0.008045 0.000000 0.000000 0.000000 0.021295 0.000000 0.000000 0.000000 0.018573 0.00000 0.00000 0.00000 Gordeliy, V.I. Labahn, J. Moukhametzianov, R. Efremov, R. Granzin, J. Schlesinger, R. Bueldt, G. Savopol, T. Scheidig, A. Klare, J.P. Engelhard, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 124.300 46.960 53.840 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C14 H28 O6 292.369 n octyl beta-D-glucopyranoside Beta-Octylglucoside; octyl beta-D-glucoside; octyl D-glucoside; octyl glucoside D-saccharide C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C20 H28 O 284.436 RETINAL non-polymer C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 R C N 75 N O N 76 R C N 77 N O N 78 S C N 79 N O N 80 S C N 81 N O N 82 R C N 83 N O N 84 N C N 85 N O N 86 N C N 87 N C N 88 N C N 89 N C N 90 N C N 91 N C N 92 N C N 93 N C N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N N N 123 S C N 124 N C N 125 N O N 126 N C N 127 N C N 128 N C N 129 N O N 130 N N N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N N N 143 S C N 144 N C N 145 N O N 146 N C N 147 N C N 148 N C N 149 N O N 150 N O N 151 N O N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N N N 162 N C N 163 N C N 164 N O N 165 N O N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N N N 172 S C N 173 N C N 174 N O N 175 N C Y 176 N C Y 177 N N Y 178 N C Y 179 N C Y 180 N N N 181 N O N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N O N 193 N H N 194 N H N 195 N N N 196 S C N 197 N C N 198 N O N 199 S C N 200 N C N 201 N C N 202 N C N 203 N O N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N N N 218 S C N 219 N C N 220 N O N 221 N C N 222 N C N 223 N C N 224 N C N 225 N O N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N N N 240 S C N 241 N C N 242 N O N 243 N C N 244 N C N 245 N C N 246 N C N 247 N N N 248 N O N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N N N 265 S C N 266 N C N 267 N O N 268 N C N 269 N C N 270 N S N 271 N C N 272 N O N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N N N 285 S C N 286 N C N 287 N O N 288 N C Y 289 N C Y 290 N C Y 291 N C Y 292 N C Y 293 N C Y 294 N C N 295 N O N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C N 312 N C N 313 N C N 314 N O N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N C N 325 N C N 326 N C N 327 N C N 328 N C N 329 N C N 330 N C N 331 N C N 332 N C N 333 N C N 334 N C N 335 N C N 336 N C N 337 N C N 338 N C N 339 N O N 340 N C N 341 N C N 342 N C N 343 N C N 344 N C N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N N N 374 S C N 375 N C N 376 N O N 377 N C N 378 N O N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N N N 388 S C N 389 N C N 390 N O N 391 R C N 392 N O N 393 N C N 394 N O N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N N N 405 S C N 406 N C N 407 N O N 408 N C Y 409 N C Y 410 N C Y 411 N C Y 412 N N Y 413 N C Y 414 N C Y 415 N C Y 416 N C Y 417 N C N 418 N O N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N N N 432 S C N 433 N C N 434 N O N 435 N C Y 436 N C Y 437 N C Y 438 N C Y 439 N C Y 440 N C Y 441 N C N 442 N O N 443 N O N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N N N 456 S C N 457 N C N 458 N O N 459 N C N 460 N C N 461 N C N 462 N O N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N doub N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N doub N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N doub N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N doub N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N doub N 171 N sing N 172 N sing N 173 N sing N 174 N sing Y 175 N sing Y 176 N doub Y 177 N doub N 178 N sing Y 179 N sing N 180 N sing Y 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N doub N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N doub N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N doub N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N doub N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N doub N 279 N sing N 280 N sing N 281 N sing N 282 N sing Y 283 N doub Y 284 N sing Y 285 N sing N 286 N sing Y 287 N doub N 288 N sing Y 289 N doub N 290 N sing Y 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N doub N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N doub N 326 N sing N 327 N sing N 328 E doub N 329 N sing N 330 N sing N 331 N sing N 332 E doub N 333 N sing N 334 N sing N 335 N sing N 336 E doub N 337 N sing N 338 N sing N 339 N sing N 340 E doub N 341 N sing N 342 N sing N 343 N sing N 344 N doub N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N doub N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N doub N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N doub N 397 N sing N 398 N sing N 399 N sing N 400 N sing Y 401 N doub Y 402 N sing Y 403 N sing N 404 N sing Y 405 N doub Y 406 N sing Y 407 N sing N 408 N sing Y 409 N sing Y 410 N doub N 411 N sing Y 412 N doub N 413 N sing Y 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N doub N 425 N sing N 426 N sing N 427 N sing N 428 N sing Y 429 N doub Y 430 N sing Y 431 N sing N 432 N sing Y 433 N doub N 434 N sing Y 435 N doub N 436 N sing Y 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N doub N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing UK Nature NATUAS 0006 0028-0836 419 484 10.1038/NATURE01109 12368857 Molecular Basis of Transmembrane Signalling by Sensory Rhodopsin II-Transducer Complex 2002 10.2210/pdb1h2s/pdb pdb_00001h2s 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.0 1 CCD SINGLE WAVELENGTH M x-ray 1 0.934 1.0 ID14-1 ESRF 0.934 SYNCHROTRON ESRF BEAMLINE ID14-1 HIS-TAG 24085.465 SENSORY RHODOPSIN II RESIDUES 1-225 1 man polymer HIS-TAG 5714.688 SENSORY RHODOPSIN II TRANSDUCER RESIDUES 23-82 1 man polymer 292.369 octyl beta-D-glucopyranoside 1 man non-polymer 284.436 RETINAL 1 syn non-polymer 18.015 water 40 nat water TRANSDUCER HTR II FRAGMENT , HTR-II, METHYL-ACCEPTING PHOTOTAXIS PROTEIN II, MPP-II no no MVGLTTLFWLGAIGMLVGTLAFAWAGRDAGSGERRYYVTLVGISGIAAVAYVVMALGVGWVPVAERTVFAPRYIDWILTT PLIVYFLGLLAGLDSREFGIVITLNTVVMLAGFAGAMVPGIERYALFGMGAVAFLGLVYYLVGPMTESASQRSSGIKSLY VRLRNLTVILWAIYPFIWLLGPPGVALLTPTVDVALIVYLDLVTKVGFGFIALDAAATLRAEHGE MVGLTTLFWLGAIGMLVGTLAFAWAGRDAGSGERRYYVTLVGISGIAAVAYVVMALGVGWVPVAERTVFAPRYIDWILTT PLIVYFLGLLAGLDSREFGIVITLNTVVMLAGFAGAMVPGIERYALFGMGAVAFLGLVYYLVGPMTESASQRSSGIKSLY VRLRNLTVILWAIYPFIWLLGPPGVALLTPTVDVALIVYLDLVTKVGFGFIALDAAATLRAEHGE A polypeptide(L) no no GAVFIFVGALTVLFGAIAYGEVTAAAATGDAAAVQEAAVSAILGLIILLGINLGLVAATL GAVFIFVGALTVLFGAIAYGEVTAAAATGDAAAVQEAAVSAILGLIILLGINLGLVAATL B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 2257 NATRONOMONAS PHARAONIS 469008 ESCHERICHIA COLI BL21(DE3) PET27BMOD sample 2257 NATRONOMONAS PHARAONIS 469008 ESCHERICHIA COLI BL21(DE3) PET27BMOD 1 2.64 53.35 LIPIDIC CUBIC PHASE 5.10 150 MM NACL, 25 MM NAKPI 5.1 0.8% B-OCTYLGLUCOSID , MONOVACCENIN (CUBIC PHASE) PRECIPITATED BY 1 M NA/KPI 5.8 AT 22 C, pH 5.10 295 database_PDB_rev database_PDB_rev_record exptl_crystal_grow pdbx_database_proc pdbx_database_status pdbx_unobs_or_zero_occ_residues struct_conn database_PDB_rev database_PDB_rev_record exptl_crystal_grow pdbx_validate_close_contact struct_biol struct_conn chem_comp entity pdbx_chem_comp_identifier pdbx_database_status pdbx_entity_nonpoly struct_site struct_site_gen chem_comp chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model pdbx_unobs_or_zero_occ_residues repository Initial release Carbohydrate remediation repository Remediation Version format compliance Version format compliance Advisory Data collection Derived calculations Experimental preparation Other Advisory Data collection Derived calculations Experimental preparation Data collection Derived calculations Other Structure summary Advisory Data collection Database references Refinement description Structure summary 1 0 2002-10-10 1 1 2011-05-08 1 2 2011-07-13 1 3 2019-05-08 1 4 2019-05-22 1 5 2020-07-29 1 6 2023-12-13 _exptl_crystal_grow.temp _pdbx_database_status.recvd_author_approval _struct_conn.pdbx_leaving_atom_flag _exptl_crystal_grow.method _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.type _entity.pdbx_description _pdbx_database_status.status_code_sf _pdbx_entity_nonpoly.name _chem_comp.pdbx_synonyms _database_2.pdbx_DOI _database_2.pdbx_database_accession b-octylglucoside SENSORY RHODOPSIN II SENSORY RHODOPSIN II SENSORY RHODOPSIN II CRYSTAL STRUCTURE OF SENSORY RHODOPSIN II AT 2.4 ANGSTROMS:INSIGHTS INTO COLOR TUNING AND TRANSDUCER INTERACTION PDBE Y PDBE 2002-08-15 REL REL BOG octyl beta-D-glucopyranoside RET RETINAL HOH water SENSORY RHODOPSIN II INVOLVED IN CONTROL OF PHOTOTAXIS. SEEMS TO ACTIVATE A METHYL-ACCEPTING PROTEIN (HTR-II). SENSORY RHODOPSIN II TRANSDUCER (HTR-II) TRANSDUCES SIGNALS FROM THE PHOTOTAXIS RECEPTOR SENSORY RHODOPSIN II TO FLAGELLAR MOTOR. 1JGJ PDB ENTRY 1JGJ PDB experimental model BOG 301 3 BOG BOG 301 A RET 302 4 RET RET 302 A HOH 2001 5 HOH HOH 2001 A HOH 2002 5 HOH HOH 2002 A HOH 2003 5 HOH HOH 2003 A HOH 2004 5 HOH HOH 2004 A HOH 2005 5 HOH HOH 2005 A HOH 2006 5 HOH HOH 2006 A HOH 2007 5 HOH HOH 2007 A HOH 2008 5 HOH HOH 2008 A HOH 2009 5 HOH HOH 2009 A HOH 2010 5 HOH HOH 2010 A HOH 2011 5 HOH HOH 2011 A HOH 2012 5 HOH HOH 2012 A HOH 2013 5 HOH HOH 2013 A HOH 2014 5 HOH HOH 2014 A HOH 2015 5 HOH HOH 2015 A HOH 2016 5 HOH HOH 2016 A HOH 2017 5 HOH HOH 2017 A HOH 2018 5 HOH HOH 2018 A HOH 2019 5 HOH HOH 2019 A HOH 2020 5 HOH HOH 2020 A HOH 2021 5 HOH HOH 2021 A HOH 2022 5 HOH HOH 2022 A HOH 2023 5 HOH HOH 2023 A HOH 2024 5 HOH HOH 2024 A HOH 2025 5 HOH HOH 2025 A HOH 2026 5 HOH HOH 2026 A HOH 2027 5 HOH HOH 2027 A HOH 2028 5 HOH HOH 2028 A HOH 2029 5 HOH HOH 2029 A HOH 2030 5 HOH HOH 2030 A HOH 2031 5 HOH HOH 2031 A HOH 2032 5 HOH HOH 2032 A HOH 2033 5 HOH HOH 2033 A HOH 2034 5 HOH HOH 2034 A HOH 2035 5 HOH HOH 2035 A HOH 2036 5 HOH HOH 2036 A HOH 2037 5 HOH HOH 2037 A HOH 2038 5 HOH HOH 2038 A HOH 2039 5 HOH HOH 2039 A HOH 2001 5 HOH HOH 2001 B MET 1 n 1 MET 1 A VAL 2 n 2 VAL 2 A GLY 3 n 3 GLY 3 A LEU 4 n 4 LEU 4 A THR 5 n 5 THR 5 A THR 6 n 6 THR 6 A LEU 7 n 7 LEU 7 A PHE 8 n 8 PHE 8 A TRP 9 n 9 TRP 9 A LEU 10 n 10 LEU 10 A GLY 11 n 11 GLY 11 A ALA 12 n 12 ALA 12 A ILE 13 n 13 ILE 13 A GLY 14 n 14 GLY 14 A MET 15 n 15 MET 15 A LEU 16 n 16 LEU 16 A VAL 17 n 17 VAL 17 A GLY 18 n 18 GLY 18 A THR 19 n 19 THR 19 A LEU 20 n 20 LEU 20 A ALA 21 n 21 ALA 21 A PHE 22 n 22 PHE 22 A ALA 23 n 23 ALA 23 A TRP 24 n 24 TRP 24 A ALA 25 n 25 ALA 25 A GLY 26 n 26 GLY 26 A ARG 27 n 27 ARG 27 A ASP 28 n 28 ASP 28 A ALA 29 n 29 ALA 29 A GLY 30 n 30 GLY 30 A SER 31 n 31 SER 31 A GLY 32 n 32 GLY 32 A GLU 33 n 33 GLU 33 A ARG 34 n 34 ARG 34 A ARG 35 n 35 ARG 35 A TYR 36 n 36 TYR 36 A TYR 37 n 37 TYR 37 A VAL 38 n 38 VAL 38 A THR 39 n 39 THR 39 A LEU 40 n 40 LEU 40 A VAL 41 n 41 VAL 41 A GLY 42 n 42 GLY 42 A ILE 43 n 43 ILE 43 A SER 44 n 44 SER 44 A GLY 45 n 45 GLY 45 A ILE 46 n 46 ILE 46 A ALA 47 n 47 ALA 47 A ALA 48 n 48 ALA 48 A VAL 49 n 49 VAL 49 A ALA 50 n 50 ALA 50 A TYR 51 n 51 TYR 51 A VAL 52 n 52 VAL 52 A VAL 53 n 53 VAL 53 A MET 54 n 54 MET 54 A ALA 55 n 55 ALA 55 A LEU 56 n 56 LEU 56 A GLY 57 n 57 GLY 57 A VAL 58 n 58 VAL 58 A GLY 59 n 59 GLY 59 A TRP 60 n 60 TRP 60 A VAL 61 n 61 VAL 61 A PRO 62 n 62 PRO 62 A VAL 63 n 63 VAL 63 A ALA 64 n 64 ALA 64 A GLU 65 n 65 GLU 65 A ARG 66 n 66 ARG 66 A THR 67 n 67 THR 67 A VAL 68 n 68 VAL 68 A PHE 69 n 69 PHE 69 A ALA 70 n 70 ALA 70 A PRO 71 n 71 PRO 71 A ARG 72 n 72 ARG 72 A TYR 73 n 73 TYR 73 A ILE 74 n 74 ILE 74 A ASP 75 n 75 ASP 75 A TRP 76 n 76 TRP 76 A ILE 77 n 77 ILE 77 A LEU 78 n 78 LEU 78 A THR 79 n 79 THR 79 A THR 80 n 80 THR 80 A PRO 81 n 81 PRO 81 A LEU 82 n 82 LEU 82 A ILE 83 n 83 ILE 83 A VAL 84 n 84 VAL 84 A TYR 85 n 85 TYR 85 A PHE 86 n 86 PHE 86 A LEU 87 n 87 LEU 87 A GLY 88 n 88 GLY 88 A LEU 89 n 89 LEU 89 A LEU 90 n 90 LEU 90 A ALA 91 n 91 ALA 91 A GLY 92 n 92 GLY 92 A LEU 93 n 93 LEU 93 A ASP 94 n 94 ASP 94 A SER 95 n 95 SER 95 A ARG 96 n 96 ARG 96 A GLU 97 n 97 GLU 97 A PHE 98 n 98 PHE 98 A GLY 99 n 99 GLY 99 A ILE 100 n 100 ILE 100 A VAL 101 n 101 VAL 101 A ILE 102 n 102 ILE 102 A THR 103 n 103 THR 103 A LEU 104 n 104 LEU 104 A ASN 105 n 105 ASN 105 A THR 106 n 106 THR 106 A VAL 107 n 107 VAL 107 A VAL 108 n 108 VAL 108 A MET 109 n 109 MET 109 A LEU 110 n 110 LEU 110 A ALA 111 n 111 ALA 111 A GLY 112 n 112 GLY 112 A PHE 113 n 113 PHE 113 A ALA 114 n 114 ALA 114 A GLY 115 n 115 GLY 115 A ALA 116 n 116 ALA 116 A MET 117 n 117 MET 117 A VAL 118 n 118 VAL 118 A PRO 119 n 119 PRO 119 A GLY 120 n 120 GLY 120 A ILE 121 n 121 ILE 121 A GLU 122 n 122 GLU 122 A ARG 123 n 123 ARG 123 A TYR 124 n 124 TYR 124 A ALA 125 n 125 ALA 125 A LEU 126 n 126 LEU 126 A PHE 127 n 127 PHE 127 A GLY 128 n 128 GLY 128 A MET 129 n 129 MET 129 A GLY 130 n 130 GLY 130 A ALA 131 n 131 ALA 131 A VAL 132 n 132 VAL 132 A ALA 133 n 133 ALA 133 A PHE 134 n 134 PHE 134 A LEU 135 n 135 LEU 135 A GLY 136 n 136 GLY 136 A LEU 137 n 137 LEU 137 A VAL 138 n 138 VAL 138 A TYR 139 n 139 TYR 139 A TYR 140 n 140 TYR 140 A LEU 141 n 141 LEU 141 A VAL 142 n 142 VAL 142 A GLY 143 n 143 GLY 143 A PRO 144 n 144 PRO 144 A MET 145 n 145 MET 145 A THR 146 n 146 THR 146 A GLU 147 n 147 GLU 147 A SER 148 n 148 SER 148 A ALA 149 n 149 ALA 149 A SER 150 n 150 SER 150 A GLN 151 n 151 GLN 151 A ARG 152 n 152 ARG 152 A SER 153 n 153 SER 153 A SER 154 n 154 SER 154 A GLY 155 n 155 GLY 155 A ILE 156 n 156 ILE 156 A LYS 157 n 157 LYS 157 A SER 158 n 158 SER 158 A LEU 159 n 159 LEU 159 A TYR 160 n 160 TYR 160 A VAL 161 n 161 VAL 161 A ARG 162 n 162 ARG 162 A LEU 163 n 163 LEU 163 A ARG 164 n 164 ARG 164 A ASN 165 n 165 ASN 165 A LEU 166 n 166 LEU 166 A THR 167 n 167 THR 167 A VAL 168 n 168 VAL 168 A ILE 169 n 169 ILE 169 A LEU 170 n 170 LEU 170 A TRP 171 n 171 TRP 171 A ALA 172 n 172 ALA 172 A ILE 173 n 173 ILE 173 A TYR 174 n 174 TYR 174 A PRO 175 n 175 PRO 175 A PHE 176 n 176 PHE 176 A ILE 177 n 177 ILE 177 A TRP 178 n 178 TRP 178 A LEU 179 n 179 LEU 179 A LEU 180 n 180 LEU 180 A GLY 181 n 181 GLY 181 A PRO 182 n 182 PRO 182 A PRO 183 n 183 PRO 183 A GLY 184 n 184 GLY 184 A VAL 185 n 185 VAL 185 A ALA 186 n 186 ALA 186 A LEU 187 n 187 LEU 187 A LEU 188 n 188 LEU 188 A THR 189 n 189 THR 189 A PRO 190 n 190 PRO 190 A THR 191 n 191 THR 191 A VAL 192 n 192 VAL 192 A ASP 193 n 193 ASP 193 A VAL 194 n 194 VAL 194 A ALA 195 n 195 ALA 195 A LEU 196 n 196 LEU 196 A ILE 197 n 197 ILE 197 A VAL 198 n 198 VAL 198 A TYR 199 n 199 TYR 199 A LEU 200 n 200 LEU 200 A ASP 201 n 201 ASP 201 A LEU 202 n 202 LEU 202 A VAL 203 n 203 VAL 203 A THR 204 n 204 THR 204 A LYS 205 n 205 LYS 205 A VAL 206 n 206 VAL 206 A GLY 207 n 207 GLY 207 A PHE 208 n 208 PHE 208 A GLY 209 n 209 GLY 209 A PHE 210 n 210 PHE 210 A ILE 211 n 211 ILE 211 A ALA 212 n 212 ALA 212 A LEU 213 n 213 LEU 213 A ASP 214 n 214 ASP 214 A ALA 215 n 215 ALA 215 A ALA 216 n 216 ALA 216 A ALA 217 n 217 ALA 217 A THR 218 n 218 THR 218 A LEU 219 n 219 LEU 219 A ARG 220 n 220 ARG 220 A ALA 221 n 221 ALA 221 A GLU 222 n 222 GLU 222 A HIS 223 n 223 HIS 223 A GLY 224 n 224 GLY 224 A GLU 225 n 225 GLU 225 A GLY 23 n 1 GLY 23 B ALA 24 n 2 ALA 24 B VAL 25 n 3 VAL 25 B PHE 26 n 4 PHE 26 B ILE 27 n 5 ILE 27 B PHE 28 n 6 PHE 28 B VAL 29 n 7 VAL 29 B GLY 30 n 8 GLY 30 B ALA 31 n 9 ALA 31 B LEU 32 n 10 LEU 32 B THR 33 n 11 THR 33 B VAL 34 n 12 VAL 34 B LEU 35 n 13 LEU 35 B PHE 36 n 14 PHE 36 B GLY 37 n 15 GLY 37 B ALA 38 n 16 ALA 38 B ILE 39 n 17 ILE 39 B ALA 40 n 18 ALA 40 B TYR 41 n 19 TYR 41 B GLY 42 n 20 GLY 42 B GLU 43 n 21 GLU 43 B VAL 44 n 22 VAL 44 B THR 45 n 23 THR 45 B ALA 46 n 24 ALA 46 B ALA 47 n 25 ALA 47 B ALA 48 n 26 ALA 48 B ALA 49 n 27 ALA 49 B THR 50 n 28 THR 50 B GLY 51 n 29 GLY 51 B ASP 52 n 30 ASP 52 B ALA 53 n 31 ALA 53 B ALA 54 n 32 ALA 54 B ALA 55 n 33 ALA 55 B VAL 56 n 34 VAL 56 B GLN 57 n 35 GLN 57 B GLU 58 n 36 GLU 58 B ALA 59 n 37 ALA 59 B ALA 60 n 38 ALA 60 B VAL 61 n 39 VAL 61 B SER 62 n 40 SER 62 B ALA 63 n 41 ALA 63 B ILE 64 n 42 ILE 64 B LEU 65 n 43 LEU 65 B GLY 66 n 44 GLY 66 B LEU 67 n 45 LEU 67 B ILE 68 n 46 ILE 68 B ILE 69 n 47 ILE 69 B LEU 70 n 48 LEU 70 B LEU 71 n 49 LEU 71 B GLY 72 n 50 GLY 72 B ILE 73 n 51 ILE 73 B ASN 74 n 52 ASN 74 B LEU 75 n 53 LEU 75 B GLY 76 n 54 GLY 76 B LEU 77 n 55 LEU 77 B VAL 78 n 56 VAL 78 B ALA 79 n 57 ALA 79 B ALA 80 n 58 ALA 80 B THR 81 n 59 THR 81 B LEU 82 n 60 LEU 82 B author_and_software_defined_assembly PQS 4 tetrameric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_565 -x,-y+1,z crystal symmetry operation 0.0000000000 46.9600000000 0.0000000000 A N VAL 61 A N VAL 61 A O VAL 68 A O VAL 68 1 B GLY 23 B GLY 1 0 Y 1 A A NH2 O6 ARG BOG 35 301 1.66 1 A A NZ C14 LYS RET 205 302 2.14 1 A VAL 2 77.40 87.78 1 A PRO 62 -69.03 66.40 1 A ALA 64 -9.81 87.92 PROTEIN.LINK PROTEIN.TOP PROTEIN_REP.PARAM WATER.TOP WATER_REP.PARAM WATER_REP.PARAM BOG.PARAM BOG.TOP 32.3815 -2.111 0.000 0.000 -1.799 0.000 3.910 0.2578 0.2255 0.2255 1.93 60. 1143 23156 4.7 94.7 RANDOM 1000 1 RESTRAINED THROUGHOUT 0. MOLECULAR REPLACEMENT PDB ENTRY 1JGJ FLAT 0.26 0.23 0.14 0.04 1.93 60. 40 2187 40 0 2107 0.009247 1.07126 16.98526 0.79506 0.2720 0.2352 2.00 77 1765 10 1.930 60.000 1H2S 23156 0.000 0.06200 1 5.5000 3.500 94.7 refinement CNS 1.0 data reduction MOSFLM data scaling SCALA phasing MOLREP Molecular basis of transmenbrane signalling by sensory rhodopsin II-transducer complex 1 N N 2 N N 3 N N 4 N N 5 N N 5 N N A GLY 3 A GLY 3 HELX_P A GLY 26 A GLY 26 1 1 24 A GLU 33 A GLU 33 HELX_P A LEU 56 A LEU 56 1 2 24 A ALA 70 A ALA 70 HELX_P A GLY 92 A GLY 92 1 3 23 A ASP 94 A ASP 94 HELX_P A VAL 118 A VAL 118 1 4 25 A ILE 121 A ILE 121 HELX_P A GLY 143 A GLY 143 1 5 23 A GLY 143 A GLY 143 HELX_P A SER 150 A SER 150 1 6 8 A SER 153 A SER 153 HELX_P A ALA 172 A ALA 172 1 7 20 A ILE 173 A ILE 173 HELX_P A GLY 181 A GLY 181 1 8 9 A THR 189 A THR 189 HELX_P A THR 204 A THR 204 1 9 16 A VAL 206 A VAL 206 HELX_P A HIS 223 A HIS 223 1 10 18 B GLY 23 B GLY 1 HELX_P B GLY 51 B GLY 29 1 11 29 B ASP 52 B ASP 30 HELX_P B LEU 82 B LEU 60 1 12 31 covale 1.107 one A LYS 205 A NZ LYS 205 1_555 A RET 302 D C15 RET 1_555 MEMBRANE PROTEIN MEMBRANE PROTEIN, MENBRANE PROTEIN COMPLEX, SIGNAL TRANSDUCTION BACT_NATPH UNP 1 P42196 HTR2_NATPH UNP 2 P42259 1 225 1H2S 1 225 P42196 A 1 1 225 23 82 1H2S 23 82 P42259 B 2 1 60 2 anti-parallel A TRP 60 A TRP 60 A VAL 61 A VAL 61 A VAL 68 A VAL 68 A PHE 69 A PHE 69 18 P 21 21 2