0.016753 0.000000 0.000000 0.000000 0.011130 0.000000 0.000000 0.000000 0.010282 0.00000 0.00000 0.00000 Burmester, J. Spinelli, S. Pugliese, L. Krebber, A. Honegger, A. Jung, S. Schimmele, B. Cambillau, C. Pluckthun, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 59.690 89.850 97.260 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 309 671 10.1006/JMBI.2001.4663 11397088 Selection, Characterization and X-Ray Structure of Anti-Ampicillin Single-Chain Fv Fragments from Phage-Displayed Murine Antibody Libraries 2001 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.0 1 IMAGE PLATE SINGLE WAVELENGTH M x-ray 1 1.54178 1.0 1.54178 ROTATING ANODE RIGAKU SINGLE CHAIN FV ANTIBODY IN WHICH THE VL AND VH FRAGMENTS ARE JOINED BY A GGGGSGGGGSGGGGSGGGGS LINKER 27006.734 MUTANT AL2 6E7P9G FV FRAGMENT 2 man polymer 96.063 SULFATE ION 2 syn non-polymer 18.015 water 110 nat water no no DYKDIVLTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISN VQSEDLADYFCQQYSSYPLTFGAGTKLELKRGGGGSGGGGSGGGGSGGGGSQVQLQEPGGELVRPGASVKLSCKASGYTF TSYWINWVKQRPGQGLEWIGNIYPSDSYTNYNQKFKDKATLTVDKSSSTAYMQLSSLTSEDSAVYFCARWGYWGQGTLVT VSAASGAHHHHH DYKDIVLTQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISN VQSEDLADYFCQQYSSYPLTFGAGTKLELKRGGGGSGGGGSGGGGSGGGGSQVQLQEPGGELVRPGASVKLSCKASGYTF TSYWINWVKQRPGQGLEWIGNIYPSDSYTNYNQKFKDKATLTVDKSSSTAYMQLSSLTSEDSAVYFCARWGYWGQGTLVT VSAASGAHHHHH A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 10090 MUS MUSCULUS 83333 ESCHERICHIA COLI K-12 RV308 PLASMID PAK3000 2.4 49.05 5.00 pH 5.00 repository Initial release 1 0 2001-08-02 THREE-DIMENSIONAL STRUCTURE OF ANTI-AMPICILLIN SINGLE CHAIN FV FRAGMENT FROM PHAGE-DISPLAYED MURINE ANTIBODY LIBRARIES THREE-DIMENSIONAL STRUCTURE OF ANTI-AMPICILLIN SINGLE CHAIN FV FRAGMENT COMPLEXED WITH THE HAPTEN. PDBE Y PDBE 2001-02-14 REL 1 A O HOH 2005 6.53 1 B O HOH 2003 6.13 SO4 SULFATE ION HOH water SO4 1000 2 SO4 SO4 1000 A SO4 1001 2 SO4 SO4 1001 A HOH 2001 3 HOH HOH 2001 A HOH 2002 3 HOH HOH 2002 A HOH 2003 3 HOH HOH 2003 A HOH 2004 3 HOH HOH 2004 A HOH 2005 3 HOH HOH 2005 A HOH 2006 3 HOH HOH 2006 A HOH 2007 3 HOH HOH 2007 A HOH 2008 3 HOH HOH 2008 A HOH 2009 3 HOH HOH 2009 A HOH 2010 3 HOH HOH 2010 A HOH 2011 3 HOH HOH 2011 A HOH 2012 3 HOH HOH 2012 A HOH 2013 3 HOH HOH 2013 A HOH 2014 3 HOH HOH 2014 A HOH 2015 3 HOH HOH 2015 A HOH 2016 3 HOH HOH 2016 A HOH 2017 3 HOH HOH 2017 A HOH 2018 3 HOH HOH 2018 A HOH 2019 3 HOH HOH 2019 A HOH 2020 3 HOH HOH 2020 A HOH 2021 3 HOH HOH 2021 A HOH 2022 3 HOH HOH 2022 A HOH 2023 3 HOH HOH 2023 A HOH 2024 3 HOH HOH 2024 A HOH 2025 3 HOH HOH 2025 A HOH 2026 3 HOH HOH 2026 A HOH 2027 3 HOH HOH 2027 A HOH 2028 3 HOH HOH 2028 A HOH 2029 3 HOH HOH 2029 A HOH 2030 3 HOH HOH 2030 A HOH 2031 3 HOH HOH 2031 A HOH 2032 3 HOH HOH 2032 A HOH 2033 3 HOH HOH 2033 A HOH 2034 3 HOH HOH 2034 A HOH 2035 3 HOH HOH 2035 A HOH 2036 3 HOH HOH 2036 A HOH 2037 3 HOH HOH 2037 A HOH 2038 3 HOH HOH 2038 A HOH 2039 3 HOH HOH 2039 A HOH 2040 3 HOH HOH 2040 A HOH 2041 3 HOH HOH 2041 A HOH 2042 3 HOH HOH 2042 A HOH 2043 3 HOH HOH 2043 A HOH 2044 3 HOH HOH 2044 A HOH 2045 3 HOH HOH 2045 A HOH 2046 3 HOH HOH 2046 A HOH 2047 3 HOH HOH 2047 A HOH 2048 3 HOH HOH 2048 A HOH 2049 3 HOH HOH 2049 A HOH 2050 3 HOH HOH 2050 A HOH 2051 3 HOH HOH 2051 A HOH 2052 3 HOH HOH 2052 A HOH 2053 3 HOH HOH 2053 A HOH 2054 3 HOH HOH 2054 A HOH 2055 3 HOH HOH 2055 A HOH 2056 3 HOH HOH 2056 A HOH 2057 3 HOH HOH 2057 A HOH 2058 3 HOH HOH 2058 A HOH 2059 3 HOH HOH 2059 A HOH 2060 3 HOH HOH 2060 A HOH 2061 3 HOH HOH 2061 A HOH 2062 3 HOH HOH 2062 A HOH 2063 3 HOH HOH 2063 A HOH 2064 3 HOH HOH 2064 A HOH 2065 3 HOH HOH 2065 A HOH 2066 3 HOH HOH 2066 A HOH 2067 3 HOH HOH 2067 A HOH 2068 3 HOH HOH 2068 A HOH 2069 3 HOH HOH 2069 A HOH 2001 3 HOH HOH 2001 B HOH 2002 3 HOH HOH 2002 B HOH 2003 3 HOH HOH 2003 B HOH 2004 3 HOH HOH 2004 B HOH 2005 3 HOH HOH 2005 B HOH 2006 3 HOH HOH 2006 B HOH 2007 3 HOH HOH 2007 B HOH 2008 3 HOH HOH 2008 B HOH 2009 3 HOH HOH 2009 B HOH 2010 3 HOH HOH 2010 B HOH 2011 3 HOH HOH 2011 B HOH 2012 3 HOH HOH 2012 B HOH 2013 3 HOH HOH 2013 B HOH 2014 3 HOH HOH 2014 B HOH 2015 3 HOH HOH 2015 B HOH 2016 3 HOH HOH 2016 B HOH 2017 3 HOH HOH 2017 B HOH 2018 3 HOH HOH 2018 B HOH 2019 3 HOH HOH 2019 B HOH 2020 3 HOH HOH 2020 B HOH 2021 3 HOH HOH 2021 B HOH 2022 3 HOH HOH 2022 B HOH 2023 3 HOH HOH 2023 B HOH 2024 3 HOH HOH 2024 B HOH 2025 3 HOH HOH 2025 B HOH 2026 3 HOH HOH 2026 B HOH 2027 3 HOH HOH 2027 B HOH 2028 3 HOH HOH 2028 B HOH 2029 3 HOH HOH 2029 B HOH 2030 3 HOH HOH 2030 B HOH 2031 3 HOH HOH 2031 B HOH 2032 3 HOH HOH 2032 B HOH 2033 3 HOH HOH 2033 B HOH 2034 3 HOH HOH 2034 B HOH 2035 3 HOH HOH 2035 B HOH 2036 3 HOH HOH 2036 B HOH 2037 3 HOH HOH 2037 B HOH 2038 3 HOH HOH 2038 B HOH 2039 3 HOH HOH 2039 B HOH 2040 3 HOH HOH 2040 B HOH 2041 3 HOH HOH 2041 B n 1 1 A n 2 2 A n 3 3 A ASP 4 n 4 ASP 4 A ILE 5 n 5 ILE 5 A VAL 6 n 6 VAL 6 A LEU 7 n 7 LEU 7 A THR 8 n 8 THR 8 A GLN 9 n 9 GLN 9 A SER 10 n 10 SER 10 A HIS 11 n 11 HIS 11 A LYS 12 n 12 LYS 12 A PHE 13 n 13 PHE 13 A MET 14 n 14 MET 14 A SER 15 n 15 SER 15 A THR 16 n 16 THR 16 A SER 17 n 17 SER 17 A VAL 18 n 18 VAL 18 A GLY 19 n 19 GLY 19 A ASP 20 n 20 ASP 20 A ARG 21 n 21 ARG 21 A VAL 22 n 22 VAL 22 A SER 23 n 23 SER 23 A ILE 24 n 24 ILE 24 A THR 25 n 25 THR 25 A CYS 26 n 26 CYS 26 A LYS 27 n 27 LYS 27 A ALA 28 n 28 ALA 28 A SER 29 n 29 SER 29 A GLN 30 n 30 GLN 30 A ASP 31 n 31 ASP 31 A VAL 32 n 32 VAL 32 A GLY 33 n 33 GLY 33 A THR 34 n 34 THR 34 A ALA 35 n 35 ALA 35 A VAL 36 n 36 VAL 36 A ALA 37 n 37 ALA 37 A TRP 38 n 38 TRP 38 A TYR 39 n 39 TYR 39 A GLN 40 n 40 GLN 40 A GLN 41 n 41 GLN 41 A LYS 42 n 42 LYS 42 A PRO 43 n 43 PRO 43 A GLY 44 n 44 GLY 44 A GLN 45 n 45 GLN 45 A SER 46 n 46 SER 46 A PRO 47 n 47 PRO 47 A LYS 48 n 48 LYS 48 A LEU 49 n 49 LEU 49 A LEU 50 n 50 LEU 50 A ILE 51 n 51 ILE 51 A TYR 52 n 52 TYR 52 A TRP 53 n 53 TRP 53 A ALA 54 n 54 ALA 54 A SER 55 n 55 SER 55 A THR 56 n 56 THR 56 A ARG 57 n 57 ARG 57 A HIS 58 n 58 HIS 58 A THR 59 n 59 THR 59 A GLY 60 n 60 GLY 60 A VAL 61 n 61 VAL 61 A PRO 62 n 62 PRO 62 A ASP 63 n 63 ASP 63 A ARG 64 n 64 ARG 64 A PHE 65 n 65 PHE 65 A THR 66 n 66 THR 66 A GLY 67 n 67 GLY 67 A SER 68 n 68 SER 68 A GLY 69 n 69 GLY 69 A SER 70 n 70 SER 70 A GLY 71 n 71 GLY 71 A THR 72 n 72 THR 72 A ASP 73 n 73 ASP 73 A PHE 74 n 74 PHE 74 A THR 75 n 75 THR 75 A LEU 76 n 76 LEU 76 A THR 77 n 77 THR 77 A ILE 78 n 78 ILE 78 A SER 79 n 79 SER 79 A ASN 80 n 80 ASN 80 A VAL 81 n 81 VAL 81 A GLN 82 n 82 GLN 82 A SER 83 n 83 SER 83 A GLU 84 n 84 GLU 84 A ASP 85 n 85 ASP 85 A LEU 86 n 86 LEU 86 A ALA 87 n 87 ALA 87 A ASP 88 n 88 ASP 88 A TYR 89 n 89 TYR 89 A PHE 90 n 90 PHE 90 A CYS 91 n 91 CYS 91 A GLN 92 n 92 GLN 92 A GLN 93 n 93 GLN 93 A TYR 94 n 94 TYR 94 A SER 95 n 95 SER 95 A SER 96 n 96 SER 96 A TYR 97 n 97 TYR 97 A PRO 98 n 98 PRO 98 A LEU 99 n 99 LEU 99 A THR 100 n 100 THR 100 A PHE 101 n 101 PHE 101 A GLY 102 n 102 GLY 102 A ALA 103 n 103 ALA 103 A GLY 104 n 104 GLY 104 A THR 105 n 105 THR 105 A LYS 106 n 106 LYS 106 A LEU 107 n 107 LEU 107 A GLU 108 n 108 GLU 108 A LEU 109 n 109 LEU 109 A LYS 110 n 110 LYS 110 A ARG 111 n 111 ARG 111 A n 112 112 A n 113 113 A n 114 114 A n 115 115 A n 116 116 A n 117 117 A n 118 118 A n 119 119 A n 120 120 A n 121 121 A n 122 122 A n 123 123 A n 124 124 A n 125 125 A n 126 126 A n 127 127 A n 128 128 A n 129 129 A n 130 130 A n 131 131 A GLN 132 n 132 GLN 132 A VAL 133 n 133 VAL 133 A GLN 134 n 134 GLN 134 A LEU 135 n 135 LEU 135 A GLN 136 n 136 GLN 136 A GLU 137 n 137 GLU 137 A PRO 138 n 138 PRO 138 A GLY 139 n 139 GLY 139 A GLY 140 n 140 GLY 140 A GLU 141 n 141 GLU 141 A LEU 142 n 142 LEU 142 A VAL 143 n 143 VAL 143 A ARG 144 n 144 ARG 144 A PRO 145 n 145 PRO 145 A GLY 146 n 146 GLY 146 A ALA 147 n 147 ALA 147 A SER 148 n 148 SER 148 A VAL 149 n 149 VAL 149 A LYS 150 n 150 LYS 150 A LEU 151 n 151 LEU 151 A SER 152 n 152 SER 152 A CYS 153 n 153 CYS 153 A LYS 154 n 154 LYS 154 A ALA 155 n 155 ALA 155 A SER 156 n 156 SER 156 A GLY 157 n 157 GLY 157 A TYR 158 n 158 TYR 158 A THR 159 n 159 THR 159 A PHE 160 n 160 PHE 160 A THR 161 n 161 THR 161 A SER 162 n 162 SER 162 A TYR 163 n 163 TYR 163 A TRP 164 n 164 TRP 164 A ILE 165 n 165 ILE 165 A ASN 166 n 166 ASN 166 A TRP 167 n 167 TRP 167 A VAL 168 n 168 VAL 168 A LYS 169 n 169 LYS 169 A GLN 170 n 170 GLN 170 A ARG 171 n 171 ARG 171 A PRO 172 n 172 PRO 172 A GLY 173 n 173 GLY 173 A GLN 174 n 174 GLN 174 A GLY 175 n 175 GLY 175 A LEU 176 n 176 LEU 176 A GLU 177 n 177 GLU 177 A TRP 178 n 178 TRP 178 A ILE 179 n 179 ILE 179 A GLY 180 n 180 GLY 180 A ASN 181 n 181 ASN 181 A ILE 182 n 182 ILE 182 A TYR 183 n 183 TYR 183 A PRO 184 n 184 PRO 184 A SER 185 n 185 SER 185 A ASP 186 n 186 ASP 186 A SER 187 n 187 SER 187 A TYR 188 n 188 TYR 188 A THR 189 n 189 THR 189 A ASN 190 n 190 ASN 190 A TYR 191 n 191 TYR 191 A ASN 192 n 192 ASN 192 A GLN 193 n 193 GLN 193 A LYS 194 n 194 LYS 194 A PHE 195 n 195 PHE 195 A LYS 196 n 196 LYS 196 A ASP 197 n 197 ASP 197 A LYS 198 n 198 LYS 198 A ALA 199 n 199 ALA 199 A THR 200 n 200 THR 200 A LEU 201 n 201 LEU 201 A THR 202 n 202 THR 202 A VAL 203 n 203 VAL 203 A ASP 204 n 204 ASP 204 A LYS 205 n 205 LYS 205 A SER 206 n 206 SER 206 A SER 207 n 207 SER 207 A SER 208 n 208 SER 208 A THR 209 n 209 THR 209 A ALA 210 n 210 ALA 210 A TYR 211 n 211 TYR 211 A MET 212 n 212 MET 212 A GLN 213 n 213 GLN 213 A LEU 214 n 214 LEU 214 A SER 215 n 215 SER 215 A SER 216 n 216 SER 216 A LEU 217 n 217 LEU 217 A THR 218 n 218 THR 218 A SER 219 n 219 SER 219 A GLU 220 n 220 GLU 220 A ASP 221 n 221 ASP 221 A SER 222 n 222 SER 222 A ALA 223 n 223 ALA 223 A VAL 224 n 224 VAL 224 A TYR 225 n 225 TYR 225 A PHE 226 n 226 PHE 226 A CYS 227 n 227 CYS 227 A ALA 228 n 228 ALA 228 A ARG 229 n 229 ARG 229 A TRP 230 n 230 TRP 230 A GLY 231 n 231 GLY 231 A TYR 232 n 232 TYR 232 A TRP 233 n 233 TRP 233 A GLY 234 n 234 GLY 234 A GLN 235 n 235 GLN 235 A GLY 236 n 236 GLY 236 A THR 237 n 237 THR 237 A LEU 238 n 238 LEU 238 A VAL 239 n 239 VAL 239 A THR 240 n 240 THR 240 A VAL 241 n 241 VAL 241 A SER 242 n 242 SER 242 A ALA 243 n 243 ALA 243 A n 244 244 A n 245 245 A n 246 246 A n 247 247 A n 248 248 A n 249 249 A n 250 250 A n 251 251 A n 252 252 A n 1 1 B n 2 2 B n 3 3 B ASP 4 n 4 ASP 4 B ILE 5 n 5 ILE 5 B VAL 6 n 6 VAL 6 B LEU 7 n 7 LEU 7 B THR 8 n 8 THR 8 B GLN 9 n 9 GLN 9 B SER 10 n 10 SER 10 B HIS 11 n 11 HIS 11 B LYS 12 n 12 LYS 12 B PHE 13 n 13 PHE 13 B MET 14 n 14 MET 14 B SER 15 n 15 SER 15 B THR 16 n 16 THR 16 B SER 17 n 17 SER 17 B VAL 18 n 18 VAL 18 B GLY 19 n 19 GLY 19 B ASP 20 n 20 ASP 20 B ARG 21 n 21 ARG 21 B VAL 22 n 22 VAL 22 B SER 23 n 23 SER 23 B ILE 24 n 24 ILE 24 B THR 25 n 25 THR 25 B CYS 26 n 26 CYS 26 B LYS 27 n 27 LYS 27 B ALA 28 n 28 ALA 28 B SER 29 n 29 SER 29 B GLN 30 n 30 GLN 30 B ASP 31 n 31 ASP 31 B VAL 32 n 32 VAL 32 B GLY 33 n 33 GLY 33 B THR 34 n 34 THR 34 B ALA 35 n 35 ALA 35 B VAL 36 n 36 VAL 36 B ALA 37 n 37 ALA 37 B TRP 38 n 38 TRP 38 B TYR 39 n 39 TYR 39 B GLN 40 n 40 GLN 40 B GLN 41 n 41 GLN 41 B LYS 42 n 42 LYS 42 B PRO 43 n 43 PRO 43 B GLY 44 n 44 GLY 44 B GLN 45 n 45 GLN 45 B SER 46 n 46 SER 46 B PRO 47 n 47 PRO 47 B LYS 48 n 48 LYS 48 B LEU 49 n 49 LEU 49 B LEU 50 n 50 LEU 50 B ILE 51 n 51 ILE 51 B TYR 52 n 52 TYR 52 B TRP 53 n 53 TRP 53 B ALA 54 n 54 ALA 54 B SER 55 n 55 SER 55 B THR 56 n 56 THR 56 B ARG 57 n 57 ARG 57 B HIS 58 n 58 HIS 58 B THR 59 n 59 THR 59 B GLY 60 n 60 GLY 60 B VAL 61 n 61 VAL 61 B PRO 62 n 62 PRO 62 B ASP 63 n 63 ASP 63 B ARG 64 n 64 ARG 64 B PHE 65 n 65 PHE 65 B THR 66 n 66 THR 66 B GLY 67 n 67 GLY 67 B SER 68 n 68 SER 68 B GLY 69 n 69 GLY 69 B SER 70 n 70 SER 70 B GLY 71 n 71 GLY 71 B THR 72 n 72 THR 72 B ASP 73 n 73 ASP 73 B PHE 74 n 74 PHE 74 B THR 75 n 75 THR 75 B LEU 76 n 76 LEU 76 B THR 77 n 77 THR 77 B ILE 78 n 78 ILE 78 B SER 79 n 79 SER 79 B ASN 80 n 80 ASN 80 B VAL 81 n 81 VAL 81 B GLN 82 n 82 GLN 82 B SER 83 n 83 SER 83 B GLU 84 n 84 GLU 84 B ASP 85 n 85 ASP 85 B LEU 86 n 86 LEU 86 B ALA 87 n 87 ALA 87 B ASP 88 n 88 ASP 88 B TYR 89 n 89 TYR 89 B PHE 90 n 90 PHE 90 B CYS 91 n 91 CYS 91 B GLN 92 n 92 GLN 92 B GLN 93 n 93 GLN 93 B TYR 94 n 94 TYR 94 B SER 95 n 95 SER 95 B SER 96 n 96 SER 96 B TYR 97 n 97 TYR 97 B PRO 98 n 98 PRO 98 B LEU 99 n 99 LEU 99 B THR 100 n 100 THR 100 B PHE 101 n 101 PHE 101 B GLY 102 n 102 GLY 102 B ALA 103 n 103 ALA 103 B GLY 104 n 104 GLY 104 B THR 105 n 105 THR 105 B LYS 106 n 106 LYS 106 B LEU 107 n 107 LEU 107 B GLU 108 n 108 GLU 108 B LEU 109 n 109 LEU 109 B LYS 110 n 110 LYS 110 B ARG 111 n 111 ARG 111 B GLY 112 n 112 GLY 112 B n 113 113 B n 114 114 B n 115 115 B n 116 116 B n 117 117 B n 118 118 B n 119 119 B n 120 120 B n 121 121 B n 122 122 B n 123 123 B n 124 124 B n 125 125 B n 126 126 B n 127 127 B n 128 128 B n 129 129 B n 130 130 B n 131 131 B n 132 132 B VAL 133 n 133 VAL 133 B GLN 134 n 134 GLN 134 B LEU 135 n 135 LEU 135 B GLN 136 n 136 GLN 136 B GLU 137 n 137 GLU 137 B PRO 138 n 138 PRO 138 B GLY 139 n 139 GLY 139 B GLY 140 n 140 GLY 140 B GLU 141 n 141 GLU 141 B LEU 142 n 142 LEU 142 B VAL 143 n 143 VAL 143 B ARG 144 n 144 ARG 144 B PRO 145 n 145 PRO 145 B GLY 146 n 146 GLY 146 B ALA 147 n 147 ALA 147 B SER 148 n 148 SER 148 B VAL 149 n 149 VAL 149 B LYS 150 n 150 LYS 150 B LEU 151 n 151 LEU 151 B SER 152 n 152 SER 152 B CYS 153 n 153 CYS 153 B LYS 154 n 154 LYS 154 B ALA 155 n 155 ALA 155 B SER 156 n 156 SER 156 B GLY 157 n 157 GLY 157 B TYR 158 n 158 TYR 158 B THR 159 n 159 THR 159 B PHE 160 n 160 PHE 160 B THR 161 n 161 THR 161 B SER 162 n 162 SER 162 B TYR 163 n 163 TYR 163 B TRP 164 n 164 TRP 164 B ILE 165 n 165 ILE 165 B ASN 166 n 166 ASN 166 B TRP 167 n 167 TRP 167 B VAL 168 n 168 VAL 168 B LYS 169 n 169 LYS 169 B GLN 170 n 170 GLN 170 B ARG 171 n 171 ARG 171 B PRO 172 n 172 PRO 172 B GLY 173 n 173 GLY 173 B GLN 174 n 174 GLN 174 B GLY 175 n 175 GLY 175 B LEU 176 n 176 LEU 176 B GLU 177 n 177 GLU 177 B TRP 178 n 178 TRP 178 B ILE 179 n 179 ILE 179 B GLY 180 n 180 GLY 180 B ASN 181 n 181 ASN 181 B ILE 182 n 182 ILE 182 B TYR 183 n 183 TYR 183 B PRO 184 n 184 PRO 184 B SER 185 n 185 SER 185 B ASP 186 n 186 ASP 186 B SER 187 n 187 SER 187 B TYR 188 n 188 TYR 188 B THR 189 n 189 THR 189 B ASN 190 n 190 ASN 190 B TYR 191 n 191 TYR 191 B ASN 192 n 192 ASN 192 B GLN 193 n 193 GLN 193 B LYS 194 n 194 LYS 194 B PHE 195 n 195 PHE 195 B LYS 196 n 196 LYS 196 B ASP 197 n 197 ASP 197 B LYS 198 n 198 LYS 198 B ALA 199 n 199 ALA 199 B THR 200 n 200 THR 200 B LEU 201 n 201 LEU 201 B THR 202 n 202 THR 202 B VAL 203 n 203 VAL 203 B ASP 204 n 204 ASP 204 B LYS 205 n 205 LYS 205 B SER 206 n 206 SER 206 B SER 207 n 207 SER 207 B SER 208 n 208 SER 208 B THR 209 n 209 THR 209 B ALA 210 n 210 ALA 210 B TYR 211 n 211 TYR 211 B MET 212 n 212 MET 212 B GLN 213 n 213 GLN 213 B LEU 214 n 214 LEU 214 B SER 215 n 215 SER 215 B SER 216 n 216 SER 216 B LEU 217 n 217 LEU 217 B THR 218 n 218 THR 218 B SER 219 n 219 SER 219 B GLU 220 n 220 GLU 220 B ASP 221 n 221 ASP 221 B SER 222 n 222 SER 222 B ALA 223 n 223 ALA 223 B VAL 224 n 224 VAL 224 B TYR 225 n 225 TYR 225 B PHE 226 n 226 PHE 226 B CYS 227 n 227 CYS 227 B ALA 228 n 228 ALA 228 B ARG 229 n 229 ARG 229 B TRP 230 n 230 TRP 230 B GLY 231 n 231 GLY 231 B TYR 232 n 232 TYR 232 B TRP 233 n 233 TRP 233 B GLY 234 n 234 GLY 234 B GLN 235 n 235 GLN 235 B GLY 236 n 236 GLY 236 B THR 237 n 237 THR 237 B LEU 238 n 238 LEU 238 B VAL 239 n 239 VAL 239 B THR 240 n 240 THR 240 B VAL 241 n 241 VAL 241 B SER 242 n 242 SER 242 B ALA 243 n 243 ALA 243 B n 244 244 B n 245 245 B n 246 246 B n 247 247 B n 248 248 B n 249 249 B n 250 250 B n 251 251 B n 252 252 B author_and_software_defined_assembly PQS 1 monomeric author_and_software_defined_assembly PQS 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N THR 8 A N THR 8 A O LYS 27 A O LYS 27 A N CYS 26 A N CYS 26 A O PHE 74 A O PHE 74 A N THR 77 A N THR 77 A O THR 66 A O THR 66 A N MET 14 A N MET 14 A O LYS 106 A O LYS 106 A N THR 105 A N THR 105 A O TYR 89 A O TYR 89 A N GLN 92 A N GLN 92 A O ALA 37 A O ALA 37 A N GLN 40 A N GLN 40 A O LYS 48 A O LYS 48 A N TYR 52 A N TYR 52 A O THR 56 A O THR 56 A N MET 14 A N MET 14 A O LYS 106 A O LYS 106 A N THR 105 A N THR 105 A O TYR 89 A O TYR 89 A N GLN 93 A N GLN 93 A O THR 100 A O THR 100 A N GLU 141 A N GLU 141 A O LEU 238 A O LEU 238 A N VAL 239 A N VAL 239 A O ALA 223 A O ALA 223 A N ALA 228 A N ALA 228 A O ASN 166 A O ASN 166 A N LYS 169 A N LYS 169 A O GLU 177 A O GLU 177 A N ASN 181 A N ASN 181 A O ASN 190 A O ASN 190 A N GLU 141 A N GLU 141 A O LEU 238 A O LEU 238 A N VAL 239 A N VAL 239 A O ALA 223 A O ALA 223 A N ARG 229 A N ARG 229 A O TYR 232 A O TYR 232 A N CYS 153 A N CYS 153 A O ALA 210 A O ALA 210 A N TYR 211 A N TYR 211 A O THR 202 A O THR 202 B N THR 8 B N THR 8 B O LYS 27 B O LYS 27 B N CYS 26 B N CYS 26 B O PHE 74 B O PHE 74 B N THR 77 B N THR 77 B O THR 66 B O THR 66 B N MET 14 B N MET 14 B O LYS 106 B O LYS 106 B N THR 105 B N THR 105 B O TYR 89 B O TYR 89 B N GLN 92 B N GLN 92 B O ALA 37 B O ALA 37 B N GLN 40 B N GLN 40 B O LYS 48 B O LYS 48 B N TYR 52 B N TYR 52 B O THR 56 B O THR 56 B N MET 14 B N MET 14 B O LYS 106 B O LYS 106 B N THR 105 B N THR 105 B O TYR 89 B O TYR 89 B N GLN 93 B N GLN 93 B O THR 100 B O THR 100 B N GLU 141 B N GLU 141 B O LEU 238 B O LEU 238 B N VAL 239 B N VAL 239 B O ALA 223 B O ALA 223 B N ALA 228 B N ALA 228 B O ASN 166 B O ASN 166 B N LYS 169 B N LYS 169 B O GLU 177 B O GLU 177 B N ASN 181 B N ASN 181 B O ASN 190 B O ASN 190 B N GLU 141 B N GLU 141 B O LEU 238 B O LEU 238 B N VAL 239 B N VAL 239 B O ALA 223 B O ALA 223 B N ARG 229 B N ARG 229 B O TYR 232 B O TYR 232 B N CYS 153 B N CYS 153 B O ALA 210 B O ALA 210 B N GLN 213 B N GLN 213 B O THR 200 B O THR 200 1 A CG LYS 110 A CG LYS 110 1 Y 1 A CD LYS 110 A CD LYS 110 1 Y 1 A CE LYS 110 A CE LYS 110 1 Y 1 A NZ LYS 110 A NZ LYS 110 1 Y 1 A CA ARG 111 A CA ARG 111 1 Y 1 A C ARG 111 A C ARG 111 1 Y 1 A O ARG 111 A O ARG 111 1 Y 1 A CB ARG 111 A CB ARG 111 1 Y 1 A CG ARG 111 A CG ARG 111 1 Y 1 A CD ARG 111 A CD ARG 111 1 Y 1 A NE ARG 111 A NE ARG 111 1 Y 1 A CZ ARG 111 A CZ ARG 111 1 Y 1 A NH1 ARG 111 A NH1 ARG 111 1 Y 1 A NH2 ARG 111 A NH2 ARG 111 1 Y 1 A CG GLN 132 A CG GLN 132 1 Y 1 A CD GLN 132 A CD GLN 132 1 Y 1 A OE1 GLN 132 A OE1 GLN 132 1 Y 1 A NE2 GLN 132 A NE2 GLN 132 1 Y 1 A CA ALA 243 A CA ALA 243 1 Y 1 A C ALA 243 A C ALA 243 1 Y 1 A O ALA 243 A O ALA 243 1 Y 1 A CB ALA 243 A CB ALA 243 1 Y 1 B CA GLY 112 B CA GLY 112 1 Y 1 B C GLY 112 B C GLY 112 1 Y 1 B O GLY 112 B O GLY 112 1 Y 1 B CA ALA 243 B CA ALA 243 1 Y 1 B C ALA 243 B C ALA 243 1 Y 1 B O ALA 243 B O ALA 243 1 Y 1 B CB ALA 243 B CB ALA 243 1 Y 1 A ASP 1 A ASP 1 1 Y 1 A TYR 2 A TYR 2 1 Y 1 A LYS 3 A LYS 3 1 Y 1 A GLY 112 A GLY 112 1 Y 1 A GLY 113 A GLY 113 1 Y 1 A GLY 114 A GLY 114 1 Y 1 A GLY 115 A GLY 115 1 Y 1 A SER 116 A SER 116 1 Y 1 A GLY 117 A GLY 117 1 Y 1 A GLY 118 A GLY 118 1 Y 1 A GLY 119 A GLY 119 1 Y 1 A GLY 120 A GLY 120 1 Y 1 A SER 121 A SER 121 1 Y 1 A GLY 122 A GLY 122 1 Y 1 A GLY 123 A GLY 123 1 Y 1 A GLY 124 A GLY 124 1 Y 1 A GLY 125 A GLY 125 1 Y 1 A SER 126 A SER 126 1 Y 1 A GLY 127 A GLY 127 1 Y 1 A GLY 128 A GLY 128 1 Y 1 A GLY 129 A GLY 129 1 Y 1 A GLY 130 A GLY 130 1 Y 1 A SER 131 A SER 131 1 Y 1 A ALA 244 A ALA 244 1 Y 1 A SER 245 A SER 245 1 Y 1 A GLY 246 A GLY 246 1 Y 1 A ALA 247 A ALA 247 1 Y 1 A HIS 248 A HIS 248 1 Y 1 A HIS 249 A HIS 249 1 Y 1 A HIS 250 A HIS 250 1 Y 1 A HIS 251 A HIS 251 1 Y 1 A HIS 252 A HIS 252 1 Y 1 B ASP 1 B ASP 1 1 Y 1 B TYR 2 B TYR 2 1 Y 1 B LYS 3 B LYS 3 1 Y 1 B GLY 113 B GLY 113 1 Y 1 B GLY 114 B GLY 114 1 Y 1 B GLY 115 B GLY 115 1 Y 1 B SER 116 B SER 116 1 Y 1 B GLY 117 B GLY 117 1 Y 1 B GLY 118 B GLY 118 1 Y 1 B GLY 119 B GLY 119 1 Y 1 B GLY 120 B GLY 120 1 Y 1 B SER 121 B SER 121 1 Y 1 B GLY 122 B GLY 122 1 Y 1 B GLY 123 B GLY 123 1 Y 1 B GLY 124 B GLY 124 1 Y 1 B GLY 125 B GLY 125 1 Y 1 B SER 126 B SER 126 1 Y 1 B GLY 127 B GLY 127 1 Y 1 B GLY 128 B GLY 128 1 Y 1 B GLY 129 B GLY 129 1 Y 1 B GLY 130 B GLY 130 1 Y 1 B SER 131 B SER 131 1 Y 1 B GLN 132 B GLN 132 1 Y 1 B ALA 244 B ALA 244 1 Y 1 B SER 245 B SER 245 1 Y 1 B GLY 246 B GLY 246 1 Y 1 B ALA 247 B ALA 247 1 Y 1 B HIS 248 B HIS 248 1 Y 1 B HIS 249 B HIS 249 1 Y 1 B HIS 250 B HIS 250 1 Y 1 B HIS 251 B HIS 251 1 Y 1 B HIS 252 B HIS 252 1 Y 1 B ALA 87 12.45 1 7.06 1.10 114.20 121.26 A A A CA CB SG CYS CYS CYS 26 26 26 N 1 -20.17 2.20 117.20 97.03 B B B CA C N ALA ALA ASP 87 87 88 Y 1 11.22 1.60 122.70 133.92 B B B O C N ALA ALA ASP 87 87 88 Y 1 B B C N ALA ASP 87 88 0.244 0.023 1.336 1.580 Y 1 A SER 10 -27.98 -70.26 1 A ALA 54 63.92 -31.55 1 A ARG 64 -28.85 -33.85 1 A SER 79 -53.76 -74.19 1 A ASN 80 -107.53 78.17 1 A GLU 84 -59.66 -3.05 1 A ALA 87 -177.28 -171.50 1 A LYS 110 -152.82 -47.52 1 A ALA 223 175.34 -179.37 1 A TRP 230 -46.04 109.56 1 B ALA 54 45.66 -51.31 1 B PRO 62 -48.51 156.70 1 B THR 72 -140.63 -25.22 1 B ASN 80 44.07 71.01 1 B ALA 223 -176.20 -177.71 PROTEIN_REP.PARAM PROTEIN.TOP 0.258 0.008 0.178 0.178 2.75 11.94 1070 13604 7.9 97.5 RANDOM 1342809.82 1 THROUGHOUT 0.0 MOLECULAR REPLACEMENT FLAT MODEL 31.0488 0.31283 0.27 2.75 11.94 110 3520 10 0 3400 0.011 1.6 26.7 0.96 0.404 0.031 0.314 2.92 175 2014 6 8.0 95.6 2.750 12.000 1H8O 14189 0.11000 1 8.0000 3.500 98.8 2.75 2.80 2.000 0.40000 1 3.00 90.7 refinement CNS 1.0 data reduction DENZO data scaling SCALEPACK phasing AMoRE MUTANT AL2 6E7P9G Three-dimensional structure of anti-ampicillin single chain Fv fragment. 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N A GLN 82 A GLN 82 HELX_P A LEU 86 A LEU 86 5 1 5 A THR 159 A THR 159 HELX_P A TYR 163 A TYR 163 5 2 5 A GLN 193 A GLN 193 HELX_P A LYS 196 A LYS 196 5 3 4 A THR 218 A THR 218 HELX_P A SER 222 A SER 222 5 4 5 B GLN 82 B GLN 82 HELX_P B LEU 86 B LEU 86 5 5 5 B THR 159 B THR 159 HELX_P B TYR 163 B TYR 163 5 6 5 B GLN 193 B GLN 193 HELX_P B LYS 196 B LYS 196 5 7 4 B LYS 205 B LYS 205 HELX_P B SER 207 B SER 207 5 8 3 B THR 218 B THR 218 HELX_P B SER 222 B SER 222 5 9 5 disulf 2.013 A CYS 26 A SG CYS 26 1_555 A CYS 91 A SG CYS 91 1_555 disulf 2.019 A CYS 153 A SG CYS 153 1_555 A CYS 227 A SG CYS 227 1_555 disulf 2.020 B CYS 26 B SG CYS 26 1_555 B CYS 91 B SG CYS 91 1_555 disulf 2.030 B CYS 153 B SG CYS 153 1_555 B CYS 227 B SG CYS 227 1_555 ANTIBODY ANTIBODY, FV FRAGMENT, ANTI-AMPICILLIN A TYR 97 A TYR 97 1 A PRO 98 A PRO 98 0.00 A GLU 137 A GLU 137 1 A PRO 138 A PRO 138 -0.52 B TYR 97 B TYR 97 1 B PRO 98 B PRO 98 -0.42 B GLU 137 B GLU 137 1 B PRO 138 B PRO 138 0.46 1H8O PDB 1 1H8O 1 252 1H8O 1 252 1H8O A 1 1 252 1 252 1H8O 1 252 1H8O B 1 1 252 4 6 4 6 4 3 4 6 4 6 4 3 anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel A LEU 7 A LEU 7 A GLN 9 A GLN 9 A VAL 22 A VAL 22 A ALA 28 A ALA 28 A ASP 73 A ASP 73 A ILE 78 A ILE 78 A PHE 65 A PHE 65 A SER 70 A SER 70 A PHE 13 A PHE 13 A THR 16 A THR 16 A THR 105 A THR 105 A LEU 109 A LEU 109 A ASP 88 A ASP 88 A GLN 93 A GLN 93 A VAL 36 A VAL 36 A GLN 41 A GLN 41 A LYS 48 A LYS 48 A TYR 52 A TYR 52 A THR 56 A THR 56 A ARG 57 A ARG 57 A PHE 13 A PHE 13 A THR 16 A THR 16 A THR 105 A THR 105 A LEU 109 A LEU 109 A ASP 88 A ASP 88 A GLN 93 A GLN 93 A THR 100 A THR 100 A PHE 101 A PHE 101 A GLY 140 A GLY 140 A VAL 143 A VAL 143 A THR 237 A THR 237 A VAL 241 A VAL 241 A ALA 223 A ALA 223 A ARG 229 A ARG 229 A ILE 165 A ILE 165 A GLN 170 A GLN 170 A LEU 176 A LEU 176 A ILE 182 A ILE 182 A THR 189 A THR 189 A TYR 191 A TYR 191 A GLY 140 A GLY 140 A VAL 143 A VAL 143 A THR 237 A THR 237 A VAL 241 A VAL 241 A ALA 223 A ALA 223 A ARG 229 A ARG 229 A TYR 232 A TYR 232 A TRP 233 A TRP 233 A VAL 149 A VAL 149 A LYS 154 A LYS 154 A THR 209 A THR 209 A LEU 214 A LEU 214 A LEU 201 A LEU 201 A ASP 204 A ASP 204 B LEU 7 B LEU 7 B GLN 9 B GLN 9 B VAL 22 B VAL 22 B ALA 28 B ALA 28 B ASP 73 B ASP 73 B ILE 78 B ILE 78 B PHE 65 B PHE 65 B SER 70 B SER 70 B PHE 13 B PHE 13 B THR 16 B THR 16 B THR 105 B THR 105 B LEU 109 B LEU 109 B ASP 88 B ASP 88 B GLN 93 B GLN 93 B VAL 36 B VAL 36 B GLN 41 B GLN 41 B LYS 48 B LYS 48 B TYR 52 B TYR 52 B THR 56 B THR 56 B ARG 57 B ARG 57 B PHE 13 B PHE 13 B THR 16 B THR 16 B THR 105 B THR 105 B LEU 109 B LEU 109 B ASP 88 B ASP 88 B GLN 93 B GLN 93 B THR 100 B THR 100 B PHE 101 B PHE 101 B GLY 140 B GLY 140 B VAL 143 B VAL 143 B THR 237 B THR 237 B VAL 241 B VAL 241 B ALA 223 B ALA 223 B ARG 229 B ARG 229 B ILE 165 B ILE 165 B GLN 170 B GLN 170 B LEU 176 B LEU 176 B ILE 182 B ILE 182 B THR 189 B THR 189 B TYR 191 B TYR 191 B GLY 140 B GLY 140 B VAL 143 B VAL 143 B THR 237 B THR 237 B VAL 241 B VAL 241 B ALA 223 B ALA 223 B ARG 229 B ARG 229 B TYR 232 B TYR 232 B TRP 233 B TRP 233 B VAL 149 B VAL 149 B LYS 154 B LYS 154 B THR 209 B THR 209 B LEU 214 B LEU 214 B ALA 199 B ALA 199 B ASP 204 B ASP 204 BINDING SITE FOR RESIDUE SO4 A1000 Software 4 BINDING SITE FOR RESIDUE SO4 A1001 Software 2 A HIS 11 A HIS 11 4 1_555 A LYS 12 A LYS 12 4 1_555 A PHE 13 A PHE 13 4 1_555 B ARG 111 B ARG 111 4 1_555 A LYS 12 A LYS 12 2 1_555 B ARG 111 B ARG 111 2 1_555 19 P 21 21 21