1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Nielsen, K.M.E.
Petersen, M.
Haakansson, A.E.
Wengel, J.
Jacobsen, J.P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
90.00
90.00
1.000
1.000
1.000
C11 H15 N2 O9 P
350.219
n
[(1S,3R,4S,7R)-7-HYDROXY-3-(THYMIN-1-YL)-2,5-DIOXABICYCLO[2.2.1]HEPT-1-YL]METHYL DIHYDROGEN PHOSPHATE
RNA linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
GE
Chemistry
0947-6539
8
3001
10.1002/1521-3765(20020703)8:13<3001::AID-CHEM3001>3.0.CO;2-1
12489231
Alfa-L-Lna (Alfa-L-Ribo Configured Locked Nucleic Acid) Recognition of DNA: An NMR Spectroscopic Study
2002
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
ATL IS ALFA-L-LNA (ALFA-L-RIBO CONFIGURED LOCKED NUCLEIC ACID OR [ (1S, 3R, 4S, 7R)-7-HYDROXY-3-(THYMIN-1-YL)-2,5-DIOXABICYCLO[2. 2.1]HEPT-1-YL]METHYL DIHYDROGEN PHOSPHATE
3098.997
5- D(*CP*(ATL)P*GP*CP*(ATL)P*(ATL)P*CP*(ATL)P* GP*C) -3
1
syn
polymer
3103.057
5- D(*GP*CP*AP*GP*AP*AP*GP*CP*AP*G) -3
1
syn
polymer
no
yes
(DC)(ATL)(DG)(DC)(ATL)(ATL)(DC)(ATL)(DG)(DC)
CTGCTTCTGC
A
polydeoxyribonucleotide/polyribonucleotide hybrid
no
no
(DG)(DC)(DA)(DG)(DA)(DA)(DG)(DC)(DA)(DG)
GCAGAAGCAG
B
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
-9.174
1
19
A
1
B
20
-2.513
A_DC1:DG20_B
1
4.655
0.407
-0.033
0.017
-0.956
1
20
A
2
B
19
2.744
A_ATL2:DA19_B
2
-0.892
-0.348
-0.729
0.022
-13.163
1
19
A
3
B
18
-1.310
A_DG3:DC18_B
3
9.786
-0.627
-0.448
-0.120
-5.547
1
19
A
4
B
17
-0.002
A_DC4:DG17_B
4
0.602
0.208
-0.144
0.076
-14.172
1
20
A
5
B
16
-0.592
A_ATL5:DA16_B
5
-9.912
-0.248
0.055
0.099
-20.248
1
20
A
6
B
15
-5.662
A_ATL6:DA15_B
6
-6.029
0.683
0.946
-0.212
-2.775
1
19
A
7
B
14
-1.797
A_DC7:DG14_B
7
-23.004
-0.022
0.242
0.102
-9.289
1
20
A
8
B
13
-4.887
A_ATL8:DA13_B
8
-11.503
0.186
0.737
-0.058
-1.612
1
19
A
9
B
12
-2.382
A_DG9:DC12_B
9
-32.511
-0.517
0.508
-0.160
-5.194
1
19
A
10
B
11
-3.125
A_DC10:DG11_B
10
-13.375
0.978
0.074
-0.232
3.553
25.522
A
A
1
2
-4.301
B
B
20
19
3.533
-1.898
1.196
-0.931
AA_DC1ATL2:DA19DG20_BB
1
-0.795
1.801
25.440
-1.520
-2.953
4.580
47.031
A
A
2
3
-41.369
B
B
19
18
5.054
-30.562
-0.100
-1.053
AA_ATL2DG3:DC18DA19_BB
2
2.559
-3.463
36.094
2.948
0.483
3.141
35.415
A
A
3
4
6.293
B
B
18
17
3.261
3.821
-0.175
-0.998
AA_DG3DC4:DG17DC18_BB
3
-0.672
1.106
35.209
-2.192
0.190
3.314
24.553
A
A
4
5
5.718
B
B
17
16
3.456
2.427
0.255
-1.371
AA_DC4ATL5:DA16DG17_BB
4
1.105
-2.603
24.410
-4.002
-0.246
3.607
35.557
A
A
5
6
-1.792
B
B
16
15
3.582
-1.092
-0.086
-1.290
AA_ATL5ATL6:DA15DA16_BB
5
-3.891
6.384
35.334
-1.936
-0.484
2.546
33.799
A
A
6
7
-11.430
B
B
15
14
2.991
-6.464
-0.321
0.470
AA_ATL6DC7:DG14DA15_BB
6
12.111
-21.416
30.960
1.734
2.287
3.396
34.104
A
A
7
8
-3.040
B
B
14
13
3.484
-1.780
0.813
-0.141
AA_DC7ATL8:DA13DG14_BB
7
-3.254
5.558
33.907
0.058
-1.931
2.906
35.363
A
A
8
9
-14.727
B
B
13
12
3.284
-8.829
-0.606
0.684
AA_ATL8DG9:DC12DA13_BB
8
4.958
-8.270
33.927
2.385
1.705
3.604
47.101
A
A
9
10
-3.072
B
B
12
11
3.682
-2.454
0.660
1.002
AA_DG9DC10:DG11DC12_BB
9
-1.663
2.083
47.013
1.478
-0.978
repository
Initial release
Version format compliance
Version format compliance
1
0
2002-07-05
1
1
2011-05-08
1
2
2011-07-13
PDBE
Y
PDBE
2002-02-06
REL
MODRES: 1GV6 ATL A 2() ALFA-L-LNA
(ALFA-L-RIBO CONFIGURED LOCKED NUCLEIC ACID OR [
(1S,3R,4S,7R)-7-HYDROXY-3-(THYMIN-1-YL)-2,5-DIOXABICYCLO
[2.2.1]HEPT-1-YL]METHYL DIHYDROGEN PHOSPHATE
MODRES: 1GV6 ATL A 5() ALFA-L-LNA
(ALFA-L-RIBO CONFIGURED LOCKED NUCLEIC ACID OR [
(1S,3R,4S,7R)-7-HYDROXY-3-(THYMIN-1-YL)-2,5-DIOXABICYCLO
[2.2.1]HEPT-1-YL]METHYL DIHYDROGEN PHOSPHATE
MODRES: 1GV6 ATL A 6() ALFA-L-LNA
(ALFA-L-RIBO CONFIGURED LOCKED NUCLEIC ACID OR [
(1S,3R,4S,7R)-7-HYDROXY-3-(THYMIN-1-YL)-2,5-DIOXABICYCLO
[2.2.1]HEPT-1-YL]METHYL DIHYDROGEN PHOSPHATE
MODRES: 1GV6 ATL A 8() ALFA-L-LNA
(ALFA-L-RIBO CONFIGURED LOCKED NUCLEIC ACID OR [
(1S,3R,4S,7R)-7-HYDROXY-3-(THYMIN-1-YL)-2,5-DIOXABICYCLO
[2.2.1]HEPT-1-YL]METHYL DIHYDROGEN PHOSPHATE
THE STRUCTURE WAS DETERMINED USING 1H,1H- NOES FROM 100MS NOESY AND WATERGATE NOESY EXPERIMENTS. SUGAR TORSION RESTRAINTS WERE DERIVED BY ANALYSIS OF A DQF-COSY SPECTRUM
20
20
NOESY
DQF-COSY
TOCSY
0.01
M
7.0
pH
1
atm
298
K
REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE.
simulated annealing
12
CASE, DA, KOLLMAN, PA, ET AL.
refinement
AMBER5
structure solution
FELIX
structure solution
MARDIGRAS
structure solution
AMBER5
500
Varian
UNITY
DC
1
n
1
DC
1
A
ATL
2
n
2
ATL
2
A
DG
3
n
3
DG
3
A
DC
4
n
4
DC
4
A
ATL
5
n
5
ATL
5
A
ATL
6
n
6
ATL
6
A
DC
7
n
7
DC
7
A
ATL
8
n
8
ATL
8
A
DG
9
n
9
DG
9
A
DC
10
n
10
DC
10
A
DG
11
n
1
DG
11
B
DC
12
n
2
DC
12
B
DA
13
n
3
DA
13
B
DG
14
n
4
DG
14
B
DA
15
n
5
DA
15
B
DA
16
n
6
DA
16
B
DG
17
n
7
DG
17
B
DC
18
n
8
DC
18
B
DA
19
n
9
DA
19
B
DG
20
n
10
DG
20
B
author_defined_assembly
2
dimeric
A
ATL
2
A
ATL
2
DT
A
ATL
5
A
ATL
5
DT
A
ATL
6
A
ATL
6
DT
A
ATL
8
A
ATL
8
DT
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
DG
9
0.182
SIDE CHAIN
1
B
DG
14
0.058
SIDE CHAIN
2
A
DG
9
0.198
SIDE CHAIN
2
B
DG
14
0.077
SIDE CHAIN
3
A
DC
7
0.070
SIDE CHAIN
3
A
DG
9
0.173
SIDE CHAIN
3
B
DG
14
0.064
SIDE CHAIN
4
A
DG
9
0.167
SIDE CHAIN
4
B
DG
14
0.065
SIDE CHAIN
5
A
DG
9
0.174
SIDE CHAIN
5
B
DG
14
0.062
SIDE CHAIN
6
A
DC
7
0.064
SIDE CHAIN
6
A
DG
9
0.182
SIDE CHAIN
6
B
DG
14
0.061
SIDE CHAIN
6
B
DG
17
0.059
SIDE CHAIN
7
A
DG
9
0.139
SIDE CHAIN
7
B
DG
14
0.053
SIDE CHAIN
8
A
DC
7
0.070
SIDE CHAIN
8
A
DG
9
0.178
SIDE CHAIN
8
B
DG
14
0.064
SIDE CHAIN
9
A
DC
7
0.124
SIDE CHAIN
9
A
DG
9
0.116
SIDE CHAIN
9
B
DG
11
0.080
SIDE CHAIN
9
B
DC
12
0.075
SIDE CHAIN
9
B
DG
14
0.065
SIDE CHAIN
10
A
DC
7
0.081
SIDE CHAIN
10
A
DG
9
0.154
SIDE CHAIN
10
B
DG
14
0.069
SIDE CHAIN
11
A
DG
9
0.177
SIDE CHAIN
11
B
DG
17
0.062
SIDE CHAIN
12
A
DC
7
0.070
SIDE CHAIN
12
A
DG
9
0.175
SIDE CHAIN
12
B
DG
14
0.058
SIDE CHAIN
13
A
DG
9
0.176
SIDE CHAIN
13
B
DG
14
0.067
SIDE CHAIN
14
A
DG
9
0.167
SIDE CHAIN
14
B
DG
14
0.068
SIDE CHAIN
15
A
DG
9
0.218
SIDE CHAIN
15
B
DG
14
0.065
SIDE CHAIN
16
A
DG
9
0.184
SIDE CHAIN
16
B
DG
14
0.060
SIDE CHAIN
16
B
DG
17
0.060
SIDE CHAIN
17
A
DC
7
0.078
SIDE CHAIN
17
A
DG
9
0.174
SIDE CHAIN
17
B
DG
14
0.060
SIDE CHAIN
18
A
DG
9
0.158
SIDE CHAIN
18
B
DG
14
0.064
SIDE CHAIN
19
A
DC
7
0.073
SIDE CHAIN
19
A
DG
9
0.175
SIDE CHAIN
19
B
DG
14
0.065
SIDE CHAIN
19
B
DG
17
0.057
SIDE CHAIN
20
A
DC
7
0.064
SIDE CHAIN
20
A
DG
9
0.172
SIDE CHAIN
20
B
DG
14
0.063
SIDE CHAIN
1
1.82
0.30
108.30
110.12
A
A
A
O4'
C1'
N9
DG
DG
DG
3
3
3
N
1
4.99
0.30
108.30
113.29
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
1
4.05
0.30
108.30
112.35
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
1
3.68
0.30
108.30
111.98
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
1
6.40
0.60
106.00
112.40
B
B
B
O4'
C4'
C3'
DA
DA
DA
13
13
13
N
1
4.43
0.30
108.30
112.73
B
B
B
O4'
C1'
N9
DA
DA
DA
13
13
13
N
1
5.30
0.60
106.00
111.30
B
B
B
O4'
C4'
C3'
DA
DA
DA
15
15
15
N
1
-5.05
0.70
102.20
97.15
B
B
B
C4'
C3'
C2'
DA
DA
DA
15
15
15
N
1
5.59
0.30
108.30
113.89
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
1
2.58
0.30
108.30
110.88
B
B
B
O4'
C1'
N9
DG
DG
DG
17
17
17
N
1
3.04
0.30
108.30
111.34
B
B
B
O4'
C1'
N1
DC
DC
DC
18
18
18
N
1
3.35
0.50
106.80
110.15
B
B
B
O4'
C1'
C2'
DA
DA
DA
19
19
19
N
1
2.04
0.30
108.30
110.34
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
2
2.19
0.30
108.30
110.49
A
A
A
O4'
C1'
N9
DG
DG
DG
3
3
3
N
2
5.20
0.30
108.30
113.50
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
2
4.02
0.30
108.30
112.32
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
2
2.00
0.30
108.30
110.30
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
2
6.10
0.30
108.30
114.40
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
2
6.24
0.60
106.00
112.24
B
B
B
O4'
C4'
C3'
DA
DA
DA
13
13
13
N
2
5.52
0.30
108.30
113.82
B
B
B
O4'
C1'
N9
DA
DA
DA
13
13
13
N
2
7.32
1.20
119.70
127.02
B
B
B
C3'
O3'
P
DA
DA
DG
13
13
14
Y
2
1.93
0.30
108.30
110.23
B
B
B
O4'
C1'
N9
DG
DG
DG
14
14
14
N
2
5.00
0.60
106.00
111.00
B
B
B
O4'
C4'
C3'
DA
DA
DA
15
15
15
N
2
-4.72
0.70
102.20
97.48
B
B
B
C4'
C3'
C2'
DA
DA
DA
15
15
15
N
2
5.61
0.30
108.30
113.91
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
2
2.82
0.30
108.30
111.12
B
B
B
O4'
C1'
N9
DG
DG
DG
17
17
17
N
2
2.70
0.30
108.30
111.00
B
B
B
O4'
C1'
N1
DC
DC
DC
18
18
18
N
2
2.49
0.30
108.30
110.79
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
2
3.89
0.30
108.30
112.19
B
B
B
O4'
C1'
N9
DG
DG
DG
20
20
20
N
3
1.81
0.30
108.30
110.11
A
A
A
O4'
C1'
N9
DG
DG
DG
3
3
3
N
3
5.24
0.30
108.30
113.54
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
3
3.77
0.30
108.30
112.07
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
3
1.95
0.30
108.30
110.25
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
3
6.15
0.30
108.30
114.45
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
3
6.33
0.60
106.00
112.33
B
B
B
O4'
C4'
C3'
DA
DA
DA
13
13
13
N
3
3.86
0.30
108.30
112.16
B
B
B
O4'
C1'
N9
DA
DA
DA
13
13
13
N
3
5.18
0.60
106.00
111.18
B
B
B
O4'
C4'
C3'
DA
DA
DA
15
15
15
N
3
-5.03
0.70
102.20
97.17
B
B
B
C4'
C3'
C2'
DA
DA
DA
15
15
15
N
3
5.41
0.30
108.30
113.71
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
3
2.38
0.30
108.30
110.68
B
B
B
O4'
C1'
N9
DG
DG
DG
17
17
17
N
3
3.06
0.30
108.30
111.36
B
B
B
O4'
C1'
N1
DC
DC
DC
18
18
18
N
3
3.19
0.50
106.80
109.99
B
B
B
O4'
C1'
C2'
DA
DA
DA
19
19
19
N
3
2.18
0.30
108.30
110.48
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
3
2.82
0.30
108.30
111.12
B
B
B
O4'
C1'
N9
DG
DG
DG
20
20
20
N
4
2.11
0.30
108.30
110.41
A
A
A
O4'
C1'
N9
DG
DG
DG
3
3
3
N
4
5.02
0.30
108.30
113.32
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
4
4.05
0.30
108.30
112.35
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
4
1.85
0.30
108.30
110.15
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
4
5.13
0.30
108.30
113.43
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
4
6.47
0.60
106.00
112.47
B
B
B
O4'
C4'
C3'
DA
DA
DA
13
13
13
N
4
4.13
0.30
108.30
112.43
B
B
B
O4'
C1'
N9
DA
DA
DA
13
13
13
N
4
5.20
0.60
106.00
111.20
B
B
B
O4'
C4'
C3'
DA
DA
DA
15
15
15
N
4
-4.80
0.70
102.20
97.40
B
B
B
C4'
C3'
C2'
DA
DA
DA
15
15
15
N
4
5.69
0.30
108.30
113.99
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
4
2.68
0.30
108.30
110.98
B
B
B
O4'
C1'
N9
DG
DG
DG
17
17
17
N
4
2.87
0.30
108.30
111.17
B
B
B
O4'
C1'
N1
DC
DC
DC
18
18
18
N
4
3.33
0.50
106.80
110.13
B
B
B
O4'
C1'
C2'
DA
DA
DA
19
19
19
N
4
2.31
0.30
108.30
110.61
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
4
2.48
0.30
108.30
110.78
B
B
B
O4'
C1'
N9
DG
DG
DG
20
20
20
N
5
2.26
0.30
108.30
110.56
A
A
A
O4'
C1'
N9
DG
DG
DG
3
3
3
N
5
4.85
0.30
108.30
113.15
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
5
4.25
0.30
108.30
112.55
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
5
1.87
0.30
108.30
110.17
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
5
4.44
0.30
108.30
112.74
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
5
6.22
0.60
106.00
112.22
B
B
B
O4'
C4'
C3'
DA
DA
DA
13
13
13
N
5
4.49
0.30
108.30
112.79
B
B
B
O4'
C1'
N9
DA
DA
DA
13
13
13
N
5
5.23
0.60
106.00
111.23
B
B
B
O4'
C4'
C3'
DA
DA
DA
15
15
15
N
5
-5.05
0.70
102.20
97.15
B
B
B
C4'
C3'
C2'
DA
DA
DA
15
15
15
N
5
5.31
0.30
108.30
113.61
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
5
3.18
0.30
108.30
111.48
B
B
B
O4'
C1'
N9
DG
DG
DG
17
17
17
N
5
2.86
0.30
108.30
111.16
B
B
B
O4'
C1'
N1
DC
DC
DC
18
18
18
N
5
3.18
0.50
106.80
109.98
B
B
B
O4'
C1'
C2'
DA
DA
DA
19
19
19
N
5
2.48
0.30
108.30
110.78
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
5
3.09
0.30
108.30
111.39
B
B
B
O4'
C1'
N9
DG
DG
DG
20
20
20
N
6
2.82
0.30
108.30
111.12
A
A
A
O4'
C1'
N9
DG
DG
DG
3
3
3
N
6
4.82
0.30
108.30
113.12
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
6
3.52
0.30
108.30
111.82
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
6
5.56
0.30
108.30
113.86
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
6
6.39
0.60
106.00
112.39
B
B
B
O4'
C4'
C3'
DA
DA
DA
13
13
13
N
6
4.54
0.30
108.30
112.84
B
B
B
O4'
C1'
N9
DA
DA
DA
13
13
13
N
6
5.26
0.60
106.00
111.26
B
B
B
O4'
C4'
C3'
DA
DA
DA
15
15
15
N
6
-4.96
0.70
102.20
97.24
B
B
B
C4'
C3'
C2'
DA
DA
DA
15
15
15
N
6
5.44
0.30
108.30
113.74
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
6
2.77
0.30
108.30
111.07
B
B
B
O4'
C1'
N9
DG
DG
DG
17
17
17
N
6
2.05
0.30
108.30
110.35
B
B
B
O4'
C1'
N1
DC
DC
DC
18
18
18
N
6
3.43
0.30
108.30
111.73
B
B
B
O4'
C1'
N9
DG
DG
DG
20
20
20
N
7
2.16
0.30
108.30
110.46
A
A
A
O4'
C1'
N9
DG
DG
DG
3
3
3
N
7
7.19
0.30
108.30
115.49
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
7
7.82
1.20
119.70
127.52
A
A
A
C3'
O3'
P
DC
DC
ATL
7
7
8
Y
7
6.42
0.30
108.30
114.72
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
7
1.96
0.30
108.30
110.26
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
7
5.03
0.30
108.30
113.33
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
7
5.95
0.60
106.00
111.95
B
B
B
O4'
C4'
C3'
DA
DA
DA
13
13
13
N
7
3.60
0.30
108.30
111.90
B
B
B
O4'
C1'
N9
DA
DA
DA
13
13
13
N
7
5.34
0.60
106.00
111.34
B
B
B
O4'
C4'
C3'
DA
DA
DA
15
15
15
N
7
-5.02
0.70
102.20
97.18
B
B
B
C4'
C3'
C2'
DA
DA
DA
15
15
15
N
7
5.58
0.30
108.30
113.88
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
7
1.97
0.30
108.30
110.27
B
B
B
O4'
C1'
N9
DG
DG
DG
17
17
17
N
7
2.56
0.30
108.30
110.86
B
B
B
O4'
C1'
N9
DG
DG
DG
20
20
20
N
8
2.29
0.30
108.30
110.59
A
A
A
O4'
C1'
N9
DG
DG
DG
3
3
3
N
8
5.41
0.30
108.30
113.71
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
8
4.17
0.30
108.30
112.47
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
8
1.98
0.30
108.30
110.28
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
8
5.10
0.30
108.30
113.40
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
8
6.31
0.60
106.00
112.31
B
B
B
O4'
C4'
C3'
DA
DA
DA
13
13
13
N
8
3.72
0.30
108.30
112.02
B
B
B
O4'
C1'
N9
DA
DA
DA
13
13
13
N
8
5.41
0.60
106.00
111.41
B
B
B
O4'
C4'
C3'
DA
DA
DA
15
15
15
N
8
-5.05
0.70
102.20
97.15
B
B
B
C4'
C3'
C2'
DA
DA
DA
15
15
15
N
8
5.70
0.30
108.30
114.00
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
8
2.17
0.30
108.30
110.47
B
B
B
O4'
C1'
N9
DG
DG
DG
17
17
17
N
8
1.92
0.30
108.30
110.22
B
B
B
O4'
C1'
N1
DC
DC
DC
18
18
18
N
8
2.74
0.30
108.30
111.04
B
B
B
O4'
C1'
N9
DG
DG
DG
20
20
20
N
9
2.62
0.30
108.30
110.92
A
A
A
O4'
C1'
N9
DG
DG
DG
3
3
3
N
9
4.11
0.30
108.30
112.41
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
9
2.11
0.30
108.30
110.41
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
9
5.42
0.30
108.30
113.72
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
9
5.93
0.60
106.00
111.93
B
B
B
O4'
C4'
C3'
DA
DA
DA
13
13
13
N
9
3.30
0.30
108.30
111.60
B
B
B
O4'
C1'
N9
DA
DA
DA
13
13
13
N
9
5.33
0.60
106.00
111.33
B
B
B
O4'
C4'
C3'
DA
DA
DA
15
15
15
N
9
-4.94
0.70
102.20
97.26
B
B
B
C4'
C3'
C2'
DA
DA
DA
15
15
15
N
9
5.76
0.30
108.30
114.06
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
9
2.30
0.30
108.30
110.60
B
B
B
O4'
C1'
N9
DG
DG
DG
17
17
17
N
9
1.98
0.30
108.30
110.28
B
B
B
O4'
C1'
N1
DC
DC
DC
18
18
18
N
9
2.30
0.30
108.30
110.60
B
B
B
O4'
C1'
N9
DG
DG
DG
20
20
20
N
10
2.81
0.30
108.30
111.11
A
A
A
O4'
C1'
N9
DG
DG
DG
3
3
3
N
10
4.81
0.30
108.30
113.11
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
10
4.51
0.30
108.30
112.81
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
10
1.97
0.30
108.30
110.27
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
10
5.40
0.30
108.30
113.70
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
10
6.33
0.60
106.00
112.33
B
B
B
O4'
C4'
C3'
DA
DA
DA
13
13
13
N
10
3.20
0.30
108.30
111.50
B
B
B
O4'
C1'
N9
DA
DA
DA
13
13
13
N
10
7.22
1.20
119.70
126.92
B
B
B
C3'
O3'
P
DA
DA
DG
13
13
14
Y
10
5.24
0.60
106.00
111.24
B
B
B
O4'
C4'
C3'
DA
DA
DA
15
15
15
N
10
-5.06
0.70
102.20
97.14
B
B
B
C4'
C3'
C2'
DA
DA
DA
15
15
15
N
10
5.06
0.30
108.30
113.36
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
10
2.52
0.30
108.30
110.82
B
B
B
O4'
C1'
N9
DG
DG
DG
17
17
17
N
10
1.97
0.30
108.30
110.27
B
B
B
O4'
C1'
N1
DC
DC
DC
18
18
18
N
10
2.25
0.30
108.30
110.55
B
B
B
O4'
C1'
N9
DG
DG
DG
20
20
20
N
11
2.93
0.30
108.30
111.23
A
A
A
O4'
C1'
N9
DG
DG
DG
3
3
3
N
11
5.78
0.30
108.30
114.08
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
11
3.75
0.30
108.30
112.05
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
11
1.90
0.30
108.30
110.20
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
11
4.95
0.30
108.30
113.25
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
11
6.07
0.60
106.00
112.07
B
B
B
O4'
C4'
C3'
DA
DA
DA
13
13
13
N
11
4.35
0.30
108.30
112.65
B
B
B
O4'
C1'
N9
DA
DA
DA
13
13
13
N
11
5.47
0.60
106.00
111.47
B
B
B
O4'
C4'
C3'
DA
DA
DA
15
15
15
N
11
-5.24
0.70
102.20
96.96
B
B
B
C4'
C3'
C2'
DA
DA
DA
15
15
15
N
11
5.47
0.30
108.30
113.77
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
11
2.47
0.30
108.30
110.77
B
B
B
O4'
C1'
N9
DG
DG
DG
17
17
17
N
11
1.90
0.30
108.30
110.20
B
B
B
O4'
C1'
N1
DC
DC
DC
18
18
18
N
11
2.32
0.30
108.30
110.62
B
B
B
O4'
C1'
N9
DG
DG
DG
20
20
20
N
12
2.17
0.30
108.30
110.47
A
A
A
O4'
C1'
N9
DG
DG
DG
3
3
3
N
12
5.06
0.30
108.30
113.36
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
12
3.65
0.30
108.30
111.95
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
12
1.86
0.30
108.30
110.16
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
12
6.75
0.30
108.30
115.05
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
12
6.28
0.60
106.00
112.28
B
B
B
O4'
C4'
C3'
DA
DA
DA
13
13
13
N
12
4.20
0.30
108.30
112.50
B
B
B
O4'
C1'
N9
DA
DA
DA
13
13
13
N
12
5.33
0.60
106.00
111.33
B
B
B
O4'
C4'
C3'
DA
DA
DA
15
15
15
N
12
-5.24
0.70
102.20
96.96
B
B
B
C4'
C3'
C2'
DA
DA
DA
15
15
15
N
12
5.35
0.30
108.30
113.65
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
12
2.67
0.30
108.30
110.97
B
B
B
O4'
C1'
N9
DG
DG
DG
17
17
17
N
12
2.67
0.30
108.30
110.97
B
B
B
O4'
C1'
N1
DC
DC
DC
18
18
18
N
12
2.34
0.30
108.30
110.64
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
12
4.66
0.30
108.30
112.96
B
B
B
O4'
C1'
N9
DG
DG
DG
20
20
20
N
13
2.13
0.30
108.30
110.43
A
A
A
O4'
C1'
N9
DG
DG
DG
3
3
3
N
13
5.07
0.30
108.30
113.37
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
13
3.96
0.30
108.30
112.26
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
13
1.88
0.30
108.30
110.18
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
13
5.80
0.30
108.30
114.10
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
13
6.40
0.60
106.00
112.40
B
B
B
O4'
C4'
C3'
DA
DA
DA
13
13
13
N
13
4.22
0.30
108.30
112.52
B
B
B
O4'
C1'
N9
DA
DA
DA
13
13
13
N
13
5.26
0.60
106.00
111.26
B
B
B
O4'
C4'
C3'
DA
DA
DA
15
15
15
N
13
-4.87
0.70
102.20
97.33
B
B
B
C4'
C3'
C2'
DA
DA
DA
15
15
15
N
13
5.28
0.30
108.30
113.58
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
13
3.10
0.30
108.30
111.40
B
B
B
O4'
C1'
N9
DG
DG
DG
17
17
17
N
13
2.95
0.30
108.30
111.25
B
B
B
O4'
C1'
N1
DC
DC
DC
18
18
18
N
13
3.26
0.50
106.80
110.06
B
B
B
O4'
C1'
C2'
DA
DA
DA
19
19
19
N
13
2.43
0.30
108.30
110.73
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
13
2.78
0.30
108.30
111.08
B
B
B
O4'
C1'
N9
DG
DG
DG
20
20
20
N
14
1.84
0.30
108.30
110.14
A
A
A
O4'
C1'
N9
DG
DG
DG
3
3
3
N
14
4.43
0.30
108.30
112.73
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
14
3.95
0.30
108.30
112.25
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
14
1.85
0.30
108.30
110.15
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
14
5.88
0.30
108.30
114.18
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
14
6.39
0.60
106.00
112.39
B
B
B
O4'
C4'
C3'
DA
DA
DA
13
13
13
N
14
4.18
0.30
108.30
112.48
B
B
B
O4'
C1'
N9
DA
DA
DA
13
13
13
N
14
5.22
0.60
106.00
111.22
B
B
B
O4'
C4'
C3'
DA
DA
DA
15
15
15
N
14
-4.89
0.70
102.20
97.31
B
B
B
C4'
C3'
C2'
DA
DA
DA
15
15
15
N
14
5.31
0.30
108.30
113.61
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
14
2.62
0.30
108.30
110.92
B
B
B
O4'
C1'
N9
DG
DG
DG
17
17
17
N
14
3.38
0.30
108.30
111.68
B
B
B
O4'
C1'
N1
DC
DC
DC
18
18
18
N
14
3.29
0.50
106.80
110.09
B
B
B
O4'
C1'
C2'
DA
DA
DA
19
19
19
N
14
2.15
0.30
108.30
110.45
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
14
2.71
0.30
108.30
111.01
B
B
B
O4'
C1'
N9
DG
DG
DG
20
20
20
N
15
1.91
0.30
108.30
110.21
A
A
A
O4'
C1'
N9
DG
DG
DG
3
3
3
N
15
5.45
0.30
108.30
113.75
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
15
3.94
0.30
108.30
112.24
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
15
6.28
0.30
108.30
114.58
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
15
6.18
0.60
106.00
112.18
B
B
B
O4'
C4'
C3'
DA
DA
DA
13
13
13
N
15
5.59
0.30
108.30
113.89
B
B
B
O4'
C1'
N9
DA
DA
DA
13
13
13
N
15
5.15
0.60
106.00
111.15
B
B
B
O4'
C4'
C3'
DA
DA
DA
15
15
15
N
15
-4.72
0.70
102.20
97.48
B
B
B
C4'
C3'
C2'
DA
DA
DA
15
15
15
N
15
5.72
0.30
108.30
114.02
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
15
2.89
0.30
108.30
111.19
B
B
B
O4'
C1'
N9
DG
DG
DG
17
17
17
N
15
2.98
0.30
108.30
111.28
B
B
B
O4'
C1'
N1
DC
DC
DC
18
18
18
N
15
3.26
0.50
106.80
110.06
B
B
B
O4'
C1'
C2'
DA
DA
DA
19
19
19
N
15
2.40
0.30
108.30
110.70
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
15
2.98
0.30
108.30
111.28
B
B
B
O4'
C1'
N9
DG
DG
DG
20
20
20
N
16
2.60
0.30
108.30
110.90
A
A
A
O4'
C1'
N9
DG
DG
DG
3
3
3
N
16
4.19
0.30
108.30
112.49
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
16
4.02
0.30
108.30
112.32
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
16
1.84
0.30
108.30
110.14
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
16
4.05
0.30
108.30
112.35
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
16
6.25
0.60
106.00
112.25
B
B
B
O4'
C4'
C3'
DA
DA
DA
13
13
13
N
16
4.52
0.30
108.30
112.82
B
B
B
O4'
C1'
N9
DA
DA
DA
13
13
13
N
16
5.26
0.60
106.00
111.26
B
B
B
O4'
C4'
C3'
DA
DA
DA
15
15
15
N
16
-4.93
0.70
102.20
97.27
B
B
B
C4'
C3'
C2'
DA
DA
DA
15
15
15
N
16
5.46
0.30
108.30
113.76
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
16
2.88
0.30
108.30
111.18
B
B
B
O4'
C1'
N9
DG
DG
DG
17
17
17
N
16
1.91
0.30
108.30
110.21
B
B
B
O4'
C1'
N1
DC
DC
DC
18
18
18
N
16
3.39
0.30
108.30
111.69
B
B
B
O4'
C1'
N9
DG
DG
DG
20
20
20
N
17
2.38
0.30
108.30
110.68
A
A
A
O4'
C1'
N9
DG
DG
DG
3
3
3
N
17
5.44
0.30
108.30
113.74
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
17
3.96
0.30
108.30
112.26
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
17
2.10
0.30
108.30
110.40
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
17
5.53
0.30
108.30
113.83
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
17
6.15
0.60
106.00
112.15
B
B
B
O4'
C4'
C3'
DA
DA
DA
13
13
13
N
17
4.00
0.30
108.30
112.30
B
B
B
O4'
C1'
N9
DA
DA
DA
13
13
13
N
17
5.30
0.60
106.00
111.30
B
B
B
O4'
C4'
C3'
DA
DA
DA
15
15
15
N
17
-4.90
0.70
102.20
97.30
B
B
B
C4'
C3'
C2'
DA
DA
DA
15
15
15
N
17
5.50
0.30
108.30
113.80
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
17
2.16
0.30
108.30
110.46
B
B
B
O4'
C1'
N9
DG
DG
DG
17
17
17
N
17
1.83
0.30
108.30
110.13
B
B
B
O4'
C1'
N1
DC
DC
DC
18
18
18
N
17
2.65
0.30
108.30
110.95
B
B
B
O4'
C1'
N9
DG
DG
DG
20
20
20
N
18
5.07
0.30
108.30
113.37
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
18
3.84
0.30
108.30
112.14
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
18
1.89
0.30
108.30
110.19
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
18
5.72
0.30
108.30
114.02
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
18
6.42
0.60
106.00
112.42
B
B
B
O4'
C4'
C3'
DA
DA
DA
13
13
13
N
18
4.26
0.30
108.30
112.56
B
B
B
O4'
C1'
N9
DA
DA
DA
13
13
13
N
18
5.32
0.60
106.00
111.32
B
B
B
O4'
C4'
C3'
DA
DA
DA
15
15
15
N
18
-5.20
0.70
102.20
97.00
B
B
B
C4'
C3'
C2'
DA
DA
DA
15
15
15
N
18
5.24
0.30
108.30
113.54
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
18
2.60
0.30
108.30
110.90
B
B
B
O4'
C1'
N9
DG
DG
DG
17
17
17
N
18
2.90
0.30
108.30
111.20
B
B
B
O4'
C1'
N1
DC
DC
DC
18
18
18
N
18
3.22
0.50
106.80
110.02
B
B
B
O4'
C1'
C2'
DA
DA
DA
19
19
19
N
18
2.33
0.30
108.30
110.63
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
18
2.96
0.30
108.30
111.26
B
B
B
O4'
C1'
N9
DG
DG
DG
20
20
20
N
19
2.48
0.30
108.30
110.78
A
A
A
O4'
C1'
N9
DG
DG
DG
3
3
3
N
19
4.10
0.30
108.30
112.40
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
19
4.49
0.30
108.30
112.79
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
19
6.12
0.30
108.30
114.42
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
19
6.41
0.60
106.00
112.41
B
B
B
O4'
C4'
C3'
DA
DA
DA
13
13
13
N
19
4.21
0.30
108.30
112.51
B
B
B
O4'
C1'
N9
DA
DA
DA
13
13
13
N
19
5.33
0.60
106.00
111.33
B
B
B
O4'
C4'
C3'
DA
DA
DA
15
15
15
N
19
-5.12
0.70
102.20
97.08
B
B
B
C4'
C3'
C2'
DA
DA
DA
15
15
15
N
19
5.22
0.30
108.30
113.52
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
19
2.77
0.30
108.30
111.07
B
B
B
O4'
C1'
N9
DG
DG
DG
17
17
17
N
19
1.99
0.30
108.30
110.29
B
B
B
O4'
C1'
N1
DC
DC
DC
18
18
18
N
19
2.16
0.30
108.30
110.46
B
B
B
O4'
C1'
N9
DG
DG
DG
20
20
20
N
20
4.10
0.30
108.30
112.40
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
20
4.00
0.30
108.30
112.30
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
20
1.81
0.30
108.30
110.11
A
A
A
O4'
C1'
N1
DC
DC
DC
10
10
10
N
20
5.41
0.30
108.30
113.71
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
20
6.34
0.60
106.00
112.34
B
B
B
O4'
C4'
C3'
DA
DA
DA
13
13
13
N
20
4.35
0.30
108.30
112.65
B
B
B
O4'
C1'
N9
DA
DA
DA
13
13
13
N
20
5.20
0.60
106.00
111.20
B
B
B
O4'
C4'
C3'
DA
DA
DA
15
15
15
N
20
-5.05
0.70
102.20
97.15
B
B
B
C4'
C3'
C2'
DA
DA
DA
15
15
15
N
20
5.34
0.30
108.30
113.64
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
20
2.63
0.30
108.30
110.93
B
B
B
O4'
C1'
N9
DG
DG
DG
17
17
17
N
20
2.86
0.30
108.30
111.16
B
B
B
O4'
C1'
N1
DC
DC
DC
18
18
18
N
20
3.01
0.50
106.80
109.81
B
B
B
O4'
C1'
C2'
DA
DA
DA
19
19
19
N
20
2.28
0.30
108.30
110.58
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
20
3.49
0.30
108.30
111.79
B
B
B
O4'
C1'
N9
DG
DG
DG
20
20
20
N
5'-D(*C)-R(P*(ATL))-D(P*GP*C)-R(P*(ATL)P*(ATL))-D(P*C)-R(P*(ATL))-D(P*GP*C)-3'
Solution structure of alfa-L-LNA:DNA duplex
1
N
N
2
N
N
covale
1.623
A
DC
1
A
O3'
DC
1
1_555
A
ATL
2
A
P
ATL
2
1_555
covale
1.615
A
ATL
2
A
O3'
ATL
2
1_555
A
DG
3
A
P
DG
3
1_555
covale
1.619
A
DC
4
A
O3'
DC
4
1_555
A
ATL
5
A
P
ATL
5
1_555
covale
1.611
A
ATL
5
A
O3'
ATL
5
1_555
A
ATL
6
A
P
ATL
6
1_555
covale
1.613
A
ATL
6
A
O3'
ATL
6
1_555
A
DC
7
A
P
DC
7
1_555
covale
1.620
A
DC
7
A
O3'
DC
7
1_555
A
ATL
8
A
P
ATL
8
1_555
covale
1.615
A
ATL
8
A
O3'
ATL
8
1_555
A
DG
9
A
P
DG
9
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N3
DC
1
1_555
B
DG
20
B
N1
DG
10
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N4
DC
1
1_555
B
DG
20
B
O6
DG
10
1_555
hydrog
WATSON-CRICK
A
DC
1
A
O2
DC
1
1_555
B
DG
20
B
N2
DG
10
1_555
hydrog
WATSON-CRICK
A
ATL
2
A
N3
ATL
2
1_555
B
DA
19
B
N1
DA
9
1_555
hydrog
WATSON-CRICK
A
ATL
2
A
O4
ATL
2
1_555
B
DA
19
B
N6
DA
9
1_555
hydrog
WATSON-CRICK
A
DG
3
A
N1
DG
3
1_555
B
DC
18
B
N3
DC
8
1_555
hydrog
WATSON-CRICK
A
DG
3
A
N2
DG
3
1_555
B
DC
18
B
O2
DC
8
1_555
hydrog
WATSON-CRICK
A
DG
3
A
O6
DG
3
1_555
B
DC
18
B
N4
DC
8
1_555
hydrog
WATSON-CRICK
A
DC
4
A
N3
DC
4
1_555
B
DG
17
B
N1
DG
7
1_555
hydrog
WATSON-CRICK
A
DC
4
A
N4
DC
4
1_555
B
DG
17
B
O6
DG
7
1_555
hydrog
WATSON-CRICK
A
DC
4
A
O2
DC
4
1_555
B
DG
17
B
N2
DG
7
1_555
hydrog
WATSON-CRICK
A
ATL
5
A
N3
ATL
5
1_555
B
DA
16
B
N1
DA
6
1_555
hydrog
WATSON-CRICK
A
ATL
5
A
O4
ATL
5
1_555
B
DA
16
B
N6
DA
6
1_555
hydrog
WATSON-CRICK
A
ATL
6
A
N3
ATL
6
1_555
B
DA
15
B
N1
DA
5
1_555
hydrog
WATSON-CRICK
A
ATL
6
A
O4
ATL
6
1_555
B
DA
15
B
N6
DA
5
1_555
hydrog
WATSON-CRICK
A
DC
7
A
N3
DC
7
1_555
B
DG
14
B
N1
DG
4
1_555
hydrog
WATSON-CRICK
A
DC
7
A
N4
DC
7
1_555
B
DG
14
B
O6
DG
4
1_555
hydrog
WATSON-CRICK
A
DC
7
A
O2
DC
7
1_555
B
DG
14
B
N2
DG
4
1_555
hydrog
WATSON-CRICK
A
ATL
8
A
N3
ATL
8
1_555
B
DA
13
B
N1
DA
3
1_555
hydrog
WATSON-CRICK
A
ATL
8
A
O4
ATL
8
1_555
B
DA
13
B
N6
DA
3
1_555
hydrog
WATSON-CRICK
A
DG
9
A
N1
DG
9
1_555
B
DC
12
B
N3
DC
2
1_555
hydrog
WATSON-CRICK
A
DG
9
A
N2
DG
9
1_555
B
DC
12
B
O2
DC
2
1_555
hydrog
WATSON-CRICK
A
DG
9
A
O6
DG
9
1_555
B
DC
12
B
N4
DC
2
1_555
hydrog
WATSON-CRICK
A
DC
10
A
N3
DC
10
1_555
B
DG
11
B
N1
DG
1
1_555
hydrog
WATSON-CRICK
A
DC
10
A
N4
DC
10
1_555
B
DG
11
B
O6
DG
1
1_555
hydrog
WATSON-CRICK
A
DC
10
A
O2
DC
10
1_555
B
DG
11
B
N2
DG
1
1_555
LOCKED NUCLEIC ACID
LOCKED NUCLEIC ACID, LNA, DNA
1GV6
PDB
1
1GV6
1GV6
PDB
2
1GV6
1
10
1GV6
1
10
1GV6
A
1
1
10
11
20
1GV6
11
20
1GV6
B
2
1
10
1
P 1