0.019730 0.011391 0.000000 0.000000 0.022782 0.000000 0.000000 0.000000 0.012640 0.00000 0.00000 0.00000 Delarbre, L. Stevenson, C.E.M. White, D.J. Mitchenall, L.A. Pau, R.N. Lawson, D.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 50.685 50.685 79.112 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mo O4 -2 159.938 MOLYBDATE ION MOLYBDATE non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking O4 P -3 94.971 PHOSPHATE ION non-polymer C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 308 1063 10.1006/JMBI.2001.4636 11352591 Two Crystal Structures of the Cytoplasmic Molybdate-Binding Protein Modg Suggest a Novel Cooperative Binding Mechanism and Provide Insights Into Ligand-Binding Specificity 2001 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.0 1 CCD 1998-04-15 MARRESEARCH SINGLE WAVELENGTH M x-ray 1 0.947 1.0 ID14-3 ESRF 0.947 SYNCHROTRON ESRF BEAMLINE ID14-3 14654.964 MOLYBDENUM-BINDING-PROTEIN 1 man polymer 159.938 MOLYBDATE ION 2 syn non-polymer 94.971 PHOSPHATE ION 2 syn non-polymer 18.015 water 77 nat water MODG no no GSHMKISARNVFKGTVSALKEGAVNAEVDILLGGGDKLAAVVTLESARSLQLAAGKEVVAVVKAPWVLLMTDSSGYRLSA RNILTGTVKTIETGAVNAEVTLALQGGTEITSMVTKEAVAELGLKPGASASAVIKASNVILGVPA GSHMKISARNVFKGTVSALKEGAVNAEVDILLGGGDKLAAVVTLESARSLQLAAGKEVVAVVKAPWVLLMTDSSGYRLSA RNILTGTVKTIETGAVNAEVTLALQGGTEITSMVTKEAVAELGLKPGASASAVIKASNVILGVPA A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n E162 sample CYTOPLASM MODG 354 AZOTOBACTER VINELANDII MODG 511693 ESCHERICHIA COLI BL21 PDJW373 PLASMID 1 1.34 40 VAPOR DIFFUSION 8.50 VAPOUR DIFFUSION. 75% SATURATED KH2PO4 IN 100MM TRIS-HCL PH8.5 WITH 2MM NA2MOO4., pH 8.50 exptl_crystal_grow pdbx_database_proc pdbx_database_status repository Initial release Version format compliance Version format compliance Data collection Experimental preparation Other 1 0 2001-05-11 1 1 2011-05-07 1 2 2011-07-13 1 3 2019-03-06 _exptl_crystal_grow.method _pdbx_database_status.recvd_author_approval AZOTOBACTER VINELANDII PERIPLASMIC MOLYBDATE- BINDING PROTEIN TWO CRYSTAL STRUCTURES OF THE CYTOPLASMIC MOLYBDATE-BINDING PROTEIN MODG SUGGEST A NOVEL COOPERATIVE BINDING MECHANISM AND PROVIDE INSIGHTS INTO LIGAND-BINDING SPECIFICITY. PHOSPHATE-GROWN FORM WITH TUNGSTATE AND PHOSPHATE BOUND TWO CRYSTAL STRUCTURES OF THE CYTOPLASMIC MOLYBDATE-BINDING PROTEIN MODG SUGGEST A NOVEL COOPERATIVE BINDING MECHANISM AND PROVIDE INSIGHTS INTO LIGAND-BINDING SPECIFICITY. PEG-GROWN FORM WITH MOLYBDATE BOUND PDBE Y PDBE 2001-03-13 REL MOO MOLYBDATE ION PO4 PHOSPHATE ION HOH water MOO 1143 2 MOO MOO 1143 A MOO 1144 2 MOO MOO 1144 A PO4 1145 3 PO4 PO4 1145 A PO4 1146 3 PO4 PO4 1146 A HOH 2001 4 HOH HOH 2001 A HOH 2002 4 HOH HOH 2002 A HOH 2003 4 HOH HOH 2003 A HOH 2004 4 HOH HOH 2004 A HOH 2005 4 HOH HOH 2005 A HOH 2006 4 HOH HOH 2006 A HOH 2007 4 HOH HOH 2007 A HOH 2008 4 HOH HOH 2008 A HOH 2009 4 HOH HOH 2009 A HOH 2010 4 HOH HOH 2010 A HOH 2011 4 HOH HOH 2011 A HOH 2012 4 HOH HOH 2012 A HOH 2013 4 HOH HOH 2013 A HOH 2014 4 HOH HOH 2014 A HOH 2015 4 HOH HOH 2015 A HOH 2016 4 HOH HOH 2016 A HOH 2017 4 HOH HOH 2017 A HOH 2018 4 HOH HOH 2018 A HOH 2019 4 HOH HOH 2019 A HOH 2020 4 HOH HOH 2020 A HOH 2021 4 HOH HOH 2021 A HOH 2022 4 HOH HOH 2022 A HOH 2023 4 HOH HOH 2023 A HOH 2024 4 HOH HOH 2024 A HOH 2025 4 HOH HOH 2025 A HOH 2026 4 HOH HOH 2026 A HOH 2027 4 HOH HOH 2027 A HOH 2028 4 HOH HOH 2028 A HOH 2029 4 HOH HOH 2029 A HOH 2030 4 HOH HOH 2030 A HOH 2031 4 HOH HOH 2031 A HOH 2032 4 HOH HOH 2032 A HOH 2033 4 HOH HOH 2033 A HOH 2034 4 HOH HOH 2034 A HOH 2035 4 HOH HOH 2035 A HOH 2036 4 HOH HOH 2036 A HOH 2037 4 HOH HOH 2037 A HOH 2038 4 HOH HOH 2038 A HOH 2039 4 HOH HOH 2039 A HOH 2040 4 HOH HOH 2040 A HOH 2041 4 HOH HOH 2041 A HOH 2042 4 HOH HOH 2042 A HOH 2043 4 HOH HOH 2043 A HOH 2044 4 HOH HOH 2044 A HOH 2045 4 HOH HOH 2045 A HOH 2046 4 HOH HOH 2046 A HOH 2047 4 HOH HOH 2047 A HOH 2048 4 HOH HOH 2048 A HOH 2049 4 HOH HOH 2049 A HOH 2050 4 HOH HOH 2050 A HOH 2051 4 HOH HOH 2051 A HOH 2052 4 HOH HOH 2052 A HOH 2053 4 HOH HOH 2053 A HOH 2054 4 HOH HOH 2054 A HOH 2055 4 HOH HOH 2055 A HOH 2056 4 HOH HOH 2056 A HOH 2057 4 HOH HOH 2057 A HOH 2058 4 HOH HOH 2058 A HOH 2059 4 HOH HOH 2059 A HOH 2060 4 HOH HOH 2060 A HOH 2061 4 HOH HOH 2061 A HOH 2062 4 HOH HOH 2062 A HOH 2063 4 HOH HOH 2063 A HOH 2064 4 HOH HOH 2064 A HOH 2065 4 HOH HOH 2065 A HOH 2066 4 HOH HOH 2066 A HOH 2067 4 HOH HOH 2067 A HOH 2068 4 HOH HOH 2068 A HOH 2069 4 HOH HOH 2069 A HOH 2070 4 HOH HOH 2070 A HOH 2071 4 HOH HOH 2071 A HOH 2072 4 HOH HOH 2072 A HOH 2073 4 HOH HOH 2073 A HOH 2074 4 HOH HOH 2074 A HOH 2075 4 HOH HOH 2075 A HOH 2076 4 HOH HOH 2076 A HOH 2077 4 HOH HOH 2077 A GLY -3 n 1 GLY -3 A SER -2 n 2 SER -2 A HIS -1 n 3 HIS -1 A MET 1 n 4 MET 1 A LYS 2 n 5 LYS 2 A ILE 3 n 6 ILE 3 A SER 4 n 7 SER 4 A ALA 5 n 8 ALA 5 A ARG 6 n 9 ARG 6 A ASN 7 n 10 ASN 7 A VAL 8 n 11 VAL 8 A PHE 9 n 12 PHE 9 A LYS 10 n 13 LYS 10 A GLY 11 n 14 GLY 11 A THR 12 n 15 THR 12 A VAL 13 n 16 VAL 13 A SER 14 n 17 SER 14 A ALA 15 n 18 ALA 15 A LEU 16 n 19 LEU 16 A LYS 17 n 20 LYS 17 A GLU 18 n 21 GLU 18 A GLY 19 n 22 GLY 19 A ALA 20 n 23 ALA 20 A VAL 21 n 24 VAL 21 A ASN 22 n 25 ASN 22 A ALA 23 n 26 ALA 23 A GLU 24 n 27 GLU 24 A VAL 25 n 28 VAL 25 A ASP 26 n 29 ASP 26 A ILE 27 n 30 ILE 27 A LEU 28 n 31 LEU 28 A LEU 29 n 32 LEU 29 A GLY 30 n 33 GLY 30 A GLY 31 n 34 GLY 31 A GLY 32 n 35 GLY 32 A ASP 33 n 36 ASP 33 A LYS 34 n 37 LYS 34 A LEU 35 n 38 LEU 35 A ALA 36 n 39 ALA 36 A ALA 37 n 40 ALA 37 A VAL 38 n 41 VAL 38 A VAL 39 n 42 VAL 39 A THR 40 n 43 THR 40 A LEU 41 n 44 LEU 41 A GLU 42 n 45 GLU 42 A SER 43 n 46 SER 43 A ALA 44 n 47 ALA 44 A ARG 45 n 48 ARG 45 A SER 46 n 49 SER 46 A LEU 47 n 50 LEU 47 A GLN 48 n 51 GLN 48 A LEU 49 n 52 LEU 49 A ALA 50 n 53 ALA 50 A ALA 51 n 54 ALA 51 A GLY 52 n 55 GLY 52 A LYS 53 n 56 LYS 53 A GLU 54 n 57 GLU 54 A VAL 55 n 58 VAL 55 A VAL 56 n 59 VAL 56 A ALA 57 n 60 ALA 57 A VAL 58 n 61 VAL 58 A VAL 59 n 62 VAL 59 A LYS 60 n 63 LYS 60 A ALA 61 n 64 ALA 61 A PRO 62 n 65 PRO 62 A TRP 63 n 66 TRP 63 A VAL 64 n 67 VAL 64 A LEU 65 n 68 LEU 65 A LEU 66 n 69 LEU 66 A MET 67 n 70 MET 67 A THR 68 n 71 THR 68 A ASP 69 n 72 ASP 69 A SER 70 n 73 SER 70 A SER 71 n 74 SER 71 A GLY 72 n 75 GLY 72 A TYR 73 n 76 TYR 73 A ARG 74 n 77 ARG 74 A LEU 75 n 78 LEU 75 A SER 76 n 79 SER 76 A ALA 77 n 80 ALA 77 A ARG 78 n 81 ARG 78 A ASN 79 n 82 ASN 79 A ILE 80 n 83 ILE 80 A LEU 81 n 84 LEU 81 A THR 82 n 85 THR 82 A GLY 83 n 86 GLY 83 A THR 84 n 87 THR 84 A VAL 85 n 88 VAL 85 A LYS 86 n 89 LYS 86 A THR 87 n 90 THR 87 A ILE 88 n 91 ILE 88 A GLU 89 n 92 GLU 89 A THR 90 n 93 THR 90 A GLY 91 n 94 GLY 91 A ALA 92 n 95 ALA 92 A VAL 93 n 96 VAL 93 A ASN 94 n 97 ASN 94 A ALA 95 n 98 ALA 95 A GLU 96 n 99 GLU 96 A VAL 97 n 100 VAL 97 A THR 98 n 101 THR 98 A LEU 99 n 102 LEU 99 A ALA 100 n 103 ALA 100 A LEU 101 n 104 LEU 101 A GLN 102 n 105 GLN 102 A GLY 103 n 106 GLY 103 A GLY 104 n 107 GLY 104 A THR 105 n 108 THR 105 A GLU 106 n 109 GLU 106 A ILE 107 n 110 ILE 107 A THR 108 n 111 THR 108 A SER 109 n 112 SER 109 A MET 110 n 113 MET 110 A VAL 111 n 114 VAL 111 A THR 112 n 115 THR 112 A LYS 113 n 116 LYS 113 A GLU 114 n 117 GLU 114 A ALA 115 n 118 ALA 115 A VAL 116 n 119 VAL 116 A ALA 117 n 120 ALA 117 A GLU 118 n 121 GLU 118 A LEU 119 n 122 LEU 119 A GLY 120 n 123 GLY 120 A LEU 121 n 124 LEU 121 A LYS 122 n 125 LYS 122 A PRO 123 n 126 PRO 123 A GLY 124 n 127 GLY 124 A ALA 125 n 128 ALA 125 A SER 126 n 129 SER 126 A ALA 127 n 130 ALA 127 A SER 128 n 131 SER 128 A ALA 129 n 132 ALA 129 A VAL 130 n 133 VAL 130 A ILE 131 n 134 ILE 131 A LYS 132 n 135 LYS 132 A ALA 133 n 136 ALA 133 A SER 134 n 137 SER 134 A ASN 135 n 138 ASN 135 A VAL 136 n 139 VAL 136 A ILE 137 n 140 ILE 137 A LEU 138 n 141 LEU 138 A GLY 139 n 142 GLY 139 A VAL 140 n 143 VAL 140 A PRO 141 n 144 PRO 141 A ALA 142 n 145 ALA 142 A author_and_software_defined_assembly PQS 3 trimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 -0.8660254038 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_655 -y+1,x-y,z crystal symmetry operation 50.6850000000 0.0000000000 0.0000000000 -0.5000000000 0.8660254038 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 3_665 -x+y+1,-x+1,z crystal symmetry operation 25.3425000000 43.8944975908 0.0000000000 A N VAL 39 A N VAL 42 A O ALA 23 A O ALA 26 A N LEU 28 A N LEU 31 A O THR 12 A O THR 15 A N GLY 11 A N GLY 14 A O VAL 55 A O VAL 58 A N VAL 58 A N VAL 61 A O ILE 137 A O ILE 140 A N MET 67 A N MET 70 A O SER 128 A O SER 131 A N ILE 131 A N ILE 134 A O ASN 79 A O ASN 82 A N GLU 89 A N GLU 92 A O GLU 96 A O GLU 99 A N LEU 99 A N LEU 102 A O ILE 107 A O ILE 110 1 A MOO 1143 B MOO 1 A MOO 1143 B MOO 1 A CG LYS 10 A CG LYS 13 1 Y 1 A CD LYS 10 A CD LYS 13 1 Y 1 A CE LYS 10 A CE LYS 13 1 Y 1 A NZ LYS 10 A NZ LYS 13 1 Y 1 A CG LYS 17 A CG LYS 20 1 Y 1 A CD LYS 17 A CD LYS 20 1 Y 1 A CE LYS 17 A CE LYS 20 1 Y 1 A NZ LYS 17 A NZ LYS 20 1 Y 1 A CG LYS 34 A CG LYS 37 1 Y 1 A CD LYS 34 A CD LYS 37 1 Y 1 A CE LYS 34 A CE LYS 37 1 Y 1 A NZ LYS 34 A NZ LYS 37 1 Y 1 A CG LYS 53 A CG LYS 56 1 Y 1 A CD LYS 53 A CD LYS 56 1 Y 1 A CE LYS 53 A CE LYS 56 1 Y 1 A NZ LYS 53 A NZ LYS 56 1 Y 1 A CG ARG 78 A CG ARG 81 1 Y 1 A CD ARG 78 A CD ARG 81 1 Y 1 A NE ARG 78 A NE ARG 81 1 Y 1 A CZ ARG 78 A CZ ARG 81 1 Y 1 A NH1 ARG 78 A NH1 ARG 81 1 Y 1 A NH2 ARG 78 A NH2 ARG 81 1 Y 1 A O3 MOO 1143 B O3 MOO 1 1 N 1 A O4 MOO 1143 B O4 MOO 1 1 N 1 A HIS -1 -24.17 1 A ASN 7 11.35 1 A THR 68 14.32 1 A THR 87 10.66 1 3.75 0.50 120.30 124.05 A A A NE CZ NH2 ARG ARG ARG 6 6 6 N 1 -20.33 2.30 110.00 89.67 A A A OG1 CB CG2 THR THR THR 12 12 12 C C N 1 -9.96 1.60 110.90 100.94 A A A CG1 CB CG2 VAL VAL VAL 93 93 93 N 1 -11.48 1.80 110.60 99.12 A A A N CA CB LYS LYS LYS 122 122 122 N 1 A A CB OG1 THR THR 12 12 -0.240 0.020 1.428 1.188 C N 1 A A CB CG2 THR THR 12 12 -0.288 0.033 1.519 1.231 C N 1 A A MO O2 MOO MOO 1143 1143 1.79 1_555 3_665 1 A LYS 122 -172.25 148.79 22 0.266 0.200 1.80 40.0 543 10144 5.0 98.7 RANDOM 1 THROUGHOUT 0.0 MAD 0.158 0.159 1.80 40.0 77 1099 18 0 1004 0.013 0.020 0.034 0.040 0.037 0.050 3.023 3.000 3.754 5.000 5.173 6.000 6.732 8.000 0.0225 0.03 0.128 0.150 0.175 0.300 0.257 0.300 0.163 0.300 3.8 7.0 12.8 15.0 44.8 20.0 19.3 1.800 44.000 1H9J 10144 -3.000 0.04500 1 8.6000 3.800 98.7 0.09200 1.80 1.90 5.100 1 3.00 98.1 refinement REFMAC data reduction DENZO data scaling SCALEPACK phasing MLPHARE MOLYBDENUM-BINDING-PROTEIN Two crystal structures of the cytoplasmic molybdate-binding protein ModG suggest a novel cooperative binding mechanism and provide insights into ligand-binding specificity. Phosphate-grown form with molybdate and phosphate bound 1 N N 2 N N 2 N N 3 N N 3 N N 4 N N A LEU 41 A LEU 44 HELX_P A LEU 47 A LEU 50 1 1 7 A LYS 60 A LYS 63 HELX_P A VAL 64 A VAL 67 5 2 5 A LYS 113 A LYS 116 HELX_P A GLY 120 A GLY 123 1 3 8 A LYS 132 A LYS 135 HELX_P A VAL 136 A VAL 139 5 4 5 BINDING PROTEIN BINDING PROTEIN, MOLYBDATE HOMEOSTASIS 1H9J PDB 1 1H9J Q44529 UNP 1 Q44529 -3 -1 1H9J -3 -1 1H9J A 1 1 3 1 142 1H9J 1 142 Q44529 A 2 4 145 5 5 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A LYS 34 A LYS 37 A THR 40 A THR 43 A ASN 22 A ASN 25 A LEU 29 A LEU 32 A ASN 7 A ASN 10 A GLU 18 A GLU 21 A GLU 54 A GLU 57 A VAL 59 A VAL 62 A ILE 137 A ILE 140 A GLY 139 A GLY 142 A LEU 65 A LEU 68 A MET 67 A MET 70 A SER 126 A SER 129 A ILE 131 A ILE 134 A ASN 79 A ASN 82 A THR 90 A THR 93 A ASN 94 A ASN 97 A LEU 101 A LEU 104 A GLU 106 A GLU 109 A THR 112 A THR 115 BINDING SITE FOR RESIDUE PO4 A1145 Software 11 BINDING SITE FOR RESIDUE PO4 A1146 Software 7 BINDING SITE FOR RESIDUE MOO A1143 Software 3 BINDING SITE FOR RESIDUE MOO A1144 Software 9 A SER 76 A SER 79 11 1_555 A ALA 77 A ALA 80 11 1_555 A ARG 78 A ARG 81 11 1_555 A LYS 132 A LYS 135 11 1_555 A ALA 133 A ALA 136 11 1_555 A SER 134 A SER 137 11 1_555 A PO4 1146 E PO4 11 1_555 A HOH 2036 F HOH 11 1_555 A HOH 2037 F HOH 11 1_555 A HOH 2076 F HOH 11 1_555 A HOH 2077 F HOH 11 1_555 A ASN 22 A ASN 25 7 1_555 A VAL 38 A VAL 41 7 1_555 A VAL 39 A VAL 42 7 1_555 A THR 40 A THR 43 7 1_555 A LYS 132 A LYS 135 7 1_555 A SER 134 A SER 137 7 1_555 A PO4 1145 D PO4 7 1_555 A ALA 92 A ALA 95 3 1_555 A VAL 93 A VAL 96 3 1_555 A ASN 94 A ASN 97 3 1_555 A SER 4 A SER 7 9 1_555 A ALA 5 A ALA 8 9 1_555 A ARG 6 A ARG 9 9 1_555 A LYS 60 A LYS 63 9 1_555 A ALA 61 A ALA 64 9 1_555 A PRO 62 A PRO 65 9 1_555 A THR 112 A THR 115 9 1_555 A ALA 115 A ALA 118 9 1_555 A HOH 2075 F HOH 9 1_555 150 P 3 2 1