0.011070
0.000000
0.000000
0.000000
0.011070
0.000000
0.000000
0.000000
0.007042
0.00000
0.00000
0.00000
Zhang, X.
Danpure, C.J.
Roe, S.M.
Pearl, L.H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
90.330
90.330
142.010
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C2 H5 N O3
91.066
(AMINOOXY)ACETIC ACID
non-polymer
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C8 H10 N O6 P
247.142
PYRIDOXAL-5'-PHOSPHATE
VITAMIN B6 Phosphate
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
331
643
10.1016/S0022-2836(03)00791-5
12899834
Crystal Structure of Alanine:Glyoxylate Aminotransferase and the Relationship between Genotype and Enzymatic Phenotype in Primary Hyperoxaluria Type 1.
2003
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
CCD
2002-01-15
ADSC CCD
SINGLE WAVELENGTH
M
x-ray
1
0.9330
1.0
ID14-2
ESRF
0.9330
SYNCHROTRON
ESRF BEAMLINE ID14-2
LYSINE - PYRIDOXAL PHOSPHATE AT A 209
43062.840
SERINE--GLYOXYLATE AMINOTRANSFERASE
2.6.1.44, 2.6.1.51
1
man
polymer
247.142
PYRIDOXAL-5'-PHOSPHATE
1
syn
non-polymer
91.066
(AMINOOXY)ACETIC ACID
1
syn
non-polymer
92.094
GLYCEROL
6
syn
non-polymer
18.015
water
143
nat
water
AGT, SPT, ALANINE--GLYOXYLATE AMINOTRANSFERASE
no
no
MASHKLLVTPPKALLKPLSIPNQLLLGPGPSNLPPRIMAAGGLQMIGSMSKDMYQIMDEIKEGIQYVFQTRNPLTLVISG
SGHCALEAALVNVLEPGDSFLVGANGIWGQRAVDIGERIGARVHPMTKDPGGHYTLQEVEEGLAQHKPVLLFLTHGESST
GVLQPLDGFGELCHRYKCLLLVDSVASLGGTPLYMDRQGIDILYSGSQKALNAPPGTSLISFSDKAKKKMYSRKTKPFSF
YLDIKWLANFWGCDDQPRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQALGLQLFVKDPALRLPT
VTTVAVPAGYDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLGCNATRENVDRVTEALRAALQHCPKKKL
MASHKLLVTPPKALLKPLSIPNQLLLGPGPSNLPPRIMAAGGLQMIGSMSKDMYQIMDEIKEGIQYVFQTRNPLTLVISG
SGHCALEAALVNVLEPGDSFLVGANGIWGQRAVDIGERIGARVHPMTKDPGGHYTLQEVEEGLAQHKPVLLFLTHGESST
GVLQPLDGFGELCHRYKCLLLVDSVASLGGTPLYMDRQGIDILYSGSQKALNAPPGTSLISFSDKAKKKMYSRKTKPFSF
YLDIKWLANFWGCDDQPRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRLQALGLQLFVKDPALRLPT
VTTVAVPAGYDWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLGCNATRENVDRVTEALRAALQHCPKKKL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HUMAN
sample
9606
HOMO SAPIENS
562
ESCHERICHIA COLI
JM109
1
2.39
58.1
MICROBATCH
7.50
CRYSTALS WERE GROWN BY THE MICROBATCH METHOD. 1UL OF PROTEIN SOLUTION (15MG/ML ) WAS ADDED TO 1UL OF PRECIPITANT (2.5% (V/V) 2-PROPANOL, 10% PEG4K, 0.1M NAHEPES PH 7.5).
exptl_crystal_grow
pdbx_database_proc
pdbx_database_status
struct_biol
struct_conn
repository
Initial release
Derived calculations
Non-polymer description
Other
Refinement description
Structure summary
Version format compliance
Data collection
Derived calculations
Experimental preparation
Other
1
0
2003-06-12
1
1
2011-10-12
1
2
2019-05-08
_exptl_crystal_grow.method
_pdbx_database_status.recvd_author_approval
_struct_conn.pdbx_leaving_atom_flag
PDBE
Y
PDBE
2002-06-17
REL
PLP
PYRIDOXAL-5'-PHOSPHATE
AOA
(AMINOOXY)ACETIC ACID
GOL
GLYCEROL
HOH
water
ACTIVITY: L-SERINE + PYRUVATE = 3-HYDROXYPYRUVATE + L-
ALANINE.
ACTIVITY: L-ALANINE + GLYOXYLATE = PYRUVATE + GLYCINE.
PLP
1391
2
PLP
PLP
1391
A
AOA
1392
3
AOA
AOA
1392
A
GOL
1393
4
GOL
GOL
1393
A
GOL
1394
4
GOL
GOL
1394
A
GOL
1395
4
GOL
GOL
1395
A
GOL
1396
4
GOL
GOL
1396
A
GOL
1397
4
GOL
GOL
1397
A
GOL
1398
4
GOL
GOL
1398
A
HOH
2001
5
HOH
HOH
2001
A
HOH
2002
5
HOH
HOH
2002
A
HOH
2003
5
HOH
HOH
2003
A
HOH
2004
5
HOH
HOH
2004
A
HOH
2005
5
HOH
HOH
2005
A
HOH
2006
5
HOH
HOH
2006
A
HOH
2007
5
HOH
HOH
2007
A
HOH
2008
5
HOH
HOH
2008
A
HOH
2009
5
HOH
HOH
2009
A
HOH
2010
5
HOH
HOH
2010
A
HOH
2011
5
HOH
HOH
2011
A
HOH
2012
5
HOH
HOH
2012
A
HOH
2013
5
HOH
HOH
2013
A
HOH
2014
5
HOH
HOH
2014
A
HOH
2015
5
HOH
HOH
2015
A
HOH
2016
5
HOH
HOH
2016
A
HOH
2017
5
HOH
HOH
2017
A
HOH
2018
5
HOH
HOH
2018
A
HOH
2019
5
HOH
HOH
2019
A
HOH
2020
5
HOH
HOH
2020
A
HOH
2021
5
HOH
HOH
2021
A
HOH
2022
5
HOH
HOH
2022
A
HOH
2023
5
HOH
HOH
2023
A
HOH
2024
5
HOH
HOH
2024
A
HOH
2025
5
HOH
HOH
2025
A
HOH
2026
5
HOH
HOH
2026
A
HOH
2027
5
HOH
HOH
2027
A
HOH
2028
5
HOH
HOH
2028
A
HOH
2029
5
HOH
HOH
2029
A
HOH
2030
5
HOH
HOH
2030
A
HOH
2031
5
HOH
HOH
2031
A
HOH
2032
5
HOH
HOH
2032
A
HOH
2033
5
HOH
HOH
2033
A
HOH
2034
5
HOH
HOH
2034
A
HOH
2035
5
HOH
HOH
2035
A
HOH
2036
5
HOH
HOH
2036
A
HOH
2037
5
HOH
HOH
2037
A
HOH
2038
5
HOH
HOH
2038
A
HOH
2039
5
HOH
HOH
2039
A
HOH
2040
5
HOH
HOH
2040
A
HOH
2041
5
HOH
HOH
2041
A
HOH
2042
5
HOH
HOH
2042
A
HOH
2043
5
HOH
HOH
2043
A
HOH
2044
5
HOH
HOH
2044
A
HOH
2045
5
HOH
HOH
2045
A
HOH
2046
5
HOH
HOH
2046
A
HOH
2047
5
HOH
HOH
2047
A
HOH
2048
5
HOH
HOH
2048
A
HOH
2049
5
HOH
HOH
2049
A
HOH
2050
5
HOH
HOH
2050
A
HOH
2051
5
HOH
HOH
2051
A
HOH
2052
5
HOH
HOH
2052
A
HOH
2053
5
HOH
HOH
2053
A
HOH
2054
5
HOH
HOH
2054
A
HOH
2055
5
HOH
HOH
2055
A
HOH
2056
5
HOH
HOH
2056
A
HOH
2057
5
HOH
HOH
2057
A
HOH
2058
5
HOH
HOH
2058
A
HOH
2059
5
HOH
HOH
2059
A
HOH
2060
5
HOH
HOH
2060
A
HOH
2061
5
HOH
HOH
2061
A
HOH
2062
5
HOH
HOH
2062
A
HOH
2063
5
HOH
HOH
2063
A
HOH
2064
5
HOH
HOH
2064
A
HOH
2065
5
HOH
HOH
2065
A
HOH
2066
5
HOH
HOH
2066
A
HOH
2067
5
HOH
HOH
2067
A
HOH
2068
5
HOH
HOH
2068
A
HOH
2069
5
HOH
HOH
2069
A
HOH
2070
5
HOH
HOH
2070
A
HOH
2071
5
HOH
HOH
2071
A
HOH
2072
5
HOH
HOH
2072
A
HOH
2073
5
HOH
HOH
2073
A
HOH
2074
5
HOH
HOH
2074
A
HOH
2075
5
HOH
HOH
2075
A
HOH
2076
5
HOH
HOH
2076
A
HOH
2077
5
HOH
HOH
2077
A
HOH
2078
5
HOH
HOH
2078
A
HOH
2079
5
HOH
HOH
2079
A
HOH
2080
5
HOH
HOH
2080
A
HOH
2081
5
HOH
HOH
2081
A
HOH
2082
5
HOH
HOH
2082
A
HOH
2083
5
HOH
HOH
2083
A
HOH
2084
5
HOH
HOH
2084
A
HOH
2085
5
HOH
HOH
2085
A
HOH
2086
5
HOH
HOH
2086
A
HOH
2087
5
HOH
HOH
2087
A
HOH
2088
5
HOH
HOH
2088
A
HOH
2089
5
HOH
HOH
2089
A
HOH
2090
5
HOH
HOH
2090
A
HOH
2091
5
HOH
HOH
2091
A
HOH
2092
5
HOH
HOH
2092
A
HOH
2093
5
HOH
HOH
2093
A
HOH
2094
5
HOH
HOH
2094
A
HOH
2095
5
HOH
HOH
2095
A
HOH
2096
5
HOH
HOH
2096
A
HOH
2097
5
HOH
HOH
2097
A
HOH
2098
5
HOH
HOH
2098
A
HOH
2099
5
HOH
HOH
2099
A
HOH
2100
5
HOH
HOH
2100
A
HOH
2101
5
HOH
HOH
2101
A
HOH
2102
5
HOH
HOH
2102
A
HOH
2103
5
HOH
HOH
2103
A
HOH
2104
5
HOH
HOH
2104
A
HOH
2105
5
HOH
HOH
2105
A
HOH
2106
5
HOH
HOH
2106
A
HOH
2107
5
HOH
HOH
2107
A
HOH
2108
5
HOH
HOH
2108
A
HOH
2109
5
HOH
HOH
2109
A
HOH
2110
5
HOH
HOH
2110
A
HOH
2111
5
HOH
HOH
2111
A
HOH
2112
5
HOH
HOH
2112
A
HOH
2113
5
HOH
HOH
2113
A
HOH
2114
5
HOH
HOH
2114
A
HOH
2115
5
HOH
HOH
2115
A
HOH
2116
5
HOH
HOH
2116
A
HOH
2117
5
HOH
HOH
2117
A
HOH
2118
5
HOH
HOH
2118
A
HOH
2119
5
HOH
HOH
2119
A
HOH
2120
5
HOH
HOH
2120
A
HOH
2121
5
HOH
HOH
2121
A
HOH
2122
5
HOH
HOH
2122
A
HOH
2123
5
HOH
HOH
2123
A
HOH
2124
5
HOH
HOH
2124
A
HOH
2125
5
HOH
HOH
2125
A
HOH
2126
5
HOH
HOH
2126
A
HOH
2127
5
HOH
HOH
2127
A
HOH
2128
5
HOH
HOH
2128
A
HOH
2129
5
HOH
HOH
2129
A
HOH
2130
5
HOH
HOH
2130
A
HOH
2131
5
HOH
HOH
2131
A
HOH
2132
5
HOH
HOH
2132
A
HOH
2133
5
HOH
HOH
2133
A
HOH
2134
5
HOH
HOH
2134
A
HOH
2135
5
HOH
HOH
2135
A
HOH
2136
5
HOH
HOH
2136
A
HOH
2137
5
HOH
HOH
2137
A
HOH
2138
5
HOH
HOH
2138
A
HOH
2139
5
HOH
HOH
2139
A
HOH
2140
5
HOH
HOH
2140
A
HOH
2141
5
HOH
HOH
2141
A
HOH
2142
5
HOH
HOH
2142
A
HOH
2143
5
HOH
HOH
2143
A
n
1
1
A
n
2
2
A
n
3
3
A
HIS
4
n
4
HIS
4
A
LYS
5
n
5
LYS
5
A
LEU
6
n
6
LEU
6
A
LEU
7
n
7
LEU
7
A
VAL
8
n
8
VAL
8
A
THR
9
n
9
THR
9
A
PRO
10
n
10
PRO
10
A
PRO
11
n
11
PRO
11
A
LYS
12
n
12
LYS
12
A
ALA
13
n
13
ALA
13
A
LEU
14
n
14
LEU
14
A
LEU
15
n
15
LEU
15
A
LYS
16
n
16
LYS
16
A
PRO
17
n
17
PRO
17
A
LEU
18
n
18
LEU
18
A
SER
19
n
19
SER
19
A
ILE
20
n
20
ILE
20
A
PRO
21
n
21
PRO
21
A
ASN
22
n
22
ASN
22
A
GLN
23
n
23
GLN
23
A
LEU
24
n
24
LEU
24
A
LEU
25
n
25
LEU
25
A
LEU
26
n
26
LEU
26
A
GLY
27
n
27
GLY
27
A
PRO
28
n
28
PRO
28
A
GLY
29
n
29
GLY
29
A
PRO
30
n
30
PRO
30
A
SER
31
n
31
SER
31
A
ASN
32
n
32
ASN
32
A
LEU
33
n
33
LEU
33
A
PRO
34
n
34
PRO
34
A
PRO
35
n
35
PRO
35
A
ARG
36
n
36
ARG
36
A
ILE
37
n
37
ILE
37
A
MET
38
n
38
MET
38
A
ALA
39
n
39
ALA
39
A
ALA
40
n
40
ALA
40
A
GLY
41
n
41
GLY
41
A
GLY
42
n
42
GLY
42
A
LEU
43
n
43
LEU
43
A
GLN
44
n
44
GLN
44
A
MET
45
n
45
MET
45
A
ILE
46
n
46
ILE
46
A
GLY
47
n
47
GLY
47
A
SER
48
n
48
SER
48
A
MET
49
n
49
MET
49
A
SER
50
n
50
SER
50
A
LYS
51
n
51
LYS
51
A
ASP
52
n
52
ASP
52
A
MET
53
n
53
MET
53
A
TYR
54
n
54
TYR
54
A
GLN
55
n
55
GLN
55
A
ILE
56
n
56
ILE
56
A
MET
57
n
57
MET
57
A
ASP
58
n
58
ASP
58
A
GLU
59
n
59
GLU
59
A
ILE
60
n
60
ILE
60
A
LYS
61
n
61
LYS
61
A
GLU
62
n
62
GLU
62
A
GLY
63
n
63
GLY
63
A
ILE
64
n
64
ILE
64
A
GLN
65
n
65
GLN
65
A
TYR
66
n
66
TYR
66
A
VAL
67
n
67
VAL
67
A
PHE
68
n
68
PHE
68
A
GLN
69
n
69
GLN
69
A
THR
70
n
70
THR
70
A
ARG
71
n
71
ARG
71
A
ASN
72
n
72
ASN
72
A
PRO
73
n
73
PRO
73
A
LEU
74
n
74
LEU
74
A
THR
75
n
75
THR
75
A
LEU
76
n
76
LEU
76
A
VAL
77
n
77
VAL
77
A
ILE
78
n
78
ILE
78
A
SER
79
n
79
SER
79
A
GLY
80
n
80
GLY
80
A
SER
81
n
81
SER
81
A
GLY
82
n
82
GLY
82
A
HIS
83
n
83
HIS
83
A
CYS
84
n
84
CYS
84
A
ALA
85
n
85
ALA
85
A
LEU
86
n
86
LEU
86
A
GLU
87
n
87
GLU
87
A
ALA
88
n
88
ALA
88
A
ALA
89
n
89
ALA
89
A
LEU
90
n
90
LEU
90
A
VAL
91
n
91
VAL
91
A
ASN
92
n
92
ASN
92
A
VAL
93
n
93
VAL
93
A
LEU
94
n
94
LEU
94
A
GLU
95
n
95
GLU
95
A
PRO
96
n
96
PRO
96
A
GLY
97
n
97
GLY
97
A
ASP
98
n
98
ASP
98
A
SER
99
n
99
SER
99
A
PHE
100
n
100
PHE
100
A
LEU
101
n
101
LEU
101
A
VAL
102
n
102
VAL
102
A
GLY
103
n
103
GLY
103
A
ALA
104
n
104
ALA
104
A
ASN
105
n
105
ASN
105
A
GLY
106
n
106
GLY
106
A
ILE
107
n
107
ILE
107
A
TRP
108
n
108
TRP
108
A
GLY
109
n
109
GLY
109
A
GLN
110
n
110
GLN
110
A
ARG
111
n
111
ARG
111
A
ALA
112
n
112
ALA
112
A
VAL
113
n
113
VAL
113
A
ASP
114
n
114
ASP
114
A
ILE
115
n
115
ILE
115
A
GLY
116
n
116
GLY
116
A
GLU
117
n
117
GLU
117
A
ARG
118
n
118
ARG
118
A
ILE
119
n
119
ILE
119
A
GLY
120
n
120
GLY
120
A
n
121
121
A
n
122
122
A
VAL
123
n
123
VAL
123
A
HIS
124
n
124
HIS
124
A
PRO
125
n
125
PRO
125
A
MET
126
n
126
MET
126
A
THR
127
n
127
THR
127
A
LYS
128
n
128
LYS
128
A
ASP
129
n
129
ASP
129
A
PRO
130
n
130
PRO
130
A
GLY
131
n
131
GLY
131
A
GLY
132
n
132
GLY
132
A
HIS
133
n
133
HIS
133
A
TYR
134
n
134
TYR
134
A
THR
135
n
135
THR
135
A
LEU
136
n
136
LEU
136
A
GLN
137
n
137
GLN
137
A
GLU
138
n
138
GLU
138
A
VAL
139
n
139
VAL
139
A
GLU
140
n
140
GLU
140
A
GLU
141
n
141
GLU
141
A
GLY
142
n
142
GLY
142
A
LEU
143
n
143
LEU
143
A
ALA
144
n
144
ALA
144
A
GLN
145
n
145
GLN
145
A
HIS
146
n
146
HIS
146
A
LYS
147
n
147
LYS
147
A
PRO
148
n
148
PRO
148
A
VAL
149
n
149
VAL
149
A
LEU
150
n
150
LEU
150
A
LEU
151
n
151
LEU
151
A
PHE
152
n
152
PHE
152
A
LEU
153
n
153
LEU
153
A
THR
154
n
154
THR
154
A
HIS
155
n
155
HIS
155
A
GLY
156
n
156
GLY
156
A
GLU
157
n
157
GLU
157
A
SER
158
n
158
SER
158
A
SER
159
n
159
SER
159
A
THR
160
n
160
THR
160
A
GLY
161
n
161
GLY
161
A
VAL
162
n
162
VAL
162
A
LEU
163
n
163
LEU
163
A
GLN
164
n
164
GLN
164
A
PRO
165
n
165
PRO
165
A
LEU
166
n
166
LEU
166
A
ASP
167
n
167
ASP
167
A
GLY
168
n
168
GLY
168
A
PHE
169
n
169
PHE
169
A
GLY
170
n
170
GLY
170
A
GLU
171
n
171
GLU
171
A
LEU
172
n
172
LEU
172
A
CYS
173
n
173
CYS
173
A
HIS
174
n
174
HIS
174
A
ARG
175
n
175
ARG
175
A
TYR
176
n
176
TYR
176
A
LYS
177
n
177
LYS
177
A
CYS
178
n
178
CYS
178
A
LEU
179
n
179
LEU
179
A
LEU
180
n
180
LEU
180
A
LEU
181
n
181
LEU
181
A
VAL
182
n
182
VAL
182
A
ASP
183
n
183
ASP
183
A
SER
184
n
184
SER
184
A
VAL
185
n
185
VAL
185
A
ALA
186
n
186
ALA
186
A
SER
187
n
187
SER
187
A
LEU
188
n
188
LEU
188
A
GLY
189
n
189
GLY
189
A
GLY
190
n
190
GLY
190
A
THR
191
n
191
THR
191
A
PRO
192
n
192
PRO
192
A
LEU
193
n
193
LEU
193
A
TYR
194
n
194
TYR
194
A
MET
195
n
195
MET
195
A
ASP
196
n
196
ASP
196
A
ARG
197
n
197
ARG
197
A
GLN
198
n
198
GLN
198
A
GLY
199
n
199
GLY
199
A
ILE
200
n
200
ILE
200
A
ASP
201
n
201
ASP
201
A
ILE
202
n
202
ILE
202
A
LEU
203
n
203
LEU
203
A
TYR
204
n
204
TYR
204
A
SER
205
n
205
SER
205
A
GLY
206
n
206
GLY
206
A
SER
207
n
207
SER
207
A
GLN
208
n
208
GLN
208
A
LYS
209
n
209
LYS
209
A
ALA
210
n
210
ALA
210
A
LEU
211
n
211
LEU
211
A
ASN
212
n
212
ASN
212
A
ALA
213
n
213
ALA
213
A
PRO
214
n
214
PRO
214
A
PRO
215
n
215
PRO
215
A
GLY
216
n
216
GLY
216
A
THR
217
n
217
THR
217
A
SER
218
n
218
SER
218
A
LEU
219
n
219
LEU
219
A
ILE
220
n
220
ILE
220
A
SER
221
n
221
SER
221
A
PHE
222
n
222
PHE
222
A
SER
223
n
223
SER
223
A
ASP
224
n
224
ASP
224
A
LYS
225
n
225
LYS
225
A
ALA
226
n
226
ALA
226
A
LYS
227
n
227
LYS
227
A
LYS
228
n
228
LYS
228
A
LYS
229
n
229
LYS
229
A
MET
230
n
230
MET
230
A
TYR
231
n
231
TYR
231
A
SER
232
n
232
SER
232
A
ARG
233
n
233
ARG
233
A
LYS
234
n
234
LYS
234
A
THR
235
n
235
THR
235
A
LYS
236
n
236
LYS
236
A
PRO
237
n
237
PRO
237
A
PHE
238
n
238
PHE
238
A
SER
239
n
239
SER
239
A
PHE
240
n
240
PHE
240
A
TYR
241
n
241
TYR
241
A
LEU
242
n
242
LEU
242
A
ASP
243
n
243
ASP
243
A
ILE
244
n
244
ILE
244
A
LYS
245
n
245
LYS
245
A
TRP
246
n
246
TRP
246
A
LEU
247
n
247
LEU
247
A
ALA
248
n
248
ALA
248
A
ASN
249
n
249
ASN
249
A
PHE
250
n
250
PHE
250
A
TRP
251
n
251
TRP
251
A
GLY
252
n
252
GLY
252
A
CYS
253
n
253
CYS
253
A
ASP
254
n
254
ASP
254
A
ASP
255
n
255
ASP
255
A
GLN
256
n
256
GLN
256
A
PRO
257
n
257
PRO
257
A
ARG
258
n
258
ARG
258
A
MET
259
n
259
MET
259
A
TYR
260
n
260
TYR
260
A
HIS
261
n
261
HIS
261
A
HIS
262
n
262
HIS
262
A
THR
263
n
263
THR
263
A
ILE
264
n
264
ILE
264
A
PRO
265
n
265
PRO
265
A
VAL
266
n
266
VAL
266
A
ILE
267
n
267
ILE
267
A
SER
268
n
268
SER
268
A
LEU
269
n
269
LEU
269
A
TYR
270
n
270
TYR
270
A
SER
271
n
271
SER
271
A
LEU
272
n
272
LEU
272
A
ARG
273
n
273
ARG
273
A
GLU
274
n
274
GLU
274
A
SER
275
n
275
SER
275
A
LEU
276
n
276
LEU
276
A
ALA
277
n
277
ALA
277
A
LEU
278
n
278
LEU
278
A
ILE
279
n
279
ILE
279
A
ALA
280
n
280
ALA
280
A
GLU
281
n
281
GLU
281
A
GLN
282
n
282
GLN
282
A
GLY
283
n
283
GLY
283
A
LEU
284
n
284
LEU
284
A
GLU
285
n
285
GLU
285
A
ASN
286
n
286
ASN
286
A
SER
287
n
287
SER
287
A
TRP
288
n
288
TRP
288
A
ARG
289
n
289
ARG
289
A
GLN
290
n
290
GLN
290
A
HIS
291
n
291
HIS
291
A
ARG
292
n
292
ARG
292
A
GLU
293
n
293
GLU
293
A
ALA
294
n
294
ALA
294
A
ALA
295
n
295
ALA
295
A
ALA
296
n
296
ALA
296
A
TYR
297
n
297
TYR
297
A
LEU
298
n
298
LEU
298
A
HIS
299
n
299
HIS
299
A
GLY
300
n
300
GLY
300
A
ARG
301
n
301
ARG
301
A
LEU
302
n
302
LEU
302
A
GLN
303
n
303
GLN
303
A
ALA
304
n
304
ALA
304
A
LEU
305
n
305
LEU
305
A
GLY
306
n
306
GLY
306
A
LEU
307
n
307
LEU
307
A
GLN
308
n
308
GLN
308
A
LEU
309
n
309
LEU
309
A
PHE
310
n
310
PHE
310
A
VAL
311
n
311
VAL
311
A
LYS
312
n
312
LYS
312
A
ASP
313
n
313
ASP
313
A
PRO
314
n
314
PRO
314
A
ALA
315
n
315
ALA
315
A
LEU
316
n
316
LEU
316
A
ARG
317
n
317
ARG
317
A
LEU
318
n
318
LEU
318
A
PRO
319
n
319
PRO
319
A
THR
320
n
320
THR
320
A
VAL
321
n
321
VAL
321
A
THR
322
n
322
THR
322
A
THR
323
n
323
THR
323
A
VAL
324
n
324
VAL
324
A
ALA
325
n
325
ALA
325
A
VAL
326
n
326
VAL
326
A
PRO
327
n
327
PRO
327
A
ALA
328
n
328
ALA
328
A
GLY
329
n
329
GLY
329
A
TYR
330
n
330
TYR
330
A
ASP
331
n
331
ASP
331
A
TRP
332
n
332
TRP
332
A
ARG
333
n
333
ARG
333
A
ASP
334
n
334
ASP
334
A
ILE
335
n
335
ILE
335
A
VAL
336
n
336
VAL
336
A
SER
337
n
337
SER
337
A
TYR
338
n
338
TYR
338
A
VAL
339
n
339
VAL
339
A
ILE
340
n
340
ILE
340
A
ASP
341
n
341
ASP
341
A
HIS
342
n
342
HIS
342
A
PHE
343
n
343
PHE
343
A
ASP
344
n
344
ASP
344
A
ILE
345
n
345
ILE
345
A
GLU
346
n
346
GLU
346
A
ILE
347
n
347
ILE
347
A
MET
348
n
348
MET
348
A
GLY
349
n
349
GLY
349
A
GLY
350
n
350
GLY
350
A
LEU
351
n
351
LEU
351
A
GLY
352
n
352
GLY
352
A
PRO
353
n
353
PRO
353
A
SER
354
n
354
SER
354
A
THR
355
n
355
THR
355
A
GLY
356
n
356
GLY
356
A
LYS
357
n
357
LYS
357
A
VAL
358
n
358
VAL
358
A
LEU
359
n
359
LEU
359
A
ARG
360
n
360
ARG
360
A
ILE
361
n
361
ILE
361
A
GLY
362
n
362
GLY
362
A
LEU
363
n
363
LEU
363
A
LEU
364
n
364
LEU
364
A
GLY
365
n
365
GLY
365
A
CYS
366
n
366
CYS
366
A
ASN
367
n
367
ASN
367
A
ALA
368
n
368
ALA
368
A
THR
369
n
369
THR
369
A
ARG
370
n
370
ARG
370
A
GLU
371
n
371
GLU
371
A
ASN
372
n
372
ASN
372
A
VAL
373
n
373
VAL
373
A
ASP
374
n
374
ASP
374
A
ARG
375
n
375
ARG
375
A
VAL
376
n
376
VAL
376
A
THR
377
n
377
THR
377
A
GLU
378
n
378
GLU
378
A
ALA
379
n
379
ALA
379
A
LEU
380
n
380
LEU
380
A
ARG
381
n
381
ARG
381
A
ALA
382
n
382
ALA
382
A
ALA
383
n
383
ALA
383
A
LEU
384
n
384
LEU
384
A
GLN
385
n
385
GLN
385
A
HIS
386
n
386
HIS
386
A
CYS
387
n
387
CYS
387
A
PRO
388
n
388
PRO
388
A
LYS
389
n
389
LYS
389
A
LYS
390
n
390
LYS
390
A
LYS
391
n
391
LYS
391
A
n
392
392
A
author_and_software_defined_assembly
PISA
2
dimeric
12640
-47.4
26030
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
7_555
y,x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
O
LEU
24
A
O
LEU
24
A
N
GLU
346
A
N
GLU
346
A
N
ILE
78
A
N
ILE
78
A
O
SER
218
A
O
SER
218
A
N
SER
221
A
N
SER
221
A
O
LEU
203
A
O
LEU
203
A
N
TYR
204
A
N
TYR
204
A
O
VAL
182
A
O
VAL
182
A
N
LEU
181
A
N
LEU
181
A
O
LEU
151
A
O
LEU
151
A
N
PHE
152
A
N
PHE
152
A
O
LEU
101
A
O
LEU
101
A
N
VAL
324
A
N
VAL
324
A
O
LEU
359
A
O
LEU
359
A
N
ARG
360
A
N
ARG
360
A
O
MET
348
A
O
MET
348
1
A
HOH
2023
J
HOH
1
A
HOH
2045
J
HOH
1
A
CG
ASN
22
A
CG
ASN
22
1
Y
1
A
OD1
ASN
22
A
OD1
ASN
22
1
Y
1
A
ND2
ASN
22
A
ND2
ASN
22
1
Y
1
A
CG
GLN
137
A
CG
GLN
137
1
Y
1
A
CD
GLN
137
A
CD
GLN
137
1
Y
1
A
OE1
GLN
137
A
OE1
GLN
137
1
Y
1
A
NE2
GLN
137
A
NE2
GLN
137
1
Y
1
A
CB
LYS
177
A
CB
LYS
177
1
Y
1
A
CG
LYS
177
A
CG
LYS
177
1
Y
1
A
CD
LYS
177
A
CD
LYS
177
1
Y
1
A
CE
LYS
177
A
CE
LYS
177
1
Y
1
A
NZ
LYS
177
A
NZ
LYS
177
1
Y
1
A
CG
LYS
389
A
CG
LYS
389
1
Y
1
A
CD
LYS
389
A
CD
LYS
389
1
Y
1
A
CE
LYS
389
A
CE
LYS
389
1
Y
1
A
NZ
LYS
389
A
NZ
LYS
389
1
Y
1
A
CG
LYS
390
A
CG
LYS
390
1
Y
1
A
CD
LYS
390
A
CD
LYS
390
1
Y
1
A
CE
LYS
390
A
CE
LYS
390
1
Y
1
A
NZ
LYS
390
A
NZ
LYS
390
1
Y
1
A
CA
LYS
391
A
CA
LYS
391
1
Y
1
A
C
LYS
391
A
C
LYS
391
1
Y
1
A
O
LYS
391
A
O
LYS
391
1
Y
1
A
CB
LYS
391
A
CB
LYS
391
1
Y
1
A
CG
LYS
391
A
CG
LYS
391
1
Y
1
A
CD
LYS
391
A
CD
LYS
391
1
Y
1
A
CE
LYS
391
A
CE
LYS
391
1
Y
1
A
NZ
LYS
391
A
NZ
LYS
391
1
Y
1
A
MET
1
A
MET
1
1
Y
1
A
ALA
2
A
ALA
2
1
Y
1
A
SER
3
A
SER
3
1
Y
1
A
ALA
121
A
ALA
121
1
Y
1
A
ARG
122
A
ARG
122
1
Y
1
A
LEU
392
A
LEU
392
1
Y
1
A
A
O
O
HOH
HOH
2043
2043
1.23
1_555
7_555
1
A
LYS
5
-69.26
-167.41
1
A
PRO
28
-66.94
9.23
1
A
GLN
69
70.68
73.15
1
A
PRO
96
-38.22
128.65
1
A
SER
99
72.42
114.02
1
A
PRO
125
-62.84
72.60
1
A
MET
126
-63.57
72.09
1
A
GLN
137
-61.28
-72.85
1
A
ALA
144
-65.27
-71.69
1
A
GLN
145
-49.43
-72.89
1
A
LYS
147
33.57
55.27
1
A
LYS
209
-97.30
-123.36
1
A
SER
232
-147.48
39.76
1
A
HIS
261
-110.75
-73.01
1
A
ASP
313
133.34
100.78
1
A
ALA
328
-6.07
-98.68
1
A
LEU
351
-166.27
119.03
1
A
PRO
388
-39.69
150.29
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
WATER.TOP
AOA_HEP_GOL.PAR
AOA_HEP_GOL.TOP
42.0
8.42
0.00
0.00
8.42
0.00
-16.84
0.286
0.009
0.231
0.231
2.50
47.49
1016
20672
4.9
98.3
RANDOM
2760167.23
1
RESTRAINED
THROUGHOUT
0.0
OTHER
FLAT MODEL
61.0505
0.378986
0.45
0.32
5.00
0.39
0.32
2.50
47.49
143
3153
57
0
2953
0.014
1.7
23.9
1.13
1.39
1.50
2.29
2.00
2.27
2.00
3.09
2.50
0.386
0.029
0.304
2.66
173
3256
6
5.0
99.5
25.9
2.500
50.000
1H0C
21044
0.07400
1
6.9000
7.700
99.9
0.17700
2.50
2.58
3.800
1
7.80
99.9
refinement
CNS
1.1
data reduction
MOSFLM
data scaling
SCALA
phasing
SOLVE/RESOLVE
SERINE--GLYOXYLATE AMINOTRANSFERASE (E.C.2.6.1.44, 2.6.1.51)
The crystal structure of human alanine:glyoxylate aminotransferase
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
4
N
N
5
N
N
A
PRO
11
A
PRO
11
HELX_P
A
LYS
16
A
LYS
16
5
1
6
A
PRO
34
A
PRO
34
HELX_P
A
GLY
42
A
GLY
42
1
2
9
A
SER
50
A
SER
50
HELX_P
A
GLN
69
A
GLN
69
1
3
20
A
SER
81
A
SER
81
HELX_P
A
LEU
94
A
LEU
94
1
4
14
A
GLY
106
A
GLY
106
HELX_P
A
GLY
120
A
GLY
120
1
5
15
A
THR
135
A
THR
135
HELX_P
A
LYS
147
A
LYS
147
1
6
13
A
GLY
168
A
GLY
168
HELX_P
A
ARG
175
A
ARG
175
1
7
8
A
SER
223
A
SER
223
HELX_P
A
TYR
231
A
TYR
231
1
8
9
A
ASP
243
A
ASP
243
HELX_P
A
TRP
251
A
TRP
251
1
9
9
A
PRO
265
A
PRO
265
HELX_P
A
GLY
283
A
GLY
283
1
10
19
A
GLY
283
A
GLY
283
HELX_P
A
GLY
306
A
GLY
306
1
11
24
A
ASP
313
A
ASP
313
HELX_P
A
LEU
316
A
LEU
316
5
12
4
A
ASP
331
A
ASP
331
HELX_P
A
ASP
344
A
ASP
344
1
13
14
A
LEU
351
A
LEU
351
HELX_P
A
THR
355
A
THR
355
5
14
5
A
LEU
364
A
LEU
364
HELX_P
A
ALA
368
A
ALA
368
5
15
5
A
THR
369
A
THR
369
HELX_P
A
CYS
387
A
CYS
387
1
16
19
covale
1.338
one
A
LYS
209
A
NZ
LYS
209
1_555
A
PLP
1391
B
C4A
PLP
1_555
TRANSFERASE
AMINOTRANSFERASE, PYRIDOXAL PHOSPHATE, TRANSFERASE
A
GLY
29
A
GLY
29
1
A
PRO
30
A
PRO
30
-0.69
SPYA_HUMAN
UNP
1
P21549
1
392
1H0C
1
392
P21549
A
1
1
392
2
6
3
parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
A
LEU
24
A
LEU
24
A
LEU
25
A
LEU
25
A
ILE
345
A
ILE
345
A
GLU
346
A
GLU
346
A
LEU
74
A
LEU
74
A
ILE
78
A
ILE
78
A
SER
218
A
SER
218
A
PHE
222
A
PHE
222
A
ILE
202
A
ILE
202
A
GLY
206
A
GLY
206
A
LEU
179
A
LEU
179
A
ASP
183
A
ASP
183
A
LEU
150
A
LEU
150
A
THR
154
A
THR
154
A
PHE
100
A
PHE
100
A
VAL
102
A
VAL
102
A
VAL
321
A
VAL
321
A
ALA
325
A
ALA
325
A
VAL
358
A
VAL
358
A
GLY
362
A
GLY
362
A
MET
348
A
MET
348
A
GLY
349
A
GLY
349
BINDING SITE FOR RESIDUE PLP A 1391
Software
14
BINDING SITE FOR RESIDUE AOA A 1392
Software
9
BINDING SITE FOR RESIDUE GOL A 1393
Software
3
BINDING SITE FOR RESIDUE GOL A 1394
Software
6
BINDING SITE FOR RESIDUE GOL A 1395
Software
6
BINDING SITE FOR RESIDUE GOL A 1396
Software
4
BINDING SITE FOR RESIDUE GOL A 1397
Software
4
BINDING SITE FOR RESIDUE GOL A 1398
Software
2
A
SER
81
A
SER
81
14
1_555
A
GLY
82
A
GLY
82
14
1_555
A
HIS
83
A
HIS
83
14
1_555
A
TRP
108
A
TRP
108
14
1_555
A
GLY
156
A
GLY
156
14
1_555
A
SER
158
A
SER
158
14
1_555
A
ASP
183
A
ASP
183
14
1_555
A
VAL
185
A
VAL
185
14
1_555
A
ALA
186
A
ALA
186
14
1_555
A
GLN
208
A
GLN
208
14
1_555
A
LYS
209
A
LYS
209
14
1_555
A
TYR
260
A
TYR
260
14
7_555
A
THR
263
A
THR
263
14
7_555
A
AOA
1392
C
AOA
14
1_555
A
PRO
28
A
PRO
28
9
1_555
A
GLY
29
A
GLY
29
9
1_555
A
SER
158
A
SER
158
9
1_555
A
LYS
209
A
LYS
209
9
1_555
A
LEU
351
A
LEU
351
9
1_555
A
ARG
360
A
ARG
360
9
1_555
A
PLP
1391
B
PLP
9
1_555
A
HOH
2098
J
HOH
9
7_555
A
HOH
2141
J
HOH
9
1_555
A
ARG
333
A
ARG
333
3
1_555
A
VAL
336
A
VAL
336
3
1_555
A
SER
337
A
SER
337
3
1_555
A
LEU
7
A
LEU
7
6
4_454
A
LEU
24
A
LEU
24
6
1_555
A
ARG
71
A
ARG
71
6
6_454
A
ASP
196
A
ASP
196
6
6_454
A
PHE
343
A
PHE
343
6
1_555
A
HOH
2137
J
HOH
6
1_555
A
LYS
228
A
LYS
228
6
6_454
A
GLN
290
A
GLN
290
6
1_555
A
GLU
293
A
GLU
293
6
1_555
A
THR
369
A
THR
369
6
1_555
A
ARG
370
A
ARG
370
6
1_555
A
GLU
371
A
GLU
371
6
1_555
A
PRO
17
A
PRO
17
4
1_555
A
SER
19
A
SER
19
4
1_555
A
ASP
52
A
ASP
52
4
7_555
A
GLN
55
A
GLN
55
4
7_555
A
ILE
107
A
ILE
107
4
1_555
A
GLN
110
A
GLN
110
4
1_555
A
ARG
111
A
ARG
111
4
1_555
A
ASP
114
A
ASP
114
4
1_555
A
HOH
2020
J
HOH
2
1_555
A
HOH
2143
J
HOH
2
1_555
92
P 41 21 2