1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Zahn, R. Guntert, P. Wuthrich, K. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 326 225 10.1016/S0022-2836(02)01332-3 12547204 NMR Structure of a Variant Human Prion Protein with Two Disulfide Bridges 2003 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 13106.572 MAJOR PRION PROTEIN RESIDUES 121-230 YES 1 man polymer PRP, PRION PROTEIN, PRP27-30, PRP33-35C no no GSVVGGLGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPCDEYSNQNNFVHDCVNITIKQHTVTTTTKGENF TETDVKMMERVVEQMCITQYERCSQAYYQRGS GSVVGGLGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPCDEYSNQNNFVHDCVNITIKQHTVTTTTKGENF TETDVKMMERVVEQMCITQYERCSQAYYQRGS A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n HUMAN sample 9606 BRAIN HOMO SAPIENS 469008 ESCHERICHIA COLI BL21(DE3) PRSET A repository Initial release Atomic model Derived calculations Other Structure summary Version format compliance 1 0 2003-01-30 1 1 2013-05-15 HUMAN PRION PROTEIN (MUTANT E200K) FRAGMENT 90-231 HUMAN PRION PROTEIN MUTANT E200K FRAGMENT 90 -231 CRYSTAL STRUCTURE OF THE HUMAN PRION PROTEIN REVEALS AMECHANISM FOR OLIGOMERIZATION HUMAN PRION PROTEIN HUMAN PRION PROTEIN HUMAN PRION PROTEIN FRAGMENT 90-230 HUMAN PRION PROTEIN FRAGMENT 90-230 HUMAN PRION PROTEIN FRAGMENT 121-230 HUMAN PRION PROTEIN FRAGMENT 121-230 HELIX DETERMINATION METHOD: AUTHOR PROVIDED. SHEET DETERMINATION METHOD: AUTHOR PROVIDED. PDBE Y PDBE 2002-06-24 REL DISULFIDE BOND BETWEEN C166 AND C221 ENGINEERED MUTATION MET 166 CYS AND GLU 221 CYS CHAIN A 2 RESIDUES (GLY SER) INSERTED AT THE N-TERMINUS MET166 AND GLU221 REPLACED AGAINST CYS THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE SPECTROSCOPY ON 13C, 15N-LABELED PROTEIN LEAST RESTRAINT VIOLATION 100 20 NOESY COSY 0.01 M 4.5 pH 1 atm 293 K torsion angle dynamics 2 KORADI, BILLETER, GUNTERT refinement OPALP structure solution DYANA 750 Bruker DRX GLY 119 n 1 GLY 119 A SER 120 n 2 SER 120 A VAL 121 n 3 VAL 121 A VAL 122 n 4 VAL 122 A GLY 123 n 5 GLY 123 A GLY 124 n 6 GLY 124 A LEU 125 n 7 LEU 125 A GLY 126 n 8 GLY 126 A GLY 127 n 9 GLY 127 A TYR 128 n 10 TYR 128 A MET 129 n 11 MET 129 A LEU 130 n 12 LEU 130 A GLY 131 n 13 GLY 131 A SER 132 n 14 SER 132 A ALA 133 n 15 ALA 133 A MET 134 n 16 MET 134 A SER 135 n 17 SER 135 A ARG 136 n 18 ARG 136 A PRO 137 n 19 PRO 137 A ILE 138 n 20 ILE 138 A ILE 139 n 21 ILE 139 A HIS 140 n 22 HIS 140 A PHE 141 n 23 PHE 141 A GLY 142 n 24 GLY 142 A SER 143 n 25 SER 143 A ASP 144 n 26 ASP 144 A TYR 145 n 27 TYR 145 A GLU 146 n 28 GLU 146 A ASP 147 n 29 ASP 147 A ARG 148 n 30 ARG 148 A TYR 149 n 31 TYR 149 A TYR 150 n 32 TYR 150 A ARG 151 n 33 ARG 151 A GLU 152 n 34 GLU 152 A ASN 153 n 35 ASN 153 A MET 154 n 36 MET 154 A HIS 155 n 37 HIS 155 A ARG 156 n 38 ARG 156 A TYR 157 n 39 TYR 157 A PRO 158 n 40 PRO 158 A ASN 159 n 41 ASN 159 A GLN 160 n 42 GLN 160 A VAL 161 n 43 VAL 161 A TYR 162 n 44 TYR 162 A TYR 163 n 45 TYR 163 A ARG 164 n 46 ARG 164 A PRO 165 n 47 PRO 165 A CYS 166 n 48 CYS 166 A ASP 167 n 49 ASP 167 A GLU 168 n 50 GLU 168 A TYR 169 n 51 TYR 169 A SER 170 n 52 SER 170 A ASN 171 n 53 ASN 171 A GLN 172 n 54 GLN 172 A ASN 173 n 55 ASN 173 A ASN 174 n 56 ASN 174 A PHE 175 n 57 PHE 175 A VAL 176 n 58 VAL 176 A HIS 177 n 59 HIS 177 A ASP 178 n 60 ASP 178 A CYS 179 n 61 CYS 179 A VAL 180 n 62 VAL 180 A ASN 181 n 63 ASN 181 A ILE 182 n 64 ILE 182 A THR 183 n 65 THR 183 A ILE 184 n 66 ILE 184 A LYS 185 n 67 LYS 185 A GLN 186 n 68 GLN 186 A HIS 187 n 69 HIS 187 A THR 188 n 70 THR 188 A VAL 189 n 71 VAL 189 A THR 190 n 72 THR 190 A THR 191 n 73 THR 191 A THR 192 n 74 THR 192 A THR 193 n 75 THR 193 A LYS 194 n 76 LYS 194 A GLY 195 n 77 GLY 195 A GLU 196 n 78 GLU 196 A ASN 197 n 79 ASN 197 A PHE 198 n 80 PHE 198 A THR 199 n 81 THR 199 A GLU 200 n 82 GLU 200 A THR 201 n 83 THR 201 A ASP 202 n 84 ASP 202 A VAL 203 n 85 VAL 203 A LYS 204 n 86 LYS 204 A MET 205 n 87 MET 205 A MET 206 n 88 MET 206 A GLU 207 n 89 GLU 207 A ARG 208 n 90 ARG 208 A VAL 209 n 91 VAL 209 A VAL 210 n 92 VAL 210 A GLU 211 n 93 GLU 211 A GLN 212 n 94 GLN 212 A MET 213 n 95 MET 213 A CYS 214 n 96 CYS 214 A ILE 215 n 97 ILE 215 A THR 216 n 98 THR 216 A GLN 217 n 99 GLN 217 A TYR 218 n 100 TYR 218 A GLU 219 n 101 GLU 219 A ARG 220 n 102 ARG 220 A CYS 221 n 103 CYS 221 A SER 222 n 104 SER 222 A GLN 223 n 105 GLN 223 A ALA 224 n 106 ALA 224 A TYR 225 n 107 TYR 225 A TYR 226 n 108 TYR 226 A GLN 227 n 109 GLN 227 A ARG 228 n 110 ARG 228 A GLY 229 n 111 GLY 229 A SER 230 n 112 SER 230 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O VAL 161 A O VAL 43 A N TYR 128 A N TYR 10 2 A A HG OE2 SER GLU 143 146 1.58 5 A A HH OD2 TYR ASP 128 178 1.58 5 A A HG OE1 SER GLU 143 146 1.60 6 A A HG OE2 SER GLU 143 146 1.54 7 A A HH OD1 TYR ASP 149 202 1.56 7 A A HH OD2 TYR ASP 128 178 1.58 9 A A HH OD1 TYR ASP 149 202 1.60 11 A A HH OD2 TYR ASP 149 202 1.59 11 A A HG OE2 SER GLU 143 146 1.59 13 A A HH OD2 TYR ASP 128 178 1.58 15 A A HH OD1 TYR ASP 149 202 1.58 16 A A O HG1 THR THR 188 192 1.59 18 A A OE1 HH GLU TYR 168 218 1.57 1 A A GLY SER 119 120 145.44 7 A A GLY TYR 127 128 144.75 14 A A GLY SER 229 230 147.62 17 A A GLY SER 142 143 149.29 17 A A GLY SER 229 230 142.39 18 A A GLY SER 229 230 -149.73 1 A ARG 148 0.086 SIDE CHAIN 1 A ARG 151 0.084 SIDE CHAIN 1 A ARG 164 0.102 SIDE CHAIN 1 A TYR 218 0.090 SIDE CHAIN 1 A TYR 225 0.064 SIDE CHAIN 1 A ARG 228 0.124 SIDE CHAIN 2 A TYR 128 0.065 SIDE CHAIN 2 A TYR 163 0.091 SIDE CHAIN 2 A ARG 164 0.120 SIDE CHAIN 2 A TYR 226 0.069 SIDE CHAIN 3 A ARG 148 0.126 SIDE CHAIN 3 A ARG 156 0.078 SIDE CHAIN 3 A TYR 163 0.081 SIDE CHAIN 3 A ARG 220 0.079 SIDE CHAIN 3 A ARG 228 0.105 SIDE CHAIN 4 A ARG 151 0.077 SIDE CHAIN 4 A PHE 175 0.096 SIDE CHAIN 4 A ARG 208 0.167 SIDE CHAIN 5 A TYR 150 0.087 SIDE CHAIN 5 A ARG 164 0.182 SIDE CHAIN 5 A PHE 175 0.081 SIDE CHAIN 5 A ARG 208 0.102 SIDE CHAIN 6 A ARG 148 0.102 SIDE CHAIN 7 A ARG 148 0.076 SIDE CHAIN 7 A ARG 156 0.111 SIDE CHAIN 7 A TYR 218 0.149 SIDE CHAIN 8 A ARG 148 0.096 SIDE CHAIN 8 A TYR 150 0.115 SIDE CHAIN 8 A TYR 169 0.079 SIDE CHAIN 8 A PHE 175 0.087 SIDE CHAIN 10 A ARG 148 0.094 SIDE CHAIN 11 A TYR 163 0.069 SIDE CHAIN 11 A ARG 164 0.113 SIDE CHAIN 12 A TYR 128 0.074 SIDE CHAIN 12 A ARG 151 0.142 SIDE CHAIN 12 A TYR 163 0.104 SIDE CHAIN 12 A TYR 218 0.090 SIDE CHAIN 13 A ARG 148 0.102 SIDE CHAIN 13 A TYR 149 0.082 SIDE CHAIN 13 A TYR 150 0.121 SIDE CHAIN 13 A ARG 164 0.082 SIDE CHAIN 14 A ARG 136 0.076 SIDE CHAIN 14 A ARG 148 0.125 SIDE CHAIN 14 A TYR 149 0.083 SIDE CHAIN 14 A TYR 162 0.068 SIDE CHAIN 14 A TYR 169 0.065 SIDE CHAIN 14 A ARG 208 0.217 SIDE CHAIN 15 A ARG 148 0.116 SIDE CHAIN 15 A TYR 226 0.070 SIDE CHAIN 17 A TYR 163 0.108 SIDE CHAIN 17 A ARG 164 0.089 SIDE CHAIN 17 A TYR 218 0.115 SIDE CHAIN 18 A ARG 136 0.092 SIDE CHAIN 18 A PHE 141 0.094 SIDE CHAIN 18 A TYR 149 0.094 SIDE CHAIN 18 A ARG 208 0.090 SIDE CHAIN 18 A ARG 220 0.084 SIDE CHAIN 19 A TYR 157 0.068 SIDE CHAIN 19 A ARG 228 0.089 SIDE CHAIN 20 A ARG 148 0.078 SIDE CHAIN 20 A ARG 208 0.109 SIDE CHAIN 3 8.70 1.40 123.60 132.30 A A A CD NE CZ ARG ARG ARG 164 164 164 N 3 3.35 0.50 120.30 123.65 A A A NE CZ NH1 ARG ARG ARG 164 164 164 N 4 9.09 1.40 123.60 132.69 A A A CD NE CZ ARG ARG ARG 164 164 164 N 4 3.28 0.50 120.30 123.58 A A A NE CZ NH1 ARG ARG ARG 164 164 164 N 5 6.68 1.10 114.20 120.88 A A A CA CB SG CYS CYS CYS 166 166 166 N 6 -3.63 0.60 121.00 117.37 A A A CB CG CD2 TYR TYR TYR 226 226 226 N 7 3.22 0.50 120.30 123.52 A A A NE CZ NH1 ARG ARG ARG 208 208 208 N 8 9.10 1.10 114.20 123.30 A A A CA CB SG CYS CYS CYS 166 166 166 N 8 3.14 0.50 120.30 123.44 A A A NE CZ NH1 ARG ARG ARG 228 228 228 N 9 -3.71 0.60 121.00 117.29 A A A CB CG CD2 TYR TYR TYR 226 226 226 N 12 3.04 0.50 120.30 123.34 A A A NE CZ NH1 ARG ARG ARG 148 148 148 N 14 8.84 1.40 123.60 132.44 A A A CD NE CZ ARG ARG ARG 164 164 164 N 18 -3.92 0.60 121.00 117.08 A A A CB CG CD2 TYR TYR TYR 169 169 169 N 1 A SER 120 86.52 112.92 1 A VAL 122 70.25 152.69 1 A TYR 128 44.17 172.18 1 A ARG 148 -66.99 0.99 1 A TYR 149 -93.28 -62.86 1 A ASN 171 63.83 174.11 2 A MET 134 -138.22 -154.27 2 A ILE 138 52.46 79.72 2 A PRO 165 -63.82 -174.84 2 A TYR 169 -56.95 90.51 2 A SER 170 -140.28 39.27 2 A ASN 171 62.32 162.32 2 A CYS 221 -50.90 -73.09 2 A ARG 228 -80.42 -80.40 3 A SER 120 67.35 161.94 3 A ILE 138 53.44 73.02 3 A ASP 147 -93.65 -62.21 3 A TYR 169 -31.19 98.08 3 A ASN 171 52.29 -171.63 3 A PHE 198 -53.77 178.65 4 A SER 132 49.26 178.40 4 A ILE 138 49.32 73.74 4 A CYS 166 -67.71 17.96 4 A TYR 169 43.65 24.83 4 A SER 170 -80.98 46.70 4 A ASN 171 70.42 162.25 5 A VAL 122 62.06 152.40 5 A LEU 125 -89.19 -88.62 5 A PRO 137 -69.88 6.40 5 A ILE 138 37.06 72.29 5 A GLU 168 -99.51 39.26 5 A SER 170 -157.14 -46.36 5 A ARG 228 -130.25 -68.62 6 A SER 120 67.49 148.65 6 A TYR 128 41.43 -169.48 6 A ILE 138 50.02 77.20 6 A GLU 168 -106.77 62.80 6 A SER 170 -171.12 52.14 6 A ASN 171 60.05 -179.96 7 A VAL 121 58.23 175.59 7 A VAL 122 67.06 152.44 7 A MET 129 -112.99 -160.41 7 A ILE 138 47.74 74.37 7 A PRO 165 -67.27 -173.32 7 A GLU 168 -69.50 -74.64 7 A TYR 169 65.72 171.44 7 A SER 170 66.60 -80.01 7 A ASN 171 178.37 165.90 8 A SER 120 47.42 23.62 8 A ILE 138 44.49 72.15 8 A ASN 159 -148.95 -6.51 8 A TYR 169 46.42 -133.12 8 A ASN 171 72.76 178.45 9 A LEU 125 -114.76 -72.62 9 A PRO 137 -66.26 5.98 9 A ILE 138 55.54 79.68 9 A ASP 147 -101.57 -68.30 9 A TYR 169 -65.74 -134.25 9 A SER 170 80.29 -48.38 9 A ASN 171 177.11 152.53 10 A LEU 125 -104.44 -72.67 10 A TYR 128 44.79 176.71 10 A SER 132 65.36 144.15 10 A ILE 138 47.56 70.98 10 A ASP 147 -108.38 -62.37 10 A CYS 166 -64.45 9.05 10 A TYR 169 -56.74 106.61 10 A ASN 171 62.65 171.25 11 A PRO 137 -69.14 5.06 11 A ILE 138 48.99 71.10 11 A TYR 169 38.02 31.64 11 A ASN 171 143.96 174.27 12 A LEU 125 -101.52 -74.35 12 A TYR 128 44.87 -170.30 12 A LEU 130 51.40 -176.37 12 A ALA 133 -56.22 171.36 12 A ILE 138 47.58 74.82 12 A TYR 169 -66.06 75.21 12 A ASN 171 57.72 177.18 12 A ARG 228 -78.62 -73.00 13 A VAL 122 65.86 143.25 13 A ILE 138 39.97 77.72 13 A ASP 147 -94.82 -69.71 13 A CYS 166 -71.58 25.28 13 A SER 170 143.92 -59.53 13 A ARG 228 -93.32 -77.80 14 A ILE 138 50.23 76.29 14 A ARG 156 -141.47 23.92 14 A TYR 163 -165.35 -168.17 14 A CYS 166 -64.95 4.86 14 A SER 170 -155.56 -40.20 14 A ARG 228 -94.02 -91.53 15 A SER 120 -63.46 90.62 15 A MET 129 -96.72 -105.55 15 A LEU 130 -172.26 130.85 15 A ILE 138 52.38 75.86 15 A ASN 159 -131.32 -34.99 15 A TYR 169 -75.00 -169.10 15 A SER 170 96.46 -33.37 15 A GLN 172 -121.81 -50.12 15 A ARG 228 -74.28 -84.87 16 A MET 129 -123.90 -92.17 16 A TYR 169 53.04 -134.78 16 A ASN 171 82.69 -173.90 16 A HIS 187 -69.83 2.66 16 A ARG 208 -24.78 -62.06 16 A ARG 228 -105.80 -98.52 17 A SER 120 75.39 36.27 17 A ASP 147 -106.08 -62.73 17 A GLU 152 -57.30 -72.45 17 A SER 170 -148.88 -62.00 18 A SER 120 66.43 166.76 18 A LEU 130 67.92 130.80 18 A ALA 133 -66.19 -178.76 18 A ILE 138 50.61 72.36 18 A ASP 147 -94.58 -63.05 18 A CYS 166 -74.82 22.97 18 A GLU 168 -148.64 33.39 18 A TYR 169 -62.67 78.43 18 A SER 170 -145.65 25.69 18 A ASN 171 92.35 149.32 19 A LEU 125 -90.78 -89.47 19 A MET 129 -127.72 -159.18 19 A SER 170 -162.11 -24.80 19 A GLN 172 -101.41 -60.73 19 A ASN 197 -163.45 116.74 19 A ARG 228 -108.62 -61.80 20 A MET 129 -93.37 -106.35 20 A ILE 138 57.58 74.84 20 A GLU 168 -111.23 57.93 20 A SER 170 178.28 -54.01 20 A ASN 197 -162.97 116.77 20 A ARG 228 -82.74 -85.63 MAJOR PRION PROTEIN HUMAN PRION PROTEIN 121-230 M166C/E221C 1 N N A ASP 144 A ASP 26 HELX_P A MET 154 A MET 36 1 H1 11 A ASN 173 A ASN 55 HELX_P A LYS 194 A LYS 76 1 H2 22 A GLU 200 A GLU 82 HELX_P A ARG 228 A ARG 110 1 H3 29 disulf 2.037 A CYS 166 A SG CYS 48 1_555 A CYS 221 A SG CYS 103 1_555 disulf 2.027 A CYS 179 A SG CYS 61 1_555 A CYS 214 A SG CYS 96 1_555 CELL CYCLE CELL CYCLE, BRAIN, GLYCOPROTEIN, GPI-ANCHOR, POLYMORPHISM, DISEASE MUTATION 1H0L PDB 1 1H0L PRIO_HUMAN UNP 1 P04156 119 120 1H0L 119 120 1H0L A 1 1 2 121 230 1H0L 121 230 P04156 A 2 3 112 1 MET engineered mutation CYS 166 1H0L A P04156 UNP 166 48 1 GLU engineered mutation CYS 221 1H0L A P04156 UNP 221 103 2 anti-parallel A TYR 128 A TYR 10 A GLY 131 A GLY 13 A VAL 161 A VAL 43 A ARG 164 A ARG 46 1 P 1