1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Campos-Olivas, R.
Bormann, C.
Hoerr, I.
Jung, G.
Gronenborn, A.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
308
765
782
10.1006/jmbi.2001.4622
11350173
Solution structure, backbone dynamics and chitin binding of the anti-fungal protein from Streptomyces tendae TU901.
2001
10.2210/pdb1gh5/pdb
pdb_00001gh5
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
10000.162
ANTIFUNGAL PROTEIN
AFP1
1
man
polymer
no
no
MINRTDCNENSYLEIHNNEGRDTLCFANAGTMPVAIYGVNWVESGNNVVTLQFQRNLSDPRLETITLQKWGSWNPGHIHE
ILSIRIY
MINRTDCNENSYLEIHNNEGRDTLCFANAGTMPVAIYGVNWVESGNNVVTLQFQRNLSDPRLETITLQKWGSWNPGHIHE
ILSIRIY
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Streptomyces
TU901
Escherichia
Escherichia coli
sample
AFP
1932
Streptomyces tendae
469008
Escherichia coli BL21(DE3)
BL21(DE3)
PLASMID
PET11A(NOVAGEN)
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Database references
1
0
2001-03-28
1
1
2008-04-26
1
2
2011-07-13
1
3
2022-02-23
1
4
2022-12-21
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_struct_ref_seq_dif.details
1H, 13C, and 15N Assignments for the Antifungal Protein from Streptomyces tendae Tu901
30 conformer ensemble
RCSB
Y
RCSB
2000-11-04
REL
REL
1
2D NOESY
3D_15N-separated_NOESY
HNHA
HNHB
4D_13C-separated_NOESY
HN(CO)CG_arom/HNCG_arom
2D NOESY
2D NOESY
0.32 M
8.0
ambient
293
K
0.32 M
8.0
ambient
277
K
Torsion angle dynamics with DYANA.
0.5-0.8 mM AFP1 [U-99% 15N; U-10% 13C] 20 mM phosphate, pH 8.0. 0.1 M NaCl. 0.02 mM EDTA. 0.01% NaN3.
91.7% H2O. 8.3% D2O.
0.5-0.8 mM AFP1 [U-99% 15N; U-10% 13C] 20 mM phosphate, pH 8.0. 0.1 M NaCl. 0.02 mM EDTA. 0.01% NaN3.
100% D2O
0.5-0.8 mM AFP1 [U-99% 15N; U-13C] 20 mM phosphate, pH 8.0. 0.1 M NaCl. 0.02 mM EDTA. 0.01% NaN3.
91.7% H2O. 8.3% D2O.
0.5-0.8 mM AFP1 [U-99% 15N; U-13C] 20 mM phosphate, pH 8.0. 0.1 M NaCl. 0.02 mM EDTA. 0.01% NaN3.
100% D2O
Delaglio
processing
NMRPipe
X.X
Johnson
data analysis
XwinNMR
4.1.1
Guentert
structure solution
DYANA
1.5
Guentert
refinement
DYANA
1.5
500
Bruker
DMX
600
Bruker
DMX
750
Bruker
DMX
800
Bruker
DRX
MET
1
n
1
MET
1
A
ILE
2
n
2
ILE
2
A
ASN
3
n
3
ASN
3
A
ARG
4
n
4
ARG
4
A
THR
5
n
5
THR
5
A
ASP
6
n
6
ASP
6
A
CYS
7
n
7
CYS
7
A
ASN
8
n
8
ASN
8
A
GLU
9
n
9
GLU
9
A
ASN
10
n
10
ASN
10
A
SER
11
n
11
SER
11
A
TYR
12
n
12
TYR
12
A
LEU
13
n
13
LEU
13
A
GLU
14
n
14
GLU
14
A
ILE
15
n
15
ILE
15
A
HIS
16
n
16
HIS
16
A
ASN
17
n
17
ASN
17
A
ASN
18
n
18
ASN
18
A
GLU
19
n
19
GLU
19
A
GLY
20
n
20
GLY
20
A
ARG
21
n
21
ARG
21
A
ASP
22
n
22
ASP
22
A
THR
23
n
23
THR
23
A
LEU
24
n
24
LEU
24
A
CYS
25
n
25
CYS
25
A
PHE
26
n
26
PHE
26
A
ALA
27
n
27
ALA
27
A
ASN
28
n
28
ASN
28
A
ALA
29
n
29
ALA
29
A
GLY
30
n
30
GLY
30
A
THR
31
n
31
THR
31
A
MET
32
n
32
MET
32
A
PRO
33
n
33
PRO
33
A
VAL
34
n
34
VAL
34
A
ALA
35
n
35
ALA
35
A
ILE
36
n
36
ILE
36
A
TYR
37
n
37
TYR
37
A
GLY
38
n
38
GLY
38
A
VAL
39
n
39
VAL
39
A
ASN
40
n
40
ASN
40
A
TRP
41
n
41
TRP
41
A
VAL
42
n
42
VAL
42
A
GLU
43
n
43
GLU
43
A
SER
44
n
44
SER
44
A
GLY
45
n
45
GLY
45
A
ASN
46
n
46
ASN
46
A
ASN
47
n
47
ASN
47
A
VAL
48
n
48
VAL
48
A
VAL
49
n
49
VAL
49
A
THR
50
n
50
THR
50
A
LEU
51
n
51
LEU
51
A
GLN
52
n
52
GLN
52
A
PHE
53
n
53
PHE
53
A
GLN
54
n
54
GLN
54
A
ARG
55
n
55
ARG
55
A
ASN
56
n
56
ASN
56
A
LEU
57
n
57
LEU
57
A
SER
58
n
58
SER
58
A
ASP
59
n
59
ASP
59
A
PRO
60
n
60
PRO
60
A
ARG
61
n
61
ARG
61
A
LEU
62
n
62
LEU
62
A
GLU
63
n
63
GLU
63
A
THR
64
n
64
THR
64
A
ILE
65
n
65
ILE
65
A
THR
66
n
66
THR
66
A
LEU
67
n
67
LEU
67
A
GLN
68
n
68
GLN
68
A
LYS
69
n
69
LYS
69
A
TRP
70
n
70
TRP
70
A
GLY
71
n
71
GLY
71
A
SER
72
n
72
SER
72
A
TRP
73
n
73
TRP
73
A
ASN
74
n
74
ASN
74
A
PRO
75
n
75
PRO
75
A
GLY
76
n
76
GLY
76
A
HIS
77
n
77
HIS
77
A
ILE
78
n
78
ILE
78
A
HIS
79
n
79
HIS
79
A
GLU
80
n
80
GLU
80
A
ILE
81
n
81
ILE
81
A
LEU
82
n
82
LEU
82
A
SER
83
n
83
SER
83
A
ILE
84
n
84
ILE
84
A
ARG
85
n
85
ARG
85
A
ILE
86
n
86
ILE
86
A
TYR
87
n
87
TYR
87
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
THR
5
A
N
THR
5
A
O
CYS
25
A
O
CYS
25
A
N
PHE
26
A
N
PHE
26
A
O
LEU
13
A
O
LEU
13
A
O
HIS
16
A
O
HIS
16
A
N
ASN
40
A
N
ASN
40
A
O
SER
44
A
O
SER
44
A
N
GLY
71
A
N
GLY
71
A
O
MET
32
A
O
MET
32
A
N
ILE
84
A
N
ILE
84
A
N
ARG
85
A
N
ARG
85
A
O
THR
50
A
O
THR
50
A
O
PHE
53
A
O
PHE
53
A
N
GLU
63
A
N
GLU
63
1
A
A
H
O
GLY
ILE
38
78
0.68
1
A
A
CD2
HB2
TYR
GLU
37
80
0.81
1
A
A
H
H
VAL
ILE
39
78
0.92
1
A
A
HB
HG13
VAL
ILE
39
78
0.97
1
A
A
HG21
HG13
VAL
ILE
34
84
0.99
1
A
A
H
H
ILE
ILE
36
81
1.03
1
A
A
HG23
HG2
ILE
MET
2
32
1.07
1
A
A
CE1
HG3
TYR
GLU
37
80
1.08
1
A
A
H
HA
VAL
SER
34
83
1.09
1
A
A
HB
HG13
ILE
ILE
36
81
1.17
1
A
A
HB
HG12
ILE
ILE
36
81
1.24
1
A
A
HA
HG
PRO
SER
33
83
1.26
1
A
A
HB1
OE2
ALA
GLU
35
80
1.27
1
A
A
HB
CG1
ILE
ILE
36
81
1.27
1
A
A
HA
O
ALA
ILE
35
81
1.28
1
A
A
HG23
HB
VAL
ILE
39
78
1.28
1
A
A
HA
O
TRP
TRP
41
73
1.29
1
A
A
N
H
VAL
ILE
39
78
1.29
1
A
A
HH
CD
TYR
GLU
37
80
1.31
1
A
A
CD1
HG3
TYR
GLU
37
80
1.33
1
A
A
HD13
HG13
ILE
ILE
36
81
1.35
1
A
A
HH
OE2
TYR
GLU
37
80
1.40
1
A
A
HH
OE1
TYR
GLU
37
80
1.44
1
A
A
CE2
HB2
TYR
GLU
37
80
1.45
1
A
A
HB
CG1
VAL
ILE
39
78
1.51
1
A
A
HG23
CG
ILE
MET
2
32
1.52
1
A
A
O
H
GLY
ASN
45
47
1.53
1
A
A
HB3
O
TYR
HIS
37
79
1.54
1
A
A
H
N
ILE
ILE
36
81
1.55
1
A
A
N
H
ILE
ILE
36
81
1.55
1
A
A
HA
O
TYR
HIS
37
79
1.57
1
A
A
H
N
VAL
ILE
39
78
1.59
1
A
A
N
O
GLY
ILE
38
78
1.64
1
A
A
OH
CD
TYR
GLU
37
80
1.80
1
A
A
CZ
CD
TYR
GLU
37
80
1.82
1
A
A
OH
OE2
TYR
GLU
37
80
1.82
1
A
A
CD2
CB
TYR
GLU
37
80
1.89
1
A
A
CE2
CB
TYR
GLU
37
80
1.94
1
A
A
CE1
CG
TYR
GLU
37
80
1.95
1
A
A
CZ
CG
TYR
GLU
37
80
1.98
1
A
A
CB
O
TYR
HIS
37
79
2.00
1
A
A
CA
O
TRP
TRP
41
73
2.08
1
A
A
CA
O
TYR
HIS
37
79
2.08
1
A
A
OH
OE1
TYR
GLU
37
80
2.11
1
A
A
CB
OE2
ALA
GLU
35
80
2.12
1
A
A
O
O
VAL
LEU
34
82
2.16
1
A
A
O
O
VAL
ILE
34
81
2.19
1
A
A
OE1
OE2
GLU
GLU
14
43
2.19
1
A
ASP
6
-91.63
38.53
1
A
CYS
7
54.99
93.81
1
A
GLU
9
-133.32
-153.49
1
A
SER
11
87.56
66.51
1
A
ASN
28
65.37
145.65
1
A
SER
44
-154.74
82.68
1
A
ASN
46
-67.58
56.04
1
A
ARG
55
-50.28
-70.13
1
A
PRO
60
-72.37
46.12
1
A
PRO
75
-72.30
-87.37
1
A
HIS
77
66.01
98.45
1
A
HIS
79
-46.89
-78.42
ANTIFUNGAL PROTEIN FROM STREPTOMYCES TENDAE TU901, NMR AVERAGE STRUCTURE
1
N
N
disulf
2.068
A
CYS
7
A
SG
CYS
7
1_555
A
CYS
25
A
SG
CYS
25
1_555
ANTIFUNGAL PROTEIN
ALL-BETA, TWO ANTIPARALLEL BETA-SHEETS, PARALLEL BETA-SANDWICH, ANTIFUNGAL PROTEIN
Q9RCK8_STRTE
UNP
1
43
Q9RCK8
INRTDCNENSYLEIHNNEGRDTLCFANAGTMPVAIYGVNWVESGNNVVTLQFQRNLSDPRLETITLQKWGSWNPGHIHEI
LSIRIY
43
128
1GH5
2
87
Q9RCK8
A
1
2
87
1
initiating methionine
MET
1
1GH5
A
Q9RCK8
UNP
1
5
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ARG
4
A
ARG
4
A
THR
5
A
THR
5
A
ASP
22
A
ASP
22
A
PHE
26
A
PHE
26
A
LEU
13
A
LEU
13
A
ASN
17
A
ASN
17
A
VAL
39
A
VAL
39
A
SER
44
A
SER
44
A
GLY
71
A
GLY
71
A
TRP
73
A
TRP
73
A
THR
31
A
THR
31
A
MET
32
A
MET
32
A
GLU
80
A
GLU
80
A
ILE
86
A
ILE
86
A
VAL
49
A
VAL
49
A
GLN
54
A
GLN
54
A
LEU
62
A
LEU
62
A
LEU
67
A
LEU
67
1
P 1