0.011062
0.000000
0.001752
0.000000
0.009132
0.000000
0.000000
0.000000
0.017396
0.000000
0.000000
0.000000
SEE REMARK 7.
RESIDUES 97 AND 150 OF EACH CHAIN ARE CIS PROLINES.
SEE REMARK 6.
Epp, O.
Ladenstein, R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
99.00
90.00
90.400
109.500
58.200
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O4 Se
200.052
n
2-AMINO-3-SELENINO-PROPIONIC ACID
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
IX
Eur.J.Biochem.
EJBCAI
0262
0014-2956
133
51
69
10.1111/j.1432-1033.1983.tb07429.x
6852035
The refined structure of the selenoenzyme glutathione peroxidase at 0.2-nm resolution.
1983
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
134
199
Structure Analysis and Molecular Model of the Selenoenzyme Glutathione Peroxidase at 2.8 Angstroms Resolution
1979
GW
Hoppe-Seyler's Z.Physiol.Chem.
HSZPAZ
0905
0018-4888
365
195
The Amino-Acid Sequence of Bovine Glutathione Peroxidase
1984
10.2210/pdb1gp1/pdb
pdb_00001gp1
0.987688
0.000000
0.156430
0.000000
1.000000
0.000000
-0.156430
0.000000
0.987688
0.000000
0.000000
0.000000
1
x-ray
1
1.0
21965.893
GLUTATHIONE PEROXIDASE
1.11.1.9
2
man
polymer
18.015
water
185
nat
water
no
yes
AAALAAAAPRTVYAFSARPLAGGEPFNLSSLRGKVLLIENVASL(SE7)GTTVRDYTQMNDLQRRLGPRGLVVLGFPCNQ
FGHQENAKNEEILNCLKYVRPGGGFEPNFMLFEKCEVNGEKAHPLFAFLREVLPTPSDDATALMTDPKFITWSPVCRNDV
SWNFEKFLVGPDGVPVRRYSRRFLTIDIEPDIETLLSQGASA
AAALAAAAPRTVYAFSARPLAGGEPFNLSSLRGKVLLIENVASLUGTTVRDYTQMNDLQRRLGPRGLVVLGFPCNQFGHQ
ENAKNEEILNCLKYVRPGGGFEPNFMLFEKCEVNGEKAHPLFAFLREVLPTPSDDATALMTDPKFITWSPVCRNDVSWNF
EKFLVGPDGVPVRRYSRRFLTIDIEPDIETLLSQGASA
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
bovine
ERYTHROCYTE
sample
9913
Bos taurus
3.24
61.99
entity_poly
pdbx_database_status
pdbx_unobs_or_zero_occ_atoms
struct_conf
struct_conf_type
atom_site
atom_sites
database_2
database_PDB_matrix
pdbx_database_remark
pdbx_unobs_or_zero_occ_atoms
pdbx_validate_main_chain_plane
pdbx_validate_peptide_omega
pdbx_validate_planes
pdbx_validate_rmsd_angle
pdbx_validate_rmsd_bond
pdbx_validate_symm_contact
pdbx_validate_torsion
struct_conn
struct_ncs_oper
struct_ref_seq_dif
repository
Initial release
Coordinates and associated ncs operations (if present) transformed into standard crystal frame
repository
Remediation
Version format compliance
Advisory
Version format compliance
Non-polymer description
Advisory
Derived calculations
Other
Polymer sequence
Advisory
Atomic model
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
1985-11-08
1
1
2008-03-24
1
2
2011-07-13
1
3
2013-12-25
2
0
2017-11-29
3
0
2023-07-26
_entity_poly.pdbx_seq_one_letter_code_can
_pdbx_database_status.process_site
_atom_site.Cartn_x
_atom_site.Cartn_z
_atom_sites.fract_transf_matrix[1][1]
_atom_sites.fract_transf_matrix[1][3]
_atom_sites.fract_transf_matrix[3][1]
_atom_sites.fract_transf_matrix[3][3]
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_database_PDB_matrix.origx[1][1]
_database_PDB_matrix.origx[1][3]
_database_PDB_matrix.origx[3][1]
_database_PDB_matrix.origx[3][3]
_pdbx_validate_main_chain_plane.improper_torsion_angle
_pdbx_validate_peptide_omega.omega
_pdbx_validate_planes.rmsd
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_bond.bond_deviation
_pdbx_validate_rmsd_bond.bond_value
_pdbx_validate_symm_contact.dist
_pdbx_validate_torsion.phi
_pdbx_validate_torsion.psi
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_ncs_oper.matrix[1][1]
_struct_ncs_oper.matrix[1][2]
_struct_ncs_oper.matrix[1][3]
_struct_ncs_oper.matrix[2][1]
_struct_ncs_oper.matrix[2][3]
_struct_ncs_oper.matrix[3][1]
_struct_ncs_oper.matrix[3][2]
_struct_ncs_oper.matrix[3][3]
_struct_ncs_oper.vector[1]
_struct_ncs_oper.vector[3]
_struct_ref_seq_dif.details
Y
BNL
1985-06-11
REL
REL
HOH
water
HOH
401
2
HOH
HOH
401
A
HOH
402
2
HOH
HOH
402
A
HOH
403
2
HOH
HOH
403
A
HOH
404
2
HOH
HOH
404
A
HOH
405
2
HOH
HOH
405
A
HOH
406
2
HOH
HOH
406
A
HOH
407
2
HOH
HOH
407
A
HOH
408
2
HOH
HOH
408
A
HOH
409
2
HOH
HOH
409
A
HOH
410
2
HOH
HOH
410
A
HOH
411
2
HOH
HOH
411
A
HOH
412
2
HOH
HOH
412
A
HOH
413
2
HOH
HOH
413
A
HOH
414
2
HOH
HOH
414
A
HOH
415
2
HOH
HOH
415
A
HOH
416
2
HOH
HOH
416
A
HOH
417
2
HOH
HOH
417
A
HOH
418
2
HOH
HOH
418
A
HOH
419
2
HOH
HOH
419
A
HOH
420
2
HOH
HOH
420
A
HOH
421
2
HOH
HOH
421
A
HOH
422
2
HOH
HOH
422
A
HOH
423
2
HOH
HOH
423
A
HOH
424
2
HOH
HOH
424
A
HOH
425
2
HOH
HOH
425
A
HOH
426
2
HOH
HOH
426
A
HOH
427
2
HOH
HOH
427
A
HOH
429
2
HOH
HOH
429
A
HOH
438
2
HOH
HOH
438
A
HOH
443
2
HOH
HOH
443
A
HOH
446
2
HOH
HOH
446
A
HOH
455
2
HOH
HOH
455
A
HOH
456
2
HOH
HOH
456
A
HOH
457
2
HOH
HOH
457
A
HOH
458
2
HOH
HOH
458
A
HOH
459
2
HOH
HOH
459
A
HOH
460
2
HOH
HOH
460
A
HOH
461
2
HOH
HOH
461
A
HOH
466
2
HOH
HOH
466
A
HOH
467
2
HOH
HOH
467
A
HOH
468
2
HOH
HOH
468
A
HOH
469
2
HOH
HOH
469
A
HOH
470
2
HOH
HOH
470
A
HOH
471
2
HOH
HOH
471
A
HOH
472
2
HOH
HOH
472
A
HOH
473
2
HOH
HOH
473
A
HOH
474
2
HOH
HOH
474
A
HOH
475
2
HOH
HOH
475
A
HOH
476
2
HOH
HOH
476
A
HOH
477
2
HOH
HOH
477
A
HOH
479
2
HOH
HOH
479
A
HOH
483
2
HOH
HOH
483
A
HOH
484
2
HOH
HOH
484
A
HOH
486
2
HOH
HOH
486
A
HOH
487
2
HOH
HOH
487
A
HOH
505
2
HOH
HOH
505
A
HOH
507
2
HOH
HOH
507
A
HOH
518
2
HOH
HOH
518
A
HOH
519
2
HOH
HOH
519
A
HOH
521
2
HOH
HOH
521
A
HOH
522
2
HOH
HOH
522
A
HOH
523
2
HOH
HOH
523
A
HOH
524
2
HOH
HOH
524
A
HOH
525
2
HOH
HOH
525
A
HOH
526
2
HOH
HOH
526
A
HOH
527
2
HOH
HOH
527
A
HOH
528
2
HOH
HOH
528
A
HOH
529
2
HOH
HOH
529
A
HOH
530
2
HOH
HOH
530
A
HOH
531
2
HOH
HOH
531
A
HOH
533
2
HOH
HOH
533
A
HOH
535
2
HOH
HOH
535
A
HOH
536
2
HOH
HOH
536
A
HOH
539
2
HOH
HOH
539
A
HOH
540
2
HOH
HOH
540
A
HOH
542
2
HOH
HOH
542
A
HOH
543
2
HOH
HOH
543
A
HOH
544
2
HOH
HOH
544
A
HOH
545
2
HOH
HOH
545
A
HOH
546
2
HOH
HOH
546
A
HOH
547
2
HOH
HOH
547
A
HOH
549
2
HOH
HOH
549
A
HOH
550
2
HOH
HOH
550
A
HOH
557
2
HOH
HOH
557
A
HOH
558
2
HOH
HOH
558
A
HOH
559
2
HOH
HOH
559
A
HOH
561
2
HOH
HOH
561
A
HOH
562
2
HOH
HOH
562
A
HOH
563
2
HOH
HOH
563
A
HOH
564
2
HOH
HOH
564
A
HOH
565
2
HOH
HOH
565
A
HOH
566
2
HOH
HOH
566
A
HOH
567
2
HOH
HOH
567
A
HOH
568
2
HOH
HOH
568
A
HOH
569
2
HOH
HOH
569
A
HOH
570
2
HOH
HOH
570
A
HOH
571
2
HOH
HOH
571
A
HOH
572
2
HOH
HOH
572
A
HOH
573
2
HOH
HOH
573
A
HOH
428
2
HOH
HOH
428
B
HOH
430
2
HOH
HOH
430
B
HOH
431
2
HOH
HOH
431
B
HOH
432
2
HOH
HOH
432
B
HOH
433
2
HOH
HOH
433
B
HOH
434
2
HOH
HOH
434
B
HOH
435
2
HOH
HOH
435
B
HOH
436
2
HOH
HOH
436
B
HOH
437
2
HOH
HOH
437
B
HOH
439
2
HOH
HOH
439
B
HOH
440
2
HOH
HOH
440
B
HOH
441
2
HOH
HOH
441
B
HOH
442
2
HOH
HOH
442
B
HOH
444
2
HOH
HOH
444
B
HOH
445
2
HOH
HOH
445
B
HOH
447
2
HOH
HOH
447
B
HOH
448
2
HOH
HOH
448
B
HOH
449
2
HOH
HOH
449
B
HOH
450
2
HOH
HOH
450
B
HOH
451
2
HOH
HOH
451
B
HOH
452
2
HOH
HOH
452
B
HOH
453
2
HOH
HOH
453
B
HOH
454
2
HOH
HOH
454
B
HOH
462
2
HOH
HOH
462
B
HOH
463
2
HOH
HOH
463
B
HOH
464
2
HOH
HOH
464
B
HOH
465
2
HOH
HOH
465
B
HOH
478
2
HOH
HOH
478
B
HOH
480
2
HOH
HOH
480
B
HOH
481
2
HOH
HOH
481
B
HOH
482
2
HOH
HOH
482
B
HOH
485
2
HOH
HOH
485
B
HOH
488
2
HOH
HOH
488
B
HOH
489
2
HOH
HOH
489
B
HOH
490
2
HOH
HOH
490
B
HOH
491
2
HOH
HOH
491
B
HOH
492
2
HOH
HOH
492
B
HOH
493
2
HOH
HOH
493
B
HOH
494
2
HOH
HOH
494
B
HOH
495
2
HOH
HOH
495
B
HOH
496
2
HOH
HOH
496
B
HOH
497
2
HOH
HOH
497
B
HOH
498
2
HOH
HOH
498
B
HOH
499
2
HOH
HOH
499
B
HOH
500
2
HOH
HOH
500
B
HOH
501
2
HOH
HOH
501
B
HOH
502
2
HOH
HOH
502
B
HOH
503
2
HOH
HOH
503
B
HOH
504
2
HOH
HOH
504
B
HOH
506
2
HOH
HOH
506
B
HOH
508
2
HOH
HOH
508
B
HOH
509
2
HOH
HOH
509
B
HOH
510
2
HOH
HOH
510
B
HOH
511
2
HOH
HOH
511
B
HOH
512
2
HOH
HOH
512
B
HOH
513
2
HOH
HOH
513
B
HOH
514
2
HOH
HOH
514
B
HOH
515
2
HOH
HOH
515
B
HOH
516
2
HOH
HOH
516
B
HOH
517
2
HOH
HOH
517
B
HOH
520
2
HOH
HOH
520
B
HOH
532
2
HOH
HOH
532
B
HOH
534
2
HOH
HOH
534
B
HOH
537
2
HOH
HOH
537
B
HOH
538
2
HOH
HOH
538
B
HOH
541
2
HOH
HOH
541
B
HOH
548
2
HOH
HOH
548
B
HOH
551
2
HOH
HOH
551
B
HOH
552
2
HOH
HOH
552
B
HOH
553
2
HOH
HOH
553
B
HOH
554
2
HOH
HOH
554
B
HOH
555
2
HOH
HOH
555
B
HOH
556
2
HOH
HOH
556
B
HOH
560
2
HOH
HOH
560
B
HOH
574
2
HOH
HOH
574
B
HOH
575
2
HOH
HOH
575
B
HOH
576
2
HOH
HOH
576
B
HOH
577
2
HOH
HOH
577
B
HOH
578
2
HOH
HOH
578
B
HOH
579
2
HOH
HOH
579
B
HOH
580
2
HOH
HOH
580
B
HOH
581
2
HOH
HOH
581
B
HOH
582
2
HOH
HOH
582
B
HOH
583
2
HOH
HOH
583
B
HOH
584
2
HOH
HOH
584
B
HOH
585
2
HOH
HOH
585
B
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
n
7
7
A
n
8
8
A
n
9
9
A
ARG
10
n
10
ARG
10
A
THR
11
n
11
THR
11
A
VAL
12
n
12
VAL
12
A
TYR
13
n
13
TYR
13
A
ALA
14
n
14
ALA
14
A
PHE
15
n
15
PHE
15
A
SER
16
n
16
SER
16
A
ALA
17
n
17
ALA
17
A
ARG
18
n
18
ARG
18
A
PRO
19
n
19
PRO
19
A
LEU
20
n
20
LEU
20
A
ALA
21
n
21
ALA
21
A
GLY
22
n
22
GLY
22
A
GLY
23
n
23
GLY
23
A
GLU
24
n
24
GLU
24
A
PRO
25
n
25
PRO
25
A
PHE
26
n
26
PHE
26
A
ASN
27
n
27
ASN
27
A
LEU
28
n
28
LEU
28
A
SER
29
n
29
SER
29
A
SER
30
n
30
SER
30
A
LEU
31
n
31
LEU
31
A
ARG
32
n
32
ARG
32
A
GLY
33
n
33
GLY
33
A
LYS
34
n
34
LYS
34
A
VAL
35
n
35
VAL
35
A
LEU
36
n
36
LEU
36
A
LEU
37
n
37
LEU
37
A
ILE
38
n
38
ILE
38
A
GLU
39
n
39
GLU
39
A
ASN
40
n
40
ASN
40
A
VAL
41
n
41
VAL
41
A
ALA
42
n
42
ALA
42
A
SER
43
n
43
SER
43
A
LEU
44
n
44
LEU
44
A
SE7
45
n
45
SE7
45
A
GLY
46
n
46
GLY
46
A
THR
47
n
47
THR
47
A
THR
48
n
48
THR
48
A
VAL
49
n
49
VAL
49
A
ARG
50
n
50
ARG
50
A
ASP
51
n
51
ASP
51
A
TYR
52
n
52
TYR
52
A
THR
53
n
53
THR
53
A
GLN
54
n
54
GLN
54
A
MET
55
n
55
MET
55
A
ASN
56
n
56
ASN
56
A
ASP
57
n
57
ASP
57
A
LEU
58
n
58
LEU
58
A
GLN
59
n
59
GLN
59
A
ARG
60
n
60
ARG
60
A
ARG
61
n
61
ARG
61
A
LEU
62
n
62
LEU
62
A
GLY
63
n
63
GLY
63
A
PRO
64
n
64
PRO
64
A
ARG
65
n
65
ARG
65
A
GLY
66
n
66
GLY
66
A
LEU
67
n
67
LEU
67
A
VAL
68
n
68
VAL
68
A
VAL
69
n
69
VAL
69
A
LEU
70
n
70
LEU
70
A
GLY
71
n
71
GLY
71
A
PHE
72
n
72
PHE
72
A
PRO
73
n
73
PRO
73
A
CYS
74
n
74
CYS
74
A
ASN
75
n
75
ASN
75
A
GLN
76
n
76
GLN
76
A
PHE
77
n
77
PHE
77
A
GLY
78
n
78
GLY
78
A
HIS
79
n
79
HIS
79
A
GLN
80
n
80
GLN
80
A
GLU
81
n
81
GLU
81
A
ASN
82
n
82
ASN
82
A
ALA
83
n
83
ALA
83
A
LYS
84
n
84
LYS
84
A
ASN
85
n
85
ASN
85
A
GLU
86
n
86
GLU
86
A
GLU
87
n
87
GLU
87
A
ILE
88
n
88
ILE
88
A
LEU
89
n
89
LEU
89
A
ASN
90
n
90
ASN
90
A
CYS
91
n
91
CYS
91
A
LEU
92
n
92
LEU
92
A
LYS
93
n
93
LYS
93
A
TYR
94
n
94
TYR
94
A
VAL
95
n
95
VAL
95
A
ARG
96
n
96
ARG
96
A
PRO
97
n
97
PRO
97
A
GLY
98
n
98
GLY
98
A
GLY
99
n
99
GLY
99
A
GLY
100
n
100
GLY
100
A
PHE
101
n
101
PHE
101
A
GLU
102
n
102
GLU
102
A
PRO
103
n
103
PRO
103
A
ASN
104
n
104
ASN
104
A
PHE
105
n
105
PHE
105
A
MET
106
n
106
MET
106
A
LEU
107
n
107
LEU
107
A
PHE
108
n
108
PHE
108
A
GLU
109
n
109
GLU
109
A
LYS
110
n
110
LYS
110
A
CYS
111
n
111
CYS
111
A
GLU
112
n
112
GLU
112
A
VAL
113
n
113
VAL
113
A
ASN
114
n
114
ASN
114
A
GLY
115
n
115
GLY
115
A
GLU
116
n
116
GLU
116
A
LYS
117
n
117
LYS
117
A
ALA
118
n
118
ALA
118
A
HIS
119
n
119
HIS
119
A
PRO
120
n
120
PRO
120
A
LEU
121
n
121
LEU
121
A
PHE
122
n
122
PHE
122
A
ALA
123
n
123
ALA
123
A
PHE
124
n
124
PHE
124
A
LEU
125
n
125
LEU
125
A
ARG
126
n
126
ARG
126
A
GLU
127
n
127
GLU
127
A
VAL
128
n
128
VAL
128
A
LEU
129
n
129
LEU
129
A
PRO
130
n
130
PRO
130
A
THR
131
n
131
THR
131
A
PRO
132
n
132
PRO
132
A
SER
133
n
133
SER
133
A
ASP
134
n
134
ASP
134
A
ASP
135
n
135
ASP
135
A
ALA
136
n
136
ALA
136
A
THR
137
n
137
THR
137
A
ALA
138
n
138
ALA
138
A
LEU
139
n
139
LEU
139
A
MET
140
n
140
MET
140
A
THR
141
n
141
THR
141
A
ASP
142
n
142
ASP
142
A
PRO
143
n
143
PRO
143
A
LYS
144
n
144
LYS
144
A
PHE
145
n
145
PHE
145
A
ILE
146
n
146
ILE
146
A
THR
147
n
147
THR
147
A
TRP
148
n
148
TRP
148
A
SER
149
n
149
SER
149
A
PRO
150
n
150
PRO
150
A
VAL
151
n
151
VAL
151
A
CYS
152
n
152
CYS
152
A
ARG
153
n
153
ARG
153
A
ASN
154
n
154
ASN
154
A
ASP
155
n
155
ASP
155
A
VAL
156
n
156
VAL
156
A
SER
157
n
157
SER
157
A
TRP
158
n
158
TRP
158
A
ASN
159
n
159
ASN
159
A
PHE
160
n
160
PHE
160
A
GLU
161
n
161
GLU
161
A
LYS
162
n
162
LYS
162
A
PHE
163
n
163
PHE
163
A
LEU
164
n
164
LEU
164
A
VAL
165
n
165
VAL
165
A
GLY
166
n
166
GLY
166
A
PRO
167
n
167
PRO
167
A
ASP
168
n
168
ASP
168
A
GLY
169
n
169
GLY
169
A
VAL
170
n
170
VAL
170
A
PRO
171
n
171
PRO
171
A
VAL
172
n
172
VAL
172
A
ARG
173
n
173
ARG
173
A
ARG
174
n
174
ARG
174
A
TYR
175
n
175
TYR
175
A
SER
176
n
176
SER
176
A
ARG
177
n
177
ARG
177
A
ARG
178
n
178
ARG
178
A
PHE
179
n
179
PHE
179
A
LEU
180
n
180
LEU
180
A
THR
181
n
181
THR
181
A
ILE
182
n
182
ILE
182
A
ASP
183
n
183
ASP
183
A
ILE
184
n
184
ILE
184
A
GLU
185
n
185
GLU
185
A
PRO
186
n
186
PRO
186
A
ASP
187
n
187
ASP
187
A
ILE
188
n
188
ILE
188
A
GLU
189
n
189
GLU
189
A
THR
190
n
190
THR
190
A
LEU
191
n
191
LEU
191
A
LEU
192
n
192
LEU
192
A
SER
193
n
193
SER
193
A
GLN
194
n
194
GLN
194
A
n
195
195
A
n
196
196
A
n
197
197
A
n
198
198
A
n
1
1
B
n
2
2
B
n
3
3
B
n
4
4
B
n
5
5
B
n
6
6
B
n
7
7
B
n
8
8
B
n
9
9
B
ARG
10
n
10
ARG
10
B
THR
11
n
11
THR
11
B
VAL
12
n
12
VAL
12
B
TYR
13
n
13
TYR
13
B
ALA
14
n
14
ALA
14
B
PHE
15
n
15
PHE
15
B
SER
16
n
16
SER
16
B
ALA
17
n
17
ALA
17
B
ARG
18
n
18
ARG
18
B
PRO
19
n
19
PRO
19
B
LEU
20
n
20
LEU
20
B
ALA
21
n
21
ALA
21
B
GLY
22
n
22
GLY
22
B
GLY
23
n
23
GLY
23
B
GLU
24
n
24
GLU
24
B
PRO
25
n
25
PRO
25
B
PHE
26
n
26
PHE
26
B
ASN
27
n
27
ASN
27
B
LEU
28
n
28
LEU
28
B
SER
29
n
29
SER
29
B
SER
30
n
30
SER
30
B
LEU
31
n
31
LEU
31
B
ARG
32
n
32
ARG
32
B
GLY
33
n
33
GLY
33
B
LYS
34
n
34
LYS
34
B
VAL
35
n
35
VAL
35
B
LEU
36
n
36
LEU
36
B
LEU
37
n
37
LEU
37
B
ILE
38
n
38
ILE
38
B
GLU
39
n
39
GLU
39
B
ASN
40
n
40
ASN
40
B
VAL
41
n
41
VAL
41
B
ALA
42
n
42
ALA
42
B
SER
43
n
43
SER
43
B
LEU
44
n
44
LEU
44
B
SE7
45
n
45
SE7
45
B
GLY
46
n
46
GLY
46
B
THR
47
n
47
THR
47
B
THR
48
n
48
THR
48
B
VAL
49
n
49
VAL
49
B
ARG
50
n
50
ARG
50
B
ASP
51
n
51
ASP
51
B
TYR
52
n
52
TYR
52
B
THR
53
n
53
THR
53
B
GLN
54
n
54
GLN
54
B
MET
55
n
55
MET
55
B
ASN
56
n
56
ASN
56
B
ASP
57
n
57
ASP
57
B
LEU
58
n
58
LEU
58
B
GLN
59
n
59
GLN
59
B
ARG
60
n
60
ARG
60
B
ARG
61
n
61
ARG
61
B
LEU
62
n
62
LEU
62
B
GLY
63
n
63
GLY
63
B
PRO
64
n
64
PRO
64
B
ARG
65
n
65
ARG
65
B
GLY
66
n
66
GLY
66
B
LEU
67
n
67
LEU
67
B
VAL
68
n
68
VAL
68
B
VAL
69
n
69
VAL
69
B
LEU
70
n
70
LEU
70
B
GLY
71
n
71
GLY
71
B
PHE
72
n
72
PHE
72
B
PRO
73
n
73
PRO
73
B
CYS
74
n
74
CYS
74
B
ASN
75
n
75
ASN
75
B
GLN
76
n
76
GLN
76
B
PHE
77
n
77
PHE
77
B
GLY
78
n
78
GLY
78
B
HIS
79
n
79
HIS
79
B
GLN
80
n
80
GLN
80
B
GLU
81
n
81
GLU
81
B
ASN
82
n
82
ASN
82
B
ALA
83
n
83
ALA
83
B
LYS
84
n
84
LYS
84
B
ASN
85
n
85
ASN
85
B
GLU
86
n
86
GLU
86
B
GLU
87
n
87
GLU
87
B
ILE
88
n
88
ILE
88
B
LEU
89
n
89
LEU
89
B
ASN
90
n
90
ASN
90
B
CYS
91
n
91
CYS
91
B
LEU
92
n
92
LEU
92
B
LYS
93
n
93
LYS
93
B
TYR
94
n
94
TYR
94
B
VAL
95
n
95
VAL
95
B
ARG
96
n
96
ARG
96
B
PRO
97
n
97
PRO
97
B
GLY
98
n
98
GLY
98
B
GLY
99
n
99
GLY
99
B
GLY
100
n
100
GLY
100
B
PHE
101
n
101
PHE
101
B
GLU
102
n
102
GLU
102
B
PRO
103
n
103
PRO
103
B
ASN
104
n
104
ASN
104
B
PHE
105
n
105
PHE
105
B
MET
106
n
106
MET
106
B
LEU
107
n
107
LEU
107
B
PHE
108
n
108
PHE
108
B
GLU
109
n
109
GLU
109
B
LYS
110
n
110
LYS
110
B
CYS
111
n
111
CYS
111
B
GLU
112
n
112
GLU
112
B
VAL
113
n
113
VAL
113
B
ASN
114
n
114
ASN
114
B
GLY
115
n
115
GLY
115
B
GLU
116
n
116
GLU
116
B
LYS
117
n
117
LYS
117
B
ALA
118
n
118
ALA
118
B
HIS
119
n
119
HIS
119
B
PRO
120
n
120
PRO
120
B
LEU
121
n
121
LEU
121
B
PHE
122
n
122
PHE
122
B
ALA
123
n
123
ALA
123
B
PHE
124
n
124
PHE
124
B
LEU
125
n
125
LEU
125
B
ARG
126
n
126
ARG
126
B
GLU
127
n
127
GLU
127
B
VAL
128
n
128
VAL
128
B
LEU
129
n
129
LEU
129
B
PRO
130
n
130
PRO
130
B
THR
131
n
131
THR
131
B
PRO
132
n
132
PRO
132
B
SER
133
n
133
SER
133
B
ASP
134
n
134
ASP
134
B
ASP
135
n
135
ASP
135
B
ALA
136
n
136
ALA
136
B
THR
137
n
137
THR
137
B
ALA
138
n
138
ALA
138
B
LEU
139
n
139
LEU
139
B
MET
140
n
140
MET
140
B
THR
141
n
141
THR
141
B
ASP
142
n
142
ASP
142
B
PRO
143
n
143
PRO
143
B
LYS
144
n
144
LYS
144
B
PHE
145
n
145
PHE
145
B
ILE
146
n
146
ILE
146
B
THR
147
n
147
THR
147
B
TRP
148
n
148
TRP
148
B
SER
149
n
149
SER
149
B
PRO
150
n
150
PRO
150
B
VAL
151
n
151
VAL
151
B
CYS
152
n
152
CYS
152
B
ARG
153
n
153
ARG
153
B
ASN
154
n
154
ASN
154
B
ASP
155
n
155
ASP
155
B
VAL
156
n
156
VAL
156
B
SER
157
n
157
SER
157
B
TRP
158
n
158
TRP
158
B
ASN
159
n
159
ASN
159
B
PHE
160
n
160
PHE
160
B
GLU
161
n
161
GLU
161
B
LYS
162
n
162
LYS
162
B
PHE
163
n
163
PHE
163
B
LEU
164
n
164
LEU
164
B
VAL
165
n
165
VAL
165
B
GLY
166
n
166
GLY
166
B
PRO
167
n
167
PRO
167
B
ASP
168
n
168
ASP
168
B
GLY
169
n
169
GLY
169
B
VAL
170
n
170
VAL
170
B
PRO
171
n
171
PRO
171
B
VAL
172
n
172
VAL
172
B
ARG
173
n
173
ARG
173
B
ARG
174
n
174
ARG
174
B
TYR
175
n
175
TYR
175
B
SER
176
n
176
SER
176
B
ARG
177
n
177
ARG
177
B
ARG
178
n
178
ARG
178
B
PHE
179
n
179
PHE
179
B
LEU
180
n
180
LEU
180
B
THR
181
n
181
THR
181
B
ILE
182
n
182
ILE
182
B
ASP
183
n
183
ASP
183
B
ILE
184
n
184
ILE
184
B
GLU
185
n
185
GLU
185
B
PRO
186
n
186
PRO
186
B
ASP
187
n
187
ASP
187
B
ILE
188
n
188
ILE
188
B
GLU
189
n
189
GLU
189
B
THR
190
n
190
THR
190
B
LEU
191
n
191
LEU
191
B
LEU
192
n
192
LEU
192
B
SER
193
n
193
SER
193
B
GLN
194
n
194
GLN
194
B
n
195
195
B
n
196
196
B
n
197
197
B
n
198
198
B
author_defined_assembly
4
tetrameric
A
SE7
45
2-AMINO-3-SELENINO-PROPIONIC ACID
A
SE7
45
ALA
B
SE7
45
2-AMINO-3-SELENINO-PROPIONIC ACID
B
SE7
45
ALA
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
2_657
-x+1,y,-z+2
crystal symmetry operation
89.2857142857
0.0000000000
102.2612950430
1
A
CG
GLU
24
A
CG
GLU
24
0
Y
1
A
CD
GLU
24
A
CD
GLU
24
0
Y
1
A
OE1
GLU
24
A
OE1
GLU
24
0
Y
1
A
OE2
GLU
24
A
OE2
GLU
24
0
Y
1
A
CA
GLN
194
A
CA
GLN
194
1
Y
1
A
C
GLN
194
A
C
GLN
194
1
Y
1
A
O
GLN
194
A
O
GLN
194
1
Y
1
A
CB
GLN
194
A
CB
GLN
194
1
Y
1
A
CG
GLN
194
A
CG
GLN
194
1
Y
1
A
CD
GLN
194
A
CD
GLN
194
1
Y
1
A
OE1
GLN
194
A
OE1
GLN
194
1
Y
1
A
NE2
GLN
194
A
NE2
GLN
194
1
Y
1
B
CG
GLU
24
B
CG
GLU
24
0
Y
1
B
CD
GLU
24
B
CD
GLU
24
0
Y
1
B
OE1
GLU
24
B
OE1
GLU
24
0
Y
1
B
OE2
GLU
24
B
OE2
GLU
24
0
Y
1
B
NZ
LYS
144
B
NZ
LYS
144
0
Y
1
B
CA
GLN
194
B
CA
GLN
194
1
Y
1
B
C
GLN
194
B
C
GLN
194
1
Y
1
B
O
GLN
194
B
O
GLN
194
1
Y
1
B
CB
GLN
194
B
CB
GLN
194
1
Y
1
B
CG
GLN
194
B
CG
GLN
194
1
Y
1
B
CD
GLN
194
B
CD
GLN
194
1
Y
1
B
OE1
GLN
194
B
OE1
GLN
194
1
Y
1
B
NE2
GLN
194
B
NE2
GLN
194
1
Y
1
A
ALA
1
A
ALA
1
1
Y
1
A
ALA
2
A
ALA
2
1
Y
1
A
ALA
3
A
ALA
3
1
Y
1
A
LEU
4
A
LEU
4
1
Y
1
A
ALA
5
A
ALA
5
1
Y
1
A
ALA
6
A
ALA
6
1
Y
1
A
ALA
7
A
ALA
7
1
Y
1
A
ALA
8
A
ALA
8
1
Y
1
A
PRO
9
A
PRO
9
1
Y
1
A
GLY
195
A
GLY
195
1
Y
1
A
ALA
196
A
ALA
196
1
Y
1
A
SER
197
A
SER
197
1
Y
1
A
ALA
198
A
ALA
198
1
Y
1
B
ALA
1
B
ALA
1
1
Y
1
B
ALA
2
B
ALA
2
1
Y
1
B
ALA
3
B
ALA
3
1
Y
1
B
LEU
4
B
LEU
4
1
Y
1
B
ALA
5
B
ALA
5
1
Y
1
B
ALA
6
B
ALA
6
1
Y
1
B
ALA
7
B
ALA
7
1
Y
1
B
ALA
8
B
ALA
8
1
Y
1
B
PRO
9
B
PRO
9
1
Y
1
B
GLY
195
B
GLY
195
1
Y
1
B
ALA
196
B
ALA
196
1
Y
1
B
SER
197
B
SER
197
1
Y
1
B
ALA
198
B
ALA
198
1
Y
1
A
GLU
81
11.96
1
A
SER
157
11.73
1
A
PHE
160
-11.85
1
A
PRO
171
11.35
1
A
SER
193
11.73
1
B
GLU
24
11.41
1
B
PRO
25
12.02
1
B
SER
30
13.00
1
B
VAL
35
10.14
1
B
LEU
37
10.76
1
B
VAL
156
11.51
1
B
SER
157
14.16
1
B
PHE
160
-11.40
1
A
A
PHE
GLU
160
161
149.53
1
A
ASN
27
0.110
SIDE CHAIN
1
A
GLU
39
0.081
SIDE CHAIN
1
A
ASP
57
0.079
SIDE CHAIN
1
A
GLN
80
0.100
SIDE CHAIN
1
A
GLU
87
0.114
SIDE CHAIN
1
A
ARG
96
0.169
SIDE CHAIN
1
A
GLU
127
0.086
SIDE CHAIN
1
A
ARG
153
0.080
SIDE CHAIN
1
A
ASN
159
0.073
SIDE CHAIN
1
A
ASP
168
0.079
SIDE CHAIN
1
A
ASP
183
0.076
SIDE CHAIN
1
A
GLU
185
0.086
SIDE CHAIN
1
A
ASP
187
0.094
SIDE CHAIN
1
B
ASN
27
0.073
SIDE CHAIN
1
B
GLU
39
0.092
SIDE CHAIN
1
B
GLN
59
0.083
SIDE CHAIN
1
B
GLN
80
0.096
SIDE CHAIN
1
B
GLU
87
0.073
SIDE CHAIN
1
B
ASN
104
0.085
SIDE CHAIN
1
B
GLU
185
0.078
SIDE CHAIN
1
B
ASP
187
0.078
SIDE CHAIN
1
3.79
0.50
120.30
124.09
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
60
60
60
N
1
3.05
0.50
120.30
123.35
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
61
61
61
N
1
-3.87
0.50
120.30
116.43
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
65
65
65
N
1
-8.01
1.20
123.30
115.29
A
A
A
OE1
CD
OE2
GLU
GLU
GLU
87
87
87
N
1
6.57
0.50
120.30
126.87
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
96
96
96
N
1
-8.17
0.50
120.30
112.13
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
96
96
96
N
1
5.45
0.50
120.30
125.75
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
126
126
126
N
1
-7.33
0.50
120.30
112.97
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
126
126
126
N
1
-5.03
0.50
120.30
115.27
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
153
153
153
N
1
-5.96
0.50
120.30
114.34
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
177
177
177
N
1
3.43
0.50
120.30
123.73
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
60
60
60
N
1
-4.71
0.50
120.30
115.59
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
60
60
60
N
1
3.87
0.50
120.30
124.17
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
96
96
96
N
1
-5.58
0.50
120.30
114.72
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
96
96
96
N
1
-3.21
0.50
120.30
117.09
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
126
126
126
N
1
6.22
0.90
118.30
124.52
B
B
B
CB
CG
OD1
ASP
ASP
ASP
142
142
142
N
1
3.76
0.50
120.30
124.06
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
153
153
153
N
1
-3.43
0.50
120.30
116.87
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
173
173
173
N
1
A
A
NE1
CE2
TRP
TRP
148
148
-0.083
0.013
1.371
1.288
N
1
A
A
NE1
CE2
TRP
TRP
158
158
-0.103
0.013
1.371
1.268
N
1
B
B
NE1
CE2
TRP
TRP
148
148
-0.092
0.013
1.371
1.279
N
1
B
B
NE1
CE2
TRP
TRP
158
158
-0.094
0.013
1.371
1.277
N
1
B
B
OE2
O
GLU
HOH
161
578
0.83
1_555
2_657
1
B
B
O
O
HOH
HOH
430
430
1.25
1_555
2_657
1
B
B
CD
O
GLU
HOH
161
578
1.51
1_555
2_657
1
B
B
OE1
O
GLU
HOH
161
578
2.09
1_555
2_657
1
A
GLU
24
144.34
87.77
1
A
GLU
81
-142.40
50.97
1
A
VAL
95
-107.32
-61.45
1
A
ASP
135
-159.26
82.94
1
A
LEU
139
-107.01
-61.75
1
B
GLU
24
178.33
97.06
1
B
LEU
139
-124.37
-53.49
AN OCCUPANCY OF 0.0 INDICATES THAT NO SIGNIFICANT ELECTRON
DENSITY WAS FOUND IN THE FINAL FOURIER MAP.
0.1710000
2.0
6.0
1
2.0
6.0
185
3111
0
0
2926
0.013
2.1
0.23
refinement
EREF
THE REFINED STRUCTURE OF THE SELENOENZYME GLUTATHIONE PEROXIDASE AT 0.2-NM RESOLUTION
1
N
N
1
N
N
2
N
N
2
N
N
A
VAL
12
A
VAL
12
HELX_P
A
ALA
14
A
ALA
14
5
H1A
3
A
LEU
28
A
LEU
28
HELX_P
A
SER
30
A
SER
30
5
H2A
3
A
THR
48
A
THR
48
HELX_P
A
GLY
63
A
GLY
63
1
H3A
16
A
ASN
85
A
ASN
85
HELX_P
A
LYS
93
A
LYS
93
1
H4A
9
A
PRO
120
A
PRO
120
HELX_P
A
VAL
128
A
VAL
128
1
H5A
9
A
PRO
143
A
PRO
143
HELX_P
A
PHE
145
A
PHE
145
5
H6A
3
A
ILE
184
A
ILE
184
HELX_P
A
SER
193
A
SER
193
1
H7A
10
B
VAL
12
B
VAL
12
HELX_P
B
ALA
14
B
ALA
14
5
H1B
3
B
LEU
28
B
LEU
28
HELX_P
B
SER
30
B
SER
30
5
H2B
3
B
THR
48
B
THR
48
HELX_P
B
GLY
63
B
GLY
63
1
H3B
16
B
ASN
85
B
ASN
85
HELX_P
B
LYS
93
B
LYS
93
1
H4B
9
B
PRO
120
B
PRO
120
HELX_P
B
VAL
128
B
VAL
128
1
H5B
9
B
PRO
143
B
PRO
143
HELX_P
B
PHE
145
B
PHE
145
5
H6B
3
B
ILE
184
B
ILE
184
HELX_P
B
SER
193
B
SER
193
1
H7B
10
covale
1.351
both
A
LEU
44
A
C
LEU
44
1_555
A
SE7
45
A
N
SE7
45
1_555
covale
1.318
both
A
SE7
45
A
C
SE7
45
1_555
A
GLY
46
A
N
GLY
46
1_555
covale
1.330
both
B
LEU
44
B
C
LEU
44
1_555
B
SE7
45
B
N
SE7
45
1_555
covale
1.300
both
B
SE7
45
B
C
SE7
45
1_555
B
GLY
46
B
N
GLY
46
1_555
OXIDOREDUCTASE(H2O2(A))
OXIDOREDUCTASE(H2O2(A))
A
ARG
96
A
ARG
96
1
A
PRO
97
A
PRO
97
3.74
A
SER
149
A
SER
149
1
A
PRO
150
A
PRO
150
-6.77
B
ARG
96
B
ARG
96
1
B
PRO
97
B
PRO
97
8.54
B
SER
149
B
SER
149
1
B
PRO
150
B
PRO
150
-6.86
given
0.131858
-0.010348
0.991227
0.002370
-0.999940
-0.010752
0.991204
0.003773
-0.131818
-25.027450
75.568790
29.048190
GPX1_BOVIN
UNP
1
1
P00435
MCAAQRSAAALAAAAPRTVYAFSARPLAGGEPFNLSSLRGKVLLIENVASLCGTTVRDYTQMNDLQRRLGPRGLVVLGFP
CNQFGHQENAKNEEILNCLKYVRPGGGFEPNFMLFEKCEVNGEKAHPLFAFLREVLPTPSDDATALMTDPKFITWSPVCR
NDVSWNFEKFLVGPDGVPVRRYSRRFLTIDIEPDIETLLSQGASA
8
205
1GP1
1
198
P00435
A
1
1
198
8
205
1GP1
1
198
P00435
B
1
1
198
1
CYS
conflict
SE7
45
1GP1
A
P00435
UNP
52
45
2
CYS
conflict
SE7
45
1GP1
B
P00435
UNP
52
45
4
4
parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
GLY
66
A
GLY
66
A
CYS
74
A
CYS
74
A
VAL
35
A
VAL
35
A
VAL
41
A
VAL
41
A
PHE
160
A
PHE
160
A
GLY
166
A
GLY
166
A
VAL
170
A
VAL
170
A
TYR
175
A
TYR
175
B
GLY
66
B
GLY
66
B
CYS
74
B
CYS
74
B
VAL
35
B
VAL
35
B
VAL
41
B
VAL
41
B
PHE
160
B
PHE
160
B
GLY
166
B
GLY
166
B
VAL
170
B
VAL
170
B
TYR
175
B
TYR
175
5
C 1 2 1