1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Tang, C.
Gitti, R.K.
Lee, B.M.
Walker, J.
Summers, M.F.
Yoo, S.
Sundquist, W.I.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
9
537
10.1038/NSB806
12032547
Structure of the N-Terminal 283-Residue Fragment of the Immature HIV-1 Gag Polyprotein
2002
US
Science
SCIEAS
0038
0036-8075
273
231
10.1126/SCIENCE.273.5272.231
8662505
Structure of the Amino-Terminal Core Domain of the HIV-1 Capsid Protein.
1996
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
16716.189
GAG POLYPROTEIN
AMINO-TERMINAL CORE DOMAIN RESIDUES 132 - 282
1
man
polymer
no
no
PIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEW
DRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSIL
PIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEW
DRLHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTHNPPIPVGEIYKRWIILGLNKIVRMYSPTSIL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
PNL4-3
sample
CLONE 12
11698
HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 (NEW YORK-5 ISOLATE)
469008
ESCHERICHIA COLI
BL21(DE3)
PLASMID
PET11A
repository
Initial release
Database references
Derived calculations
Other
Source and taxonomy
Structure summary
Version format compliance
Source and taxonomy
1
0
2002-06-21
1
1
2014-02-05
1
2
2014-03-12
2004-03-26
SPRSDE
STRUCTURE OF THE HIV-1 CAPSID PROTEIN DIMERIZATION DOMAINAT 2.6A RESOLUTION
HIV CAPSID C-TERMINAL DOMAIN
HIV-1 CAPSID PROTEIN (P24) COMPLEX WITH FAB25.3
HUMAN CYCLOPHILIN A BOUND TO THE AMINO- TERMINAL DOMAIN OF HIV-1 CAPSID
HIV CAPSID C-TERMINAL DOMAIN (CAC146)
HIV-1 CAPSID PROTEIN C-TERMINAL FRAGMENT PLUS GAG P2 DOMAIN
TRIMERIC HIV-1 MATRIX PROTEIN
HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 MATRIX PROTEIN 2HMX 3
PDBE
Y
PDBE
2002-03-22
REL
GENBANK PID G902799 FOR GAG POLYPROTEIN PRECURSOR
HSQC HNCA, HN(CO)CA, HNCO, HNHA HMQC-NOESY-HSQC, HSQC-NOESY-HSQC, HMQC-NOESY-HMQC
LOWEST TARGET FUNCTION
100
20
HMQC-NOESY-HSQC
HSQC HNCA
HN(CO)CA
HNCO
HNHA HMQC-NOESY-HSQC
HSQC-NOESY-HSQC
HMQC-NOESY-HMQC
10
mM
5.5
pH
1
atm
298
K
TORSION ANGLE DYNAMICS FOLLOWED BY ENERGY MINIMIZATION. GUNTERT, P., MUMENTHALER, C. WUTHRICH, K. (1997). TORSION ANGLE DYNAMICS FOR NMR STRUCTURE CALCULATION WITH THE NEW PROGRAM DYANA. J. MOL. BIOL. 273, 283-298.
torsion angle dynamics
1
GUNTERT,WUTHRICH
refinement
DYANA
structure solution
DYANA
600
Bruker
DMX
PRO
1
n
1
PRO
1
A
ILE
2
n
2
ILE
2
A
VAL
3
n
3
VAL
3
A
GLN
4
n
4
GLN
4
A
ASN
5
n
5
ASN
5
A
LEU
6
n
6
LEU
6
A
GLN
7
n
7
GLN
7
A
GLY
8
n
8
GLY
8
A
GLN
9
n
9
GLN
9
A
MET
10
n
10
MET
10
A
VAL
11
n
11
VAL
11
A
HIS
12
n
12
HIS
12
A
GLN
13
n
13
GLN
13
A
ALA
14
n
14
ALA
14
A
ILE
15
n
15
ILE
15
A
SER
16
n
16
SER
16
A
PRO
17
n
17
PRO
17
A
ARG
18
n
18
ARG
18
A
THR
19
n
19
THR
19
A
LEU
20
n
20
LEU
20
A
ASN
21
n
21
ASN
21
A
ALA
22
n
22
ALA
22
A
TRP
23
n
23
TRP
23
A
VAL
24
n
24
VAL
24
A
LYS
25
n
25
LYS
25
A
VAL
26
n
26
VAL
26
A
VAL
27
n
27
VAL
27
A
GLU
28
n
28
GLU
28
A
GLU
29
n
29
GLU
29
A
LYS
30
n
30
LYS
30
A
ALA
31
n
31
ALA
31
A
PHE
32
n
32
PHE
32
A
SER
33
n
33
SER
33
A
PRO
34
n
34
PRO
34
A
GLU
35
n
35
GLU
35
A
VAL
36
n
36
VAL
36
A
ILE
37
n
37
ILE
37
A
PRO
38
n
38
PRO
38
A
MET
39
n
39
MET
39
A
PHE
40
n
40
PHE
40
A
SER
41
n
41
SER
41
A
ALA
42
n
42
ALA
42
A
LEU
43
n
43
LEU
43
A
SER
44
n
44
SER
44
A
GLU
45
n
45
GLU
45
A
GLY
46
n
46
GLY
46
A
ALA
47
n
47
ALA
47
A
THR
48
n
48
THR
48
A
PRO
49
n
49
PRO
49
A
GLN
50
n
50
GLN
50
A
ASP
51
n
51
ASP
51
A
LEU
52
n
52
LEU
52
A
ASN
53
n
53
ASN
53
A
THR
54
n
54
THR
54
A
MET
55
n
55
MET
55
A
LEU
56
n
56
LEU
56
A
ASN
57
n
57
ASN
57
A
THR
58
n
58
THR
58
A
VAL
59
n
59
VAL
59
A
GLY
60
n
60
GLY
60
A
GLY
61
n
61
GLY
61
A
HIS
62
n
62
HIS
62
A
GLN
63
n
63
GLN
63
A
ALA
64
n
64
ALA
64
A
ALA
65
n
65
ALA
65
A
MET
66
n
66
MET
66
A
GLN
67
n
67
GLN
67
A
MET
68
n
68
MET
68
A
LEU
69
n
69
LEU
69
A
LYS
70
n
70
LYS
70
A
GLU
71
n
71
GLU
71
A
THR
72
n
72
THR
72
A
ILE
73
n
73
ILE
73
A
ASN
74
n
74
ASN
74
A
GLU
75
n
75
GLU
75
A
GLU
76
n
76
GLU
76
A
ALA
77
n
77
ALA
77
A
ALA
78
n
78
ALA
78
A
GLU
79
n
79
GLU
79
A
TRP
80
n
80
TRP
80
A
ASP
81
n
81
ASP
81
A
ARG
82
n
82
ARG
82
A
LEU
83
n
83
LEU
83
A
HIS
84
n
84
HIS
84
A
PRO
85
n
85
PRO
85
A
VAL
86
n
86
VAL
86
A
HIS
87
n
87
HIS
87
A
ALA
88
n
88
ALA
88
A
GLY
89
n
89
GLY
89
A
PRO
90
n
90
PRO
90
A
ILE
91
n
91
ILE
91
A
ALA
92
n
92
ALA
92
A
PRO
93
n
93
PRO
93
A
GLY
94
n
94
GLY
94
A
GLN
95
n
95
GLN
95
A
MET
96
n
96
MET
96
A
ARG
97
n
97
ARG
97
A
GLU
98
n
98
GLU
98
A
PRO
99
n
99
PRO
99
A
ARG
100
n
100
ARG
100
A
GLY
101
n
101
GLY
101
A
SER
102
n
102
SER
102
A
ASP
103
n
103
ASP
103
A
ILE
104
n
104
ILE
104
A
ALA
105
n
105
ALA
105
A
GLY
106
n
106
GLY
106
A
THR
107
n
107
THR
107
A
THR
108
n
108
THR
108
A
SER
109
n
109
SER
109
A
THR
110
n
110
THR
110
A
LEU
111
n
111
LEU
111
A
GLN
112
n
112
GLN
112
A
GLU
113
n
113
GLU
113
A
GLN
114
n
114
GLN
114
A
ILE
115
n
115
ILE
115
A
GLY
116
n
116
GLY
116
A
TRP
117
n
117
TRP
117
A
MET
118
n
118
MET
118
A
THR
119
n
119
THR
119
A
HIS
120
n
120
HIS
120
A
ASN
121
n
121
ASN
121
A
PRO
122
n
122
PRO
122
A
PRO
123
n
123
PRO
123
A
ILE
124
n
124
ILE
124
A
PRO
125
n
125
PRO
125
A
VAL
126
n
126
VAL
126
A
GLY
127
n
127
GLY
127
A
GLU
128
n
128
GLU
128
A
ILE
129
n
129
ILE
129
A
TYR
130
n
130
TYR
130
A
LYS
131
n
131
LYS
131
A
ARG
132
n
132
ARG
132
A
TRP
133
n
133
TRP
133
A
ILE
134
n
134
ILE
134
A
ILE
135
n
135
ILE
135
A
LEU
136
n
136
LEU
136
A
GLY
137
n
137
GLY
137
A
LEU
138
n
138
LEU
138
A
ASN
139
n
139
ASN
139
A
LYS
140
n
140
LYS
140
A
ILE
141
n
141
ILE
141
A
VAL
142
n
142
VAL
142
A
ARG
143
n
143
ARG
143
A
MET
144
n
144
MET
144
A
TYR
145
n
145
TYR
145
A
SER
146
n
146
SER
146
A
PRO
147
n
147
PRO
147
A
THR
148
n
148
THR
148
A
SER
149
n
149
SER
149
A
ILE
150
n
150
ILE
150
A
LEU
151
n
151
LEU
151
A
software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
3
A
N
VAL
3
A
O
VAL
11
A
O
VAL
11
5
A
A
O
H
TRP
HIS
80
84
1.56
9
A
A
O
HG
ILE
SER
37
41
1.56
11
A
A
O
HE1
ARG
TRP
97
117
1.43
11
A
A
O
H
TRP
HIS
80
84
1.51
12
A
A
O
HE1
ARG
TRP
97
117
1.60
13
A
A
O
HE1
ARG
TRP
97
117
1.49
16
A
A
O
H
TRP
HIS
80
84
1.58
16
A
A
O
H
TRP
ILE
117
124
1.58
17
A
A
O
H
LEU
GLN
6
9
1.42
17
A
A
O
HE1
ARG
TRP
97
117
1.49
18
A
A
O
HG1
ILE
THR
115
119
1.54
19
A
A
O
HE1
ARG
TRP
97
117
1.49
20
A
A
O
H
TRP
ILE
117
124
1.58
1
A
ASN
5
-49.16
177.08
1
A
ALA
14
47.10
-174.64
1
A
LYS
30
-119.07
-77.21
1
A
ALA
31
84.38
61.06
1
A
VAL
59
-44.44
167.81
1
A
LEU
83
-71.12
-79.25
1
A
VAL
86
-176.81
131.23
1
A
ALA
88
-56.42
96.10
1
A
ALA
92
-40.20
154.20
1
A
ARG
100
45.71
-173.24
1
A
THR
110
-114.39
-146.77
1
A
PRO
125
-75.00
48.80
1
A
THR
148
32.99
89.62
1
A
SER
149
-109.83
77.39
2
A
ASN
5
-49.38
172.92
2
A
ALA
14
47.34
-173.63
2
A
LYS
30
-91.78
-72.79
2
A
ALA
31
85.49
93.84
2
A
PHE
32
48.47
74.86
2
A
VAL
59
-42.88
165.63
2
A
LEU
83
-71.10
-87.10
2
A
PRO
85
-75.02
-167.10
2
A
ALA
88
53.25
75.00
2
A
MET
96
-42.28
165.18
2
A
ARG
100
-63.32
-147.95
2
A
PRO
125
-75.03
48.96
2
A
SER
146
39.21
66.77
2
A
THR
148
-173.38
61.71
3
A
ASN
5
-45.45
169.15
3
A
ALA
14
47.86
-174.76
3
A
LYS
30
-119.51
-79.68
3
A
ALA
31
83.48
56.87
3
A
SER
44
-77.90
-78.76
3
A
GLU
45
77.63
-13.22
3
A
THR
48
-49.72
-179.12
3
A
VAL
59
-44.26
167.94
3
A
LEU
83
-79.49
-81.29
3
A
HIS
87
-152.43
52.87
3
A
ALA
88
40.47
83.40
3
A
ARG
97
-66.36
-179.83
3
A
PRO
99
-75.03
-167.23
3
A
ARG
100
-122.48
-91.68
3
A
PRO
125
-75.10
47.50
3
A
SER
149
60.59
157.92
4
A
ASN
5
-48.80
176.17
4
A
ALA
14
46.54
-173.26
4
A
LYS
30
-91.47
-70.29
4
A
ALA
31
89.22
76.40
4
A
PHE
32
58.50
79.07
4
A
VAL
59
-46.41
171.39
4
A
PRO
85
-74.98
-164.55
4
A
VAL
86
61.80
114.92
4
A
ALA
88
46.06
93.45
4
A
ILE
91
47.94
-175.07
4
A
PRO
125
-74.95
48.38
4
A
SER
146
39.35
66.25
4
A
THR
148
-150.21
59.05
4
A
SER
149
68.20
107.17
5
A
LEU
6
83.32
-48.82
5
A
GLN
7
164.37
-24.06
5
A
GLN
9
161.17
159.45
5
A
ALA
14
45.80
-173.38
5
A
LYS
30
-120.23
-79.85
5
A
ALA
31
85.09
59.46
5
A
VAL
59
-43.29
166.84
5
A
VAL
86
-39.81
141.65
5
A
HIS
87
177.84
58.95
5
A
MET
96
36.04
82.01
5
A
PRO
125
-74.97
49.43
5
A
SER
146
42.19
79.97
5
A
THR
148
-118.91
57.94
5
A
SER
149
67.08
87.07
6
A
ASN
5
-49.54
178.04
6
A
ALA
14
46.71
-174.25
6
A
LYS
30
-106.98
-76.15
6
A
ALA
31
88.37
74.26
6
A
SER
44
-76.93
-78.65
6
A
GLU
45
81.58
-17.80
6
A
VAL
59
-45.93
170.80
6
A
LEU
83
-75.41
-84.25
6
A
VAL
86
-176.60
56.52
6
A
HIS
87
-149.93
57.51
6
A
ARG
100
-93.29
35.11
6
A
SER
146
39.14
68.63
6
A
THR
148
-171.89
58.39
7
A
ASN
5
-50.19
178.70
7
A
ALA
14
47.00
-173.67
7
A
LYS
30
-119.39
-85.68
7
A
ALA
31
84.01
70.09
7
A
PHE
32
53.31
100.10
7
A
SER
44
-84.68
-82.19
7
A
GLU
45
78.00
-17.15
7
A
THR
48
-49.79
-178.31
7
A
VAL
59
-43.41
166.42
7
A
LEU
83
-69.43
-70.47
7
A
VAL
86
-171.11
105.87
7
A
HIS
87
-164.98
50.14
7
A
ALA
88
-176.63
-176.23
7
A
ALA
92
-43.22
152.34
7
A
PRO
125
-74.96
48.47
7
A
SER
146
41.56
77.71
7
A
THR
148
-97.81
-60.79
7
A
SER
149
-166.72
117.34
7
A
ILE
150
64.44
105.83
8
A
ASN
5
-56.20
174.41
8
A
ALA
14
46.95
-173.02
8
A
LYS
30
-108.17
-76.49
8
A
ALA
31
86.34
75.35
8
A
SER
44
-79.59
-80.41
8
A
GLU
45
84.01
-24.74
8
A
VAL
59
-43.93
167.18
8
A
ARG
97
-60.90
-177.96
8
A
ARG
100
-133.95
-67.89
8
A
SER
102
151.25
-54.87
8
A
PRO
125
-74.97
46.77
8
A
SER
146
39.49
80.94
8
A
THR
148
-163.67
55.74
9
A
ASN
5
-49.73
177.37
9
A
ALA
14
48.31
-174.04
9
A
LYS
30
-118.99
-78.31
9
A
ALA
31
87.37
93.05
9
A
PHE
32
49.70
93.52
9
A
VAL
59
-44.58
167.67
9
A
HIS
87
-170.33
52.78
9
A
ARG
100
-36.55
-32.78
9
A
SER
102
94.97
-38.40
9
A
PRO
125
-75.00
47.39
9
A
SER
146
39.10
79.19
9
A
THR
148
-96.95
57.70
10
A
GLN
7
-38.00
-37.78
10
A
ALA
14
47.47
-173.25
10
A
LYS
30
-92.83
-61.87
10
A
ALA
31
75.44
77.48
10
A
PHE
32
56.40
73.39
10
A
VAL
59
-44.13
167.81
10
A
LEU
83
-68.22
-74.95
10
A
ARG
97
-68.10
-178.59
10
A
ARG
100
-123.01
-73.88
10
A
SER
102
153.10
-55.17
10
A
PRO
125
-74.93
45.75
10
A
SER
146
38.97
78.70
10
A
THR
148
-152.35
-58.50
10
A
ILE
150
-140.77
-52.18
11
A
ASN
5
-71.60
-168.61
11
A
LEU
6
-32.00
-73.50
11
A
GLN
7
-173.37
32.32
11
A
ALA
14
47.06
-173.98
11
A
LYS
30
-95.04
-71.22
11
A
ALA
31
85.66
81.26
11
A
SER
44
-75.33
-76.03
11
A
GLU
45
81.87
-15.27
11
A
VAL
59
-43.17
165.79
11
A
MET
96
66.18
147.64
11
A
PRO
125
-75.07
49.81
11
A
PRO
147
-75.06
-169.92
11
A
SER
149
-39.44
130.68
12
A
ASN
5
-41.48
161.31
12
A
ALA
14
-43.59
165.66
12
A
ILE
15
-56.67
-172.86
12
A
LYS
30
-103.90
-70.49
12
A
ALA
31
85.71
80.58
12
A
PHE
32
55.97
82.15
12
A
VAL
59
-43.03
165.71
12
A
LEU
83
-68.62
-71.42
12
A
VAL
86
-176.23
138.99
12
A
GLU
98
-119.00
79.68
12
A
ARG
100
-75.38
-168.87
12
A
PRO
125
-74.96
48.44
12
A
THR
148
67.52
-69.02
12
A
SER
149
68.96
134.68
13
A
LEU
6
77.97
-56.07
13
A
GLN
7
167.22
-29.72
13
A
ALA
14
-43.39
164.85
13
A
LYS
30
-91.35
-76.14
13
A
ALA
31
87.63
86.71
13
A
SER
44
-75.58
-78.55
13
A
GLU
45
83.15
-22.80
13
A
VAL
59
-44.24
166.89
13
A
LEU
83
-68.23
-81.83
13
A
HIS
87
-105.37
73.29
13
A
ARG
100
-44.86
94.10
13
A
SER
102
156.13
-59.94
13
A
PRO
125
-75.03
48.37
13
A
SER
146
39.41
79.72
13
A
THR
148
-172.70
58.97
13
A
SER
149
179.00
167.33
14
A
ASN
5
-49.87
178.60
14
A
ALA
14
47.57
-174.26
14
A
LYS
30
-92.32
-71.29
14
A
ALA
31
86.95
79.62
14
A
PHE
32
58.08
84.67
14
A
VAL
59
-46.73
171.90
14
A
LEU
83
-69.58
-86.45
14
A
ALA
88
178.65
92.97
14
A
PRO
125
-74.96
44.89
14
A
SER
146
39.09
66.85
14
A
THR
148
-168.33
57.33
15
A
GLN
7
-37.59
-38.26
15
A
ALA
14
46.74
-173.57
15
A
LYS
30
-101.90
-77.11
15
A
ALA
31
88.15
75.49
15
A
VAL
59
-43.28
166.78
15
A
LEU
83
-70.50
-80.55
15
A
PRO
85
-75.06
-166.34
15
A
HIS
87
-160.42
110.83
15
A
ALA
92
-43.65
153.46
15
A
ARG
100
-76.19
-156.20
15
A
SER
102
-39.50
-29.26
15
A
PRO
125
-74.93
49.17
15
A
SER
146
40.43
81.96
15
A
SER
149
62.65
150.87
15
A
ILE
150
65.64
135.93
16
A
ASN
5
-49.97
178.55
16
A
ALA
14
47.42
-173.87
16
A
LYS
30
-122.11
-84.03
16
A
ALA
31
88.33
59.34
16
A
SER
44
-82.48
-81.02
16
A
GLU
45
80.91
-17.10
16
A
VAL
59
-56.46
178.71
16
A
HIS
62
177.42
79.45
16
A
ALA
88
58.47
159.73
16
A
MET
96
-50.19
95.71
16
A
SER
102
153.94
-57.00
16
A
PRO
125
-75.01
49.57
16
A
THR
148
62.54
140.61
16
A
SER
149
68.99
158.62
16
A
ILE
150
64.65
113.71
17
A
LEU
6
73.40
122.00
17
A
GLN
7
37.67
50.39
17
A
ALA
14
46.69
-173.10
17
A
LYS
30
-92.28
-75.12
17
A
ALA
31
86.28
88.50
17
A
VAL
59
-43.17
165.91
17
A
VAL
86
-170.47
66.17
17
A
ALA
88
-179.65
91.14
17
A
GLN
95
-71.45
-84.05
17
A
MET
96
179.38
83.91
17
A
THR
110
-106.04
-169.74
17
A
PRO
125
-74.97
46.42
17
A
SER
146
39.36
84.03
17
A
THR
148
-136.72
-61.13
17
A
SER
149
-163.01
79.35
18
A
LEU
6
73.67
-56.16
18
A
GLN
7
165.92
-28.87
18
A
ALA
14
47.14
-174.14
18
A
LYS
30
-103.39
-67.32
18
A
ALA
31
88.40
63.68
18
A
PHE
32
60.85
75.58
18
A
SER
44
-83.20
-80.96
18
A
GLU
45
81.98
-19.76
18
A
VAL
59
-45.03
169.20
18
A
LEU
83
-79.34
-80.16
18
A
PRO
85
-75.01
-169.82
18
A
ALA
88
71.91
171.63
18
A
SER
102
157.82
-55.52
18
A
PRO
125
-75.04
43.99
18
A
SER
146
39.38
69.66
19
A
ASN
5
-49.10
176.81
19
A
ALA
14
50.25
-179.01
19
A
LYS
30
-122.91
-83.41
19
A
ALA
31
90.22
77.65
19
A
PHE
32
27.91
49.41
19
A
SER
44
-84.71
-80.93
19
A
GLU
45
80.76
-17.99
19
A
THR
48
-48.95
179.91
19
A
VAL
59
-44.89
169.73
19
A
MET
96
-53.09
101.77
19
A
ARG
97
-68.13
-178.26
19
A
ARG
100
-37.62
-30.91
19
A
SER
102
99.24
-39.94
19
A
PRO
125
-75.05
47.22
19
A
SER
146
40.08
79.90
19
A
ILE
150
66.18
86.76
20
A
ALA
14
48.13
-174.77
20
A
LYS
30
-91.47
-71.60
20
A
ALA
31
87.00
86.98
20
A
PHE
32
57.66
88.73
20
A
SER
44
-81.47
-81.48
20
A
GLU
45
81.50
-18.56
20
A
VAL
59
-44.97
168.73
20
A
LEU
83
-73.83
-71.53
20
A
VAL
86
-61.45
88.91
20
A
HIS
87
179.74
49.24
20
A
ALA
88
-177.87
-176.98
20
A
PRO
93
-75.08
46.21
20
A
GLN
95
-117.91
-164.16
20
A
ARG
100
-88.26
36.27
20
A
PRO
125
-75.05
46.87
20
A
TRP
133
-62.24
-70.48
20
A
THR
148
-48.35
160.11
20
A
SER
149
-179.47
99.80
GAG POLYPROTEIN
STRUCTURE OF THE N-TERMINAL DOMAIN OF THE MATURE HIV-1 CAPSID PROTEIN
1
N
N
A
SER
16
A
SER
16
HELX_P
A
LYS
30
A
LYS
30
1
1
15
A
SER
33
A
SER
33
HELX_P
A
SER
44
A
SER
44
1
2
12
A
THR
48
A
THR
48
HELX_P
A
VAL
59
A
VAL
59
1
3
12
A
HIS
62
A
HIS
62
HELX_P
A
HIS
84
A
HIS
84
1
4
23
A
ARG
100
A
ARG
100
HELX_P
A
ALA
105
A
ALA
105
1
5
6
A
THR
110
A
THR
110
HELX_P
A
THR
119
A
THR
119
1
6
10
A
VAL
126
A
VAL
126
HELX_P
A
SER
146
A
SER
146
1
7
21
VIRAL PROTEIN
HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 CAPSID PROTEIN, AMIMO-TERMINAL CORE DOMAIN, HIV-1 CA-151, VIRUS CAPSID PROTEIN, VIRUS MATURATION, VIRAL PROTEIN
A
ASN
121
A
ASN
121
1
A
PRO
122
A
PRO
122
0.00
A
ASN
121
A
ASN
121
2
A
PRO
122
A
PRO
122
-0.02
A
ASN
121
A
ASN
121
3
A
PRO
122
A
PRO
122
-0.01
A
ASN
121
A
ASN
121
4
A
PRO
122
A
PRO
122
0.01
A
ASN
121
A
ASN
121
5
A
PRO
122
A
PRO
122
0.09
A
ASN
121
A
ASN
121
6
A
PRO
122
A
PRO
122
-0.04
A
ASN
121
A
ASN
121
7
A
PRO
122
A
PRO
122
-0.02
A
ASN
121
A
ASN
121
8
A
PRO
122
A
PRO
122
-0.02
A
ASN
121
A
ASN
121
9
A
PRO
122
A
PRO
122
-0.03
A
ASN
121
A
ASN
121
10
A
PRO
122
A
PRO
122
0.04
A
ASN
121
A
ASN
121
11
A
PRO
122
A
PRO
122
-0.04
A
ASN
121
A
ASN
121
12
A
PRO
122
A
PRO
122
-0.03
A
ASN
121
A
ASN
121
13
A
PRO
122
A
PRO
122
-0.02
A
ASN
121
A
ASN
121
14
A
PRO
122
A
PRO
122
-0.07
A
ASN
121
A
ASN
121
15
A
PRO
122
A
PRO
122
0.03
A
ASN
121
A
ASN
121
16
A
PRO
122
A
PRO
122
-0.06
A
ASN
121
A
ASN
121
17
A
PRO
122
A
PRO
122
0.07
A
ASN
121
A
ASN
121
18
A
PRO
122
A
PRO
122
-0.05
A
ASN
121
A
ASN
121
19
A
PRO
122
A
PRO
122
-0.10
A
ASN
121
A
ASN
121
20
A
PRO
122
A
PRO
122
0.00
GAG_HV1N5
UNP
1
P12493
132
282
1GWP
1
151
P12493
A
1
1
151
2
anti-parallel
A
PRO
1
A
PRO
1
A
ASN
5
A
ASN
5
A
GLN
9
A
GLN
9
A
GLN
13
A
GLN
13
1
P 1