1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Horst, R.
Damberger, F.
Guntert, P.
Luginbuhl, P.
Nikonova, L.
Peng, G.
Leal, W.S.
Wuthrich, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
98
14374
14379
10.1073/PNAS.251532998
11724947
NMR Structure Reveals Novel Intramolecular Regulation Mechanism for Pheromone-Binding and Release
2001
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
15903.138
PHEROMONE-BINDING PROTEIN
1
man
polymer
no
no
SQEVMKNLSLNFGKALDECKKEMTLTDAINEDFYNFWKEGYEIKNRETGCAIMCLSTKLNMLDPEGNLHHGNAMEFAKKH
GADETMAQQLIDIVHGCEKSTPANDDKCIWTLGVATCFKAEIHKLNWAPSMDVAVGEILAEV
SQEVMKNLSLNFGKALDECKKEMTLTDAINEDFYNFWKEGYEIKNRETGCAIMCLSTKLNMLDPEGNLHHGNAMEFAKKH
GADETMAQQLIDIVHGCEKSTPANDDKCIWTLGVATCFKAEIHKLNWAPSMDVAVGEILAEV
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
SILKWORM MOTH
sample
7091
BOMBYX MORI
562
ESCHERICHIA COLI
citation
struct
repository
Initial release
Version format compliance
Version format compliance
Database references
Structure summary
1
0
2001-11-30
1
1
2011-05-08
1
2
2011-07-13
1
3
2018-01-17
_citation.page_last
_struct.title
BOMBYX MORI PHEROMONE BINDING PROTEIN
PDBE
Y
PDBE
2001-09-05
REL
20
NOESY
4.5
pH
293
K
1
LUGINBUHL,GUNTERT,BILLETER,WUTHRICH
refinement
OPAL
structure solution
C
structure solution
ID/DYANA
750
Bruker
DRX
SER
1
n
1
SER
1
A
GLN
2
n
2
GLN
2
A
GLU
3
n
3
GLU
3
A
VAL
4
n
4
VAL
4
A
MET
5
n
5
MET
5
A
LYS
6
n
6
LYS
6
A
ASN
7
n
7
ASN
7
A
LEU
8
n
8
LEU
8
A
SER
9
n
9
SER
9
A
LEU
10
n
10
LEU
10
A
ASN
11
n
11
ASN
11
A
PHE
12
n
12
PHE
12
A
GLY
13
n
13
GLY
13
A
LYS
14
n
14
LYS
14
A
ALA
15
n
15
ALA
15
A
LEU
16
n
16
LEU
16
A
ASP
17
n
17
ASP
17
A
GLU
18
n
18
GLU
18
A
CYS
19
n
19
CYS
19
A
LYS
20
n
20
LYS
20
A
LYS
21
n
21
LYS
21
A
GLU
22
n
22
GLU
22
A
MET
23
n
23
MET
23
A
THR
24
n
24
THR
24
A
LEU
25
n
25
LEU
25
A
THR
26
n
26
THR
26
A
ASP
27
n
27
ASP
27
A
ALA
28
n
28
ALA
28
A
ILE
29
n
29
ILE
29
A
ASN
30
n
30
ASN
30
A
GLU
31
n
31
GLU
31
A
ASP
32
n
32
ASP
32
A
PHE
33
n
33
PHE
33
A
TYR
34
n
34
TYR
34
A
ASN
35
n
35
ASN
35
A
PHE
36
n
36
PHE
36
A
TRP
37
n
37
TRP
37
A
LYS
38
n
38
LYS
38
A
GLU
39
n
39
GLU
39
A
GLY
40
n
40
GLY
40
A
TYR
41
n
41
TYR
41
A
GLU
42
n
42
GLU
42
A
ILE
43
n
43
ILE
43
A
LYS
44
n
44
LYS
44
A
ASN
45
n
45
ASN
45
A
ARG
46
n
46
ARG
46
A
GLU
47
n
47
GLU
47
A
THR
48
n
48
THR
48
A
GLY
49
n
49
GLY
49
A
CYS
50
n
50
CYS
50
A
ALA
51
n
51
ALA
51
A
ILE
52
n
52
ILE
52
A
MET
53
n
53
MET
53
A
CYS
54
n
54
CYS
54
A
LEU
55
n
55
LEU
55
A
SER
56
n
56
SER
56
A
THR
57
n
57
THR
57
A
LYS
58
n
58
LYS
58
A
LEU
59
n
59
LEU
59
A
ASN
60
n
60
ASN
60
A
MET
61
n
61
MET
61
A
LEU
62
n
62
LEU
62
A
ASP
63
n
63
ASP
63
A
PRO
64
n
64
PRO
64
A
GLU
65
n
65
GLU
65
A
GLY
66
n
66
GLY
66
A
ASN
67
n
67
ASN
67
A
LEU
68
n
68
LEU
68
A
HIS
69
n
69
HIS
69
A
HIS
70
n
70
HIS
70
A
GLY
71
n
71
GLY
71
A
ASN
72
n
72
ASN
72
A
ALA
73
n
73
ALA
73
A
MET
74
n
74
MET
74
A
GLU
75
n
75
GLU
75
A
PHE
76
n
76
PHE
76
A
ALA
77
n
77
ALA
77
A
LYS
78
n
78
LYS
78
A
LYS
79
n
79
LYS
79
A
HIS
80
n
80
HIS
80
A
GLY
81
n
81
GLY
81
A
ALA
82
n
82
ALA
82
A
ASP
83
n
83
ASP
83
A
GLU
84
n
84
GLU
84
A
THR
85
n
85
THR
85
A
MET
86
n
86
MET
86
A
ALA
87
n
87
ALA
87
A
GLN
88
n
88
GLN
88
A
GLN
89
n
89
GLN
89
A
LEU
90
n
90
LEU
90
A
ILE
91
n
91
ILE
91
A
ASP
92
n
92
ASP
92
A
ILE
93
n
93
ILE
93
A
VAL
94
n
94
VAL
94
A
HIS
95
n
95
HIS
95
A
GLY
96
n
96
GLY
96
A
CYS
97
n
97
CYS
97
A
GLU
98
n
98
GLU
98
A
LYS
99
n
99
LYS
99
A
SER
100
n
100
SER
100
A
THR
101
n
101
THR
101
A
PRO
102
n
102
PRO
102
A
ALA
103
n
103
ALA
103
A
ASN
104
n
104
ASN
104
A
ASP
105
n
105
ASP
105
A
ASP
106
n
106
ASP
106
A
LYS
107
n
107
LYS
107
A
CYS
108
n
108
CYS
108
A
ILE
109
n
109
ILE
109
A
TRP
110
n
110
TRP
110
A
THR
111
n
111
THR
111
A
LEU
112
n
112
LEU
112
A
GLY
113
n
113
GLY
113
A
VAL
114
n
114
VAL
114
A
ALA
115
n
115
ALA
115
A
THR
116
n
116
THR
116
A
CYS
117
n
117
CYS
117
A
PHE
118
n
118
PHE
118
A
LYS
119
n
119
LYS
119
A
ALA
120
n
120
ALA
120
A
GLU
121
n
121
GLU
121
A
ILE
122
n
122
ILE
122
A
HIS
123
n
123
HIS
123
A
LYS
124
n
124
LYS
124
A
LEU
125
n
125
LEU
125
A
ASN
126
n
126
ASN
126
A
TRP
127
n
127
TRP
127
A
ALA
128
n
128
ALA
128
A
PRO
129
n
129
PRO
129
A
SER
130
n
130
SER
130
A
MET
131
n
131
MET
131
A
ASP
132
n
132
ASP
132
A
VAL
133
n
133
VAL
133
A
ALA
134
n
134
ALA
134
A
VAL
135
n
135
VAL
135
A
GLY
136
n
136
GLY
136
A
GLU
137
n
137
GLU
137
A
ILE
138
n
138
ILE
138
A
LEU
139
n
139
LEU
139
A
ALA
140
n
140
ALA
140
A
GLU
141
n
141
GLU
141
A
VAL
142
n
142
VAL
142
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
15
A
A
HG
O
SER
VAL
56
142
1.55
9
A
A
MET
THR
23
24
-148.18
17
A
A
SER
GLN
1
2
-136.12
2
A
TYR
34
0.072
SIDE CHAIN
2
A
TYR
41
0.106
SIDE CHAIN
2
A
ARG
46
0.100
SIDE CHAIN
3
A
TYR
41
0.064
SIDE CHAIN
7
A
TYR
41
0.120
SIDE CHAIN
8
A
TYR
34
0.085
SIDE CHAIN
8
A
TYR
41
0.086
SIDE CHAIN
11
A
TYR
41
0.079
SIDE CHAIN
11
A
ARG
46
0.096
SIDE CHAIN
13
A
TYR
41
0.127
SIDE CHAIN
15
A
TYR
41
0.066
SIDE CHAIN
17
A
TYR
41
0.092
SIDE CHAIN
17
A
ARG
46
0.099
SIDE CHAIN
18
A
ARG
46
0.084
SIDE CHAIN
18
A
ASP
132
0.097
SIDE CHAIN
7
8.52
1.10
114.20
122.72
A
A
A
CA
CB
SG
CYS
CYS
CYS
108
108
108
N
8
7.41
1.10
114.20
121.61
A
A
A
CA
CB
SG
CYS
CYS
CYS
50
50
50
N
9
-3.79
0.60
121.00
117.21
A
A
A
CB
CG
CD2
TYR
TYR
TYR
41
41
41
N
11
7.83
1.10
114.20
122.03
A
A
A
CA
CB
SG
CYS
CYS
CYS
50
50
50
N
12
-3.86
0.60
121.00
117.14
A
A
A
CB
CG
CD2
TYR
TYR
TYR
41
41
41
N
12
6.80
1.10
114.20
121.00
A
A
A
CA
CB
SG
CYS
CYS
CYS
50
50
50
N
13
6.79
1.10
114.20
120.99
A
A
A
CA
CB
SG
CYS
CYS
CYS
50
50
50
N
14
7.92
1.10
114.20
122.12
A
A
A
CA
CB
SG
CYS
CYS
CYS
50
50
50
N
15
7.64
1.10
114.20
121.84
A
A
A
CA
CB
SG
CYS
CYS
CYS
50
50
50
N
15
-5.45
0.90
118.30
112.85
A
A
A
CB
CG
OD2
ASP
ASP
ASP
63
63
63
N
16
6.65
1.10
114.20
120.85
A
A
A
CA
CB
SG
CYS
CYS
CYS
108
108
108
N
18
8.03
1.10
114.20
122.23
A
A
A
CA
CB
SG
CYS
CYS
CYS
108
108
108
N
1
A
LEU
8
53.50
97.34
1
A
ILE
29
-39.30
-35.82
1
A
ILE
43
-100.36
76.21
1
A
LYS
44
-108.97
55.36
1
A
ALA
103
-61.01
97.02
2
A
MET
5
-145.22
37.14
2
A
LEU
8
50.92
111.10
2
A
LEU
10
-65.59
-179.53
2
A
LEU
25
-55.11
173.47
2
A
LEU
68
-67.06
88.18
2
A
ASN
72
-151.51
79.79
2
A
ALA
103
-62.50
91.95
2
A
VAL
133
-64.29
-71.77
3
A
MET
5
-141.93
12.05
3
A
LYS
6
-75.61
-164.44
3
A
LEU
8
51.16
98.42
3
A
ASN
11
-106.19
60.94
3
A
ASN
72
-152.91
82.40
3
A
ALA
103
-65.65
93.72
3
A
VAL
133
-61.97
-76.09
4
A
GLU
3
-96.63
41.03
4
A
LYS
6
-64.43
-176.59
4
A
LEU
25
-59.96
172.67
4
A
ASN
72
-150.71
52.53
4
A
ASP
83
-66.00
-179.53
4
A
ALA
103
-68.60
90.54
4
A
ALA
140
-58.31
-9.96
5
A
VAL
4
-104.98
66.44
5
A
LYS
6
-66.83
-172.49
5
A
LEU
8
-38.68
123.43
5
A
ASN
45
-75.79
-169.91
5
A
ASN
72
-150.93
36.04
5
A
ALA
103
-54.77
93.99
6
A
VAL
4
-118.16
52.98
6
A
LYS
6
-55.07
173.28
6
A
LEU
8
54.80
98.16
6
A
ASN
11
-104.88
59.63
6
A
THR
24
37.56
58.74
6
A
GLU
42
-76.04
44.54
6
A
ALA
103
-51.83
96.49
6
A
VAL
133
-61.90
-72.16
6
A
ILE
138
-59.96
-6.18
7
A
GLU
3
-146.48
46.87
7
A
LEU
8
56.19
113.97
7
A
ASN
72
-159.81
81.96
7
A
ALA
103
-66.83
91.34
7
A
VAL
133
-58.09
-70.50
7
A
GLU
141
-125.28
-64.14
8
A
LEU
8
51.41
105.19
8
A
LEU
25
-56.74
173.86
8
A
ASN
45
-75.78
-168.01
8
A
LEU
68
-64.69
94.12
9
A
VAL
4
39.53
71.06
9
A
LYS
6
-75.74
-166.20
9
A
ASN
7
-47.87
162.12
9
A
LEU
8
41.95
94.41
9
A
LEU
10
-64.88
-171.66
9
A
THR
24
36.97
72.69
10
A
LEU
8
55.38
116.19
10
A
THR
24
37.56
69.34
10
A
ASP
83
-69.56
-178.46
10
A
ALA
103
-68.26
82.35
11
A
MET
5
-142.75
38.69
11
A
LYS
6
-64.79
-164.62
11
A
ASN
7
-41.19
164.62
11
A
LEU
8
25.00
99.06
11
A
LEU
25
-56.50
173.34
11
A
ASN
72
-155.26
44.69
11
A
ALA
103
-68.34
92.80
11
A
GLU
141
-123.54
-57.76
12
A
GLU
3
-142.84
47.89
12
A
LEU
8
56.23
104.34
12
A
ASN
11
-112.90
65.46
12
A
ASN
72
-151.69
78.70
12
A
ASP
83
-105.16
-165.25
13
A
GLU
3
-104.44
49.24
13
A
LEU
8
58.78
100.92
13
A
LEU
25
-53.26
174.43
13
A
ASP
63
-46.52
92.70
13
A
ASP
83
-65.38
-179.23
13
A
ALA
140
-59.73
-7.60
14
A
LEU
8
45.33
92.22
14
A
LEU
25
-79.79
-169.84
14
A
ALA
103
-65.70
94.16
15
A
MET
5
-140.15
31.20
15
A
LYS
6
-69.13
-179.02
15
A
ASN
11
-74.73
49.72
15
A
THR
24
57.48
71.98
15
A
ASN
60
-59.03
-9.26
15
A
ALA
103
-59.01
99.79
16
A
GLN
2
49.61
-166.42
16
A
MET
5
-141.80
15.21
16
A
ASN
45
-70.13
-154.66
16
A
ASN
72
-155.52
60.77
16
A
ALA
103
-48.57
95.07
16
A
ASP
105
-37.73
-35.68
17
A
GLN
2
62.59
171.57
17
A
VAL
4
35.87
57.05
17
A
LYS
6
-60.41
-165.26
17
A
ASN
7
-49.24
162.55
17
A
LEU
8
54.01
101.01
17
A
LEU
10
-57.48
176.78
17
A
ASN
11
-114.98
70.79
17
A
THR
24
29.54
69.26
17
A
ILE
29
-132.67
-37.31
17
A
LYS
44
-118.09
55.02
17
A
ALA
103
-67.00
89.93
18
A
LYS
6
-65.79
-176.51
18
A
ASN
7
-47.81
152.24
18
A
LEU
8
53.98
109.82
18
A
ASN
11
-103.45
64.67
18
A
ASN
45
-72.08
-154.79
18
A
ASN
72
-151.02
78.69
18
A
ALA
103
-52.00
98.78
18
A
ALA
140
-57.87
-7.14
18
A
GLU
141
-124.48
-60.14
19
A
LEU
25
-59.54
172.99
19
A
ALA
28
-72.17
28.88
19
A
TYR
41
-52.16
105.02
19
A
ALA
103
-49.42
100.92
19
A
ALA
140
-54.64
-9.40
20
A
VAL
4
-84.83
34.54
20
A
LEU
8
50.00
100.38
20
A
LEU
25
-56.77
173.39
20
A
ASN
72
-146.80
40.83
20
A
ALA
140
-58.96
-6.53
PHEROMONE-BINDING PROTEIN
A Form of the Pheromone-Binding Protein from Bombyx mori
1
N
N
A
ASN
11
A
ASN
11
HELX_P
A
MET
23
A
MET
23
1
1
13
A
ALA
28
A
ALA
28
HELX_P
A
PHE
36
A
PHE
36
1
2
9
A
ASN
45
A
ASN
45
HELX_P
A
SER
56
A
SER
56
1
3
12
A
LYS
58
A
LYS
58
HELX_P
A
ASP
63
A
ASP
63
1
4
6
A
ALA
73
A
ALA
73
HELX_P
A
HIS
80
A
HIS
80
1
5
8
A
ASP
83
A
ASP
83
HELX_P
A
THR
101
A
THR
101
1
6
19
A
ASP
106
A
ASP
106
HELX_P
A
HIS
123
A
HIS
123
1
7
18
A
SER
130
A
SER
130
HELX_P
A
VAL
142
A
VAL
142
1
8
13
disulf
2.032
A
CYS
19
A
SG
CYS
19
1_555
A
CYS
54
A
SG
CYS
54
1_555
disulf
2.034
A
CYS
50
A
SG
CYS
50
1_555
A
CYS
108
A
SG
CYS
108
1_555
disulf
2.036
A
CYS
97
A
SG
CYS
97
1_555
A
CYS
117
A
SG
CYS
117
1_555
TRANSPORT PROTEIN
TRANSPORT PROTEIN, INSECT ODORANT-BINDING PROTEIN, PH-DEPENDENT CONFORMATION, HELICAL INSERTION
PBP_BOMMO
UNP
1
P34174
23
164
1GM0
1
142
P34174
A
1
1
142
1
P 1