0.010111
0.005838
0.000000
0.000000
0.011675
0.000000
0.000000
0.000000
0.011198
0.00000
0.00000
0.00000
CIS PROLINE - PRO L 144
CIS PROLINE - PRO H 156
CIS PROLINE - PRO H 158
CIS PROLINE - PRO H 198
Bizebard, T.
Knossow, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
98.900
98.900
89.300
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
50
768
777
10.1107/S0907444994001903
15299376
Refined three-dimensional structure of the Fab fragment of a murine IgGl,lambda antibody.
1994
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
22596.021
IGG1-KAPPA HC19 FAB (LIGHT CHAIN)
1
man
polymer
23777.783
IGG1-KAPPA HC19 FAB (HEAVY CHAIN)
1
man
polymer
18.015
water
91
nat
water
no
no
QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGA
QTEDEAIYFCALWYSNHWVFGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQ
GMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHTVEKSLS
QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGA
QTEDEAIYFCALWYSNHWVFGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQ
GMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHTVEKSLS
L
polypeptide(L)
no
no
QVQLKESGPGLVAPSQSLSITCTVSGFLLISNGVHWVRQPPGKGLEWLGVIWAGGNTNYNSALMSRVSISKDNSKSQVFL
KMKSLQTDDTAMYYCARDFYDYDVFYYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVT
VTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP
QVQLKESGPGLVAPSQSLSITCTVSGFLLISNGVHWVRQPPGKGLEWLGVIWAGGNTNYNSALMSRVSISKDNSKSQVFL
KMKSLQTDDTAMYYCARDFYDYDVFYYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVT
VTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP
H
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
sample
10090
Mus musculus
house mouse
sample
10090
Mus musculus
2.72
54.73
repository
Initial release
Version format compliance
Version format compliance
1
0
1994-04-30
1
1
2008-03-24
1
2
2011-07-13
Y
1993-01-20
REL
HOH
water
HOH
3
3
HOH
HOH
211
L
HOH
5
3
HOH
HOH
212
L
HOH
15
3
HOH
HOH
213
L
HOH
16
3
HOH
HOH
214
L
HOH
17
3
HOH
HOH
215
L
HOH
18
3
HOH
HOH
216
L
HOH
19
3
HOH
HOH
217
L
HOH
20
3
HOH
HOH
218
L
HOH
22
3
HOH
HOH
219
L
HOH
24
3
HOH
HOH
220
L
HOH
25
3
HOH
HOH
221
L
HOH
27
3
HOH
HOH
222
L
HOH
29
3
HOH
HOH
223
L
HOH
30
3
HOH
HOH
224
L
HOH
31
3
HOH
HOH
225
L
HOH
33
3
HOH
HOH
226
L
HOH
35
3
HOH
HOH
227
L
HOH
36
3
HOH
HOH
228
L
HOH
39
3
HOH
HOH
229
L
HOH
40
3
HOH
HOH
230
L
HOH
41
3
HOH
HOH
231
L
HOH
43
3
HOH
HOH
232
L
HOH
45
3
HOH
HOH
233
L
HOH
46
3
HOH
HOH
234
L
HOH
47
3
HOH
HOH
235
L
HOH
49
3
HOH
HOH
236
L
HOH
50
3
HOH
HOH
237
L
HOH
52
3
HOH
HOH
238
L
HOH
53
3
HOH
HOH
239
L
HOH
55
3
HOH
HOH
240
L
HOH
56
3
HOH
HOH
241
L
HOH
57
3
HOH
HOH
242
L
HOH
58
3
HOH
HOH
243
L
HOH
60
3
HOH
HOH
244
L
HOH
62
3
HOH
HOH
245
L
HOH
64
3
HOH
HOH
246
L
HOH
68
3
HOH
HOH
247
L
HOH
70
3
HOH
HOH
248
L
HOH
76
3
HOH
HOH
249
L
HOH
77
3
HOH
HOH
250
L
HOH
79
3
HOH
HOH
251
L
HOH
80
3
HOH
HOH
252
L
HOH
81
3
HOH
HOH
253
L
HOH
82
3
HOH
HOH
254
L
HOH
83
3
HOH
HOH
255
L
HOH
84
3
HOH
HOH
256
L
HOH
1
3
HOH
HOH
222
H
HOH
2
3
HOH
HOH
223
H
HOH
4
3
HOH
HOH
224
H
HOH
6
3
HOH
HOH
225
H
HOH
7
3
HOH
HOH
226
H
HOH
8
3
HOH
HOH
227
H
HOH
9
3
HOH
HOH
228
H
HOH
10
3
HOH
HOH
229
H
HOH
11
3
HOH
HOH
230
H
HOH
12
3
HOH
HOH
231
H
HOH
13
3
HOH
HOH
232
H
HOH
14
3
HOH
HOH
233
H
HOH
21
3
HOH
HOH
234
H
HOH
23
3
HOH
HOH
235
H
HOH
26
3
HOH
HOH
236
H
HOH
28
3
HOH
HOH
237
H
HOH
32
3
HOH
HOH
238
H
HOH
34
3
HOH
HOH
239
H
HOH
37
3
HOH
HOH
240
H
HOH
38
3
HOH
HOH
241
H
HOH
42
3
HOH
HOH
242
H
HOH
44
3
HOH
HOH
243
H
HOH
48
3
HOH
HOH
244
H
HOH
51
3
HOH
HOH
245
H
HOH
54
3
HOH
HOH
246
H
HOH
59
3
HOH
HOH
247
H
HOH
61
3
HOH
HOH
248
H
HOH
63
3
HOH
HOH
249
H
HOH
65
3
HOH
HOH
250
H
HOH
66
3
HOH
HOH
251
H
HOH
67
3
HOH
HOH
252
H
HOH
69
3
HOH
HOH
253
H
HOH
71
3
HOH
HOH
254
H
HOH
72
3
HOH
HOH
255
H
HOH
73
3
HOH
HOH
256
H
HOH
74
3
HOH
HOH
257
H
HOH
75
3
HOH
HOH
258
H
HOH
78
3
HOH
HOH
259
H
HOH
85
3
HOH
HOH
260
H
HOH
86
3
HOH
HOH
261
H
HOH
87
3
HOH
HOH
262
H
HOH
88
3
HOH
HOH
263
H
HOH
89
3
HOH
HOH
264
H
HOH
90
3
HOH
HOH
265
H
HOH
91
3
HOH
HOH
266
H
GLN
1
n
1
GLN
1
L
ALA
2
n
2
ALA
2
L
VAL
3
n
3
VAL
3
L
VAL
4
n
4
VAL
4
L
THR
5
n
5
THR
5
L
GLN
6
n
6
GLN
6
L
GLU
7
n
7
GLU
7
L
SER
8
n
8
SER
8
L
ALA
9
n
9
ALA
9
L
LEU
10
n
10
LEU
10
L
THR
11
n
11
THR
11
L
THR
12
n
12
THR
12
L
SER
13
n
13
SER
13
L
PRO
14
n
14
PRO
14
L
GLY
15
n
15
GLY
15
L
GLU
16
n
16
GLU
16
L
THR
17
n
17
THR
17
L
VAL
18
n
18
VAL
18
L
THR
19
n
19
THR
19
L
LEU
20
n
20
LEU
20
L
THR
21
n
21
THR
21
L
CYS
22
n
22
CYS
22
L
ARG
23
n
23
ARG
23
L
SER
24
n
24
SER
24
L
SER
25
n
25
SER
25
L
THR
26
n
26
THR
26
L
GLY
27
n
27
GLY
27
L
ALA
28
n
28
ALA
28
L
VAL
29
n
29
VAL
29
L
THR
30
n
30
THR
30
L
THR
31
n
31
THR
31
L
SER
32
n
32
SER
32
L
ASN
33
n
33
ASN
33
L
TYR
34
n
34
TYR
34
L
ALA
35
n
35
ALA
35
L
ASN
36
n
36
ASN
36
L
TRP
37
n
37
TRP
37
L
VAL
38
n
38
VAL
38
L
GLN
39
n
39
GLN
39
L
GLU
40
n
40
GLU
40
L
LYS
41
n
41
LYS
41
L
PRO
42
n
42
PRO
42
L
ASP
43
n
43
ASP
43
L
HIS
44
n
44
HIS
44
L
LEU
45
n
45
LEU
45
L
PHE
46
n
46
PHE
46
L
THR
47
n
47
THR
47
L
GLY
48
n
48
GLY
48
L
LEU
49
n
49
LEU
49
L
ILE
50
n
50
ILE
50
L
GLY
51
n
51
GLY
51
L
GLY
52
n
52
GLY
52
L
THR
53
n
53
THR
53
L
ASN
54
n
54
ASN
54
L
ASN
55
n
55
ASN
55
L
ARG
56
n
56
ARG
56
L
ALA
57
n
57
ALA
57
L
PRO
58
n
58
PRO
58
L
GLY
59
n
59
GLY
59
L
VAL
60
n
60
VAL
60
L
PRO
61
n
61
PRO
61
L
ALA
62
n
62
ALA
62
L
ARG
63
n
63
ARG
63
L
PHE
64
n
64
PHE
64
L
SER
65
n
65
SER
65
L
GLY
66
n
66
GLY
66
L
SER
67
n
67
SER
67
L
LEU
68
n
68
LEU
68
L
ILE
69
n
69
ILE
69
L
GLY
70
n
70
GLY
70
L
ASP
71
n
71
ASP
71
L
LYS
72
n
72
LYS
72
L
ALA
73
n
73
ALA
73
L
ALA
74
n
74
ALA
74
L
LEU
75
n
75
LEU
75
L
THR
76
n
76
THR
76
L
ILE
77
n
77
ILE
77
L
THR
78
n
78
THR
78
L
GLY
79
n
79
GLY
79
L
ALA
80
n
80
ALA
80
L
GLN
81
n
81
GLN
81
L
THR
82
n
82
THR
82
L
GLU
83
n
83
GLU
83
L
ASP
84
n
84
ASP
84
L
GLU
85
n
85
GLU
85
L
ALA
86
n
86
ALA
86
L
ILE
87
n
87
ILE
87
L
TYR
88
n
88
TYR
88
L
PHE
89
n
89
PHE
89
L
CYS
90
n
90
CYS
90
L
ALA
91
n
91
ALA
91
L
LEU
92
n
92
LEU
92
L
TRP
93
n
93
TRP
93
L
TYR
94
n
94
TYR
94
L
SER
95
n
95
SER
95
L
ASN
96
n
96
ASN
96
L
HIS
97
n
97
HIS
97
L
TRP
98
n
98
TRP
98
L
VAL
99
n
99
VAL
99
L
PHE
100
n
100
PHE
100
L
GLY
101
n
101
GLY
101
L
GLY
102
n
102
GLY
102
L
GLY
103
n
103
GLY
103
L
THR
104
n
104
THR
104
L
LYS
105
n
105
LYS
105
L
LEU
106
n
106
LEU
106
L
THR
107
n
107
THR
107
L
VAL
108
n
108
VAL
108
L
LEU
109
n
109
LEU
109
L
GLY
110
n
110
GLY
110
L
GLN
111
n
111
GLN
111
L
PRO
112
n
112
PRO
112
L
LYS
113
n
113
LYS
113
L
SER
114
n
114
SER
114
L
SER
115
n
115
SER
115
L
PRO
116
n
116
PRO
116
L
SER
117
n
117
SER
117
L
VAL
118
n
118
VAL
118
L
THR
119
n
119
THR
119
L
LEU
120
n
120
LEU
120
L
PHE
121
n
121
PHE
121
L
PRO
122
n
122
PRO
122
L
PRO
123
n
123
PRO
123
L
SER
124
n
124
SER
124
L
SER
125
n
125
SER
125
L
GLU
126
n
126
GLU
126
L
GLU
127
n
127
GLU
127
L
LEU
128
n
128
LEU
128
L
GLU
129
n
129
GLU
129
L
THR
130
n
130
THR
130
L
ASN
131
n
131
ASN
131
L
LYS
132
n
132
LYS
132
L
ALA
133
n
133
ALA
133
L
THR
134
n
134
THR
134
L
LEU
135
n
135
LEU
135
L
VAL
136
n
136
VAL
136
L
CYS
137
n
137
CYS
137
L
THR
138
n
138
THR
138
L
ILE
139
n
139
ILE
139
L
THR
140
n
140
THR
140
L
ASP
141
n
141
ASP
141
L
PHE
142
n
142
PHE
142
L
TYR
143
n
143
TYR
143
L
PRO
144
n
144
PRO
144
L
GLY
145
n
145
GLY
145
L
VAL
146
n
146
VAL
146
L
VAL
147
n
147
VAL
147
L
THR
148
n
148
THR
148
L
VAL
149
n
149
VAL
149
L
ASP
150
n
150
ASP
150
L
TRP
151
n
151
TRP
151
L
LYS
152
n
152
LYS
152
L
VAL
153
n
153
VAL
153
L
ASP
154
n
154
ASP
154
L
GLY
155
n
155
GLY
155
L
THR
156
n
156
THR
156
L
PRO
157
n
157
PRO
157
L
VAL
158
n
158
VAL
158
L
THR
159
n
159
THR
159
L
GLN
160
n
160
GLN
160
L
GLY
161
n
161
GLY
161
L
MET
162
n
162
MET
162
L
GLU
163
n
163
GLU
163
L
THR
164
n
164
THR
164
L
THR
165
n
165
THR
165
L
GLN
166
n
166
GLN
166
L
PRO
167
n
167
PRO
167
L
SER
168
n
168
SER
168
L
LYS
169
n
169
LYS
169
L
GLN
170
n
170
GLN
170
L
SER
171
n
171
SER
171
L
ASN
172
n
172
ASN
172
L
ASN
173
n
173
ASN
173
L
LYS
174
n
174
LYS
174
L
TYR
175
n
175
TYR
175
L
MET
176
n
176
MET
176
L
ALA
177
n
177
ALA
177
L
SER
178
n
178
SER
178
L
SER
179
n
179
SER
179
L
TYR
180
n
180
TYR
180
L
LEU
181
n
181
LEU
181
L
THR
182
n
182
THR
182
L
LEU
183
n
183
LEU
183
L
THR
184
n
184
THR
184
L
ALA
185
n
185
ALA
185
L
ARG
186
n
186
ARG
186
L
ALA
187
n
187
ALA
187
L
TRP
188
n
188
TRP
188
L
GLU
189
n
189
GLU
189
L
ARG
190
n
190
ARG
190
L
HIS
191
n
191
HIS
191
L
SER
192
n
192
SER
192
L
SER
193
n
193
SER
193
L
TYR
194
n
194
TYR
194
L
SER
195
n
195
SER
195
L
CYS
196
n
196
CYS
196
L
GLN
197
n
197
GLN
197
L
VAL
198
n
198
VAL
198
L
THR
199
n
199
THR
199
L
HIS
200
n
200
HIS
200
L
GLU
201
n
201
GLU
201
L
GLY
202
n
202
GLY
202
L
HIS
203
n
203
HIS
203
L
THR
204
n
204
THR
204
L
VAL
205
n
205
VAL
205
L
GLU
206
n
206
GLU
206
L
LYS
207
n
207
LYS
207
L
SER
208
n
208
SER
208
L
LEU
209
n
209
LEU
209
L
SER
210
n
210
SER
210
L
GLN
1
n
1
GLN
1
H
VAL
2
n
2
VAL
2
H
GLN
3
n
3
GLN
3
H
LEU
4
n
4
LEU
4
H
LYS
5
n
5
LYS
5
H
GLU
6
n
6
GLU
6
H
SER
7
n
7
SER
7
H
GLY
8
n
8
GLY
8
H
PRO
9
n
9
PRO
9
H
GLY
10
n
10
GLY
10
H
LEU
11
n
11
LEU
11
H
VAL
12
n
12
VAL
12
H
ALA
13
n
13
ALA
13
H
PRO
14
n
14
PRO
14
H
SER
15
n
15
SER
15
H
GLN
16
n
16
GLN
16
H
SER
17
n
17
SER
17
H
LEU
18
n
18
LEU
18
H
SER
19
n
19
SER
19
H
ILE
20
n
20
ILE
20
H
THR
21
n
21
THR
21
H
CYS
22
n
22
CYS
22
H
THR
23
n
23
THR
23
H
VAL
24
n
24
VAL
24
H
SER
25
n
25
SER
25
H
GLY
26
n
26
GLY
26
H
PHE
27
n
27
PHE
27
H
LEU
28
n
28
LEU
28
H
LEU
29
n
29
LEU
29
H
ILE
30
n
30
ILE
30
H
SER
31
n
31
SER
31
H
ASN
32
n
32
ASN
32
H
GLY
33
n
33
GLY
33
H
VAL
34
n
34
VAL
34
H
HIS
35
n
35
HIS
35
H
TRP
36
n
36
TRP
36
H
VAL
37
n
37
VAL
37
H
ARG
38
n
38
ARG
38
H
GLN
39
n
39
GLN
39
H
PRO
40
n
40
PRO
40
H
PRO
41
n
41
PRO
41
H
GLY
42
n
42
GLY
42
H
LYS
43
n
43
LYS
43
H
GLY
44
n
44
GLY
44
H
LEU
45
n
45
LEU
45
H
GLU
46
n
46
GLU
46
H
TRP
47
n
47
TRP
47
H
LEU
48
n
48
LEU
48
H
GLY
49
n
49
GLY
49
H
VAL
50
n
50
VAL
50
H
ILE
51
n
51
ILE
51
H
TRP
52
n
52
TRP
52
H
ALA
53
n
53
ALA
53
H
GLY
54
n
54
GLY
54
H
GLY
55
n
55
GLY
55
H
ASN
56
n
56
ASN
56
H
THR
57
n
57
THR
57
H
ASN
58
n
58
ASN
58
H
TYR
59
n
59
TYR
59
H
ASN
60
n
60
ASN
60
H
SER
61
n
61
SER
61
H
ALA
62
n
62
ALA
62
H
LEU
63
n
63
LEU
63
H
MET
64
n
64
MET
64
H
SER
65
n
65
SER
65
H
ARG
66
n
66
ARG
66
H
VAL
67
n
67
VAL
67
H
SER
68
n
68
SER
68
H
ILE
69
n
69
ILE
69
H
SER
70
n
70
SER
70
H
LYS
71
n
71
LYS
71
H
ASP
72
n
72
ASP
72
H
ASN
73
n
73
ASN
73
H
SER
74
n
74
SER
74
H
LYS
75
n
75
LYS
75
H
SER
76
n
76
SER
76
H
GLN
77
n
77
GLN
77
H
VAL
78
n
78
VAL
78
H
PHE
79
n
79
PHE
79
H
LEU
80
n
80
LEU
80
H
LYS
81
n
81
LYS
81
H
MET
82
n
82
MET
82
H
LYS
83
n
83
LYS
83
H
SER
84
n
84
SER
84
H
LEU
85
n
85
LEU
85
H
GLN
86
n
86
GLN
86
H
THR
87
n
87
THR
87
H
ASP
88
n
88
ASP
88
H
ASP
89
n
89
ASP
89
H
THR
90
n
90
THR
90
H
ALA
91
n
91
ALA
91
H
MET
92
n
92
MET
92
H
TYR
93
n
93
TYR
93
H
TYR
94
n
94
TYR
94
H
CYS
95
n
95
CYS
95
H
ALA
96
n
96
ALA
96
H
ARG
97
n
97
ARG
97
H
ASP
98
n
98
ASP
98
H
PHE
99
n
99
PHE
99
H
TYR
100
n
100
TYR
100
H
ASP
101
n
101
ASP
101
H
TYR
102
n
102
TYR
102
H
ASP
103
n
103
ASP
103
H
VAL
104
n
104
VAL
104
H
PHE
105
n
105
PHE
105
H
TYR
106
n
106
TYR
106
H
TYR
107
n
107
TYR
107
H
ALA
108
n
108
ALA
108
H
MET
109
n
109
MET
109
H
ASP
110
n
110
ASP
110
H
TYR
111
n
111
TYR
111
H
TRP
112
n
112
TRP
112
H
GLY
113
n
113
GLY
113
H
GLN
114
n
114
GLN
114
H
GLY
115
n
115
GLY
115
H
THR
116
n
116
THR
116
H
SER
117
n
117
SER
117
H
VAL
118
n
118
VAL
118
H
THR
119
n
119
THR
119
H
VAL
120
n
120
VAL
120
H
SER
121
n
121
SER
121
H
SER
122
n
122
SER
122
H
ALA
123
n
123
ALA
123
H
LYS
124
n
124
LYS
124
H
THR
125
n
125
THR
125
H
THR
126
n
126
THR
126
H
PRO
127
n
127
PRO
127
H
PRO
128
n
128
PRO
128
H
SER
129
n
129
SER
129
H
VAL
130
n
130
VAL
130
H
TYR
131
n
131
TYR
131
H
PRO
132
n
132
PRO
132
H
LEU
133
n
133
LEU
133
H
ALA
134
n
134
ALA
134
H
PRO
135
n
135
PRO
135
H
GLY
136
n
136
GLY
136
H
SER
137
n
137
SER
137
H
ALA
138
n
138
ALA
138
H
ALA
139
n
139
ALA
139
H
GLN
140
n
140
GLN
140
H
THR
141
n
141
THR
141
H
ASN
142
n
142
ASN
142
H
SER
143
n
143
SER
143
H
MET
144
n
144
MET
144
H
VAL
145
n
145
VAL
145
H
THR
146
n
146
THR
146
H
LEU
147
n
147
LEU
147
H
GLY
148
n
148
GLY
148
H
CYS
149
n
149
CYS
149
H
LEU
150
n
150
LEU
150
H
VAL
151
n
151
VAL
151
H
LYS
152
n
152
LYS
152
H
GLY
153
n
153
GLY
153
H
TYR
154
n
154
TYR
154
H
PHE
155
n
155
PHE
155
H
PRO
156
n
156
PRO
156
H
GLU
157
n
157
GLU
157
H
PRO
158
n
158
PRO
158
H
VAL
159
n
159
VAL
159
H
THR
160
n
160
THR
160
H
VAL
161
n
161
VAL
161
H
THR
162
n
162
THR
162
H
TRP
163
n
163
TRP
163
H
ASN
164
n
164
ASN
164
H
SER
165
n
165
SER
165
H
GLY
166
n
166
GLY
166
H
SER
167
n
167
SER
167
H
LEU
168
n
168
LEU
168
H
SER
169
n
169
SER
169
H
SER
170
n
170
SER
170
H
GLY
171
n
171
GLY
171
H
VAL
172
n
172
VAL
172
H
HIS
173
n
173
HIS
173
H
THR
174
n
174
THR
174
H
PHE
175
n
175
PHE
175
H
PRO
176
n
176
PRO
176
H
ALA
177
n
177
ALA
177
H
VAL
178
n
178
VAL
178
H
LEU
179
n
179
LEU
179
H
GLN
180
n
180
GLN
180
H
SER
181
n
181
SER
181
H
ASP
182
n
182
ASP
182
H
LEU
183
n
183
LEU
183
H
TYR
184
n
184
TYR
184
H
THR
185
n
185
THR
185
H
LEU
186
n
186
LEU
186
H
SER
187
n
187
SER
187
H
SER
188
n
188
SER
188
H
SER
189
n
189
SER
189
H
VAL
190
n
190
VAL
190
H
THR
191
n
191
THR
191
H
VAL
192
n
192
VAL
192
H
PRO
193
n
193
PRO
193
H
SER
194
n
194
SER
194
H
SER
195
n
195
SER
195
H
THR
196
n
196
THR
196
H
TRP
197
n
197
TRP
197
H
PRO
198
n
198
PRO
198
H
SER
199
n
199
SER
199
H
GLU
200
n
200
GLU
200
H
THR
201
n
201
THR
201
H
VAL
202
n
202
VAL
202
H
THR
203
n
203
THR
203
H
CYS
204
n
204
CYS
204
H
ASN
205
n
205
ASN
205
H
VAL
206
n
206
VAL
206
H
ALA
207
n
207
ALA
207
H
HIS
208
n
208
HIS
208
H
PRO
209
n
209
PRO
209
H
ALA
210
n
210
ALA
210
H
SER
211
n
211
SER
211
H
SER
212
n
212
SER
212
H
THR
213
n
213
THR
213
H
LYS
214
n
214
LYS
214
H
VAL
215
n
215
VAL
215
H
ASP
216
n
216
ASP
216
H
LYS
217
n
217
LYS
217
H
LYS
218
n
218
LYS
218
H
ILE
219
n
219
ILE
219
H
VAL
220
n
220
VAL
220
H
PRO
221
n
221
PRO
221
H
author_and_software_defined_assembly
PISA
2
dimeric
3390
-27
19630
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
L
O
THR
5
A
O
THR
5
L
N
ARG
23
A
N
ARG
23
L
N
CYS
22
A
N
CYS
22
L
O
ALA
73
A
O
ALA
73
L
N
THR
76
A
N
THR
76
L
O
SER
65
A
O
SER
65
L
N
ASN
55
A
N
ASN
55
L
O
GLY
51
A
O
GLY
51
L
N
LEU
49
A
N
LEU
49
L
O
TRP
37
A
O
TRP
37
L
N
GLU
40
A
N
GLU
40
L
O
ILE
87
A
O
ILE
87
L
N
LEU
92
A
N
LEU
92
L
O
VAL
99
A
O
VAL
99
L
N
ASN
55
A
N
ASN
55
L
O
GLY
51
A
O
GLY
51
L
N
LEU
49
A
N
LEU
49
L
O
TRP
37
A
O
TRP
37
L
N
GLU
40
A
N
GLU
40
L
O
ILE
87
A
O
ILE
87
L
N
TYR
88
A
N
TYR
88
L
O
THR
104
A
O
THR
104
L
O
LYS
105
A
O
LYS
105
L
N
LEU
10
A
N
LEU
10
L
N
PHE
121
A
N
PHE
121
L
O
VAL
136
A
O
VAL
136
L
O
PHE
142
A
O
PHE
142
L
N
TYR
175
A
N
TYR
175
L
N
TYR
180
A
N
TYR
180
L
O
GLU
163
A
O
GLU
163
L
N
PHE
121
A
N
PHE
121
L
O
VAL
136
A
O
VAL
136
L
O
PHE
142
A
O
PHE
142
L
N
TYR
175
A
N
TYR
175
L
O
MET
176
A
O
MET
176
L
N
SER
168
A
N
SER
168
L
O
THR
156
A
O
THR
156
L
N
VAL
153
A
N
VAL
153
L
O
LYS
152
A
O
LYS
152
L
N
SER
195
A
N
SER
195
L
N
HIS
200
A
N
HIS
200
L
O
HIS
203
A
O
HIS
203
H
O
SER
7
B
O
SER
7
H
N
THR
21
B
N
THR
21
H
N
CYS
22
B
N
CYS
22
H
O
VAL
78
B
O
VAL
78
H
N
LYS
81
B
N
LYS
81
H
O
SER
68
B
O
SER
68
H
O
ASN
58
B
O
ASN
58
H
N
VAL
50
B
N
VAL
50
H
O
ILE
51
B
O
ILE
51
H
N
VAL
34
B
N
VAL
34
H
N
GLN
39
B
N
GLN
39
H
O
MET
92
B
O
MET
92
H
N
PHE
99
B
N
PHE
99
H
O
ALA
108
B
O
ALA
108
H
O
ASN
58
B
O
ASN
58
H
N
VAL
50
B
N
VAL
50
H
O
ILE
51
B
O
ILE
51
H
N
VAL
34
B
N
VAL
34
H
N
GLN
39
B
N
GLN
39
H
O
MET
92
B
O
MET
92
H
N
TYR
93
B
N
TYR
93
H
O
THR
116
B
O
THR
116
H
O
THR
119
B
O
THR
119
H
N
VAL
12
B
N
VAL
12
H
N
LEU
133
B
N
LEU
133
H
O
GLY
148
B
O
GLY
148
H
O
TYR
154
B
O
TYR
154
H
N
TYR
184
B
N
TYR
184
H
N
SER
189
B
N
SER
189
H
O
HIS
173
B
O
HIS
173
H
N
LEU
133
B
N
LEU
133
H
O
GLY
148
B
O
GLY
148
H
O
TYR
154
B
O
TYR
154
H
N
TYR
184
B
N
TYR
184
H
O
THR
185
B
O
THR
185
H
N
VAL
178
B
N
VAL
178
H
O
THR
162
B
O
THR
162
H
N
ASN
205
B
N
ASN
205
H
N
HIS
208
B
N
HIS
208
H
O
THR
213
B
O
THR
213
1
-19.18
2.70
111.00
91.82
L
L
L
N
CA
C
ALA
ALA
ALA
2
2
2
N
1
17.62
2.30
115.30
132.92
L
L
L
CA
CB
CG
LEU
LEU
LEU
20
20
20
N
1
10.98
1.40
123.60
134.58
L
L
L
CD
NE
CZ
ARG
ARG
ARG
23
23
23
N
1
5.13
0.50
120.30
125.43
L
L
L
NE
CZ
NH1
ARG
ARG
ARG
23
23
23
N
1
-4.68
0.50
120.30
115.62
L
L
L
NE
CZ
NH2
ARG
ARG
ARG
23
23
23
N
1
9.64
1.40
112.40
122.04
L
L
L
CA
CB
CG2
THR
THR
THR
30
30
30
N
1
13.29
2.00
110.40
123.69
L
L
L
CB
CA
C
ASP
ASP
ASP
43
43
43
N
1
6.63
0.50
120.30
126.93
L
L
L
NE
CZ
NH1
ARG
ARG
ARG
56
56
56
N
1
4.30
0.50
120.30
124.60
L
L
L
NE
CZ
NH1
ARG
ARG
ARG
63
63
63
N
1
15.41
2.30
115.30
130.71
L
L
L
CA
CB
CG
LEU
LEU
LEU
135
135
135
N
1
7.92
0.90
118.30
126.22
L
L
L
CB
CG
OD1
ASP
ASP
ASP
141
141
141
N
1
6.55
0.90
118.30
124.85
L
L
L
CB
CG
OD1
ASP
ASP
ASP
150
150
150
N
1
7.38
0.90
118.30
125.68
L
L
L
CB
CG
OD1
ASP
ASP
ASP
154
154
154
N
1
-9.01
1.50
110.50
101.49
L
L
L
N
CA
CB
SER
SER
SER
178
178
178
N
1
-4.13
0.50
120.30
116.17
L
L
L
NE
CZ
NH2
ARG
ARG
ARG
186
186
186
N
1
-12.09
2.00
110.40
98.31
H
H
H
CB
CA
C
LYS
LYS
LYS
5
5
5
N
1
15.94
2.60
111.60
127.54
H
H
H
CB
CG
CD
ARG
ARG
ARG
38
38
38
N
1
-3.30
0.50
120.30
117.00
H
H
H
NE
CZ
NH2
ARG
ARG
ARG
38
38
38
N
1
-5.36
0.50
120.30
114.94
H
H
H
NE
CZ
NH2
ARG
ARG
ARG
66
66
66
N
1
6.67
0.90
118.30
124.97
H
H
H
CB
CG
OD1
ASP
ASP
ASP
98
98
98
N
1
8.32
0.90
118.30
126.62
H
H
H
CB
CG
OD1
ASP
ASP
ASP
110
110
110
N
1
L
ALA
2
78.77
77.32
1
L
ASP
43
73.61
74.34
1
L
HIS
44
30.50
59.41
1
L
THR
53
71.55
-54.93
1
L
SER
95
57.95
-35.55
1
L
GLU
201
39.15
65.67
1
H
GLN
16
-119.78
-161.63
1
H
MET
64
-3.34
-59.09
1
H
TYR
100
-146.34
-0.51
1
H
SER
137
-61.17
86.43
1
H
ASN
142
-173.93
-148.80
1
H
SER
170
-59.38
107.59
0.195
2.3
7.0
20393
1
2.0
2.3
7.0
91
3352
0
0
3261
0.012
0.02
0.043
0.04
0.046
0.05
1.49
1.0
2.55
1.5
1.81
1.0
2.94
1.5
0.013
0.02
0.14
0.15
0.17
0.3
0.25
0.3
0.16
0.3
2.3
3.
20.7
15.
17.2
20.
model building
X-PLOR
refinement
PROLSQ
refinement
X-PLOR
phasing
X-PLOR
IGG1 FAB FRAGMENT (HC19)
REFINED THREE-DIMENSIONAL STRUCTURE OF THE FAB FRAGMENT OF A MURINE IGG1, LAMBDA ANTIBODY
1
N
N
2
N
N
3
N
N
3
N
N
L
THR
30
A
THR
30
HELX_P
L
TYR
34
A
TYR
34
5
1
5
L
GLN
81
A
GLN
81
HELX_P
L
GLU
85
A
GLU
85
5
2
5
L
SER
124
A
SER
124
HELX_P
L
THR
130
A
THR
130
1
3
7
L
ALA
185
A
ALA
185
HELX_P
L
HIS
191
A
HIS
191
1
4
7
H
GLN
86
B
GLN
86
HELX_P
H
THR
90
B
THR
90
5
5
5
H
PRO
209
B
PRO
209
HELX_P
H
SER
212
B
SER
212
5
6
4
disulf
1.970
L
CYS
22
A
SG
CYS
22
1_555
L
CYS
90
A
SG
CYS
90
1_555
disulf
2.033
L
CYS
137
A
SG
CYS
137
1_555
L
CYS
196
A
SG
CYS
196
1_555
disulf
2.002
H
CYS
22
B
SG
CYS
22
1_555
H
CYS
95
B
SG
CYS
95
1_555
disulf
2.058
H
CYS
149
B
SG
CYS
149
1_555
H
CYS
204
B
SG
CYS
204
1_555
IMMUNOGLOBULIN
IMMUNOGLOBULIN
L
TYR
143
A
TYR
143
1
L
PRO
144
A
PRO
144
-1.08
H
PHE
155
B
PHE
155
1
H
PRO
156
B
PRO
156
-2.77
H
GLU
157
B
GLU
157
1
H
PRO
158
B
PRO
158
-2.84
H
TRP
197
B
TRP
197
1
H
PRO
198
B
PRO
198
1.42
AAA39089
GB
1
1
387376
MAWISLILSLLALSSGAISQAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVP
ARFSGSLIGDKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITD
FYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGHTVEKSLSRADCS
AAD00000
GB
2
1
4096752
QVKLQESGPGLVAPSQSLSITCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWAGGNTNYNSAHMSRVSFSKDNSKSQVFL
KMNSLQTDDTALYYCARDHGVYWGQGTLVTVSAAKTTPPSVYPLASGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS
SGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDV
LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA
PIEKTISKTKGRPKAPQVYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMDSDGSYFVYSKL
NVQKSNWEAGNTFTCSVLHEGLHNHHTEKSLSHSPGK
20
229
1GIG
1
210
387376
L
1
1
210
1
212
1GIG
1
221
4096752
H
2
1
221
2
LYS
CONFLICT
GLN
3
1GIG
H
4096752
GB
3
3
2
GLN
CONFLICT
LYS
5
1GIG
H
4096752
GB
5
5
2
SER
CONFLICT
LEU
28
1GIG
H
4096752
GB
28
28
2
THR
CONFLICT
ILE
30
1GIG
H
4096752
GB
30
30
2
TYR
CONFLICT
ASN
32
1GIG
H
4096752
GB
32
32
2
HIS
CONFLICT
LEU
63
1GIG
H
4096752
GB
63
63
2
PHE
CONFLICT
ILE
69
1GIG
H
4096752
GB
69
69
2
ASN
CONFLICT
LYS
83
1GIG
H
4096752
GB
83
83
2
LEU
CONFLICT
MET
92
1GIG
H
4096752
GB
92
92
2
INSERTION
ASP
98
1GIG
H
4096752
GB
98
2
INSERTION
PHE
99
1GIG
H
4096752
GB
99
2
INSERTION
TYR
100
1GIG
H
4096752
GB
100
2
HIS
CONFLICT
TYR
102
1GIG
H
4096752
GB
99
102
2
GLY
CONFLICT
ASP
103
1GIG
H
4096752
GB
100
103
2
INSERTION
PHE
105
1GIG
H
4096752
GB
105
2
INSERTION
TYR
106
1GIG
H
4096752
GB
106
2
INSERTION
TYR
107
1GIG
H
4096752
GB
107
2
INSERTION
ALA
108
1GIG
H
4096752
GB
108
2
INSERTION
MET
109
1GIG
H
4096752
GB
109
2
INSERTION
ASP
110
1GIG
H
4096752
GB
110
2
LEU
CONFLICT
SER
117
1GIG
H
4096752
GB
108
117
2
ALA
CONFLICT
SER
122
1GIG
H
4096752
GB
113
122
2
SER
CONFLICT
PRO
135
1GIG
H
4096752
GB
126
135
4
5
6
4
4
4
4
5
6
4
4
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
L
VAL
4
A
VAL
4
L
GLN
6
A
GLN
6
L
THR
17
A
THR
17
L
SER
24
A
SER
24
L
LYS
72
A
LYS
72
L
THR
78
A
THR
78
L
PHE
64
A
PHE
64
L
ILE
69
A
ILE
69
L
ASN
55
A
ASN
55
L
ARG
56
A
ARG
56
L
LEU
45
A
LEU
45
L
GLY
51
A
GLY
51
L
ASN
36
A
ASN
36
L
LYS
41
A
LYS
41
L
ALA
86
A
ALA
86
L
TRP
93
A
TRP
93
L
TRP
98
A
TRP
98
L
PHE
100
A
PHE
100
L
ASN
55
A
ASN
55
L
ARG
56
A
ARG
56
L
LEU
45
A
LEU
45
L
GLY
51
A
GLY
51
L
ASN
36
A
ASN
36
L
LYS
41
A
LYS
41
L
ALA
86
A
ALA
86
L
TRP
93
A
TRP
93
L
THR
104
A
THR
104
L
VAL
108
A
VAL
108
L
ALA
9
A
ALA
9
L
THR
12
A
THR
12
L
SER
117
A
SER
117
L
PHE
121
A
PHE
121
L
LYS
132
A
LYS
132
L
PHE
142
A
PHE
142
L
TYR
175
A
TYR
175
L
THR
184
A
THR
184
L
MET
162
A
MET
162
L
THR
164
A
THR
164
L
SER
117
A
SER
117
L
PHE
121
A
PHE
121
L
LYS
132
A
LYS
132
L
PHE
142
A
PHE
142
L
TYR
175
A
TYR
175
L
THR
184
A
THR
184
L
SER
168
A
SER
168
L
LYS
169
A
LYS
169
L
THR
156
A
THR
156
L
PRO
157
A
PRO
157
L
THR
148
A
THR
148
L
VAL
153
A
VAL
153
L
TYR
194
A
TYR
194
L
HIS
200
A
HIS
200
L
HIS
203
A
HIS
203
L
LEU
209
A
LEU
209
H
GLN
3
B
GLN
3
H
SER
7
B
SER
7
H
LEU
18
B
LEU
18
H
SER
25
B
SER
25
H
GLN
77
B
GLN
77
H
MET
82
B
MET
82
H
VAL
67
B
VAL
67
H
ASP
72
B
ASP
72
H
THR
57
B
THR
57
H
TYR
59
B
TYR
59
H
GLU
46
B
GLU
46
H
ILE
51
B
ILE
51
H
GLY
33
B
GLY
33
H
GLN
39
B
GLN
39
H
ALA
91
B
ALA
91
H
PHE
99
B
PHE
99
H
ALA
108
B
ALA
108
H
TRP
112
B
TRP
112
H
THR
57
B
THR
57
H
TYR
59
B
TYR
59
H
GLU
46
B
GLU
46
H
ILE
51
B
ILE
51
H
GLY
33
B
GLY
33
H
GLN
39
B
GLN
39
H
ALA
91
B
ALA
91
H
PHE
99
B
PHE
99
H
THR
116
B
THR
116
H
VAL
120
B
VAL
120
H
LEU
11
B
LEU
11
H
VAL
12
B
VAL
12
H
SER
129
B
SER
129
H
LEU
133
B
LEU
133
H
MET
144
B
MET
144
H
TYR
154
B
TYR
154
H
TYR
184
B
TYR
184
H
PRO
193
B
PRO
193
H
VAL
172
B
VAL
172
H
THR
174
B
THR
174
H
SER
129
B
SER
129
H
LEU
133
B
LEU
133
H
MET
144
B
MET
144
H
TYR
154
B
TYR
154
H
TYR
184
B
TYR
184
H
PRO
193
B
PRO
193
H
VAL
178
B
VAL
178
H
LEU
179
B
LEU
179
H
THR
160
B
THR
160
H
TRP
163
B
TRP
163
H
VAL
202
B
VAL
202
H
HIS
208
B
HIS
208
H
THR
213
B
THR
213
H
ILE
219
B
ILE
219
152
P 31 2 1