1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Bottomley, M.J.
Liu, Z.
Collard, M.W.
Huggenvik, J.I.
Gibson, T.J.
Sattler, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
S
C
N
142
N
C
N
143
N
C
N
144
N
C
N
145
N
O
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
N
N
160
S
C
N
161
N
C
N
162
N
O
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
C
N
167
N
O
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
N
N
182
S
C
N
183
N
C
N
184
N
O
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
C
N
189
N
N
N
190
N
O
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
C
N
212
N
S
N
213
N
C
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
N
N
227
S
C
N
228
N
C
N
229
N
O
N
230
N
C
Y
231
N
C
Y
232
N
C
Y
233
N
C
Y
234
N
C
Y
235
N
C
Y
236
N
C
N
237
N
O
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
N
N
250
S
C
N
251
N
C
N
252
N
O
N
253
N
C
N
254
N
C
N
255
N
C
N
256
N
O
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
N
N
267
S
C
N
268
N
C
N
269
N
O
N
270
N
C
N
271
N
O
N
272
N
O
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
R
C
N
285
N
O
N
286
N
C
N
287
N
O
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
N
N
298
S
C
N
299
N
C
N
300
N
O
N
301
N
C
Y
302
N
C
Y
303
N
C
Y
304
N
C
Y
305
N
N
Y
306
N
C
Y
307
N
C
Y
308
N
C
Y
309
N
C
Y
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
N
N
325
S
C
N
326
N
C
N
327
N
O
N
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
O
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
N
353
N
C
N
354
N
C
N
355
N
O
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
doub
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
Y
225
N
doub
Y
226
N
sing
Y
227
N
sing
N
228
N
sing
Y
229
N
doub
N
230
N
sing
Y
231
N
doub
N
232
N
sing
Y
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
doub
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
doub
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
Y
294
N
doub
Y
295
N
sing
Y
296
N
sing
N
297
N
sing
Y
298
N
doub
Y
299
N
sing
Y
300
N
sing
N
301
N
sing
Y
302
N
sing
Y
303
N
doub
N
304
N
sing
Y
305
N
doub
N
306
N
sing
Y
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
doub
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
Y
322
N
doub
Y
323
N
sing
Y
324
N
sing
N
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
doub
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
US
Nat. Struct. Biol.
NSBIEW
2024
1072-8368
8
626
633
10.1038/89675
11427895
The SAND domain structure defines a novel DNA-binding fold in transcriptional regulation.
2001
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
274
30510
10.1074/JBC.274.43.30510
10521432
Nuclear Deaf-1-Related (Nudr) Protein Contains a Novel DNA Binding Domain and Represses Transcription of the Heterogeneous Nuclear Ribonucleoprotein A2/B1 Promoter
1999
NE
Trends Biochem.Sci.
TBSCDB
0946
0968-0004
23
242
10.1016/S0968-0004(98)01231-6
9697411
The Apeced Polyglandular Autoimmune Syndrome Protein, Aire-1, Contains the Sand Domain and is Probably a Transcription Factor
1998
10.2210/pdb1h5p/pdb
pdb_00001h5p
10.13018/BMR5558
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
11052.805
NUCLEAR AUTOANTIGEN SP100-B
RESIDUES 595-688
1
man
polymer
SAND DOMAIN, KDWK DOMAIN, SPECKLED 100 KDA, NUCLEAR DOT-ASSOCIATED SP100 PROTEIN, LYSP100B
no
no
MDENINFKQSELPVTCGEVKGTLYKERFKQGTSKKCIQSEDKKWFTPREFEIEGDRGASKNWKLSIRCGGYTLKVLMENK
FLPEPPSTRKKVTIK
MDENINFKQSELPVTCGEVKGTLYKERFKQGTSKKCIQSEDKKWFTPREFEIEGDRGASKNWKLSIRCGGYTLKVLMENK
FLPEPPSTRKKVTIK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HUMAN
sample
9606
HOMO SAPIENS
EXPRESSED AS FUSION PROTEIN WITH N-TERMINAL 6-HISTIDINE TAG AND A TEV PROTEASE CLEAVAGE SITE
469008
Escherichia coli BL21(DE3)
MODIFIED PET-24D
citation
entity_src_gen
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_nmr_software
repository
Initial release
Version format compliance
Version format compliance
Database references
Source and taxonomy
Data collection
Database references
Other
1
0
2001-07-06
1
1
2011-05-08
1
2
2011-07-13
1
3
2018-03-28
1
4
2024-05-15
_citation.journal_abbrev
_citation.page_last
_citation.title
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id
_entity_src_gen.pdbx_host_org_scientific_name
_entity_src_gen.pdbx_host_org_strain
_entity_src_gen.pdbx_host_org_variant
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_mr
_pdbx_nmr_software.name
PDBE
Y
PDBE
2001-05-24
REL
REL
THE STRUCTURE IS FOR THE SPLICE VARIANT SP100B SAND DOMAIN.
THE RESIDUES 685 -688 (RILE IN ISOFORM SP100-A) ARE
(VTIK IN ISOFORM SP100-B) DIFFERENT IN THE TWO SPLICE VARIANTS
MET A 594 IS A CLONING ARTIFACT.
ACCEPTABLE COVALENT GEOMETRY, FAVOURABLE NON-BOND ENERGY, FEWEST RESTRAINT VIOLATIONS, LOWEST OVERALL ENERGIES
100
10
3D 13C-SEPARATED NOESY
3D 15N-SEPARATED NOESY
HNHA
20 MM SODIUM PHOSPHATE, 50 MM SODIUM CHLORIDE
6.5
pH
1
atm
295.0
K
DURING THE STRUCTURE CALCULATIONS, THE PROGRAM ARIA 1.0 (M.NILGES & S.I.O'DONOGHUE) WAS USED TO EMPLOY DISTANCE RESTRAINTS DERIVED FROM AMBIGUOUSLY ASSIGNED NOES. FROM A TOTAL OF 2120 NOES, ABOUT 80% WERE MANUALLY ASSIGNED, THE REMAINDER WAS ASSIGNED BY ARIA.
ARIA AMBIGUOUS DISTANCE RESTRAINTS SIMULATED ANNEALING WITH TORSION ANGLE DYNAMICS
1
1.2 MM PROTEIN, 20 MM SODIUM PHOSPHATE PH 6.5, 50 MM NACL, 4 MM DTT
BRUNGER,ADAMS,CLORE,DELANO,GROS, GROSSE- KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ, RICE,SIMONSON,WARREN
refinement
CNS
0.3
structure solution
NMRPipe
structure solution
XEASY
structure solution
ARIA
1.0
structure solution
CNS
0.9
600
Bruker
DRX
750
Bruker
DRX
MET
594
n
1
MET
594
A
ASP
595
n
2
ASP
595
A
GLU
596
n
3
GLU
596
A
ASN
597
n
4
ASN
597
A
ILE
598
n
5
ILE
598
A
ASN
599
n
6
ASN
599
A
PHE
600
n
7
PHE
600
A
LYS
601
n
8
LYS
601
A
GLN
602
n
9
GLN
602
A
SER
603
n
10
SER
603
A
GLU
604
n
11
GLU
604
A
LEU
605
n
12
LEU
605
A
PRO
606
n
13
PRO
606
A
VAL
607
n
14
VAL
607
A
THR
608
n
15
THR
608
A
CYS
609
n
16
CYS
609
A
GLY
610
n
17
GLY
610
A
GLU
611
n
18
GLU
611
A
VAL
612
n
19
VAL
612
A
LYS
613
n
20
LYS
613
A
GLY
614
n
21
GLY
614
A
THR
615
n
22
THR
615
A
LEU
616
n
23
LEU
616
A
TYR
617
n
24
TYR
617
A
LYS
618
n
25
LYS
618
A
GLU
619
n
26
GLU
619
A
ARG
620
n
27
ARG
620
A
PHE
621
n
28
PHE
621
A
LYS
622
n
29
LYS
622
A
GLN
623
n
30
GLN
623
A
GLY
624
n
31
GLY
624
A
THR
625
n
32
THR
625
A
SER
626
n
33
SER
626
A
LYS
627
n
34
LYS
627
A
LYS
628
n
35
LYS
628
A
CYS
629
n
36
CYS
629
A
ILE
630
n
37
ILE
630
A
GLN
631
n
38
GLN
631
A
SER
632
n
39
SER
632
A
GLU
633
n
40
GLU
633
A
ASP
634
n
41
ASP
634
A
LYS
635
n
42
LYS
635
A
LYS
636
n
43
LYS
636
A
TRP
637
n
44
TRP
637
A
PHE
638
n
45
PHE
638
A
THR
639
n
46
THR
639
A
PRO
640
n
47
PRO
640
A
ARG
641
n
48
ARG
641
A
GLU
642
n
49
GLU
642
A
PHE
643
n
50
PHE
643
A
GLU
644
n
51
GLU
644
A
ILE
645
n
52
ILE
645
A
GLU
646
n
53
GLU
646
A
GLY
647
n
54
GLY
647
A
ASP
648
n
55
ASP
648
A
ARG
649
n
56
ARG
649
A
GLY
650
n
57
GLY
650
A
ALA
651
n
58
ALA
651
A
SER
652
n
59
SER
652
A
LYS
653
n
60
LYS
653
A
ASN
654
n
61
ASN
654
A
TRP
655
n
62
TRP
655
A
LYS
656
n
63
LYS
656
A
LEU
657
n
64
LEU
657
A
SER
658
n
65
SER
658
A
ILE
659
n
66
ILE
659
A
ARG
660
n
67
ARG
660
A
CYS
661
n
68
CYS
661
A
GLY
662
n
69
GLY
662
A
GLY
663
n
70
GLY
663
A
TYR
664
n
71
TYR
664
A
THR
665
n
72
THR
665
A
LEU
666
n
73
LEU
666
A
LYS
667
n
74
LYS
667
A
VAL
668
n
75
VAL
668
A
LEU
669
n
76
LEU
669
A
MET
670
n
77
MET
670
A
GLU
671
n
78
GLU
671
A
ASN
672
n
79
ASN
672
A
LYS
673
n
80
LYS
673
A
PHE
674
n
81
PHE
674
A
LEU
675
n
82
LEU
675
A
PRO
676
n
83
PRO
676
A
GLU
677
n
84
GLU
677
A
PRO
678
n
85
PRO
678
A
PRO
679
n
86
PRO
679
A
SER
680
n
87
SER
680
A
THR
681
n
88
THR
681
A
ARG
682
n
89
ARG
682
A
LYS
683
n
90
LYS
683
A
LYS
684
n
91
LYS
684
A
VAL
685
n
92
VAL
685
A
THR
686
n
93
THR
686
A
ILE
687
n
94
ILE
687
A
LYS
688
n
95
LYS
688
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
PHE
638
A
N
PHE
45
A
O
ILE
630
A
O
ILE
37
A
N
GLN
631
A
N
GLN
38
A
O
THR
615
A
O
THR
22
A
N
LEU
616
A
N
LEU
23
A
O
LEU
605
A
O
LEU
12
A
N
THR
608
A
N
THR
15
A
O
ARG
660
A
O
ARG
67
1
A
ASP
595
59.70
179.31
1
A
GLU
596
-129.36
-96.70
1
A
SER
603
69.62
-16.52
1
A
GLU
611
71.69
-5.38
1
A
THR
625
-67.75
7.48
1
A
ASP
648
-94.15
-75.95
1
A
ARG
649
178.96
-39.99
1
A
LYS
653
68.16
-71.67
1
A
ASN
672
-88.94
-75.19
1
A
LYS
673
-176.58
-18.26
1
A
PRO
676
-64.78
-92.73
1
A
GLU
677
61.32
161.07
1
A
PRO
679
-39.35
102.78
1
A
THR
681
-156.89
-87.38
1
A
ARG
682
-174.58
-147.05
1
A
ILE
687
65.82
134.30
2
A
GLU
596
-104.77
-102.88
2
A
SER
603
73.20
-28.54
2
A
GLU
611
69.56
-2.36
2
A
GLU
633
74.76
-55.71
2
A
ASP
634
177.77
-24.94
2
A
LYS
635
-176.25
19.68
2
A
PRO
640
-46.92
-17.82
2
A
ASP
648
-123.62
-77.73
2
A
ARG
649
178.32
-31.04
2
A
LYS
653
65.39
-79.30
2
A
LYS
673
-178.45
-25.59
2
A
LEU
675
38.11
93.66
2
A
SER
680
58.60
87.23
2
A
VAL
685
-78.36
-120.86
2
A
THR
686
57.83
90.36
3
A
ASN
597
-161.61
-36.89
3
A
ASN
599
-71.56
-162.29
3
A
PHE
600
-156.29
-1.30
3
A
GLN
602
-66.85
8.46
3
A
SER
603
73.82
-31.71
3
A
GLU
611
73.91
-4.19
3
A
LYS
622
-49.73
-16.26
3
A
GLU
633
73.78
-55.78
3
A
ASP
634
176.16
-25.38
3
A
LYS
635
-175.89
15.62
3
A
PRO
640
-48.30
-19.95
3
A
ASP
648
-99.71
-75.24
3
A
ARG
649
-175.35
-30.66
3
A
SER
652
-73.70
-147.20
3
A
LYS
653
-178.33
-50.67
3
A
ASN
672
-87.34
-76.09
3
A
LYS
673
171.43
-16.76
3
A
GLU
677
-117.36
74.68
3
A
SER
680
-68.11
-107.73
3
A
LYS
684
55.45
77.58
3
A
VAL
685
60.74
-87.16
3
A
THR
686
-152.31
-13.80
4
A
GLU
596
-102.09
-89.13
4
A
GLU
611
69.03
-1.88
4
A
LYS
622
-49.49
-17.12
4
A
THR
625
-76.53
43.56
4
A
PRO
640
-47.12
-17.85
4
A
ASP
648
-147.27
-78.51
4
A
ARG
649
178.07
-32.63
4
A
LYS
653
63.37
-84.37
4
A
ASN
672
-76.83
-75.06
4
A
LYS
673
168.42
31.06
4
A
GLU
677
74.71
165.16
4
A
LYS
684
65.59
137.23
4
A
THR
686
59.18
78.22
5
A
ASP
595
-70.50
-166.09
5
A
ASN
597
-159.61
-51.25
5
A
ASN
599
-64.17
-178.46
5
A
PHE
600
-142.15
-1.12
5
A
GLU
611
67.50
-2.11
5
A
GLU
633
75.63
-56.02
5
A
ASP
634
176.49
-25.38
5
A
LYS
635
-177.15
18.49
5
A
ASP
648
-155.96
-81.10
5
A
ARG
649
-179.08
-32.25
5
A
LYS
653
64.64
-79.23
5
A
ASN
672
-82.22
-76.65
5
A
LYS
673
167.07
23.56
5
A
PRO
678
-49.78
165.52
5
A
PRO
679
-45.91
155.26
5
A
THR
681
71.36
-54.50
5
A
ARG
682
64.72
169.20
5
A
VAL
685
-85.98
39.11
5
A
THR
686
64.92
158.28
6
A
ASN
597
-146.97
-51.99
6
A
GLN
602
-84.20
-157.83
6
A
GLU
611
68.24
-0.03
6
A
GLU
633
74.63
-55.43
6
A
ASP
634
178.54
-25.34
6
A
LYS
635
-178.06
17.81
6
A
PRO
640
-46.24
-18.42
6
A
LYS
653
63.01
-83.12
6
A
ASN
672
-81.78
-73.83
6
A
LYS
673
163.42
31.61
6
A
PRO
676
-86.28
-85.22
6
A
PRO
678
-43.12
109.77
6
A
PRO
679
-37.55
144.27
6
A
THR
681
50.05
92.00
7
A
ASP
595
-167.47
114.48
7
A
GLU
596
-176.79
-71.26
7
A
ASN
599
-82.94
-150.43
7
A
PHE
600
-148.02
-1.13
7
A
GLU
611
67.11
-1.27
7
A
LYS
622
-49.38
-15.49
7
A
THR
625
-69.26
23.12
7
A
PRO
640
-47.28
-17.73
7
A
ASP
648
-70.17
-76.28
7
A
ARG
649
173.52
-31.56
7
A
SER
652
-75.28
-145.09
7
A
LYS
653
-178.50
-56.13
7
A
ASN
672
-90.68
-78.62
7
A
LYS
673
-170.00
9.37
7
A
LEU
675
-47.22
150.72
7
A
THR
681
-167.55
14.69
7
A
ARG
682
-159.92
3.71
7
A
VAL
685
65.87
129.91
7
A
ILE
687
59.97
99.16
8
A
GLU
596
74.73
-62.21
8
A
ILE
598
-109.14
70.09
8
A
GLN
602
-71.13
-162.82
8
A
GLU
611
69.94
-1.75
8
A
PRO
640
-48.43
-15.72
8
A
ASP
648
-98.39
-65.81
8
A
ARG
649
-179.42
-38.81
8
A
LYS
653
70.79
-70.43
8
A
ASN
654
-56.33
95.89
8
A
ASN
672
-79.90
-74.30
8
A
LYS
673
177.25
-23.17
8
A
PRO
676
-49.12
-83.39
8
A
GLU
677
41.08
88.36
8
A
SER
680
-163.49
80.84
8
A
THR
681
-154.04
-59.53
8
A
ARG
682
56.86
-161.77
8
A
LYS
683
-143.17
-60.89
9
A
ASP
595
-79.44
-162.29
9
A
ASN
599
-78.81
-167.54
9
A
PHE
600
-153.19
-1.24
9
A
SER
603
72.28
-28.05
9
A
GLU
611
73.59
-3.75
9
A
CYS
629
-153.62
3.45
9
A
GLU
633
72.78
-56.08
9
A
ASP
634
175.25
-24.67
9
A
LYS
635
-172.72
17.76
9
A
ASP
648
-146.78
-78.23
9
A
ARG
649
-171.65
-47.84
9
A
ASN
672
-84.85
-77.70
9
A
LYS
673
172.62
32.80
9
A
GLU
677
-53.45
106.80
9
A
SER
680
-177.60
94.81
9
A
THR
681
-160.29
-60.94
9
A
LYS
683
57.53
-151.07
9
A
ILE
687
-92.12
-63.26
10
A
ASP
595
59.49
174.65
10
A
ASN
597
-165.18
-49.37
10
A
GLU
611
67.46
-2.62
10
A
THR
625
-74.73
39.54
10
A
GLU
633
74.96
-55.86
10
A
ASP
634
176.60
-25.14
10
A
LYS
635
-177.20
17.34
10
A
PRO
640
-46.14
-17.79
10
A
ASP
648
-142.24
-78.41
10
A
ARG
649
175.49
-43.52
10
A
LYS
653
63.35
-80.30
10
A
ASN
654
-66.77
94.89
10
A
ASN
672
-79.24
-75.64
10
A
LYS
673
170.76
-19.31
10
A
SER
680
63.19
-83.63
10
A
THR
681
63.56
97.24
10
A
ARG
682
-112.12
-86.49
10
A
LYS
683
-166.35
-69.15
Solution structure of the human Sp100b SAND domain by heteronuclear NMR.
1
N
N
A
GLU
619
A
GLU
26
HELX_P
A
LYS
622
A
LYS
29
1
1
4
A
ARG
641
A
ARG
48
HELX_P
A
GLY
647
A
GLY
54
1
2
7
A
TRP
655
A
TRP
62
HELX_P
A
SER
658
A
SER
65
1
3
4
A
THR
665
A
THR
72
HELX_P
A
ASN
672
A
ASN
79
1
4
8
NUCLEAR PROTEIN
TRANSCRIPTION, DNA BINDING, SP100B, SAND DOMAIN, KDWK, ANTIGEN, NUCLEAR PROTEIN, ALTERNATIVE SPLICING
1H5P
PDB
1
1H5P
SP10_HUMAN
UNP
1
P23497
594
594
1H5P
594
594
1H5P
A
1
1
1
595
688
1H5P
595
688
P23497
A
2
2
95
1
ARG
variant
VAL
685
1H5P
A
P23497
UNP
685
92
1
ILE
variant
THR
686
1H5P
A
P23497
UNP
686
93
1
LEU
variant
ILE
687
1H5P
A
P23497
UNP
687
94
1
GLU
variant
LYS
688
1H5P
A
P23497
UNP
688
95
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LYS
636
A
LYS
43
A
PHE
638
A
PHE
45
A
ILE
630
A
ILE
37
A
SER
632
A
SER
39
A
LYS
613
A
LYS
20
A
TYR
617
A
TYR
24
A
GLU
604
A
GLU
11
A
THR
608
A
THR
15
A
ILE
659
A
ILE
66
A
CYS
661
A
CYS
68
1
P 1