1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Horst, R. Damberger, F. Guntert, P. Luginbuhl, P. Nikonova, L. Peng, G. Leal, W.S. Wuthrich, K. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 98 14374 14379 10.1073/PNAS.251532998 11724947 NMR Structure Reveals Novel Intramolecular Regulation Mechanism for Pheromone-Binding and Release 2001 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 15903.138 PHEROMONE-BINDING PROTEIN 1 man polymer no no SQEVMKNLSLNFGKALDECKKEMTLTDAINEDFYNFWKEGYEIKNRETGCAIMCLSTKLNMLDPEGNLHHGNAMEFAKKH GADETMAQQLIDIVHGCEKSTPANDDKCIWTLGVATCFKAEIHKLNWAPSMDVAVGEILAEV SQEVMKNLSLNFGKALDECKKEMTLTDAINEDFYNFWKEGYEIKNRETGCAIMCLSTKLNMLDPEGNLHHGNAMEFAKKH GADETMAQQLIDIVHGCEKSTPANDDKCIWTLGVATCFKAEIHKLNWAPSMDVAVGEILAEV A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n SILKWORM MOTH sample 7091 BOMBYX MORI 562 ESCHERICHIA COLI citation struct repository Initial release Version format compliance Version format compliance Database references Structure summary 1 0 2001-11-30 1 1 2011-05-08 1 2 2011-07-13 1 3 2018-01-17 _citation.page_last _struct.title BOMBYX MORI PHEROMONE BINDING PROTEIN PDBE Y PDBE 2001-09-05 REL 20 NOESY 4.5 pH 293 K 1 LUGINBUHL,GUNTERT,BILLETER,WUTHRICH refinement OPAL structure solution C structure solution ID/DYANA 750 Bruker DRX SER 1 n 1 SER 1 A GLN 2 n 2 GLN 2 A GLU 3 n 3 GLU 3 A VAL 4 n 4 VAL 4 A MET 5 n 5 MET 5 A LYS 6 n 6 LYS 6 A ASN 7 n 7 ASN 7 A LEU 8 n 8 LEU 8 A SER 9 n 9 SER 9 A LEU 10 n 10 LEU 10 A ASN 11 n 11 ASN 11 A PHE 12 n 12 PHE 12 A GLY 13 n 13 GLY 13 A LYS 14 n 14 LYS 14 A ALA 15 n 15 ALA 15 A LEU 16 n 16 LEU 16 A ASP 17 n 17 ASP 17 A GLU 18 n 18 GLU 18 A CYS 19 n 19 CYS 19 A LYS 20 n 20 LYS 20 A LYS 21 n 21 LYS 21 A GLU 22 n 22 GLU 22 A MET 23 n 23 MET 23 A THR 24 n 24 THR 24 A LEU 25 n 25 LEU 25 A THR 26 n 26 THR 26 A ASP 27 n 27 ASP 27 A ALA 28 n 28 ALA 28 A ILE 29 n 29 ILE 29 A ASN 30 n 30 ASN 30 A GLU 31 n 31 GLU 31 A ASP 32 n 32 ASP 32 A PHE 33 n 33 PHE 33 A TYR 34 n 34 TYR 34 A ASN 35 n 35 ASN 35 A PHE 36 n 36 PHE 36 A TRP 37 n 37 TRP 37 A LYS 38 n 38 LYS 38 A GLU 39 n 39 GLU 39 A GLY 40 n 40 GLY 40 A TYR 41 n 41 TYR 41 A GLU 42 n 42 GLU 42 A ILE 43 n 43 ILE 43 A LYS 44 n 44 LYS 44 A ASN 45 n 45 ASN 45 A ARG 46 n 46 ARG 46 A GLU 47 n 47 GLU 47 A THR 48 n 48 THR 48 A GLY 49 n 49 GLY 49 A CYS 50 n 50 CYS 50 A ALA 51 n 51 ALA 51 A ILE 52 n 52 ILE 52 A MET 53 n 53 MET 53 A CYS 54 n 54 CYS 54 A LEU 55 n 55 LEU 55 A SER 56 n 56 SER 56 A THR 57 n 57 THR 57 A LYS 58 n 58 LYS 58 A LEU 59 n 59 LEU 59 A ASN 60 n 60 ASN 60 A MET 61 n 61 MET 61 A LEU 62 n 62 LEU 62 A ASP 63 n 63 ASP 63 A PRO 64 n 64 PRO 64 A GLU 65 n 65 GLU 65 A GLY 66 n 66 GLY 66 A ASN 67 n 67 ASN 67 A LEU 68 n 68 LEU 68 A HIS 69 n 69 HIS 69 A HIS 70 n 70 HIS 70 A GLY 71 n 71 GLY 71 A ASN 72 n 72 ASN 72 A ALA 73 n 73 ALA 73 A MET 74 n 74 MET 74 A GLU 75 n 75 GLU 75 A PHE 76 n 76 PHE 76 A ALA 77 n 77 ALA 77 A LYS 78 n 78 LYS 78 A LYS 79 n 79 LYS 79 A HIS 80 n 80 HIS 80 A GLY 81 n 81 GLY 81 A ALA 82 n 82 ALA 82 A ASP 83 n 83 ASP 83 A GLU 84 n 84 GLU 84 A THR 85 n 85 THR 85 A MET 86 n 86 MET 86 A ALA 87 n 87 ALA 87 A GLN 88 n 88 GLN 88 A GLN 89 n 89 GLN 89 A LEU 90 n 90 LEU 90 A ILE 91 n 91 ILE 91 A ASP 92 n 92 ASP 92 A ILE 93 n 93 ILE 93 A VAL 94 n 94 VAL 94 A HIS 95 n 95 HIS 95 A GLY 96 n 96 GLY 96 A CYS 97 n 97 CYS 97 A GLU 98 n 98 GLU 98 A LYS 99 n 99 LYS 99 A SER 100 n 100 SER 100 A THR 101 n 101 THR 101 A PRO 102 n 102 PRO 102 A ALA 103 n 103 ALA 103 A ASN 104 n 104 ASN 104 A ASP 105 n 105 ASP 105 A ASP 106 n 106 ASP 106 A LYS 107 n 107 LYS 107 A CYS 108 n 108 CYS 108 A ILE 109 n 109 ILE 109 A TRP 110 n 110 TRP 110 A THR 111 n 111 THR 111 A LEU 112 n 112 LEU 112 A GLY 113 n 113 GLY 113 A VAL 114 n 114 VAL 114 A ALA 115 n 115 ALA 115 A THR 116 n 116 THR 116 A CYS 117 n 117 CYS 117 A PHE 118 n 118 PHE 118 A LYS 119 n 119 LYS 119 A ALA 120 n 120 ALA 120 A GLU 121 n 121 GLU 121 A ILE 122 n 122 ILE 122 A HIS 123 n 123 HIS 123 A LYS 124 n 124 LYS 124 A LEU 125 n 125 LEU 125 A ASN 126 n 126 ASN 126 A TRP 127 n 127 TRP 127 A ALA 128 n 128 ALA 128 A PRO 129 n 129 PRO 129 A SER 130 n 130 SER 130 A MET 131 n 131 MET 131 A ASP 132 n 132 ASP 132 A VAL 133 n 133 VAL 133 A ALA 134 n 134 ALA 134 A VAL 135 n 135 VAL 135 A GLY 136 n 136 GLY 136 A GLU 137 n 137 GLU 137 A ILE 138 n 138 ILE 138 A LEU 139 n 139 LEU 139 A ALA 140 n 140 ALA 140 A GLU 141 n 141 GLU 141 A VAL 142 n 142 VAL 142 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 15 A A HG O SER VAL 56 142 1.55 9 A A MET THR 23 24 -148.18 17 A A SER GLN 1 2 -136.12 2 A TYR 34 0.072 SIDE CHAIN 2 A TYR 41 0.106 SIDE CHAIN 2 A ARG 46 0.100 SIDE CHAIN 3 A TYR 41 0.064 SIDE CHAIN 7 A TYR 41 0.120 SIDE CHAIN 8 A TYR 34 0.085 SIDE CHAIN 8 A TYR 41 0.086 SIDE CHAIN 11 A TYR 41 0.079 SIDE CHAIN 11 A ARG 46 0.096 SIDE CHAIN 13 A TYR 41 0.127 SIDE CHAIN 15 A TYR 41 0.066 SIDE CHAIN 17 A TYR 41 0.092 SIDE CHAIN 17 A ARG 46 0.099 SIDE CHAIN 18 A ARG 46 0.084 SIDE CHAIN 18 A ASP 132 0.097 SIDE CHAIN 7 8.52 1.10 114.20 122.72 A A A CA CB SG CYS CYS CYS 108 108 108 N 8 7.41 1.10 114.20 121.61 A A A CA CB SG CYS CYS CYS 50 50 50 N 9 -3.79 0.60 121.00 117.21 A A A CB CG CD2 TYR TYR TYR 41 41 41 N 11 7.83 1.10 114.20 122.03 A A A CA CB SG CYS CYS CYS 50 50 50 N 12 -3.86 0.60 121.00 117.14 A A A CB CG CD2 TYR TYR TYR 41 41 41 N 12 6.80 1.10 114.20 121.00 A A A CA CB SG CYS CYS CYS 50 50 50 N 13 6.79 1.10 114.20 120.99 A A A CA CB SG CYS CYS CYS 50 50 50 N 14 7.92 1.10 114.20 122.12 A A A CA CB SG CYS CYS CYS 50 50 50 N 15 7.64 1.10 114.20 121.84 A A A CA CB SG CYS CYS CYS 50 50 50 N 15 -5.45 0.90 118.30 112.85 A A A CB CG OD2 ASP ASP ASP 63 63 63 N 16 6.65 1.10 114.20 120.85 A A A CA CB SG CYS CYS CYS 108 108 108 N 18 8.03 1.10 114.20 122.23 A A A CA CB SG CYS CYS CYS 108 108 108 N 1 A LEU 8 53.50 97.34 1 A ILE 29 -39.30 -35.82 1 A ILE 43 -100.36 76.21 1 A LYS 44 -108.97 55.36 1 A ALA 103 -61.01 97.02 2 A MET 5 -145.22 37.14 2 A LEU 8 50.92 111.10 2 A LEU 10 -65.59 -179.53 2 A LEU 25 -55.11 173.47 2 A LEU 68 -67.06 88.18 2 A ASN 72 -151.51 79.79 2 A ALA 103 -62.50 91.95 2 A VAL 133 -64.29 -71.77 3 A MET 5 -141.93 12.05 3 A LYS 6 -75.61 -164.44 3 A LEU 8 51.16 98.42 3 A ASN 11 -106.19 60.94 3 A ASN 72 -152.91 82.40 3 A ALA 103 -65.65 93.72 3 A VAL 133 -61.97 -76.09 4 A GLU 3 -96.63 41.03 4 A LYS 6 -64.43 -176.59 4 A LEU 25 -59.96 172.67 4 A ASN 72 -150.71 52.53 4 A ASP 83 -66.00 -179.53 4 A ALA 103 -68.60 90.54 4 A ALA 140 -58.31 -9.96 5 A VAL 4 -104.98 66.44 5 A LYS 6 -66.83 -172.49 5 A LEU 8 -38.68 123.43 5 A ASN 45 -75.79 -169.91 5 A ASN 72 -150.93 36.04 5 A ALA 103 -54.77 93.99 6 A VAL 4 -118.16 52.98 6 A LYS 6 -55.07 173.28 6 A LEU 8 54.80 98.16 6 A ASN 11 -104.88 59.63 6 A THR 24 37.56 58.74 6 A GLU 42 -76.04 44.54 6 A ALA 103 -51.83 96.49 6 A VAL 133 -61.90 -72.16 6 A ILE 138 -59.96 -6.18 7 A GLU 3 -146.48 46.87 7 A LEU 8 56.19 113.97 7 A ASN 72 -159.81 81.96 7 A ALA 103 -66.83 91.34 7 A VAL 133 -58.09 -70.50 7 A GLU 141 -125.28 -64.14 8 A LEU 8 51.41 105.19 8 A LEU 25 -56.74 173.86 8 A ASN 45 -75.78 -168.01 8 A LEU 68 -64.69 94.12 9 A VAL 4 39.53 71.06 9 A LYS 6 -75.74 -166.20 9 A ASN 7 -47.87 162.12 9 A LEU 8 41.95 94.41 9 A LEU 10 -64.88 -171.66 9 A THR 24 36.97 72.69 10 A LEU 8 55.38 116.19 10 A THR 24 37.56 69.34 10 A ASP 83 -69.56 -178.46 10 A ALA 103 -68.26 82.35 11 A MET 5 -142.75 38.69 11 A LYS 6 -64.79 -164.62 11 A ASN 7 -41.19 164.62 11 A LEU 8 25.00 99.06 11 A LEU 25 -56.50 173.34 11 A ASN 72 -155.26 44.69 11 A ALA 103 -68.34 92.80 11 A GLU 141 -123.54 -57.76 12 A GLU 3 -142.84 47.89 12 A LEU 8 56.23 104.34 12 A ASN 11 -112.90 65.46 12 A ASN 72 -151.69 78.70 12 A ASP 83 -105.16 -165.25 13 A GLU 3 -104.44 49.24 13 A LEU 8 58.78 100.92 13 A LEU 25 -53.26 174.43 13 A ASP 63 -46.52 92.70 13 A ASP 83 -65.38 -179.23 13 A ALA 140 -59.73 -7.60 14 A LEU 8 45.33 92.22 14 A LEU 25 -79.79 -169.84 14 A ALA 103 -65.70 94.16 15 A MET 5 -140.15 31.20 15 A LYS 6 -69.13 -179.02 15 A ASN 11 -74.73 49.72 15 A THR 24 57.48 71.98 15 A ASN 60 -59.03 -9.26 15 A ALA 103 -59.01 99.79 16 A GLN 2 49.61 -166.42 16 A MET 5 -141.80 15.21 16 A ASN 45 -70.13 -154.66 16 A ASN 72 -155.52 60.77 16 A ALA 103 -48.57 95.07 16 A ASP 105 -37.73 -35.68 17 A GLN 2 62.59 171.57 17 A VAL 4 35.87 57.05 17 A LYS 6 -60.41 -165.26 17 A ASN 7 -49.24 162.55 17 A LEU 8 54.01 101.01 17 A LEU 10 -57.48 176.78 17 A ASN 11 -114.98 70.79 17 A THR 24 29.54 69.26 17 A ILE 29 -132.67 -37.31 17 A LYS 44 -118.09 55.02 17 A ALA 103 -67.00 89.93 18 A LYS 6 -65.79 -176.51 18 A ASN 7 -47.81 152.24 18 A LEU 8 53.98 109.82 18 A ASN 11 -103.45 64.67 18 A ASN 45 -72.08 -154.79 18 A ASN 72 -151.02 78.69 18 A ALA 103 -52.00 98.78 18 A ALA 140 -57.87 -7.14 18 A GLU 141 -124.48 -60.14 19 A LEU 25 -59.54 172.99 19 A ALA 28 -72.17 28.88 19 A TYR 41 -52.16 105.02 19 A ALA 103 -49.42 100.92 19 A ALA 140 -54.64 -9.40 20 A VAL 4 -84.83 34.54 20 A LEU 8 50.00 100.38 20 A LEU 25 -56.77 173.39 20 A ASN 72 -146.80 40.83 20 A ALA 140 -58.96 -6.53 PHEROMONE-BINDING PROTEIN A Form of the Pheromone-Binding Protein from Bombyx mori 1 N N A ASN 11 A ASN 11 HELX_P A MET 23 A MET 23 1 1 13 A ALA 28 A ALA 28 HELX_P A PHE 36 A PHE 36 1 2 9 A ASN 45 A ASN 45 HELX_P A SER 56 A SER 56 1 3 12 A LYS 58 A LYS 58 HELX_P A ASP 63 A ASP 63 1 4 6 A ALA 73 A ALA 73 HELX_P A HIS 80 A HIS 80 1 5 8 A ASP 83 A ASP 83 HELX_P A THR 101 A THR 101 1 6 19 A ASP 106 A ASP 106 HELX_P A HIS 123 A HIS 123 1 7 18 A SER 130 A SER 130 HELX_P A VAL 142 A VAL 142 1 8 13 disulf 2.032 A CYS 19 A SG CYS 19 1_555 A CYS 54 A SG CYS 54 1_555 disulf 2.034 A CYS 50 A SG CYS 50 1_555 A CYS 108 A SG CYS 108 1_555 disulf 2.036 A CYS 97 A SG CYS 97 1_555 A CYS 117 A SG CYS 117 1_555 TRANSPORT PROTEIN TRANSPORT PROTEIN, INSECT ODORANT-BINDING PROTEIN, PH-DEPENDENT CONFORMATION, HELICAL INSERTION PBP_BOMMO UNP 1 P34174 23 164 1GM0 1 142 P34174 A 1 1 142 1 P 1