0.012674
0.000000
0.000000
0.000000
0.012674
0.000000
0.000000
0.000000
0.011223
0.00000
0.00000
0.00000
Delbaere, L.T.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
78.900
78.900
89.100
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C6 H12 O6
180.156
beta-D-mannopyranose
D-saccharide, beta linking
Ca 2
40.078
CALCIUM ION
non-polymer
C6 H12 O5
164.156
alpha-L-fucopyranose
L-saccharide, alpha linking
C6 H12 O6
180.156
beta-D-galactopyranose
D-saccharide, beta linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C9 H17 N O6
235.234
n
methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside
D-saccharide
Mn 2
54.938
MANGANESE (II) ION
non-polymer
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
D-saccharide, beta linking
C5 H7 N O3
129.114
n
PYROGLUTAMIC ACID
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
230
950
965
10.1006/jmbi.1993.1212
8478943
Structures of the lectin IV of Griffonia simplicifolia and its complex with the Lewis b human blood group determinant at 2.0 A resolution.
1993
CA
Can.J.Chem.
CJCHAG
0015
0008-4042
63
2644
Molecular Recognition. II. The Binding of the Lewis B and Y Human Blood Group Determinants by the Lectin Iv of Griffonia Simplicifolia
1985
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
DIFFRACTOMETER
1992-12-02
ENRAF-NONIUS FAST
M
x-ray
1
1.5418
1.0
1.5418
26816.678
GRIFFONIA SIMPLICIFOLIA LECTIN 4
1
nat
polymer
689.656
alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside
1
man
branched
732.682
beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose
1
man
branched
54.938
MANGANESE (II) ION
1
syn
non-polymer
40.078
CALCIUM ION
1
syn
non-polymer
18.015
water
163
nat
water
no
yes
(PCA)NTVNFTYPDFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVFLWDSTGKAASFYTSF
TFLLKNYGAPTADGLAFFLAPVDSSVKDYGGFLGLFRHETAADPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSV
ATTRWENDDAYGSSIATAHITYDARSKILTVLLSYEHGRDYILSHVVDLAKVLPQKVRIGFSAGVGYDEVTYILSWHFFS
TLDGTNK
QNTVNFTYPDFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVFLWDSTGKAASFYTSFTFLL
KNYGAPTADGLAFFLAPVDSSVKDYGGFLGLFRHETAADPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVATTR
WENDDAYGSSIATAHITYDARSKILTVLLSYEHGRDYILSHVVDLAKVLPQKVRIGFSAGVGYDEVTYILSWHFFSTLDG
TNK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Griffonia
sample
3850
SEEDS
Griffonia simplicifolia
2.58
52.
diffrn_detector
pdbx_database_status
chem_comp
entity_poly
pdbx_struct_mod_residue
struct_conn
atom_site
chem_comp
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
pdbx_struct_conn_angle
pdbx_struct_special_symmetry
struct_asym
struct_conn
struct_site
struct_site_gen
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Non-polymer description
Version format compliance
Data collection
Other
Data collection
Derived calculations
Polymer sequence
Atomic model
Data collection
Derived calculations
Structure summary
1
0
1996-12-23
1
1
2008-03-24
1
2
2011-07-13
1
3
2018-04-18
2
0
2019-12-25
3
0
2020-07-29
_diffrn_detector.detector
_pdbx_database_status.process_site
_chem_comp.type
_entity_poly.pdbx_seq_one_letter_code_can
_pdbx_struct_mod_residue.parent_comp_id
_struct_conn.pdbx_leaving_atom_flag
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.type_symbol
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.type
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_pdbx_struct_special_symmetry.label_asym_id
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
MAG
255
n
B
MAG
1
GAL
253
n
B
GAL
2
FUC
252
n
B
FUC
3
FUC
254
n
B
FUC
4
NAG
257
n
C
NAG
1
NAG
256
n
C
NAG
2
MAN
258
n
C
BMA
3
FUC
262
n
C
FUC
4
DManpb
b-D-mannopyranose
b-D-Manp
Man
LFucpa
a-L-fucopyranose
a-L-Fucp
Fuc
DGalpb
b-D-galactopyranose
b-D-Galp
Gal
DGlcpNAc[1Me]b
1-methyl-N-acetyl-b-D-glucopyranose
a-methyl-N-acetyl-D-glucosamine
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
Y
BNL
1996-06-15
REL
REL
oligosaccharide
oligosaccharide
LFucpa1-2DGalpb1-4[LFucpa1-3]DGlcpNAc[1Me]b1-OME
2
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/3,4,3/[a2122h-1b_1-5_1*OC_2*NCC/3=O][a1221m-1a_1-5][a2112h-1b_1-5]/1-2-3-2/a3-b1_a4-c1_c2-d1
2
PDB2Glycan
1.1.0
WURCS
[][methyl]{[(1+1)][b-D-GlcpNAc]{[(3+1)][a-L-Fucp]{}[(4+1)][b-D-Galp]{[(2+1)][a-L-Fucp]{}}}}
2
PDB-CARE
LINUCS
DManpb1-4DGlcpNAcb1-4[LFucpa1-3]DGlcpNAcb1-
3
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5][a1122h-1b_1-5]/1-2-1-3/a3-b1_a4-c1_c4-d1
3
PDB2Glycan
1.1.0
WURCS
[]{[(4+1)][b-D-GlcpNAc]{[(3+1)][a-L-Fucp]{}[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}}}
3
PDB-CARE
LINUCS
C1
O4
GAL
MAG
2
1
2
O1
HO4
sing
C1
O2
FUC
GAL
3
2
2
O1
HO2
sing
C1
O3
FUC
MAG
4
1
2
O1
HO3
sing
C1
O4
NAG
NAG
2
1
3
O1
HO4
sing
C1
O4
BMA
NAG
3
2
3
O1
HO4
sing
C1
O3
FUC
NAG
4
1
3
O1
HO3
sing
n
n
n
n
n
n
n
n
MN
MANGANESE (II) ION
CA
CALCIUM ION
HOH
water
PEPTIDE BOND VAL 221 - GLY 222 IS A CIS PEPTIDE BOND AND
IS INVOLVED IN CARBOHYDRATE BINDING.
MN
250
4
MN
MN
250
A
CA
251
5
CA
CA
251
A
HOH
301
6
HOH
HOH
301
A
HOH
302
6
HOH
HOH
302
A
HOH
303
6
HOH
HOH
303
A
HOH
304
6
HOH
HOH
304
A
HOH
305
6
HOH
HOH
305
A
HOH
306
6
HOH
HOH
306
A
HOH
307
6
HOH
HOH
307
A
HOH
308
6
HOH
HOH
308
A
HOH
309
6
HOH
HOH
309
A
HOH
310
6
HOH
HOH
310
A
HOH
311
6
HOH
HOH
311
A
HOH
312
6
HOH
HOH
312
A
HOH
313
6
HOH
HOH
313
A
HOH
314
6
HOH
HOH
314
A
HOH
315
6
HOH
HOH
315
A
HOH
316
6
HOH
HOH
316
A
HOH
317
6
HOH
HOH
317
A
HOH
318
6
HOH
HOH
318
A
HOH
319
6
HOH
HOH
319
A
HOH
320
6
HOH
HOH
320
A
HOH
321
6
HOH
HOH
321
A
HOH
322
6
HOH
HOH
322
A
HOH
323
6
HOH
HOH
323
A
HOH
324
6
HOH
HOH
324
A
HOH
325
6
HOH
HOH
325
A
HOH
326
6
HOH
HOH
326
A
HOH
328
6
HOH
HOH
328
A
HOH
329
6
HOH
HOH
329
A
HOH
330
6
HOH
HOH
330
A
HOH
331
6
HOH
HOH
331
A
HOH
332
6
HOH
HOH
332
A
HOH
333
6
HOH
HOH
333
A
HOH
334
6
HOH
HOH
334
A
HOH
335
6
HOH
HOH
335
A
HOH
336
6
HOH
HOH
336
A
HOH
337
6
HOH
HOH
337
A
HOH
338
6
HOH
HOH
338
A
HOH
339
6
HOH
HOH
339
A
HOH
340
6
HOH
HOH
340
A
HOH
341
6
HOH
HOH
341
A
HOH
342
6
HOH
HOH
342
A
HOH
343
6
HOH
HOH
343
A
HOH
344
6
HOH
HOH
344
A
HOH
345
6
HOH
HOH
345
A
HOH
346
6
HOH
HOH
346
A
HOH
347
6
HOH
HOH
347
A
HOH
348
6
HOH
HOH
348
A
HOH
349
6
HOH
HOH
349
A
HOH
350
6
HOH
HOH
350
A
HOH
351
6
HOH
HOH
351
A
HOH
352
6
HOH
HOH
352
A
HOH
353
6
HOH
HOH
353
A
HOH
354
6
HOH
HOH
354
A
HOH
355
6
HOH
HOH
355
A
HOH
356
6
HOH
HOH
356
A
HOH
357
6
HOH
HOH
357
A
HOH
358
6
HOH
HOH
358
A
HOH
359
6
HOH
HOH
359
A
HOH
360
6
HOH
HOH
360
A
HOH
361
6
HOH
HOH
361
A
HOH
362
6
HOH
HOH
362
A
HOH
363
6
HOH
HOH
363
A
HOH
364
6
HOH
HOH
364
A
HOH
365
6
HOH
HOH
365
A
HOH
366
6
HOH
HOH
366
A
HOH
367
6
HOH
HOH
367
A
HOH
368
6
HOH
HOH
368
A
HOH
369
6
HOH
HOH
369
A
HOH
370
6
HOH
HOH
370
A
HOH
371
6
HOH
HOH
371
A
HOH
372
6
HOH
HOH
372
A
HOH
373
6
HOH
HOH
373
A
HOH
374
6
HOH
HOH
374
A
HOH
375
6
HOH
HOH
375
A
HOH
376
6
HOH
HOH
376
A
HOH
377
6
HOH
HOH
377
A
HOH
378
6
HOH
HOH
378
A
HOH
379
6
HOH
HOH
379
A
HOH
380
6
HOH
HOH
380
A
HOH
381
6
HOH
HOH
381
A
HOH
382
6
HOH
HOH
382
A
HOH
383
6
HOH
HOH
383
A
HOH
384
6
HOH
HOH
384
A
HOH
385
6
HOH
HOH
385
A
HOH
387
6
HOH
HOH
387
A
HOH
388
6
HOH
HOH
388
A
HOH
389
6
HOH
HOH
389
A
HOH
390
6
HOH
HOH
390
A
HOH
391
6
HOH
HOH
391
A
HOH
392
6
HOH
HOH
392
A
HOH
393
6
HOH
HOH
393
A
HOH
394
6
HOH
HOH
394
A
HOH
395
6
HOH
HOH
395
A
HOH
396
6
HOH
HOH
396
A
HOH
397
6
HOH
HOH
397
A
HOH
398
6
HOH
HOH
398
A
HOH
399
6
HOH
HOH
399
A
HOH
400
6
HOH
HOH
400
A
HOH
401
6
HOH
HOH
401
A
HOH
402
6
HOH
HOH
402
A
HOH
403
6
HOH
HOH
403
A
HOH
404
6
HOH
HOH
404
A
HOH
405
6
HOH
HOH
405
A
HOH
406
6
HOH
HOH
406
A
HOH
407
6
HOH
HOH
407
A
HOH
408
6
HOH
HOH
408
A
HOH
409
6
HOH
HOH
409
A
HOH
410
6
HOH
HOH
410
A
HOH
411
6
HOH
HOH
411
A
HOH
412
6
HOH
HOH
412
A
HOH
413
6
HOH
HOH
413
A
HOH
415
6
HOH
HOH
415
A
HOH
416
6
HOH
HOH
416
A
HOH
417
6
HOH
HOH
417
A
HOH
419
6
HOH
HOH
419
A
HOH
420
6
HOH
HOH
420
A
HOH
421
6
HOH
HOH
421
A
HOH
422
6
HOH
HOH
422
A
HOH
423
6
HOH
HOH
423
A
HOH
425
6
HOH
HOH
425
A
HOH
426
6
HOH
HOH
426
A
HOH
427
6
HOH
HOH
427
A
HOH
428
6
HOH
HOH
428
A
HOH
429
6
HOH
HOH
429
A
HOH
430
6
HOH
HOH
430
A
HOH
431
6
HOH
HOH
431
A
HOH
432
6
HOH
HOH
432
A
HOH
433
6
HOH
HOH
433
A
HOH
434
6
HOH
HOH
434
A
HOH
435
6
HOH
HOH
435
A
HOH
450
6
HOH
HOH
450
A
HOH
451
6
HOH
HOH
451
A
HOH
452
6
HOH
HOH
452
A
HOH
454
6
HOH
HOH
454
A
HOH
457
6
HOH
HOH
457
A
HOH
458
6
HOH
HOH
458
A
HOH
459
6
HOH
HOH
459
A
HOH
461
6
HOH
HOH
461
A
HOH
462
6
HOH
HOH
462
A
HOH
463
6
HOH
HOH
463
A
HOH
464
6
HOH
HOH
464
A
HOH
465
6
HOH
HOH
465
A
HOH
466
6
HOH
HOH
466
A
HOH
467
6
HOH
HOH
467
A
HOH
468
6
HOH
HOH
468
A
HOH
469
6
HOH
HOH
469
A
HOH
470
6
HOH
HOH
470
A
HOH
471
6
HOH
HOH
471
A
HOH
472
6
HOH
HOH
472
A
HOH
473
6
HOH
HOH
473
A
HOH
474
6
HOH
HOH
474
A
HOH
475
6
HOH
HOH
475
A
HOH
476
6
HOH
HOH
476
A
HOH
477
6
HOH
HOH
477
A
HOH
478
6
HOH
HOH
478
A
HOH
479
6
HOH
HOH
479
A
HOH
480
6
HOH
HOH
480
A
HOH
481
6
HOH
HOH
481
A
HOH
482
6
HOH
HOH
482
A
HOH
483
6
HOH
HOH
483
A
HOH
484
6
HOH
HOH
484
A
HOH
485
6
HOH
HOH
485
A
HOH
486
6
HOH
HOH
486
A
PCA
1
n
1
PCA
1
A
ASN
2
n
2
ASN
2
A
THR
3
n
3
THR
3
A
VAL
4
n
4
VAL
4
A
ASN
5
n
5
ASN
5
A
PHE
6
n
6
PHE
6
A
THR
7
n
7
THR
7
A
TYR
8
n
8
TYR
8
A
PRO
9
n
9
PRO
9
A
ASP
10
n
10
ASP
10
A
PHE
11
n
11
PHE
11
A
TRP
12
n
12
TRP
12
A
SER
13
n
13
SER
13
A
TYR
14
n
14
TYR
14
A
SER
15
n
15
SER
15
A
LEU
16
n
16
LEU
16
A
LYS
17
n
17
LYS
17
A
ASN
18
n
18
ASN
18
A
GLY
19
n
19
GLY
19
A
THR
20
n
20
THR
20
A
GLU
21
n
21
GLU
21
A
ILE
22
n
22
ILE
22
A
THR
23
n
23
THR
23
A
PHE
24
n
24
PHE
24
A
LEU
25
n
25
LEU
25
A
GLY
26
n
26
GLY
26
A
ASP
27
n
27
ASP
27
A
ALA
28
n
28
ALA
28
A
THR
29
n
29
THR
29
A
ARG
30
n
30
ARG
30
A
ILE
31
n
31
ILE
31
A
PRO
32
n
32
PRO
32
A
GLY
33
n
33
GLY
33
A
ALA
34
n
34
ALA
34
A
LEU
35
n
35
LEU
35
A
GLN
36
n
36
GLN
36
A
LEU
37
n
37
LEU
37
A
THR
38
n
38
THR
38
A
LYS
39
n
39
LYS
39
A
THR
40
n
40
THR
40
A
ASP
41
n
41
ASP
41
A
ALA
42
n
42
ALA
42
A
ASN
43
n
43
ASN
43
A
GLY
44
n
44
GLY
44
A
ASN
45
n
45
ASN
45
A
PRO
46
n
46
PRO
46
A
VAL
47
n
47
VAL
47
A
ARG
48
n
48
ARG
48
A
SER
49
n
49
SER
49
A
SER
50
n
50
SER
50
A
ALA
51
n
51
ALA
51
A
GLY
52
n
52
GLY
52
A
GLN
53
n
53
GLN
53
A
ALA
54
n
54
ALA
54
A
SER
55
n
55
SER
55
A
TYR
56
n
56
TYR
56
A
SER
57
n
57
SER
57
A
GLU
58
n
58
GLU
58
A
PRO
59
n
59
PRO
59
A
VAL
60
n
60
VAL
60
A
PHE
61
n
61
PHE
61
A
LEU
62
n
62
LEU
62
A
TRP
63
n
63
TRP
63
A
ASP
64
n
64
ASP
64
A
SER
65
n
65
SER
65
A
THR
66
n
66
THR
66
A
GLY
67
n
67
GLY
67
A
LYS
68
n
68
LYS
68
A
ALA
69
n
69
ALA
69
A
ALA
70
n
70
ALA
70
A
SER
71
n
71
SER
71
A
PHE
72
n
72
PHE
72
A
TYR
73
n
73
TYR
73
A
THR
74
n
74
THR
74
A
SER
75
n
75
SER
75
A
PHE
76
n
76
PHE
76
A
THR
77
n
77
THR
77
A
PHE
78
n
78
PHE
78
A
LEU
79
n
79
LEU
79
A
LEU
80
n
80
LEU
80
A
LYS
81
n
81
LYS
81
A
ASN
82
n
82
ASN
82
A
TYR
83
n
83
TYR
83
A
GLY
84
n
84
GLY
84
A
ALA
85
n
85
ALA
85
A
PRO
86
n
86
PRO
86
A
THR
87
n
87
THR
87
A
ALA
88
n
88
ALA
88
A
ASP
89
n
89
ASP
89
A
GLY
90
n
90
GLY
90
A
LEU
91
n
91
LEU
91
A
ALA
92
n
92
ALA
92
A
PHE
93
n
93
PHE
93
A
PHE
94
n
94
PHE
94
A
LEU
95
n
95
LEU
95
A
ALA
96
n
96
ALA
96
A
PRO
97
n
97
PRO
97
A
VAL
98
n
98
VAL
98
A
ASP
99
n
99
ASP
99
A
SER
100
n
100
SER
100
A
SER
101
n
101
SER
101
A
VAL
102
n
102
VAL
102
A
LYS
103
n
103
LYS
103
A
ASP
104
n
104
ASP
104
A
TYR
105
n
105
TYR
105
A
GLY
106
n
106
GLY
106
A
GLY
107
n
107
GLY
107
A
PHE
108
n
108
PHE
108
A
LEU
109
n
109
LEU
109
A
GLY
110
n
110
GLY
110
A
LEU
111
n
111
LEU
111
A
PHE
112
n
112
PHE
112
A
ARG
113
n
113
ARG
113
A
HIS
114
n
114
HIS
114
A
GLU
115
n
115
GLU
115
A
THR
116
n
116
THR
116
A
ALA
117
n
117
ALA
117
A
ALA
118
n
118
ALA
118
A
ASP
119
n
119
ASP
119
A
PRO
120
n
120
PRO
120
A
SER
121
n
121
SER
121
A
LYS
122
n
122
LYS
122
A
ASN
123
n
123
ASN
123
A
GLN
124
n
124
GLN
124
A
VAL
125
n
125
VAL
125
A
VAL
126
n
126
VAL
126
A
ALA
127
n
127
ALA
127
A
VAL
128
n
128
VAL
128
A
GLU
129
n
129
GLU
129
A
PHE
130
n
130
PHE
130
A
ASP
131
n
131
ASP
131
A
THR
132
n
132
THR
132
A
TRP
133
n
133
TRP
133
A
ILE
134
n
134
ILE
134
A
ASN
135
n
135
ASN
135
A
LYS
136
n
136
LYS
136
A
ASP
137
n
137
ASP
137
A
TRP
138
n
138
TRP
138
A
ASN
139
n
139
ASN
139
A
ASP
140
n
140
ASP
140
A
PRO
141
n
141
PRO
141
A
PRO
142
n
142
PRO
142
A
TYR
143
n
143
TYR
143
A
PRO
144
n
144
PRO
144
A
HIS
145
n
145
HIS
145
A
ILE
146
n
146
ILE
146
A
GLY
147
n
147
GLY
147
A
ILE
148
n
148
ILE
148
A
ASP
149
n
149
ASP
149
A
VAL
150
n
150
VAL
150
A
ASN
151
n
151
ASN
151
A
SER
152
n
152
SER
152
A
ILE
153
n
153
ILE
153
A
VAL
154
n
154
VAL
154
A
SER
155
n
155
SER
155
A
VAL
156
n
156
VAL
156
A
ALA
157
n
157
ALA
157
A
THR
158
n
158
THR
158
A
THR
159
n
159
THR
159
A
ARG
160
n
160
ARG
160
A
TRP
161
n
161
TRP
161
A
GLU
162
n
162
GLU
162
A
ASN
163
n
163
ASN
163
A
ASP
164
n
164
ASP
164
A
ASP
165
n
165
ASP
165
A
ALA
166
n
166
ALA
166
A
TYR
167
n
167
TYR
167
A
GLY
168
n
168
GLY
168
A
SER
169
n
169
SER
169
A
SER
170
n
170
SER
170
A
ILE
171
n
171
ILE
171
A
ALA
172
n
172
ALA
172
A
THR
173
n
173
THR
173
A
ALA
174
n
174
ALA
174
A
HIS
175
n
175
HIS
175
A
ILE
176
n
176
ILE
176
A
THR
177
n
177
THR
177
A
TYR
178
n
178
TYR
178
A
ASP
179
n
179
ASP
179
A
ALA
180
n
180
ALA
180
A
ARG
181
n
181
ARG
181
A
SER
182
n
182
SER
182
A
LYS
183
n
183
LYS
183
A
ILE
184
n
184
ILE
184
A
LEU
185
n
185
LEU
185
A
THR
186
n
186
THR
186
A
VAL
187
n
187
VAL
187
A
LEU
188
n
188
LEU
188
A
LEU
189
n
189
LEU
189
A
SER
190
n
190
SER
190
A
TYR
191
n
191
TYR
191
A
GLU
192
n
192
GLU
192
A
HIS
193
n
193
HIS
193
A
GLY
194
n
194
GLY
194
A
ARG
195
n
195
ARG
195
A
ASP
196
n
196
ASP
196
A
TYR
197
n
197
TYR
197
A
ILE
198
n
198
ILE
198
A
LEU
199
n
199
LEU
199
A
SER
200
n
200
SER
200
A
HIS
201
n
201
HIS
201
A
VAL
202
n
202
VAL
202
A
VAL
203
n
203
VAL
203
A
ASP
204
n
204
ASP
204
A
LEU
205
n
205
LEU
205
A
ALA
206
n
206
ALA
206
A
LYS
207
n
207
LYS
207
A
VAL
208
n
208
VAL
208
A
LEU
209
n
209
LEU
209
A
PRO
210
n
210
PRO
210
A
GLN
211
n
211
GLN
211
A
LYS
212
n
212
LYS
212
A
VAL
213
n
213
VAL
213
A
ARG
214
n
214
ARG
214
A
ILE
215
n
215
ILE
215
A
GLY
216
n
216
GLY
216
A
PHE
217
n
217
PHE
217
A
SER
218
n
218
SER
218
A
ALA
219
n
219
ALA
219
A
GLY
220
n
220
GLY
220
A
VAL
221
n
221
VAL
221
A
GLY
222
n
222
GLY
222
A
TYR
223
n
223
TYR
223
A
ASP
224
n
224
ASP
224
A
GLU
225
n
225
GLU
225
A
VAL
226
n
226
VAL
226
A
THR
227
n
227
THR
227
A
TYR
228
n
228
TYR
228
A
ILE
229
n
229
ILE
229
A
LEU
230
n
230
LEU
230
A
SER
231
n
231
SER
231
A
TRP
232
n
232
TRP
232
A
HIS
233
n
233
HIS
233
A
PHE
234
n
234
PHE
234
A
PHE
235
n
235
PHE
235
A
SER
236
n
236
SER
236
A
THR
237
n
237
THR
237
A
LEU
238
n
238
LEU
238
A
ASP
239
n
239
ASP
239
A
GLY
240
n
240
GLY
240
A
THR
241
n
241
THR
241
A
ASN
242
n
242
ASN
242
A
LYS
243
n
243
LYS
243
A
author_defined_assembly
2
dimeric
A
GLU
129
A
OE2
GLU
129
1_555
A
MN
250
D
MN
MN
1_555
A
ASP
131
A
OD2
ASP
131
1_555
92.4
A
GLU
129
A
OE2
GLU
129
1_555
A
MN
250
D
MN
MN
1_555
A
ASP
140
A
OD1
ASP
140
1_555
166.4
A
ASP
131
A
OD2
ASP
131
1_555
A
MN
250
D
MN
MN
1_555
A
ASP
140
A
OD1
ASP
140
1_555
96.5
A
GLU
129
A
OE2
GLU
129
1_555
A
MN
250
D
MN
MN
1_555
A
HIS
145
A
NE2
HIS
145
1_555
93.4
A
ASP
131
A
OD2
ASP
131
1_555
A
MN
250
D
MN
MN
1_555
A
HIS
145
A
NE2
HIS
145
1_555
86.9
A
ASP
140
A
OD1
ASP
140
1_555
A
MN
250
D
MN
MN
1_555
A
HIS
145
A
NE2
HIS
145
1_555
97.3
A
GLU
129
A
OE2
GLU
129
1_555
A
MN
250
D
MN
MN
1_555
A
HOH
305
F
O
HOH
1_555
89.3
A
ASP
131
A
OD2
ASP
131
1_555
A
MN
250
D
MN
MN
1_555
A
HOH
305
F
O
HOH
1_555
178.3
A
ASP
140
A
OD1
ASP
140
1_555
A
MN
250
D
MN
MN
1_555
A
HOH
305
F
O
HOH
1_555
81.9
A
HIS
145
A
NE2
HIS
145
1_555
A
MN
250
D
MN
MN
1_555
A
HOH
305
F
O
HOH
1_555
92.7
A
GLU
129
A
OE2
GLU
129
1_555
A
MN
250
D
MN
MN
1_555
A
HOH
332
F
O
HOH
1_555
85.5
A
ASP
131
A
OD2
ASP
131
1_555
A
MN
250
D
MN
MN
1_555
A
HOH
332
F
O
HOH
1_555
93.4
A
ASP
140
A
OD1
ASP
140
1_555
A
MN
250
D
MN
MN
1_555
A
HOH
332
F
O
HOH
1_555
83.8
A
HIS
145
A
NE2
HIS
145
1_555
A
MN
250
D
MN
MN
1_555
A
HOH
332
F
O
HOH
1_555
178.8
A
HOH
305
F
O
HOH
1_555
A
MN
250
D
MN
MN
1_555
A
HOH
332
F
O
HOH
1_555
87.1
A
ASP
131
A
OD1
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
A
ASP
131
A
OD2
ASP
131
1_555
50.8
A
ASP
131
A
OD1
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
A
TRP
133
A
O
TRP
133
1_555
82.1
A
ASP
131
A
OD2
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
A
TRP
133
A
O
TRP
133
1_555
110.6
A
ASP
131
A
OD1
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
A
ASN
135
A
OD1
ASN
135
1_555
153.3
A
ASP
131
A
OD2
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
A
ASN
135
A
OD1
ASN
135
1_555
155.9
A
TRP
133
A
O
TRP
133
1_555
A
CA
251
E
CA
CA
1_555
A
ASN
135
A
OD1
ASN
135
1_555
81.6
A
ASP
131
A
OD1
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
A
ASP
140
A
OD2
ASP
140
1_555
110.5
A
ASP
131
A
OD2
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
A
ASP
140
A
OD2
ASP
140
1_555
78.9
A
TRP
133
A
O
TRP
133
1_555
A
CA
251
E
CA
CA
1_555
A
ASP
140
A
OD2
ASP
140
1_555
74.1
A
ASN
135
A
OD1
ASN
135
1_555
A
CA
251
E
CA
CA
1_555
A
ASP
140
A
OD2
ASP
140
1_555
84.9
A
ASP
131
A
OD1
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
A
HOH
329
F
O
HOH
1_555
73.7
A
ASP
131
A
OD2
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
A
HOH
329
F
O
HOH
1_555
112.6
A
TRP
133
A
O
TRP
133
1_555
A
CA
251
E
CA
CA
1_555
A
HOH
329
F
O
HOH
1_555
93.6
A
ASN
135
A
OD1
ASN
135
1_555
A
CA
251
E
CA
CA
1_555
A
HOH
329
F
O
HOH
1_555
86.4
A
ASP
140
A
OD2
ASP
140
1_555
A
CA
251
E
CA
CA
1_555
A
HOH
329
F
O
HOH
1_555
165.9
A
ASP
131
A
OD1
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
A
HOH
333
F
O
HOH
1_555
109.1
A
ASP
131
A
OD2
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
A
HOH
333
F
O
HOH
1_555
77.4
A
TRP
133
A
O
TRP
133
1_555
A
CA
251
E
CA
CA
1_555
A
HOH
333
F
O
HOH
1_555
168.8
A
ASN
135
A
OD1
ASN
135
1_555
A
CA
251
E
CA
CA
1_555
A
HOH
333
F
O
HOH
1_555
88.2
A
ASP
140
A
OD2
ASP
140
1_555
A
CA
251
E
CA
CA
1_555
A
HOH
333
F
O
HOH
1_555
100.6
A
HOH
329
F
O
HOH
1_555
A
CA
251
E
CA
CA
1_555
A
HOH
333
F
O
HOH
1_555
90.3
A
ASN
18
GLYCOSYLATION SITE
A
ASN
18
ASN
A
PCA
1
PYROGLUTAMIC ACID
A
PCA
1
GLN
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
7_555
y,x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
O
PHE
6
A
O
PHE
6
A
N
PHE
234
A
N
PHE
234
A
O
VAL
226
A
O
VAL
226
A
N
LYS
81
A
N
LYS
81
A
O
PHE
72
A
O
PHE
72
A
N
TYR
178
A
N
TYR
178
A
O
THR
173
A
O
THR
173
A
N
SER
190
A
N
SER
190
A
O
LEU
185
A
O
LEU
185
A
N
HIS
201
A
N
HIS
201
A
O
THR
23
A
O
THR
23
A
N
SER
55
A
N
SER
55
A
O
SER
50
A
O
SER
50
A
N
VAL
221
A
N
VAL
221
A
O
ARG
214
A
O
ARG
214
A
N
ALA
96
A
N
ALA
96
A
O
LEU
91
A
O
LEU
91
A
N
PHE
130
A
N
PHE
130
A
O
ALA
127
A
O
ALA
127
A
N
ASP
149
A
N
ASP
149
A
O
ILE
146
A
O
ILE
146
A
N
THR
159
A
N
THR
159
A
O
THR
29
A
O
THR
29
A
N
GLN
36
A
N
GLN
36
1
A
HOH
403
F
HOH
1
A
HOH
404
F
HOH
1
A
CG
PCA
1
A
CG
PCA
1
1
Y
1
A
CD
PCA
1
A
CD
PCA
1
1
Y
1
A
OE
PCA
1
A
OE
PCA
1
1
Y
1
A
CG
ASN
242
A
CG
ASN
242
1
Y
1
A
OD1
ASN
242
A
OD1
ASN
242
1
Y
1
A
ND2
ASN
242
A
ND2
ASN
242
1
Y
1
A
CG
LYS
243
A
CG
LYS
243
1
Y
1
A
CD
LYS
243
A
CD
LYS
243
1
Y
1
A
CE
LYS
243
A
CE
LYS
243
1
Y
1
A
NZ
LYS
243
A
NZ
LYS
243
1
Y
1
A
SER
13
-100.65
74.71
1
A
SER
49
44.67
73.87
1
A
LYS
103
-111.64
-145.70
1
A
PRO
142
-69.87
44.18
1
A
ASN
242
70.55
-23.42
31.29
RESIDUES 1 AND 241 - 243 HAVE VERY HIGH TEMPERATURE
FACTORS AND ARE NOT WELL DETERMINED.
0.242
0.1854
0.1854
2.0
40.
16581
1
0.
2.0
40.
163
2154
98
0
1893
0.010
1.835
1GSL
16584
0.049
1
3.7
83.7
model building
X-PLOR
refinement
X-PLOR
data reduction
MADNES
data reduction
PROCOR
phasing
X-PLOR
GRIFFONIA SIMPLICIFOLIA LECTIN 4
LECTIN (FOURTH ISOLATED FROM (GRIFFONIA SIMPLICIFOLIA)) COMPLEX WITH Y HUMAN BLOOD GROUP DETERMINANT
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
6
N
N
A
GLY
106
A
GLY
106
HELX_P
A
PHE
108
A
PHE
108
5
1
3
A
PRO
120
A
PRO
120
HELX_P
A
LYS
122
A
LYS
122
5
2
3
A
LYS
136
A
LYS
136
HELX_P
A
TRP
138
A
TRP
138
5
3
3
A
ASN
163
A
ASN
163
HELX_P
A
ALA
166
A
ALA
166
1
4
4
A
LEU
205
A
LEU
205
HELX_P
A
VAL
208
A
VAL
208
1
5
4
covale
1.337
both
A
PCA
1
A
C
PCA
1
1_555
A
ASN
2
A
N
ASN
2
1_555
covale
1.460
one
N-Glycosylation
A
ASN
18
A
ND2
ASN
18
1_555
C
NAG
1
C
C1
NAG
1_555
covale
1.397
both
B
MAG
1
B
O4
MAG
1_555
B
GAL
2
B
C1
GAL
1_555
covale
1.403
both
B
MAG
1
B
O3
MAG
1_555
B
FUC
4
B
C1
FUC
1_555
covale
1.400
both
B
GAL
2
B
O2
GAL
1_555
B
FUC
3
B
C1
FUC
1_555
covale
1.390
both
C
NAG
1
C
O4
NAG
1_555
C
NAG
2
C
C1
NAG
1_555
covale
1.393
both
C
NAG
1
C
O3
NAG
1_555
C
FUC
4
C
C1
FUC
1_555
covale
1.384
both
C
NAG
2
C
O4
NAG
1_555
C
BMA
3
C
C1
BMA
1_555
metalc
2.256
A
GLU
129
A
OE2
GLU
129
1_555
A
MN
250
D
MN
MN
1_555
metalc
2.014
A
ASP
131
A
OD2
ASP
131
1_555
A
MN
250
D
MN
MN
1_555
metalc
2.387
A
ASP
131
A
OD1
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
metalc
2.652
A
ASP
131
A
OD2
ASP
131
1_555
A
CA
251
E
CA
CA
1_555
metalc
2.287
A
TRP
133
A
O
TRP
133
1_555
A
CA
251
E
CA
CA
1_555
metalc
2.299
A
ASN
135
A
OD1
ASN
135
1_555
A
CA
251
E
CA
CA
1_555
metalc
2.376
A
ASP
140
A
OD1
ASP
140
1_555
A
MN
250
D
MN
MN
1_555
metalc
2.298
A
ASP
140
A
OD2
ASP
140
1_555
A
CA
251
E
CA
CA
1_555
metalc
2.218
A
HIS
145
A
NE2
HIS
145
1_555
A
MN
250
D
MN
MN
1_555
metalc
2.101
A
MN
250
D
MN
MN
1_555
A
HOH
305
F
O
HOH
1_555
metalc
2.284
A
MN
250
D
MN
MN
1_555
A
HOH
332
F
O
HOH
1_555
metalc
2.268
A
CA
251
E
CA
CA
1_555
A
HOH
329
F
O
HOH
1_555
metalc
2.470
A
CA
251
E
CA
CA
1_555
A
HOH
333
F
O
HOH
1_555
LECTIN
GLYCOPROTEIN, LECTIN, MANGANESE
A
ALA
85
A
ALA
85
1
A
PRO
86
A
PRO
86
-0.25
A
ALA
88
A
ALA
88
1
A
ASP
89
A
ASP
89
0.40
A
VAL
221
A
VAL
221
1
A
GLY
222
A
GLY
222
0.36
LEC4_GRISI
UNP
1
1
P24146
QNTVNFTYPDFWSYSLKNGTEITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVFLWDSTGKAASFYTSFTFLL
KNYGAPTADGLAFFLAPVDSSVKDYGGFLGLFRHETAADPSKNQVVAVEFDTWINKDWNDPPYPHIGIDVNSIVSVATTR
WENDDAYGSSIATAHITYDARSKILTVLLSYEHGRDYILSHVVDLAKVLPQKVRIGFSAGVGYDEVTYILSWHFFSTLDG
TNK
2
243
1GSL
2
243
P24146
A
1
2
243
6
7
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ASN
5
A
ASN
5
A
TYR
8
A
TYR
8
A
GLU
225
A
GLU
225
A
THR
237
A
THR
237
A
SER
71
A
SER
71
A
ASN
82
A
ASN
82
A
ILE
171
A
ILE
171
A
ASP
179
A
ASP
179
A
ILE
184
A
ILE
184
A
TYR
191
A
TYR
191
A
ASP
196
A
ASP
196
A
VAL
202
A
VAL
202
A
ILE
22
A
ILE
22
A
GLY
26
A
GLY
26
A
SER
50
A
SER
50
A
TYR
56
A
TYR
56
A
VAL
213
A
VAL
213
A
VAL
221
A
VAL
221
A
GLY
90
A
GLY
90
A
PRO
97
A
PRO
97
A
VAL
125
A
VAL
125
A
ASP
131
A
ASP
131
A
HIS
145
A
HIS
145
A
VAL
150
A
VAL
150
A
ALA
157
A
ALA
157
A
ARG
160
A
ARG
160
A
THR
29
A
THR
29
A
ILE
31
A
ILE
31
A
ALA
34
A
ALA
34
A
GLN
36
A
GLN
36
94
P 42 21 2