191 n 11 ALA 191 B ASP 192 n 12 ASP 192 B PHE 193 n 13 PHE 193 B LEU 194 n 14 LEU 194 B TYR 195 n 15 TYR 195 B ALA 196 n 16 ALA 196 B TYR 197 n 17 TYR 197 B SER 198 n 18 SER 198 B THR 199 n 19 THR 199 B ALA 200 n 20 ALA 200 B PRO 201 n 21 PRO 201 B GLY 202 n 22 GLY 202 B TYR 203 n 23 TYR 203 B TYR 204 n 24 TYR 204 B SER 205 n 25 SER 205 B TRP 206 n 26 TRP 206 B ARG 207 n 27 ARG 207 B ASN 208 n 28 ASN 208 B SER 209 n 29 SER 209 B LYS 210 n 30 LYS 210 B ASP 211 n 31 ASP 211 B GLY 212 n 32 GLY 212 B SER 213 n 33 SER 213 B TRP 214 n 34 TRP 214 B PHE 215 n 35 PHE 215 B ILE 216 n 36 ILE 216 B GLN 217 n 37 GLN 217 B SER 218 n 38 SER 218 B LEU 219 n 39 LEU 219 B CYS 220 n 40 CYS 220 B ALA 221 n 41 ALA 221 B MET 222 n 42 MET 222 B LEU 223 n 43 LEU 223 B LYS 224 n 44 LYS 224 B GLN 225 n 45 GLN 225 B TYR 226 n 46 TYR 226 B ALA 227 n 47 ALA 227 B ASP 228 n 48 ASP 228 B LYS 229 n 49 LYS 229 B LEU 230 n 50 LEU 230 B GLU 231 n 51 GLU 231 B PHE 232 n 52 PHE 232 B MET 233 n 53 MET 233 B HIS 234 n 54 HIS 234 B ILE 235 n 55 ILE 235 B LEU 236 n 56 LEU 236 B THR 237 n 57 THR 237 B ARG 238 n 58 ARG 238 B VAL 239 n 59 VAL 239 B ASN 240 n 60 ASN 240 B ARG 241 n 61 ARG 241 B LYS 242 n 62 LYS 242 B VAL 243 n 63 VAL 243 B ALA 244 n 64 ALA 244 B THR 245 n 65 THR 245 B GLU 246 n 66 GLU 246 B PHE 247 n 67 PHE 247 B GLU 248 n 68 GLU 248 B SER 249 n 69 SER 249 B PHE 250 n 70 PHE 250 B SER 251 n 71 SER 251 B PHE 252 n 72 PHE 252 B ASP 253 n 73 ASP 253 B ALA 254 n 74 ALA 254 B THR 255 n 75 THR 255 B PHE 256 n 76 PHE 256 B HIS 257 n 77 HIS 257 B ALA 258 n 78 ALA 258 B LYS 259 n 79 LYS 259 B LYS 260 n 80 LYS 260 B GLN 261 n 81 GLN 261 B ILE 262 n 82 ILE 262 B PRO 263 n 83 PRO 263 B CYS 264 n 84 CYS 264 B ILE 265 n 85 ILE 265 B VAL 266 n 86 VAL 266 B SER 267 n 87 SER 267 B MET 268 n 88 MET 268 B LEU 269 n 89 LEU 269 B THR 270 n 90 THR 270 B LYS 271 n 91 LYS 271 B GLU 272 n 92 GLU 272 B LEU 273 n 93 LEU 273 B TYR 274 n 94 TYR 274 B PHE 275 n 95 PHE 275 B TYR 276 n 96 TYR 276 B HIS 277 n 97 HIS 277 B author_and_software_defined_assembly PISA 2 dimeric software_defined_assembly PISA 8 octameric software_defined_assembly PISA 8 octameric software_defined_assembly PISA 4 tetrameric software_defined_assembly PISA 4 tetrameric 5070 -23 11720 33290 -144 33880 32650 -163 34510 14720 -70 18860 11670 -56 21910 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_665 -x+1,-y+1,z crystal symmetry operation 67.2000000000 83.3000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 3_656 -x+1,y,-z+1 crystal symmetry operation 67.2000000000 0.0000000000 96.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 4_566 x,-y+1,-z+1 crystal symmetry operation 0.0000000000 83.3000000000 96.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_655 -x+1,-y,z crystal symmetry operation 67.2000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 4_556 x,-y,-z+1 crystal symmetry operation 0.0000000000 0.0000000000 96.0000000000 A N ARG 86 A N ARG 58 A O CYS 47 A O CYS 19 A N ILE 48 A N ILE 20 A O VAL 115 A O VAL 87 A O PHE 114 A O PHE 86 A N LEU 157 A N LEU 129 A N PHE 158 A N PHE 130 B O LEU 194 B O LEU 14 B O TYR 197 B O TYR 17 B N CYS 264 B N CYS 84 A O GLU 123 A O GLU 95 A N ILE 126 A N ILE 98 A O ILE 127 A O ILE 99 A N VAL 134 A N VAL 106 B N ASN 208 B N ASN 28 B O GLY 212 B O GLY 32 1 A CE LYS 53 A CE LYS 25 0 Y 1 A NZ LYS 53 A NZ LYS 25 0 Y 1 A CB LYS 57 A CB LYS 29 0 Y 1 A CG LYS 57 A CG LYS 29 0 Y 1 A CD LYS 57 A CD LYS 29 0 Y 1 A CE LYS 57 A CE LYS 29 0 Y 1 A NZ LYS 57 A NZ LYS 29 0 Y 1 A CG LYS 88 A CG LYS 60 0 Y 1 A CD LYS 88 A CD LYS 60 0 Y 1 A CE LYS 88 A CE LYS 60 0 Y 1 A NZ LYS 88 A NZ LYS 60 0 Y 1 A CZ ARG 101 A CZ ARG 73 0 Y 1 A NH1 ARG 101 A NH1 ARG 73 0 Y 1 A NH2 ARG 101 A NH2 ARG 73 0 Y 1 A CG ARG 149 A CG ARG 121 0 Y 1 A CD ARG 149 A CD ARG 121 0 Y 1 A NE ARG 149 A NE ARG 121 0 Y 1 A CZ ARG 149 A CZ ARG 121 0 Y 1 A NH1 ARG 149 A NH1 ARG 121 0 Y 1 A NH2 ARG 149 A NH2 ARG 121 0 Y 1 A CB GLU 173 A CB GLU 145 0 Y 1 A CG GLU 173 A CG GLU 145 0 Y 1 A CD GLU 173 A CD GLU 145 0 Y 1 A OE1 GLU 173 A OE1 GLU 145 0 Y 1 A OE2 GLU 173 A OE2 GLU 145 0 Y 1 B CB LYS 210 B CB LYS 30 0 Y 1 B CG LYS 210 B CG LYS 30 0 Y 1 B CD LYS 210 B CD LYS 30 0 Y 1 B CE LYS 210 B CE LYS 30 0 Y 1 B NZ LYS 210 B NZ LYS 30 0 Y 1 B CD LYS 224 B CD LYS 44 0 Y 1 B CE LYS 224 B CE LYS 44 0 Y 1 B NZ LYS 224 B NZ LYS 44 0 Y 1 A THR 174 A THR 146 1 Y 1 A ASP 175 A ASP 147 1 Y 1 B ASP 181 B ASP 1 1 Y 1 B MET 182 B MET 2 1 Y 1 B ALA 183 B ALA 3 1 Y 1 B CYS 184 B CYS 4 1 Y 1 A A ND2 OG1 ASN THR 51 67 2.10 1 B B O OG1 ARG THR 241 245 2.11 1 B B OG1 O THR HOH 245 21 2.19 1 -15.16 2.50 113.10 97.94 A A A N CA C GLY GLY GLY 129 129 129 N 1 A ASP 34 -174.22 63.07 1 A PRO 42 -39.78 -30.08 1 A ASN 51 -102.37 74.07 1 A LYS 57 -28.59 -40.83 1 A ASP 90 32.00 69.84 1 A SER 120 -173.41 -166.89 1 B LYS 210 -99.66 -62.70 1 B TYR 226 -143.95 -7.44 1 B LYS 229 -136.20 -52.81 1 B GLU 248 -164.16 119.74 protein_rep.param protein.top protein_rep.param 277.top water_rep.param water.top Data collection proceeded in the presence of "ice-rings" 0.285 0.011 0.2 2.8 40.0 687 7014 6386 10.8 92.3 RANDOM 1413969.37 0.0 1 THROUGHOUT 0 see Engh & Huber (1991) Acta Cryst A 47, 392-400. FLAT MODEL 0.363132 33.276 0.43 0.32 5.00 0.44 0.42 2.8 40.0 45 1995 28 0 1922 0.013 1.7 25.0 0.89 1.56 1.50 2.50 2.00 2.29 2.00 3.25 2.50 0.345 0.038 0.28 2.9 84 824 6 9.3 80.4 47.0 2.8 50.0 1GFW 7014 6775 0 2.0 0.174 1 4.3 4.5 96.6 0.267 2.8 2.9 692 3.0 82.4 refinement CNS data reduction DENZO data scaling SCALEPACK phasing AMoRE refinement X-PLOR 3.851 & CNS data collection MAR345 THE 2.8 ANGSTROM CRYSTAL STRUCTURE OF CASPASE-3 (APOPAIN OR CPP32)IN COMPLEX WITH AN ISATIN SULFONAMIDE INHIBITOR. 1 N N 2 N N 3 N N 4 N N 4 N N A HIS 56 A HIS 28 HELX_P A GLY 60 A GLY 32 5 1 5 A GLY 66 A GLY 38 HELX_P A LEU 81 A LEU 53 1 2 16 A THR 92 A THR 64 HELX_P A GLU 106 A GLU 78 1 3 15 A LEU 136 A LEU 108 HELX_P A ASN 141 A ASN 113 1 4 6 A CYS 148 A CYS 120 HELX_P A THR 152 A THR 124 5 5 5 B TRP 214 B TRP 34 HELX_P B ALA 227 B ALA 47 1 6 14 B GLU 231 B GLU 51 HELX_P B PHE 247 B PHE 67 1 7 17 B ASP 253 B ASP 73 HELX_P B HIS 257 B HIS 77 5 8 5 covale 1.829 none A MSI 1 C C3 MSI 1_555 A CYS 163 A SG CYS 135 1_555 HYDROLASE CASPASE INHIBITOR, CASPASE-3, APOPAIN, ISTIN SULFONAMIDE, HYDROLASE CASP3_HUMAN UNP 1 29 P42574 CASP3_HUMAN UNP 2 181 P42574 29 175 1GFW 29 175 P42574 A 1 1 147 181 277 1GFW 181 277 P42574 B 2 1 97 6 3 2 parallel parallel parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLU 84 A GLU 56 A ASN 89 A ASN 61 A LEU 46 A LEU 18 A ASN 51 A ASN 23 A PHE 114 A PHE 86 A LEU 119 A LEU 91 A LYS 156 A LYS 128 A GLN 161 A GLN 133 B PHE 193 B PHE 13 B TYR 197 B TYR 17 B CYS 264 B CYS 84 B SER 267 B SER 87 A GLY 122 A GLY 94 A GLU 123 A GLU 95 A ILE 126 A ILE 98 A PHE 128 A PHE 100 A PRO 133 A PRO 105 A ASP 135 A ASP 107 B ARG 207 B ARG 27 B ASN 208 B ASN 28 B GLY 212 B GLY 32 B SER 213 B SER 33 BINDING SITE FOR RESIDUE MSI A 1 A MSI 1 Software 13 A LYS 57 A LYS 29 13 2_665 A SER 58 A SER 30 13 2_665 A MET 61 A MET 33 13 1_555 A HIS 121 A HIS 93 13 1_555 A GLY 122 A GLY 94 13 1_555 A CYS 163 A CYS 135 13 1_555 A HOH 184 D HOH 13 1_555 B HOH 44 E HOH 13 1_555 B TYR 204 B TYR 24 13 1_555 B SER 205 B SER 25 13 1_555 B TRP 206 B TRP 26 13 1_555 B ARG 207 B ARG 27 13 1_555 B PHE 256 B PHE 76 13 1_555 23 I 2 2 2