0.026846 0.000000 0.000000 0.000000 0.015671 0.000000 0.000000 0.000000 0.014017 0.00000 0.00000 0.00000 Almrud, J. Kern, A. Wang, S. Czerwinski, R. Johnson, W. Murzin, A. Hackert, M. Whitman, C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 37.250 63.810 71.340 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Biochemistry BICHAW 0033 0006-2960 41 12010 10.1021/BI020271H 12356301 The Crystal Structure of Ydce, a 4-Oxalocrotonate Tautomerase Homologue from Escherichia Coli, Confirms the Structural Basis for Oligomer Diversity 2002 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 110.0 1 MIRRORS IMAGE PLATE 2001-12-15 MARRESEARCH SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 8550.729 HYPOTHETICAL PROTEIN YDCE 5.3.2.1 2 man polymer 18.015 water 151 nat water YDCE, B1461 no no PHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESWQAIWDAEIAPQMEALIKKPGYSMNA PHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESWQAIWDAEIAPQMEALIKKPGYSMNA A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n K12 sample 83333 ESCHERICHIA COLI 469008 ESCHERICHIA COLI BL21(DE3) PET24A+ 1 2.5 51 7.30 PROTEIN BUFFERED IN 50MM SODIUM PHOSPHATE, PH 7.3 PRECIPITANT: 40% SODIUM CITRATE PH 8.5 ITTING DROP: MIX 5UL PROT. WITH 5UL 40% SODIUM CITRATE repository Initial release Version format compliance Version format compliance 1 0 2002-10-10 1 1 2011-05-08 1 2 2011-07-13 THE CRYSTAL STRUCTURE OF YDCE, A 4- OXALOCROTONATE TAUTOMERASE HOMOLOGUE FROM ESCHERICHIA COLI, CONFIRMS THE STRUCTURAL BASIS FOR OLIGOMER DIVERSITY THE CRYSTAL STRUCTURE OF YDCE, A 4- OXALOCROTONATE TAUTOMERASE HOMOLOGUE FROM ESCHERICHIA COLI, CONFIRMS THE STRUCTURAL BASIS FOR OLIGOMER DIVERSITY PDBE Y PDBE 2002-04-23 REL HOH water HOH 2001 2 HOH HOH 2001 A HOH 2002 2 HOH HOH 2002 A HOH 2003 2 HOH HOH 2003 A HOH 2004 2 HOH HOH 2004 A HOH 2005 2 HOH HOH 2005 A HOH 2006 2 HOH HOH 2006 A HOH 2007 2 HOH HOH 2007 A HOH 2008 2 HOH HOH 2008 A HOH 2009 2 HOH HOH 2009 A HOH 2010 2 HOH HOH 2010 A HOH 2011 2 HOH HOH 2011 A HOH 2012 2 HOH HOH 2012 A HOH 2013 2 HOH HOH 2013 A HOH 2014 2 HOH HOH 2014 A HOH 2015 2 HOH HOH 2015 A HOH 2016 2 HOH HOH 2016 A HOH 2017 2 HOH HOH 2017 A HOH 2018 2 HOH HOH 2018 A HOH 2019 2 HOH HOH 2019 A HOH 2020 2 HOH HOH 2020 A HOH 2021 2 HOH HOH 2021 A HOH 2022 2 HOH HOH 2022 A HOH 2023 2 HOH HOH 2023 A HOH 2024 2 HOH HOH 2024 A HOH 2025 2 HOH HOH 2025 A HOH 2026 2 HOH HOH 2026 A HOH 2027 2 HOH HOH 2027 A HOH 2028 2 HOH HOH 2028 A HOH 2029 2 HOH HOH 2029 A HOH 2030 2 HOH HOH 2030 A HOH 2031 2 HOH HOH 2031 A HOH 2032 2 HOH HOH 2032 A HOH 2033 2 HOH HOH 2033 A HOH 2034 2 HOH HOH 2034 A HOH 2035 2 HOH HOH 2035 A HOH 2036 2 HOH HOH 2036 A HOH 2037 2 HOH HOH 2037 A HOH 2038 2 HOH HOH 2038 A HOH 2039 2 HOH HOH 2039 A HOH 2040 2 HOH HOH 2040 A HOH 2041 2 HOH HOH 2041 A HOH 2042 2 HOH HOH 2042 A HOH 2043 2 HOH HOH 2043 A HOH 2044 2 HOH HOH 2044 A HOH 2045 2 HOH HOH 2045 A HOH 2046 2 HOH HOH 2046 A HOH 2047 2 HOH HOH 2047 A HOH 2048 2 HOH HOH 2048 A HOH 2049 2 HOH HOH 2049 A HOH 2050 2 HOH HOH 2050 A HOH 2051 2 HOH HOH 2051 A HOH 2052 2 HOH HOH 2052 A HOH 2053 2 HOH HOH 2053 A HOH 2054 2 HOH HOH 2054 A HOH 2055 2 HOH HOH 2055 A HOH 2056 2 HOH HOH 2056 A HOH 2057 2 HOH HOH 2057 A HOH 2058 2 HOH HOH 2058 A HOH 2059 2 HOH HOH 2059 A HOH 2060 2 HOH HOH 2060 A HOH 2061 2 HOH HOH 2061 A HOH 2062 2 HOH HOH 2062 A HOH 2063 2 HOH HOH 2063 A HOH 2064 2 HOH HOH 2064 A HOH 2065 2 HOH HOH 2065 A HOH 2066 2 HOH HOH 2066 A HOH 2067 2 HOH HOH 2067 A HOH 2068 2 HOH HOH 2068 A HOH 2069 2 HOH HOH 2069 A HOH 2070 2 HOH HOH 2070 A HOH 2071 2 HOH HOH 2071 A HOH 2072 2 HOH HOH 2072 A HOH 2073 2 HOH HOH 2073 A HOH 2074 2 HOH HOH 2074 A HOH 2075 2 HOH HOH 2075 A HOH 2076 2 HOH HOH 2076 A HOH 2077 2 HOH HOH 2077 A HOH 2078 2 HOH HOH 2078 A HOH 2001 2 HOH HOH 2001 B HOH 2002 2 HOH HOH 2002 B HOH 2003 2 HOH HOH 2003 B HOH 2004 2 HOH HOH 2004 B HOH 2005 2 HOH HOH 2005 B HOH 2006 2 HOH HOH 2006 B HOH 2007 2 HOH HOH 2007 B HOH 2008 2 HOH HOH 2008 B HOH 2009 2 HOH HOH 2009 B HOH 2010 2 HOH HOH 2010 B HOH 2011 2 HOH HOH 2011 B HOH 2012 2 HOH HOH 2012 B HOH 2013 2 HOH HOH 2013 B HOH 2014 2 HOH HOH 2014 B HOH 2015 2 HOH HOH 2015 B HOH 2016 2 HOH HOH 2016 B HOH 2017 2 HOH HOH 2017 B HOH 2018 2 HOH HOH 2018 B HOH 2019 2 HOH HOH 2019 B HOH 2020 2 HOH HOH 2020 B HOH 2021 2 HOH HOH 2021 B HOH 2022 2 HOH HOH 2022 B HOH 2023 2 HOH HOH 2023 B HOH 2024 2 HOH HOH 2024 B HOH 2025 2 HOH HOH 2025 B HOH 2026 2 HOH HOH 2026 B HOH 2027 2 HOH HOH 2027 B HOH 2028 2 HOH HOH 2028 B HOH 2029 2 HOH HOH 2029 B HOH 2030 2 HOH HOH 2030 B HOH 2031 2 HOH HOH 2031 B HOH 2032 2 HOH HOH 2032 B HOH 2033 2 HOH HOH 2033 B HOH 2034 2 HOH HOH 2034 B HOH 2035 2 HOH HOH 2035 B HOH 2036 2 HOH HOH 2036 B HOH 2037 2 HOH HOH 2037 B HOH 2038 2 HOH HOH 2038 B HOH 2039 2 HOH HOH 2039 B HOH 2040 2 HOH HOH 2040 B HOH 2041 2 HOH HOH 2041 B HOH 2042 2 HOH HOH 2042 B HOH 2043 2 HOH HOH 2043 B HOH 2044 2 HOH HOH 2044 B HOH 2045 2 HOH HOH 2045 B HOH 2046 2 HOH HOH 2046 B HOH 2047 2 HOH HOH 2047 B HOH 2048 2 HOH HOH 2048 B HOH 2049 2 HOH HOH 2049 B HOH 2050 2 HOH HOH 2050 B HOH 2051 2 HOH HOH 2051 B HOH 2052 2 HOH HOH 2052 B HOH 2053 2 HOH HOH 2053 B HOH 2054 2 HOH HOH 2054 B HOH 2055 2 HOH HOH 2055 B HOH 2056 2 HOH HOH 2056 B HOH 2057 2 HOH HOH 2057 B HOH 2058 2 HOH HOH 2058 B HOH 2059 2 HOH HOH 2059 B HOH 2060 2 HOH HOH 2060 B HOH 2061 2 HOH HOH 2061 B HOH 2062 2 HOH HOH 2062 B HOH 2063 2 HOH HOH 2063 B HOH 2064 2 HOH HOH 2064 B HOH 2065 2 HOH HOH 2065 B HOH 2066 2 HOH HOH 2066 B HOH 2067 2 HOH HOH 2067 B HOH 2068 2 HOH HOH 2068 B HOH 2069 2 HOH HOH 2069 B HOH 2070 2 HOH HOH 2070 B HOH 2071 2 HOH HOH 2071 B HOH 2072 2 HOH HOH 2072 B HOH 2073 2 HOH HOH 2073 B PRO 1 n 1 PRO 1 A HIS 2 n 2 HIS 2 A ILE 3 n 3 ILE 3 A ASP 4 n 4 ASP 4 A ILE 5 n 5 ILE 5 A LYS 6 n 6 LYS 6 A CYS 7 n 7 CYS 7 A PHE 8 n 8 PHE 8 A PRO 9 n 9 PRO 9 A ARG 10 n 10 ARG 10 A GLU 11 n 11 GLU 11 A LEU 12 n 12 LEU 12 A ASP 13 n 13 ASP 13 A GLU 14 n 14 GLU 14 A GLN 15 n 15 GLN 15 A GLN 16 n 16 GLN 16 A LYS 17 n 17 LYS 17 A ALA 18 n 18 ALA 18 A ALA 19 n 19 ALA 19 A LEU 20 n 20 LEU 20 A ALA 21 n 21 ALA 21 A ALA 22 n 22 ALA 22 A ASP 23 n 23 ASP 23 A ILE 24 n 24 ILE 24 A THR 25 n 25 THR 25 A ASP 26 n 26 ASP 26 A VAL 27 n 27 VAL 27 A ILE 28 n 28 ILE 28 A ILE 29 n 29 ILE 29 A ARG 30 n 30 ARG 30 A HIS 31 n 31 HIS 31 A LEU 32 n 32 LEU 32 A ASN 33 n 33 ASN 33 A SER 34 n 34 SER 34 A LYS 35 n 35 LYS 35 A ASP 36 n 36 ASP 36 A SER 37 n 37 SER 37 A SER 38 n 38 SER 38 A ILE 39 n 39 ILE 39 A SER 40 n 40 SER 40 A ILE 41 n 41 ILE 41 A ALA 42 n 42 ALA 42 A LEU 43 n 43 LEU 43 A GLN 44 n 44 GLN 44 A GLN 45 n 45 GLN 45 A ILE 46 n 46 ILE 46 A GLN 47 n 47 GLN 47 A PRO 48 n 48 PRO 48 A GLU 49 n 49 GLU 49 A SER 50 n 50 SER 50 A TRP 51 n 51 TRP 51 A GLN 52 n 52 GLN 52 A ALA 53 n 53 ALA 53 A ILE 54 n 54 ILE 54 A TRP 55 n 55 TRP 55 A ASP 56 n 56 ASP 56 A ALA 57 n 57 ALA 57 A GLU 58 n 58 GLU 58 A ILE 59 n 59 ILE 59 A ALA 60 n 60 ALA 60 A PRO 61 n 61 PRO 61 A GLN 62 n 62 GLN 62 A MET 63 n 63 MET 63 A GLU 64 n 64 GLU 64 A ALA 65 n 65 ALA 65 A LEU 66 n 66 LEU 66 A ILE 67 n 67 ILE 67 A LYS 68 n 68 LYS 68 A LYS 69 n 69 LYS 69 A PRO 70 n 70 PRO 70 A GLY 71 n 71 GLY 71 A TYR 72 n 72 TYR 72 A SER 73 n 73 SER 73 A MET 74 n 74 MET 74 A ASN 75 n 75 ASN 75 A ALA 76 n 76 ALA 76 A PRO 1 n 1 PRO 1 B HIS 2 n 2 HIS 2 B ILE 3 n 3 ILE 3 B ASP 4 n 4 ASP 4 B ILE 5 n 5 ILE 5 B LYS 6 n 6 LYS 6 B CYS 7 n 7 CYS 7 B PHE 8 n 8 PHE 8 B PRO 9 n 9 PRO 9 B ARG 10 n 10 ARG 10 B GLU 11 n 11 GLU 11 B LEU 12 n 12 LEU 12 B ASP 13 n 13 ASP 13 B GLU 14 n 14 GLU 14 B GLN 15 n 15 GLN 15 B GLN 16 n 16 GLN 16 B LYS 17 n 17 LYS 17 B ALA 18 n 18 ALA 18 B ALA 19 n 19 ALA 19 B LEU 20 n 20 LEU 20 B ALA 21 n 21 ALA 21 B ALA 22 n 22 ALA 22 B ASP 23 n 23 ASP 23 B ILE 24 n 24 ILE 24 B THR 25 n 25 THR 25 B ASP 26 n 26 ASP 26 B VAL 27 n 27 VAL 27 B ILE 28 n 28 ILE 28 B ILE 29 n 29 ILE 29 B ARG 30 n 30 ARG 30 B HIS 31 n 31 HIS 31 B LEU 32 n 32 LEU 32 B ASN 33 n 33 ASN 33 B SER 34 n 34 SER 34 B LYS 35 n 35 LYS 35 B ASP 36 n 36 ASP 36 B SER 37 n 37 SER 37 B SER 38 n 38 SER 38 B ILE 39 n 39 ILE 39 B SER 40 n 40 SER 40 B ILE 41 n 41 ILE 41 B ALA 42 n 42 ALA 42 B LEU 43 n 43 LEU 43 B GLN 44 n 44 GLN 44 B GLN 45 n 45 GLN 45 B ILE 46 n 46 ILE 46 B GLN 47 n 47 GLN 47 B PRO 48 n 48 PRO 48 B GLU 49 n 49 GLU 49 B SER 50 n 50 SER 50 B TRP 51 n 51 TRP 51 B GLN 52 n 52 GLN 52 B ALA 53 n 53 ALA 53 B ILE 54 n 54 ILE 54 B TRP 55 n 55 TRP 55 B ASP 56 n 56 ASP 56 B ALA 57 n 57 ALA 57 B GLU 58 n 58 GLU 58 B ILE 59 n 59 ILE 59 B ALA 60 n 60 ALA 60 B PRO 61 n 61 PRO 61 B GLN 62 n 62 GLN 62 B MET 63 n 63 MET 63 B GLU 64 n 64 GLU 64 B ALA 65 n 65 ALA 65 B LEU 66 n 66 LEU 66 B ILE 67 n 67 ILE 67 B LYS 68 n 68 LYS 68 B LYS 69 n 69 LYS 69 B PRO 70 n 70 PRO 70 B GLY 71 n 71 GLY 71 B TYR 72 n 72 TYR 72 B SER 73 n 73 SER 73 B MET 74 n 74 MET 74 B ASN 75 n 75 ASN 75 B ALA 76 n 76 ALA 76 B author_and_software_defined_assembly PQS 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ALA 42 A N ALA 42 A O ILE 3 A O ILE 3 A N LYS 6 A N LYS 6 B O HIS 2 B O HIS 2 B N ILE 3 B N ILE 3 B O SER 40 B O SER 40 1 A TYR 72 -58.58 -175.44 1 B GLU 58 -132.61 -46.75 25.5 -4.620 0.000 0.000 -1.586 0.000 6.206 0.262 0.225 0.225 2.1 30.0 491 10344 4.7 99.7 RANDOM 1 THROUGHOUT 2.0 MOLECULAR REPLACEMENT UNPUBLISHED 1.35 ANG. RES. YDCE STRUCTURE DETERMINED BY MIR COMBINATION 2.1 30.0 151 1351 0 0 1200 0.007 1.42 1 UNRESTRAINED 1 X-RAY DIFFRACTION 0.329 0.302 2.18 50 1017 9 4.7 99.1 27.1 2.100 30.000 1GYJ 10344 3.000 0.09200 1 11.5000 16.000 99.7 0.40800 2.10 2.18 3.000 1 10.00 99.1 refinement CNS 1.0 data reduction DENZO data scaling SCALEPACK phasing MOLREP HYPOTHETICAL PROTEIN YDCE (E.C.5.3.2.1) The Crystal Structure of YdcE, a 4-Oxalocrotonate Tautomerase Homologue from Escherichia coli, Confirms the Structural Basis for Oligomer Diversity 1 N N 1 N N 2 N N 2 N N A ASP 13 A ASP 13 HELX_P A ASN 33 A ASN 33 1 1 21 A LYS 35 A LYS 35 HELX_P A ILE 39 A ILE 39 5 2 5 A SER 50 A SER 50 HELX_P A GLU 58 A GLU 58 1 3 9 A ILE 59 A ILE 59 HELX_P A MET 63 A MET 63 5 4 5 B ASP 13 B ASP 13 HELX_P B ASN 33 B ASN 33 1 5 21 B GLN 47 B GLN 47 HELX_P B GLU 58 B GLU 58 1 6 12 B ILE 59 B ILE 59 HELX_P B LEU 66 B LEU 66 5 7 8 ISOMERASE TAUTOMERASE, ISOMERASE, HYPOTHETICAL PROTEIN given 0.161249 -0.963495 0.213719 -0.961701 -0.202037 -0.185234 0.221652 -0.175665 -0.959173 -2.40497 6.35961 40.75565 YDCE_ECOLI UNP 1 P31992 2 77 1GYJ 1 76 P31992 A 1 1 76 2 77 1GYJ 1 76 P31992 B 1 1 76 4 parallel anti-parallel parallel A SER 40 A SER 40 A GLN 45 A GLN 45 A HIS 2 A HIS 2 A CYS 7 A CYS 7 B HIS 2 B HIS 2 B CYS 7 B CYS 7 B SER 40 B SER 40 B GLN 45 B GLN 45 19 P 21 21 21