1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Johansson, M.U. Frick, I.M. Nilsson, H. Kraulis, P.J. Hober, S. Jonasson, P. Nygren, A.P. Uhlen, M. Bjorck, L. Drakenberg, T. Forsen, S. Wikstrom, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US J.Biol.Chem. JBCHA3 0071 0021-9258 277 8114 10.1074/JBC.M109943200 11751858 Structure, Specificity, and Mode of Interaction for Bacterial Albumin-Binding Modules 2002 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 7111.089 IMMUNOGLOBULIN G BINDING PROTEIN G ALBUMIN-BINDING DOMAIN RESIDUES 254-299 1 man polymer ABD, ALBUMIN-BINDING DOMAIN OF PROTEIN G, IGG BINDING PROTEIN G no no MKAIFVLNAQHDEAVDANSLAEAKVLANRELDKYGVSDYYKNLINNAKTVEGVKALIDEILAALP MKAIFVLNAQHDEAVDANSLAEAKVLANRELDKYGVSDYYKNLINNAKTVEGVKALIDEILAALP A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n GROUP G STREPTOCOCCI sample 1306 STREPTOCOCCUS SP. 562 ESCHERICHIA COLI repository Initial release Derived calculations Structure summary Version format compliance 1 0 2001-08-09 1 1 2015-04-08 DELTA1.5: A COMPUTATIONALLY DESIGNED CORE VARIANT OF THE B1DOMAIN OF STREPTOCOCCAL PROTEIN G DELTA0: A COMPUTATIONALLY DESIGNED CORE VARIANT OF THE B1DOMAIN OF STREPTOCOCCAL PROTEIN G HYPERTHERMOPHILIC VARIANT OF THE B1 DOMAIN FROMSTREPTOCOCCAL PROTEIN G, NMR, 47 STRUCTURES SOLUTION STRUCTURE OF THE ALBUMIN BINDING DOMAIN OF STREPTOCOCCAL PROTEIN G NMR STRUCTURE OF DFF40 AND DFF45 N- TERMINAL DOMAIN COMPLEX GB3 SOLUTION STRUCTURE OBTAINED BY REFINEMENT OF X-RAYSTRUCTURE WITH DIPOLAR COUPLINGS GB3 SOLUTION STRUCTURE OBTAINED BY REFINEMENT OF X-RAYSTRUCTURE WITH DIPOLAR COUPLINGS PDBE Y PDBE 2001-08-02 REL RESIDUES 1 TO 19 ARE DERIVED FROM THE CLONING CONSTRUCT (KRAULIS ET AL., FEBS LETTERS (1996) 378, 190-194 THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR SPECTROSCOPY ON 13C, 15N-LABELED ABD. LEAST RESTRAINT VIOLATION 100 30 HNCACB CBCA(CO)NH 3D HCC(CO)NH-TOCSY 3D CC(CO)NH-TOCSY 15N- 13C EDITED 3D NOESY 7.2 pH 1 atm 300 K REFINEMENT CAN BE FOUND IN THE JRNL CITATION ABOVE. DISTANCE GEOMETRY AND RESTRAINED SIMULATED ANNEALING 15 BRUNGER refinement X-PLOR 3.8 structure solution XPLOR 600 Varian UNITY MET 1 n 1 MET 1 A LYS 2 n 2 LYS 2 A ALA 3 n 3 ALA 3 A ILE 4 n 4 ILE 4 A PHE 5 n 5 PHE 5 A VAL 6 n 6 VAL 6 A LEU 7 n 7 LEU 7 A ASN 8 n 8 ASN 8 A ALA 9 n 9 ALA 9 A GLN 10 n 10 GLN 10 A HIS 11 n 11 HIS 11 A ASP 12 n 12 ASP 12 A GLU 13 n 13 GLU 13 A ALA 14 n 14 ALA 14 A VAL 15 n 15 VAL 15 A ASP 16 n 16 ASP 16 A ALA 17 n 17 ALA 17 A ASN 18 n 18 ASN 18 A SER 19 n 19 SER 19 A LEU 20 n 20 LEU 20 A ALA 21 n 21 ALA 21 A GLU 22 n 22 GLU 22 A ALA 23 n 23 ALA 23 A LYS 24 n 24 LYS 24 A VAL 25 n 25 VAL 25 A LEU 26 n 26 LEU 26 A ALA 27 n 27 ALA 27 A ASN 28 n 28 ASN 28 A ARG 29 n 29 ARG 29 A GLU 30 n 30 GLU 30 A LEU 31 n 31 LEU 31 A ASP 32 n 32 ASP 32 A LYS 33 n 33 LYS 33 A TYR 34 n 34 TYR 34 A GLY 35 n 35 GLY 35 A VAL 36 n 36 VAL 36 A SER 37 n 37 SER 37 A ASP 38 n 38 ASP 38 A TYR 39 n 39 TYR 39 A TYR 40 n 40 TYR 40 A LYS 41 n 41 LYS 41 A ASN 42 n 42 ASN 42 A LEU 43 n 43 LEU 43 A ILE 44 n 44 ILE 44 A ASN 45 n 45 ASN 45 A ASN 46 n 46 ASN 46 A ALA 47 n 47 ALA 47 A LYS 48 n 48 LYS 48 A THR 49 n 49 THR 49 A VAL 50 n 50 VAL 50 A GLU 51 n 51 GLU 51 A GLY 52 n 52 GLY 52 A VAL 53 n 53 VAL 53 A LYS 54 n 54 LYS 54 A ALA 55 n 55 ALA 55 A LEU 56 n 56 LEU 56 A ILE 57 n 57 ILE 57 A ASP 58 n 58 ASP 58 A GLU 59 n 59 GLU 59 A ILE 60 n 60 ILE 60 A LEU 61 n 61 LEU 61 A ALA 62 n 62 ALA 62 A ALA 63 n 63 ALA 63 A LEU 64 n 64 LEU 64 A PRO 65 n 65 PRO 65 A software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 2 A A O H SER LYS 37 41 1.60 3 A A O H ASN GLU 18 22 1.56 4 A A O H ILE ALA 44 47 1.48 5 A A O H ILE LEU 57 61 1.58 6 A A OD1 HZ3 ASN LYS 28 41 1.39 6 A A O H LYS ASN 24 28 1.50 8 A A O H ALA VAL 21 25 1.46 9 A A O H LYS ASN 24 28 1.46 10 A A O H LEU GLY 31 35 1.55 12 A A O H LEU GLY 31 35 1.48 12 A A O H ILE LEU 57 61 1.60 16 A A O H LYS ASN 24 28 1.56 16 A A O H ASN GLU 18 22 1.58 17 A A O H ALA VAL 21 25 1.49 17 A A O H LEU GLY 31 35 1.60 19 A A O H ALA VAL 21 25 1.52 19 A A HZ2 O LYS ALA 24 47 1.56 19 A A O H ILE LEU 57 61 1.58 20 A A O H GLU LEU 22 26 1.51 20 A A OD1 H ASP ASN 16 18 1.55 22 A A HD1 H HIS ASP 11 12 1.34 22 A A O H ILE ALA 44 47 1.58 23 A A O H ALA VAL 21 25 1.50 23 A A O H ARG LYS 29 33 1.59 26 A A O H LYS ASN 24 28 1.51 26 A A O H VAL ARG 25 29 1.55 27 A A O H LEU GLY 31 35 1.60 30 A A O H LYS ILE 2 4 1.57 1 A ALA 3 -160.86 -37.85 1 A SER 19 -157.86 -49.26 1 A ALA 63 -69.24 12.33 2 A VAL 6 -148.47 -13.72 2 A HIS 11 -62.92 97.22 2 A ASN 18 -163.70 -52.77 2 A VAL 36 -88.80 30.72 2 A ASP 38 -0.61 -98.44 3 A ILE 4 -110.01 -97.59 3 A LEU 7 -159.98 -41.41 3 A ALA 14 -69.20 -152.18 4 A HIS 11 -140.04 10.32 4 A GLU 13 -168.51 -50.08 5 A LEU 7 -168.45 -12.20 5 A HIS 11 -41.89 91.45 5 A ASP 16 -174.85 -166.45 5 A ALA 17 -158.36 -108.56 6 A ALA 3 -168.46 15.56 6 A LEU 7 -154.52 -47.91 6 A ASN 46 -97.46 49.14 7 A VAL 6 -50.25 -9.85 7 A ALA 17 -171.88 -14.18 9 A ALA 3 -164.78 -6.36 9 A PHE 5 -60.00 -119.80 9 A LEU 7 -169.37 -44.26 9 A ALA 14 -161.40 -11.57 9 A ALA 17 -175.45 -35.73 9 A ALA 47 -47.93 92.49 10 A VAL 6 -166.48 36.42 10 A ASN 8 -69.65 64.50 10 A ALA 17 -159.96 -80.88 10 A VAL 36 -69.43 -177.97 11 A ALA 3 -164.04 -35.83 11 A ASP 12 -153.39 -121.22 11 A ASP 16 -154.35 84.54 12 A PHE 5 -64.51 72.15 12 A ALA 9 -172.48 42.57 12 A ASP 12 -173.58 19.15 12 A ALA 14 -166.38 -142.17 12 A VAL 36 -57.07 -167.33 13 A PHE 5 -151.87 -38.47 13 A VAL 6 -162.13 86.18 13 A ASN 8 -160.80 -26.58 13 A ASP 12 -69.67 42.94 13 A ASP 38 -167.78 -107.77 14 A ALA 3 -45.21 -70.50 14 A ALA 9 -161.61 -130.33 14 A ALA 14 -168.53 -5.56 14 A ASP 38 -165.33 -100.12 15 A ALA 3 -39.89 159.97 15 A VAL 6 -67.17 -147.49 16 A LEU 7 -67.12 72.33 16 A ALA 17 -55.38 -5.85 17 A ALA 3 -170.13 112.85 17 A ILE 4 -168.12 -32.39 17 A ASP 12 -170.14 -117.76 17 A ASP 16 -56.92 -118.53 17 A ALA 17 -173.59 -101.49 17 A VAL 36 -66.13 -173.50 18 A ASP 12 -171.05 118.20 18 A GLU 13 -140.64 -80.03 19 A ALA 3 -150.69 16.10 19 A PHE 5 -47.28 155.06 19 A HIS 11 -144.04 -101.69 19 A ALA 17 -149.73 -34.12 20 A ASN 8 -96.72 -121.13 20 A ALA 14 -153.06 21.74 20 A ASN 18 -89.93 -79.88 21 A ALA 14 -157.11 -129.59 22 A ASN 8 -153.92 2.06 22 A ALA 9 -90.67 -80.02 22 A ALA 14 -140.69 -58.72 22 A ASN 18 -90.01 -79.95 23 A ALA 3 -156.48 -52.83 23 A ALA 9 -90.90 -104.24 23 A ASP 16 -137.15 -138.03 23 A ALA 17 -38.40 -29.93 24 A ASN 18 -134.54 -43.74 24 A ALA 63 -147.58 -25.89 25 A VAL 6 -95.96 -154.13 25 A ASN 8 -69.94 20.78 25 A ALA 14 -78.60 -160.02 26 A ILE 4 -170.00 -24.82 26 A ALA 9 -61.01 98.75 26 A ASP 12 -115.80 -120.05 26 A VAL 36 -54.73 170.10 27 A LEU 7 -151.02 -33.11 27 A GLU 13 -146.50 10.31 27 A VAL 36 -68.41 -169.21 27 A LEU 56 -84.50 -70.52 28 A ALA 3 -175.35 101.78 28 A PHE 5 -172.41 -11.60 28 A ALA 17 -173.20 -75.51 28 A VAL 36 -63.33 -171.70 29 A ILE 4 -137.07 -141.23 29 A ALA 9 -164.25 14.11 29 A ASN 18 -159.90 -51.66 29 A SER 37 -45.02 -97.92 29 A ASP 38 -171.49 -47.02 30 A ALA 3 -67.83 60.80 30 A LEU 7 -72.68 -108.04 30 A ASN 8 -101.07 59.90 30 A GLN 10 -85.64 41.83 IMMUNOGLOBULIN G BINDING PROTEIN G Solution structure of the Albumin binding domain of Streptococcal Protein G 1 N N A SER 19 A SER 19 HELX_P A TYR 34 A TYR 34 1 1 16 A ASP 38 A ASP 38 HELX_P A ASN 45 A ASN 45 1 2 8 A VAL 50 A VAL 50 HELX_P A ALA 63 A ALA 63 1 3 14 IMMUNOGLOBULIN-BINDING PROTEIN IMMUNOGLOBULIN-BINDING PROTEIN, BACTERIAL SURFACE PROTEIN, ALBUMIN BINDING, PROTEIN G 1GJS PDB 1 1GJS SPG2_STRSP UNP 1 P19909 1 19 1GJS 1 19 1GJS A 1 1 19 254 299 1GJS 20 65 P19909 A 2 20 65 1 P 1