0.010754
0.006209
0.000000
0.000000
0.012417
0.000000
0.000000
0.000000
0.002987
0.00000
0.00000
0.00000
Van Aalten, D.M.F.
Dirusso, C.C.
Knudsen, J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
24
90.00
90.00
120.00
92.992
92.992
334.826
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Au 1
196.967
GOLD ION
non-polymer
Cl -1
35.453
CHLORIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
AU
N
75
N
CL
N
76
N
N
N
77
R
C
N
78
N
C
N
79
N
O
N
80
N
C
N
81
N
S
N
82
N
O
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
O
N
91
N
P
N
92
N
O
N
93
N
O
N
94
N
O
N
95
N
C
N
96
R
C
N
97
N
O
N
98
S
C
N
99
N
O
N
100
N
C
N
101
R
C
Y
102
N
N
Y
103
N
C
Y
104
N
N
Y
105
N
C
Y
106
N
C
N
107
N
N
Y
108
N
N
Y
109
N
C
Y
110
N
N
Y
111
N
C
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
O
N
127
N
P
N
128
N
O
N
129
N
O
N
130
N
O
N
131
N
C
N
132
R
C
N
133
N
O
N
134
S
C
N
135
N
O
N
136
N
C
N
137
R
C
N
138
N
N
N
139
N
C
N
140
N
O
N
141
N
N
N
142
N
C
N
143
N
N
N
144
N
C
N
145
N
C
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
O
N
161
N
P
N
162
N
O
N
163
N
O
N
164
N
O
N
165
N
C
N
166
R
C
N
167
N
O
N
168
S
C
N
169
N
O
N
170
N
C
N
171
R
C
Y
172
N
N
Y
173
N
C
Y
174
N
N
Y
175
N
C
N
176
N
C
N
177
N
O
N
178
N
N
N
179
N
C
N
180
N
N
N
181
N
N
Y
182
N
C
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
O
N
198
N
P
N
199
N
O
N
200
N
O
N
201
N
O
N
202
N
C
N
203
R
C
N
204
N
O
N
205
S
C
N
206
N
O
N
207
N
C
N
208
R
C
N
209
N
N
N
210
N
C
N
211
N
O
N
212
N
N
N
213
N
C
N
214
N
O
N
215
N
C
N
216
N
C
N
217
N
C
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
N
N
234
S
C
N
235
N
C
N
236
N
O
N
237
N
C
N
238
N
C
N
239
N
C
N
240
N
O
N
241
N
N
N
242
N
O
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
N
N
254
S
C
N
255
N
C
N
256
N
O
N
257
N
C
N
258
N
C
N
259
N
C
N
260
N
O
N
261
N
O
N
262
N
O
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
N
N
273
N
C
N
274
N
C
N
275
N
O
N
276
N
O
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
N
N
283
S
C
N
284
N
C
N
285
N
O
N
286
N
C
Y
287
N
C
Y
288
N
N
Y
289
N
C
Y
290
N
C
Y
291
N
N
N
292
N
O
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
O
N
304
N
H
N
305
N
H
N
306
N
N
N
307
S
C
N
308
N
C
N
309
N
O
N
310
S
C
N
311
N
C
N
312
N
C
N
313
N
C
N
314
N
O
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
N
N
329
S
C
N
330
N
C
N
331
N
O
N
332
N
C
N
333
N
C
N
334
N
C
N
335
N
C
N
336
N
O
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
N
N
351
S
C
N
352
N
C
N
353
N
O
N
354
N
C
N
355
N
C
N
356
N
C
N
357
N
C
N
358
N
N
N
359
N
O
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
N
N
376
S
C
N
377
N
C
N
378
N
O
N
379
N
C
N
380
N
C
N
381
N
S
N
382
N
C
N
383
N
O
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
N
N
396
S
C
N
397
N
C
N
398
N
O
N
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
N
406
N
O
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
N
N
419
S
C
N
420
N
C
N
421
N
O
N
422
N
C
N
423
N
C
N
424
N
C
N
425
N
O
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
N
N
436
S
C
N
437
N
C
N
438
N
O
N
439
N
C
N
440
N
O
N
441
N
O
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
N
N
450
S
C
N
451
N
C
N
452
N
O
N
453
R
C
N
454
N
O
N
455
N
C
N
456
N
O
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
N
N
467
S
C
N
468
N
C
N
469
N
O
N
470
N
C
Y
471
N
C
Y
472
N
C
Y
473
N
C
Y
474
N
N
Y
475
N
C
Y
476
N
C
Y
477
N
C
Y
478
N
C
Y
479
N
C
N
480
N
O
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
N
N
494
S
C
N
495
N
C
N
496
N
O
N
497
N
C
Y
498
N
C
Y
499
N
C
Y
500
N
C
Y
501
N
C
Y
502
N
C
Y
503
N
C
N
504
N
O
N
505
N
O
N
506
N
H
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
H
N
515
N
H
N
516
N
H
N
517
N
N
N
518
S
C
N
519
N
C
N
520
N
O
N
521
N
C
N
522
N
C
N
523
N
C
N
524
N
O
N
525
N
H
N
526
N
H
N
527
N
H
N
528
N
H
N
529
N
H
N
530
N
H
N
531
N
H
N
532
N
H
N
533
N
H
N
534
N
H
N
535
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
doub
N
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
Y
179
N
sing
Y
180
N
sing
Y
181
N
doub
N
182
N
sing
Y
183
N
sing
N
184
N
sing
Y
185
N
doub
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
doub
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
doub
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
doub
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
Y
289
N
sing
Y
290
N
doub
Y
291
N
doub
N
292
N
sing
Y
293
N
sing
N
294
N
sing
Y
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
doub
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
doub
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
doub
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
Y
397
N
doub
Y
398
N
sing
Y
399
N
sing
N
400
N
sing
Y
401
N
doub
N
402
N
sing
Y
403
N
doub
N
404
N
sing
Y
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
doub
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
doub
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
doub
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
doub
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
Y
466
N
doub
Y
467
N
sing
Y
468
N
sing
N
469
N
sing
Y
470
N
doub
Y
471
N
sing
Y
472
N
sing
N
473
N
sing
Y
474
N
sing
Y
475
N
doub
N
476
N
sing
Y
477
N
doub
N
478
N
sing
Y
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
doub
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
Y
494
N
doub
Y
495
N
sing
Y
496
N
sing
N
497
N
sing
Y
498
N
doub
N
499
N
sing
Y
500
N
doub
N
501
N
sing
Y
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
sing
N
513
N
doub
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
UK
Embo J.
EMJODG
0897
0261-4189
20
2041
10.1093/EMBOJ/20.8.2041
11296236
The Structural Basis of Acyl Coenzyme A-Dependent Regulation of the Transcription Factor Fadr
2001
UK
Embo J.
EMJODG
0897
0261-4189
19
5167
10.1093/EMBOJ/19.19.5167
11013219
Crystal Structure of Fadr, a Fatty Acid-Responsive Transcription Factor with a Novel Acyl Coenzyme A-Binding Fold
2000
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
56
469
10.1107/S0907444900000937
10739923
Crystallization and X-Ray Diffraction Studies of the Fatty-Acid Responsive Transcription Factor Fadr from Escherichia Coli
2000
10.2210/pdb1h9t/pdb
pdb_00001h9t
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
CCD
2000-12-29
ADSC CCD
SINGLE WAVELENGTH
M
x-ray
1
1.02467
1.0
F2
CHESS
1.02467
SYNCHROTRON
CHESS BEAMLINE F2
27493.111
FATTY ACID METABOLISM REGULATOR PROTEIN
2
man
polymer
5789.762
5'-D(*CP*AP*TP*CP*TP*GP*GP*TP*AP*CP*GP*AP* CP*CP*AP*GP*AP*TP*C)-3'
1
syn
polymer
5860.796
5'-D(*GP*AP*TP*CP*TP*GP*GP*TP*CP*GP*TP*AP* CP*CP*AP*GP*AP*TP*G)-3'
1
syn
polymer
196.967
GOLD ION
2
syn
non-polymer
35.453
CHLORIDE ION
3
syn
non-polymer
18.015
water
25
nat
water
no
no
FADRMVIKAQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNNFWE
TSGLNILETLARLDHESVPQLIDNLLSVRTNISTIFIRTAFRQHPDKAQEVLATANEVADHADAFAELDYNIFRGLAFAS
GNPIYGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSALCSEGAHDQVYETVRRYGHESGEIWHRMQKNLPGDLAI
QGR
FADRMVIKAQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNNFWE
TSGLNILETLARLDHESVPQLIDNLLSVRTNISTIFIRTAFRQHPDKAQEVLATANEVADHADAFAELDYNIFRGLAFAS
GNPIYGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSALCSEGAHDQVYETVRRYGHESGEIWHRMQKNLPGDLAI
QGR
A,B
polypeptide(L)
no
no
(DC)(DA)(DT)(DC)(DT)(DG)(DG)(DT)(DA)(DC)(DG)(DA)(DC)(DC)(DA)(DG)(DA)(DT)(DC)
CATCTGGTACGACCAGATC
X
polydeoxyribonucleotide
no
no
(DG)(DA)(DT)(DC)(DT)(DG)(DG)(DT)(DC)(DG)(DT)(DA)(DC)(DC)(DA)(DG)(DA)(DT)(DG)
GATCTGGTCGTACCAGATG
Y
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
562
ESCHERICHIA COLI
562
ESCHERICHIA COLI
1
2.48
60.77
6.50
SODIUM CITRATE PH 6.5
-2.652
1
19
X
1
Y
19
1.262
X_DC1:DG19_Y
1
-8.126
-0.405
0.750
-0.083
1.212
1
20
X
2
Y
18
3.038
X_DA2:DT18_Y
2
-14.835
0.525
-0.230
-0.313
9.239
1
20
X
3
Y
17
4.994
X_DT3:DA17_Y
3
-15.600
0.478
0.063
-0.037
8.433
1
19
X
4
Y
16
-1.746
X_DC4:DG16_Y
4
-9.280
-0.134
-0.184
-0.038
3.913
1
20
X
5
Y
15
-0.330
X_DT5:DA15_Y
5
0.174
-0.619
-0.278
-0.296
-1.550
1
19
X
6
Y
14
1.393
X_DG6:DC14_Y
6
-0.961
-0.113
0.109
-0.109
-15.240
1
19
X
7
Y
13
3.041
X_DG7:DC13_Y
7
-5.957
-0.679
-0.236
-0.271
-4.269
1
20
X
8
Y
12
6.849
X_DT8:DA12_Y
8
5.047
-0.113
0.038
0.420
-12.348
1
20
X
9
Y
11
-2.418
X_DA9:DT11_Y
9
-11.575
-0.615
-0.378
-0.647
0.767
1
19
X
10
Y
10
4.413
X_DC10:DG10_Y
10
-3.161
-0.741
-0.608
-0.294
16.205
1
19
X
11
Y
9
4.253
X_DG11:DC9_Y
11
-6.494
0.871
0.065
-0.259
10.923
X
12
Y
8
7.993
X_DA12:DT8_Y
12
5.703
-0.012
0.202
0.522
15.721
1
19
X
13
Y
7
6.936
X_DC13:DG7_Y
13
-7.400
0.760
-0.084
-0.263
0.288
1
19
X
14
Y
6
-2.008
X_DC14:DG6_Y
14
-4.812
0.177
0.168
-0.109
-6.952
1
20
X
15
Y
5
-1.740
X_DA15:DT5_Y
15
-3.927
0.822
-0.662
-0.280
-10.835
1
19
X
16
Y
4
1.269
X_DG16:DC4_Y
16
-13.340
-0.191
-0.258
0.164
-10.254
1
20
X
17
Y
3
4.527
X_DA17:DT3_Y
17
-12.051
-0.426
-0.196
-0.140
-1.359
1
20
X
18
Y
2
4.467
X_DT18:DA2_Y
18
-16.125
-0.526
0.028
-0.282
1.063
1
19
X
19
Y
1
-1.813
X_DC19:DG1_Y
19
-11.701
-1.544
-0.328
-0.038
3.157
43.621
X
X
1
2
-1.755
Y
Y
19
18
3.341
-1.294
-0.454
0.595
XX_DC1DA2:DT18DG19_YY
1
9.462
-12.828
42.613
0.925
1.525
2.610
24.997
X
X
2
3
19.195
Y
Y
18
17
3.015
8.160
0.674
-0.695
XX_DA2DT3:DA17DT18_YY
2
-0.712
1.675
23.638
-3.755
-1.744
3.059
38.086
X
X
3
4
-6.457
Y
Y
17
16
3.039
-4.204
-0.322
-0.233
XX_DT3DC4:DG16DA17_YY
3
-1.850
2.841
37.818
0.141
0.274
3.121
34.221
X
X
4
5
17.080
Y
Y
16
15
3.314
9.825
1.027
-0.729
XX_DC4DT5:DA15DG16_YY
4
7.988
-13.887
31.858
-2.821
-0.459
3.121
36.069
X
X
5
6
11.641
Y
Y
15
14
3.360
7.159
0.196
-0.825
XX_DT5DG6:DC14DA15_YY
5
-2.284
3.714
35.303
-2.348
-0.640
3.677
37.114
X
X
6
7
-2.935
Y
Y
14
13
3.622
-1.866
0.082
-1.225
XX_DG6DG7:DC13DC14_YY
6
2.017
-3.172
37.015
-1.646
0.172
3.159
31.670
X
X
7
8
-5.071
Y
Y
13
12
3.051
-2.763
-0.156
-1.351
XX_DG7DT8:DA12DC13_YY
7
-1.881
3.453
31.498
-1.990
-0.045
3.274
32.733
X
X
8
9
11.068
Y
Y
12
11
3.421
6.198
-0.353
-0.335
XX_DT8DA9:DT11DA12_YY
8
1.945
-3.474
32.099
-1.701
0.973
3.159
26.858
X
X
9
10
-0.548
Y
Y
11
10
3.166
-0.253
0.231
0.065
XX_DA9DC10:DG10DT11_YY
9
4.614
-9.982
26.464
0.203
0.659
3.139
38.922
X
X
10
11
17.127
Y
Y
10
9
3.140
11.239
0.274
0.617
XX_DC10DG11:DC9DG10_YY
10
-4.320
6.584
37.081
-0.417
-0.928
3.286
29.843
X
X
11
12
6.212
Y
Y
9
8
3.379
3.191
-0.233
-0.790
XX_DG11DA12:DT8DC9_YY
11
-2.127
4.141
29.601
-2.212
0.000
3.398
32.046
X
X
12
13
-4.386
Y
Y
8
7
3.296
-2.415
0.308
-1.327
XX_DA12DC13:DG7DT8_YY
12
3.315
-6.020
31.789
-1.956
0.055
3.591
37.910
X
X
13
14
-1.266
Y
Y
7
6
3.539
-0.822
-0.546
-1.127
XX_DC13DC14:DG6DG7_YY
13
-2.667
4.108
37.811
-1.620
0.468
3.304
36.394
X
X
14
15
10.737
Y
Y
6
5
3.564
6.654
-0.205
-0.859
XX_DC14DA15:DT5DG6_YY
14
4.542
-7.329
35.521
-2.360
1.000
3.067
32.618
X
X
15
16
19.162
Y
Y
5
4
3.310
10.413
-0.864
-0.569
XX_DA15DG16:DC4DT5_YY
15
-9.842
18.111
29.379
-2.876
-0.222
3.061
39.815
X
X
16
17
-4.973
Y
Y
4
3
3.050
-3.383
0.177
-0.226
XX_DG16DA17:DT3DC4_YY
16
0.894
-1.314
39.667
0.035
-0.162
2.673
24.747
X
X
17
18
18.626
Y
Y
3
2
2.995
7.844
-0.561
-0.637
XX_DA17DT18:DA2DT3_YY
17
-1.471
3.492
23.444
-3.608
0.912
3.318
31.221
X
X
18
19
16.777
Y
Y
2
1
3.295
8.908
-0.003
0.559
XX_DT18DC19:DG1DA2_YY
18
-1.102
2.076
29.934
-0.709
-0.211
atom_site
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Atomic model
Data collection
Database references
Other
Refinement description
1
0
2001-04-04
1
1
2011-05-07
1
2
2011-07-13
2
0
2023-12-13
_atom_site.occupancy
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
FADR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM E. COLI
FADR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM E. COLI, IN COMPLEX WITH MYRISTOYL-COA
THE FADR-DNA COMPLEX: TRANSCRIPTIONAL CONTROL OF FATTY ACIDMETABOLISM IN ESCHERICHIA COLI
FADR-DNA COMPLEX: TRANSCRIPTIONAL CONTROL OF FATTY ACIDMETABOLISM IN ECHERICHIA COLI
PDBE
Y
PDBE
2001-03-19
REL
REL
1
A
O
HOH
2001
5.93
AU
GOLD ION
CL
CHLORIDE ION
HOH
water
1E2X
PDB
experimental model
AU
1240
4
AU
AU
1240
A
CL
1241
5
CL
CL
1241
A
CL
1242
5
CL
CL
1242
A
AU
1231
4
AU
AU
1231
B
CL
1232
5
CL
CL
1232
B
HOH
2001
6
HOH
HOH
2001
A
HOH
2002
6
HOH
HOH
2002
A
HOH
2003
6
HOH
HOH
2003
A
HOH
2004
6
HOH
HOH
2004
A
HOH
2005
6
HOH
HOH
2005
A
HOH
2006
6
HOH
HOH
2006
A
HOH
2007
6
HOH
HOH
2007
A
HOH
2008
6
HOH
HOH
2008
A
HOH
2009
6
HOH
HOH
2009
A
HOH
2010
6
HOH
HOH
2010
A
HOH
2011
6
HOH
HOH
2011
A
HOH
2012
6
HOH
HOH
2012
A
HOH
2013
6
HOH
HOH
2013
A
HOH
2001
6
HOH
HOH
2001
B
HOH
2002
6
HOH
HOH
2002
B
HOH
2003
6
HOH
HOH
2003
B
HOH
2004
6
HOH
HOH
2004
B
HOH
2005
6
HOH
HOH
2005
B
HOH
2006
6
HOH
HOH
2006
B
HOH
2007
6
HOH
HOH
2007
B
HOH
2008
6
HOH
HOH
2008
B
HOH
2009
6
HOH
HOH
2009
B
HOH
2010
6
HOH
HOH
2010
B
HOH
2001
6
HOH
HOH
2001
Y
HOH
2002
6
HOH
HOH
2002
Y
n
1
-3
A
n
2
-2
A
n
3
-1
A
n
4
0
A
n
5
1
A
n
6
2
A
n
7
3
A
n
8
4
A
ALA
5
n
9
ALA
5
A
GLN
6
n
10
GLN
6
A
SER
7
n
11
SER
7
A
PRO
8
n
12
PRO
8
A
ALA
9
n
13
ALA
9
A
GLY
10
n
14
GLY
10
A
PHE
11
n
15
PHE
11
A
ALA
12
n
16
ALA
12
A
GLU
13
n
17
GLU
13
A
GLU
14
n
18
GLU
14
A
TYR
15
n
19
TYR
15
A
ILE
16
n
20
ILE
16
A
ILE
17
n
21
ILE
17
A
GLU
18
n
22
GLU
18
A
SER
19
n
23
SER
19
A
ILE
20
n
24
ILE
20
A
TRP
21
n
25
TRP
21
A
ASN
22
n
26
ASN
22
A
ASN
23
n
27
ASN
23
A
ARG
24
n
28
ARG
24
A
PHE
25
n
29
PHE
25
A
PRO
26
n
30
PRO
26
A
PRO
27
n
31
PRO
27
A
GLY
28
n
32
GLY
28
A
THR
29
n
33
THR
29
A
ILE
30
n
34
ILE
30
A
LEU
31
n
35
LEU
31
A
PRO
32
n
36
PRO
32
A
ALA
33
n
37
ALA
33
A
GLU
34
n
38
GLU
34
A
ARG
35
n
39
ARG
35
A
GLU
36
n
40
GLU
36
A
LEU
37
n
41
LEU
37
A
SER
38
n
42
SER
38
A
GLU
39
n
43
GLU
39
A
LEU
40
n
44
LEU
40
A
ILE
41
n
45
ILE
41
A
GLY
42
n
46
GLY
42
A
VAL
43
n
47
VAL
43
A
THR
44
n
48
THR
44
A
ARG
45
n
49
ARG
45
A
THR
46
n
50
THR
46
A
THR
47
n
51
THR
47
A
LEU
48
n
52
LEU
48
A
ARG
49
n
53
ARG
49
A
GLU
50
n
54
GLU
50
A
VAL
51
n
55
VAL
51
A
LEU
52
n
56
LEU
52
A
GLN
53
n
57
GLN
53
A
ARG
54
n
58
ARG
54
A
LEU
55
n
59
LEU
55
A
ALA
56
n
60
ALA
56
A
ARG
57
n
61
ARG
57
A
ASP
58
n
62
ASP
58
A
GLY
59
n
63
GLY
59
A
TRP
60
n
64
TRP
60
A
LEU
61
n
65
LEU
61
A
THR
62
n
66
THR
62
A
ILE
63
n
67
ILE
63
A
GLN
64
n
68
GLN
64
A
HIS
65
n
69
HIS
65
A
GLY
66
n
70
GLY
66
A
LYS
67
n
71
LYS
67
A
PRO
68
n
72
PRO
68
A
THR
69
n
73
THR
69
A
LYS
70
n
74
LYS
70
A
VAL
71
n
75
VAL
71
A
ASN
72
n
76
ASN
72
A
ASN
73
n
77
ASN
73
A
PHE
74
n
78
PHE
74
A
TRP
75
n
79
TRP
75
A
GLU
76
n
80
GLU
76
A
THR
77
n
81
THR
77
A
SER
78
n
82
SER
78
A
GLY
79
n
83
GLY
79
A
LEU
80
n
84
LEU
80
A
ASN
81
n
85
ASN
81
A
ILE
82
n
86
ILE
82
A
LEU
83
n
87
LEU
83
A
GLU
84
n
88
GLU
84
A
THR
85
n
89
THR
85
A
LEU
86
n
90
LEU
86
A
ALA
87
n
91
ALA
87
A
ARG
88
n
92
ARG
88
A
LEU
89
n
93
LEU
89
A
ASP
90
n
94
ASP
90
A
HIS
91
n
95
HIS
91
A
GLU
92
n
96
GLU
92
A
SER
93
n
97
SER
93
A
VAL
94
n
98
VAL
94
A
PRO
95
n
99
PRO
95
A
GLN
96
n
100
GLN
96
A
LEU
97
n
101
LEU
97
A
ILE
98
n
102
ILE
98
A
ASP
99
n
103
ASP
99
A
ASN
100
n
104
ASN
100
A
LEU
101
n
105
LEU
101
A
LEU
102
n
106
LEU
102
A
SER
103
n
107
SER
103
A
VAL
104
n
108
VAL
104
A
ARG
105
n
109
ARG
105
A
THR
106
n
110
THR
106
A
ASN
107
n
111
ASN
107
A
ILE
108
n
112
ILE
108
A
SER
109
n
113
SER
109
A
THR
110
n
114
THR
110
A
ILE
111
n
115
ILE
111
A
PHE
112
n
116
PHE
112
A
ILE
113
n
117
ILE
113
A
ARG
114
n
118
ARG
114
A
THR
115
n
119
THR
115
A
ALA
116
n
120
ALA
116
A
PHE
117
n
121
PHE
117
A
ARG
118
n
122
ARG
118
A
GLN
119
n
123
GLN
119
A
HIS
120
n
124
HIS
120
A
PRO
121
n
125
PRO
121
A
ASP
122
n
126
ASP
122
A
LYS
123
n
127
LYS
123
A
ALA
124
n
128
ALA
124
A
GLN
125
n
129
GLN
125
A
GLU
126
n
130
GLU
126
A
VAL
127
n
131
VAL
127
A
LEU
128
n
132
LEU
128
A
ALA
129
n
133
ALA
129
A
THR
130
n
134
THR
130
A
ALA
131
n
135
ALA
131
A
ASN
132
n
136
ASN
132
A
GLU
133
n
137
GLU
133
A
VAL
134
n
138
VAL
134
A
ALA
135
n
139
ALA
135
A
ASP
136
n
140
ASP
136
A
HIS
137
n
141
HIS
137
A
ALA
138
n
142
ALA
138
A
ASP
139
n
143
ASP
139
A
ALA
140
n
144
ALA
140
A
PHE
141
n
145
PHE
141
A
ALA
142
n
146
ALA
142
A
GLU
143
n
147
GLU
143
A
LEU
144
n
148
LEU
144
A
ASP
145
n
149
ASP
145
A
TYR
146
n
150
TYR
146
A
ASN
147
n
151
ASN
147
A
ILE
148
n
152
ILE
148
A
PHE
149
n
153
PHE
149
A
ARG
150
n
154
ARG
150
A
GLY
151
n
155
GLY
151
A
LEU
152
n
156
LEU
152
A
ALA
153
n
157
ALA
153
A
PHE
154
n
158
PHE
154
A
ALA
155
n
159
ALA
155
A
SER
156
n
160
SER
156
A
GLY
157
n
161
GLY
157
A
ASN
158
n
162
ASN
158
A
PRO
159
n
163
PRO
159
A
ILE
160
n
164
ILE
160
A
TYR
161
n
165
TYR
161
A
GLY
162
n
166
GLY
162
A
LEU
163
n
167
LEU
163
A
ILE
164
n
168
ILE
164
A
LEU
165
n
169
LEU
165
A
ASN
166
n
170
ASN
166
A
GLY
167
n
171
GLY
167
A
MET
168
n
172
MET
168
A
LYS
169
n
173
LYS
169
A
GLY
170
n
174
GLY
170
A
LEU
171
n
175
LEU
171
A
TYR
172
n
176
TYR
172
A
THR
173
n
177
THR
173
A
ARG
174
n
178
ARG
174
A
ILE
175
n
179
ILE
175
A
GLY
176
n
180
GLY
176
A
ARG
177
n
181
ARG
177
A
HIS
178
n
182
HIS
178
A
TYR
179
n
183
TYR
179
A
PHE
180
n
184
PHE
180
A
ALA
181
n
185
ALA
181
A
ASN
182
n
186
ASN
182
A
PRO
183
n
187
PRO
183
A
GLU
184
n
188
GLU
184
A
ALA
185
n
189
ALA
185
A
ARG
186
n
190
ARG
186
A
SER
187
n
191
SER
187
A
LEU
188
n
192
LEU
188
A
ALA
189
n
193
ALA
189
A
LEU
190
n
194
LEU
190
A
GLY
191
n
195
GLY
191
A
PHE
192
n
196
PHE
192
A
TYR
193
n
197
TYR
193
A
HIS
194
n
198
HIS
194
A
LYS
195
n
199
LYS
195
A
LEU
196
n
200
LEU
196
A
SER
197
n
201
SER
197
A
ALA
198
n
202
ALA
198
A
LEU
199
n
203
LEU
199
A
CYS
200
n
204
CYS
200
A
SER
201
n
205
SER
201
A
GLU
202
n
206
GLU
202
A
GLY
203
n
207
GLY
203
A
ALA
204
n
208
ALA
204
A
HIS
205
n
209
HIS
205
A
ASP
206
n
210
ASP
206
A
GLN
207
n
211
GLN
207
A
VAL
208
n
212
VAL
208
A
TYR
209
n
213
TYR
209
A
GLU
210
n
214
GLU
210
A
THR
211
n
215
THR
211
A
VAL
212
n
216
VAL
212
A
ARG
213
n
217
ARG
213
A
ARG
214
n
218
ARG
214
A
TYR
215
n
219
TYR
215
A
GLY
216
n
220
GLY
216
A
HIS
217
n
221
HIS
217
A
GLU
218
n
222
GLU
218
A
SER
219
n
223
SER
219
A
GLY
220
n
224
GLY
220
A
GLU
221
n
225
GLU
221
A
ILE
222
n
226
ILE
222
A
TRP
223
n
227
TRP
223
A
HIS
224
n
228
HIS
224
A
ARG
225
n
229
ARG
225
A
MET
226
n
230
MET
226
A
GLN
227
n
231
GLN
227
A
LYS
228
n
232
LYS
228
A
ASN
229
n
233
ASN
229
A
LEU
230
n
234
LEU
230
A
n
235
231
A
n
236
232
A
n
237
233
A
LEU
234
n
238
LEU
234
A
ALA
235
n
239
ALA
235
A
ILE
236
n
240
ILE
236
A
GLN
237
n
241
GLN
237
A
GLY
238
n
242
GLY
238
A
ARG
239
n
243
ARG
239
A
n
1
-3
B
n
2
-2
B
n
3
-1
B
n
4
0
B
n
5
1
B
n
6
2
B
n
7
3
B
n
8
4
B
ALA
5
n
9
ALA
5
B
GLN
6
n
10
GLN
6
B
SER
7
n
11
SER
7
B
PRO
8
n
12
PRO
8
B
ALA
9
n
13
ALA
9
B
GLY
10
n
14
GLY
10
B
PHE
11
n
15
PHE
11
B
ALA
12
n
16
ALA
12
B
GLU
13
n
17
GLU
13
B
GLU
14
n
18
GLU
14
B
TYR
15
n
19
TYR
15
B
ILE
16
n
20
ILE
16
B
ILE
17
n
21
ILE
17
B
GLU
18
n
22
GLU
18
B
SER
19
n
23
SER
19
B
ILE
20
n
24
ILE
20
B
TRP
21
n
25
TRP
21
B
ASN
22
n
26
ASN
22
B
ASN
23
n
27
ASN
23
B
ARG
24
n
28
ARG
24
B
PHE
25
n
29
PHE
25
B
PRO
26
n
30
PRO
26
B
PRO
27
n
31
PRO
27
B
GLY
28
n
32
GLY
28
B
THR
29
n
33
THR
29
B
ILE
30
n
34
ILE
30
B
LEU
31
n
35
LEU
31
B
PRO
32
n
36
PRO
32
B
ALA
33
n
37
ALA
33
B
GLU
34
n
38
GLU
34
B
ARG
35
n
39
ARG
35
B
GLU
36
n
40
GLU
36
B
LEU
37
n
41
LEU
37
B
SER
38
n
42
SER
38
B
GLU
39
n
43
GLU
39
B
LEU
40
n
44
LEU
40
B
ILE
41
n
45
ILE
41
B
GLY
42
n
46
GLY
42
B
VAL
43
n
47
VAL
43
B
THR
44
n
48
THR
44
B
ARG
45
n
49
ARG
45
B
THR
46
n
50
THR
46
B
THR
47
n
51
THR
47
B
LEU
48
n
52
LEU
48
B
ARG
49
n
53
ARG
49
B
GLU
50
n
54
GLU
50
B
VAL
51
n
55
VAL
51
B
LEU
52
n
56
LEU
52
B
GLN
53
n
57
GLN
53
B
ARG
54
n
58
ARG
54
B
LEU
55
n
59
LEU
55
B
ALA
56
n
60
ALA
56
B
ARG
57
n
61
ARG
57
B
ASP
58
n
62
ASP
58
B
GLY
59
n
63
GLY
59
B
TRP
60
n
64
TRP
60
B
LEU
61
n
65
LEU
61
B
THR
62
n
66
THR
62
B
ILE
63
n
67
ILE
63
B
GLN
64
n
68
GLN
64
B
HIS
65
n
69
HIS
65
B
GLY
66
n
70
GLY
66
B
LYS
67
n
71
LYS
67
B
PRO
68
n
72
PRO
68
B
THR
69
n
73
THR
69
B
LYS
70
n
74
LYS
70
B
VAL
71
n
75
VAL
71
B
ASN
72
n
76
ASN
72
B
ASN
73
n
77
ASN
73
B
PHE
74
n
78
PHE
74
B
TRP
75
n
79
TRP
75
B
GLU
76
n
80
GLU
76
B
THR
77
n
81
THR
77
B
SER
78
n
82
SER
78
B
GLY
79
n
83
GLY
79
B
LEU
80
n
84
LEU
80
B
ASN
81
n
85
ASN
81
B
ILE
82
n
86
ILE
82
B
LEU
83
n
87
LEU
83
B
GLU
84
n
88
GLU
84
B
THR
85
n
89
THR
85
B
LEU
86
n
90
LEU
86
B
ALA
87
n
91
ALA
87
B
ARG
88
n
92
ARG
88
B
LEU
89
n
93
LEU
89
B
ASP
90
n
94
ASP
90
B
HIS
91
n
95
HIS
91
B
GLU
92
n
96
GLU
92
B
SER
93
n
97
SER
93
B
VAL
94
n
98
VAL
94
B
PRO
95
n
99
PRO
95
B
GLN
96
n
100
GLN
96
B
LEU
97
n
101
LEU
97
B
ILE
98
n
102
ILE
98
B
ASP
99
n
103
ASP
99
B
ASN
100
n
104
ASN
100
B
LEU
101
n
105
LEU
101
B
LEU
102
n
106
LEU
102
B
SER
103
n
107
SER
103
B
VAL
104
n
108
VAL
104
B
ARG
105
n
109
ARG
105
B
THR
106
n
110
THR
106
B
ASN
107
n
111
ASN
107
B
ILE
108
n
112
ILE
108
B
SER
109
n
113
SER
109
B
THR
110
n
114
THR
110
B
ILE
111
n
115
ILE
111
B
PHE
112
n
116
PHE
112
B
ILE
113
n
117
ILE
113
B
ARG
114
n
118
ARG
114
B
THR
115
n
119
THR
115
B
ALA
116
n
120
ALA
116
B
PHE
117
n
121
PHE
117
B
ARG
118
n
122
ARG
118
B
GLN
119
n
123
GLN
119
B
HIS
120
n
124
HIS
120
B
PRO
121
n
125
PRO
121
B
ASP
122
n
126
ASP
122
B
LYS
123
n
127
LYS
123
B
ALA
124
n
128
ALA
124
B
GLN
125
n
129
GLN
125
B
GLU
126
n
130
GLU
126
B
VAL
127
n
131
VAL
127
B
LEU
128
n
132
LEU
128
B
ALA
129
n
133
ALA
129
B
THR
130
n
134
THR
130
B
ALA
131
n
135
ALA
131
B
ASN
132
n
136
ASN
132
B
GLU
133
n
137
GLU
133
B
VAL
134
n
138
VAL
134
B
ALA
135
n
139
ALA
135
B
ASP
136
n
140
ASP
136
B
HIS
137
n
141
HIS
137
B
ALA
138
n
142
ALA
138
B
ASP
139
n
143
ASP
139
B
ALA
140
n
144
ALA
140
B
PHE
141
n
145
PHE
141
B
ALA
142
n
146
ALA
142
B
GLU
143
n
147
GLU
143
B
LEU
144
n
148
LEU
144
B
ASP
145
n
149
ASP
145
B
TYR
146
n
150
TYR
146
B
ASN
147
n
151
ASN
147
B
ILE
148
n
152
ILE
148
B
PHE
149
n
153
PHE
149
B
ARG
150
n
154
ARG
150
B
GLY
151
n
155
GLY
151
B
LEU
152
n
156
LEU
152
B
ALA
153
n
157
ALA
153
B
PHE
154
n
158
PHE
154
B
ALA
155
n
159
ALA
155
B
SER
156
n
160
SER
156
B
GLY
157
n
161
GLY
157
B
ASN
158
n
162
ASN
158
B
PRO
159
n
163
PRO
159
B
ILE
160
n
164
ILE
160
B
TYR
161
n
165
TYR
161
B
GLY
162
n
166
GLY
162
B
LEU
163
n
167
LEU
163
B
ILE
164
n
168
ILE
164
B
LEU
165
n
169
LEU
165
B
ASN
166
n
170
ASN
166
B
GLY
167
n
171
GLY
167
B
MET
168
n
172
MET
168
B
LYS
169
n
173
LYS
169
B
GLY
170
n
174
GLY
170
B
LEU
171
n
175
LEU
171
B
TYR
172
n
176
TYR
172
B
THR
173
n
177
THR
173
B
ARG
174
n
178
ARG
174
B
ILE
175
n
179
ILE
175
B
GLY
176
n
180
GLY
176
B
ARG
177
n
181
ARG
177
B
HIS
178
n
182
HIS
178
B
TYR
179
n
183
TYR
179
B
PHE
180
n
184
PHE
180
B
ALA
181
n
185
ALA
181
B
ASN
182
n
186
ASN
182
B
PRO
183
n
187
PRO
183
B
GLU
184
n
188
GLU
184
B
ALA
185
n
189
ALA
185
B
ARG
186
n
190
ARG
186
B
SER
187
n
191
SER
187
B
LEU
188
n
192
LEU
188
B
ALA
189
n
193
ALA
189
B
LEU
190
n
194
LEU
190
B
GLY
191
n
195
GLY
191
B
PHE
192
n
196
PHE
192
B
TYR
193
n
197
TYR
193
B
HIS
194
n
198
HIS
194
B
LYS
195
n
199
LYS
195
B
LEU
196
n
200
LEU
196
B
SER
197
n
201
SER
197
B
ALA
198
n
202
ALA
198
B
LEU
199
n
203
LEU
199
B
CYS
200
n
204
CYS
200
B
SER
201
n
205
SER
201
B
GLU
202
n
206
GLU
202
B
GLY
203
n
207
GLY
203
B
ALA
204
n
208
ALA
204
B
HIS
205
n
209
HIS
205
B
ASP
206
n
210
ASP
206
B
GLN
207
n
211
GLN
207
B
VAL
208
n
212
VAL
208
B
TYR
209
n
213
TYR
209
B
GLU
210
n
214
GLU
210
B
THR
211
n
215
THR
211
B
VAL
212
n
216
VAL
212
B
ARG
213
n
217
ARG
213
B
ARG
214
n
218
ARG
214
B
TYR
215
n
219
TYR
215
B
GLY
216
n
220
GLY
216
B
HIS
217
n
221
HIS
217
B
GLU
218
n
222
GLU
218
B
SER
219
n
223
SER
219
B
GLY
220
n
224
GLY
220
B
GLU
221
n
225
GLU
221
B
ILE
222
n
226
ILE
222
B
TRP
223
n
227
TRP
223
B
HIS
224
n
228
HIS
224
B
ARG
225
n
229
ARG
225
B
MET
226
n
230
MET
226
B
GLN
227
n
231
GLN
227
B
LYS
228
n
232
LYS
228
B
ASN
229
n
233
ASN
229
B
LEU
230
n
234
LEU
230
B
n
235
231
B
n
236
232
B
n
237
233
B
n
238
234
B
n
239
235
B
n
240
236
B
n
241
237
B
n
242
238
B
n
243
239
B
DC
1
n
1
DC
1
X
DA
2
n
2
DA
2
X
DT
3
n
3
DT
3
X
DC
4
n
4
DC
4
X
DT
5
n
5
DT
5
X
DG
6
n
6
DG
6
X
DG
7
n
7
DG
7
X
DT
8
n
8
DT
8
X
DA
9
n
9
DA
9
X
DC
10
n
10
DC
10
X
DG
11
n
11
DG
11
X
DA
12
n
12
DA
12
X
DC
13
n
13
DC
13
X
DC
14
n
14
DC
14
X
DA
15
n
15
DA
15
X
DG
16
n
16
DG
16
X
DA
17
n
17
DA
17
X
DT
18
n
18
DT
18
X
DC
19
n
19
DC
19
X
DG
1
n
1
DG
1
Y
DA
2
n
2
DA
2
Y
DT
3
n
3
DT
3
Y
DC
4
n
4
DC
4
Y
DT
5
n
5
DT
5
Y
DG
6
n
6
DG
6
Y
DG
7
n
7
DG
7
Y
DT
8
n
8
DT
8
Y
DC
9
n
9
DC
9
Y
DG
10
n
10
DG
10
Y
DT
11
n
11
DT
11
Y
DA
12
n
12
DA
12
Y
DC
13
n
13
DC
13
Y
DC
14
n
14
DC
14
Y
DA
15
n
15
DA
15
Y
DG
16
n
16
DG
16
Y
DA
17
n
17
DA
17
Y
DT
18
n
18
DT
18
Y
DG
19
n
19
DG
19
Y
author_and_software_defined_assembly
PQS
4
tetrameric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
CG
GLU
18
A
CG
GLU
22
0
Y
1
A
CD
GLU
18
A
CD
GLU
22
0
Y
1
A
OE1
GLU
18
A
OE1
GLU
22
0
Y
1
A
OE2
GLU
18
A
OE2
GLU
22
0
Y
1
A
CG
GLU
221
A
CG
GLU
225
1
Y
1
A
CD
GLU
221
A
CD
GLU
225
1
Y
1
A
OE1
GLU
221
A
OE1
GLU
225
1
Y
1
A
OE2
GLU
221
A
OE2
GLU
225
1
Y
1
A
CG
ARG
225
A
CG
ARG
229
1
Y
1
A
CD
ARG
225
A
CD
ARG
229
1
Y
1
A
NE
ARG
225
A
NE
ARG
229
1
Y
1
A
CZ
ARG
225
A
CZ
ARG
229
1
Y
1
A
NH1
ARG
225
A
NH1
ARG
229
1
Y
1
A
NH2
ARG
225
A
NH2
ARG
229
1
Y
1
A
CG
GLN
227
A
CG
GLN
231
1
Y
1
A
CD
GLN
227
A
CD
GLN
231
1
Y
1
A
OE1
GLN
227
A
OE1
GLN
231
1
Y
1
A
NE2
GLN
227
A
NE2
GLN
231
1
Y
1
A
CG
LYS
228
A
CG
LYS
232
1
Y
1
A
CD
LYS
228
A
CD
LYS
232
1
Y
1
A
CE
LYS
228
A
CE
LYS
232
1
Y
1
A
NZ
LYS
228
A
NZ
LYS
232
1
Y
1
B
CG
ASP
99
B
CG
ASP
103
0
Y
1
B
OD1
ASP
99
B
OD1
ASP
103
0
Y
1
B
OD2
ASP
99
B
OD2
ASP
103
0
Y
1
B
CG
GLU
184
B
CG
GLU
188
0
Y
1
B
CD
GLU
184
B
CD
GLU
188
0
Y
1
B
OE1
GLU
184
B
OE1
GLU
188
0
Y
1
B
OE2
GLU
184
B
OE2
GLU
188
0
Y
1
B
CG
GLU
221
B
CG
GLU
225
1
Y
1
B
CD
GLU
221
B
CD
GLU
225
1
Y
1
B
OE1
GLU
221
B
OE1
GLU
225
1
Y
1
B
OE2
GLU
221
B
OE2
GLU
225
1
Y
1
B
CG
ARG
225
B
CG
ARG
229
1
Y
1
B
CD
ARG
225
B
CD
ARG
229
1
Y
1
B
NE
ARG
225
B
NE
ARG
229
1
Y
1
B
CZ
ARG
225
B
CZ
ARG
229
1
Y
1
B
NH1
ARG
225
B
NH1
ARG
229
1
Y
1
B
NH2
ARG
225
B
NH2
ARG
229
1
Y
1
B
CG
GLN
227
B
CG
GLN
231
1
Y
1
B
CD
GLN
227
B
CD
GLN
231
1
Y
1
B
OE1
GLN
227
B
OE1
GLN
231
1
Y
1
B
NE2
GLN
227
B
NE2
GLN
231
1
Y
1
B
CG
LYS
228
B
CG
LYS
232
1
Y
1
B
CD
LYS
228
B
CD
LYS
232
1
Y
1
B
CE
LYS
228
B
CE
LYS
232
1
Y
1
B
NZ
LYS
228
B
NZ
LYS
232
1
Y
1
A
PHE
-3
A
PHE
1
1
Y
1
A
ALA
-2
A
ALA
2
1
Y
1
A
ASP
-1
A
ASP
3
1
Y
1
A
ARG
0
A
ARG
4
1
Y
1
A
MET
1
A
MET
5
1
Y
1
A
VAL
2
A
VAL
6
1
Y
1
A
ILE
3
A
ILE
7
1
Y
1
A
LYS
4
A
LYS
8
1
Y
1
A
PRO
231
A
PRO
235
1
Y
1
A
GLY
232
A
GLY
236
1
Y
1
A
ASP
233
A
ASP
237
1
Y
1
B
PHE
-3
B
PHE
1
1
Y
1
B
ALA
-2
B
ALA
2
1
Y
1
B
ASP
-1
B
ASP
3
1
Y
1
B
ARG
0
B
ARG
4
1
Y
1
B
MET
1
B
MET
5
1
Y
1
B
VAL
2
B
VAL
6
1
Y
1
B
ILE
3
B
ILE
7
1
Y
1
B
LYS
4
B
LYS
8
1
Y
1
B
PRO
231
B
PRO
235
1
Y
1
B
GLY
232
B
GLY
236
1
Y
1
B
ASP
233
B
ASP
237
1
Y
1
B
LEU
234
B
LEU
238
1
Y
1
B
ALA
235
B
ALA
239
1
Y
1
B
ILE
236
B
ILE
240
1
Y
1
B
GLN
237
B
GLN
241
1
Y
1
B
GLY
238
B
GLY
242
1
Y
1
B
ARG
239
B
ARG
243
1
Y
1
B
B
O
AU
CYS
AU
200
1231
1.36
A
1
B
B
C
AU
CYS
AU
200
1231
1.63
A
1
B
B
CA
AU
CYS
AU
200
1231
1.73
A
1
A
A
O
OG
THR
SER
106
109
2.03
1
A
A
O
N
LEU
ALA
152
155
2.04
1
A
A
O
O
ARG
HOH
239
2013
2.09
1
5.86
0.90
118.30
124.16
A
A
A
CB
CG
OD2
ASP
ASP
ASP
58
58
58
N
1
-3.80
0.50
120.30
116.50
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
45
45
45
N
1
3.93
0.30
108.30
112.23
X
X
X
O4'
C1'
N1
DC
DC
DC
1
1
1
N
1
2.83
0.30
108.30
111.13
X
X
X
O4'
C1'
N1
DT
DT
DT
3
3
3
N
1
5.68
0.30
108.30
113.98
X
X
X
O4'
C1'
N1
DT
DT
DT
5
5
5
N
1
4.94
0.60
119.90
124.84
X
X
X
N3
C4
O4
DT
DT
DT
5
5
5
N
1
-6.16
0.70
124.90
118.74
X
X
X
C5
C4
O4
DT
DT
DT
5
5
5
N
1
-4.40
0.60
119.00
114.60
X
X
X
C4
C5
C7
DT
DT
DT
5
5
5
N
1
-6.29
0.80
105.90
99.61
X
X
X
O4'
C1'
C2'
DG
DG
DG
6
6
6
N
1
-5.24
0.70
108.00
102.76
X
X
X
O4'
C1'
N9
DG
DG
DG
6
6
6
N
1
-5.63
0.70
108.00
102.37
X
X
X
O4'
C1'
N9
DA
DA
DA
15
15
15
N
1
-8.18
0.70
108.00
99.82
X
X
X
O4'
C1'
N9
DG
DG
DG
16
16
16
N
1
-9.62
0.70
108.00
98.38
X
X
X
O4'
C1'
N9
DA
DA
DA
17
17
17
N
1
2.07
0.30
108.30
110.37
Y
Y
Y
O4'
C1'
N1
DT
DT
DT
3
3
3
N
1
2.91
0.30
108.30
111.21
Y
Y
Y
O4'
C1'
N1
DC
DC
DC
4
4
4
N
1
9.38
0.30
108.30
117.68
Y
Y
Y
O4'
C1'
N1
DT
DT
DT
5
5
5
N
1
3.92
0.60
122.30
126.22
Y
Y
Y
N3
C2
O2
DT
DT
DT
5
5
5
N
1
4.03
0.60
119.90
123.93
Y
Y
Y
N3
C4
O4
DT
DT
DT
5
5
5
N
1
-5.07
0.70
124.90
119.83
Y
Y
Y
C5
C4
O4
DT
DT
DT
5
5
5
N
1
-4.74
0.60
119.00
114.26
Y
Y
Y
C4
C5
C7
DT
DT
DT
5
5
5
N
1
-5.78
0.80
105.90
100.12
Y
Y
Y
O4'
C1'
C2'
DG
DG
DG
7
7
7
N
1
-5.81
0.70
108.00
102.19
Y
Y
Y
O4'
C1'
N9
DG
DG
DG
7
7
7
N
1
3.19
0.30
108.30
111.49
Y
Y
Y
O4'
C1'
N1
DT
DT
DT
8
8
8
N
1
-4.83
0.70
124.90
120.07
Y
Y
Y
C5
C4
O4
DT
DT
DT
8
8
8
N
1
2.34
0.30
108.30
110.64
Y
Y
Y
O4'
C1'
N1
DT
DT
DT
11
11
11
N
1
3.26
0.30
108.30
111.56
Y
Y
Y
O4'
C1'
N9
DA
DA
DA
12
12
12
N
1
-5.01
0.70
108.00
102.99
Y
Y
Y
O4'
C1'
N9
DA
DA
DA
15
15
15
N
1
-2.74
0.40
106.40
103.66
Y
Y
Y
C8
N9
C4
DG
DG
DG
16
16
16
N
1
-4.37
0.70
108.00
103.63
Y
Y
Y
O4'
C1'
N1
DT
DT
DT
18
18
18
N
1
4.59
0.60
119.90
124.49
Y
Y
Y
N3
C4
O4
DT
DT
DT
18
18
18
N
1
-4.51
0.70
124.90
120.39
Y
Y
Y
C5
C4
O4
DT
DT
DT
18
18
18
N
1
-4.40
0.70
108.00
103.60
Y
Y
Y
O4'
C1'
N9
DG
DG
DG
19
19
19
N
1
X
X
O3'
C3'
DC
DC
4
4
-0.047
0.006
1.419
1.372
N
1
X
X
O3'
C3'
DG
DG
7
7
-0.068
0.006
1.419
1.351
N
1
X
X
O3'
C3'
DA
DA
15
15
-0.050
0.006
1.419
1.369
N
1
B
B
O
O
HOH
HOH
2009
2009
0.39
1_555
12_566
1
B
B
O
O
HOH
HOH
2010
2010
0.79
1_555
12_566
1
A
A
CB
CB
ASP
ASP
206
206
1.95
1_555
8_676
1
A
A
O
O
HOH
HOH
2011
2011
2.04
1_555
10_665
1
A
GLN
6
76.73
-140.32
1
A
TYR
15
-68.92
-80.15
1
A
TRP
21
-38.35
-31.71
1
A
ASN
22
-100.01
40.97
1
A
ASN
23
37.97
15.54
1
A
PRO
32
-36.51
157.85
1
A
TRP
60
-66.52
-94.46
1
A
THR
62
-153.64
77.76
1
A
HIS
65
-60.00
-87.52
1
A
TRP
75
-60.99
3.82
1
A
SER
78
174.18
133.81
1
A
LEU
80
-44.59
-17.94
1
A
ASN
81
-62.92
14.36
1
A
LEU
83
-21.91
-71.35
1
A
GLU
84
-40.04
-70.41
1
A
SER
93
-102.11
75.88
1
A
SER
103
-66.85
37.90
1
A
VAL
104
-140.62
-58.90
1
A
THR
106
-82.87
-92.19
1
A
ASN
107
-26.87
-55.27
1
A
PHE
117
-75.88
-74.37
1
A
ALA
124
-57.99
-8.33
1
A
LEU
128
-49.60
-4.01
1
A
ALA
131
-57.15
9.04
1
A
ALA
138
-28.09
-67.70
1
A
ALA
153
-26.56
-78.53
1
A
LYS
169
-1.08
-77.24
1
A
ARG
177
-43.39
-18.62
1
A
HIS
178
-99.25
-65.57
1
A
ASN
182
-65.74
94.73
1
A
GLU
202
-99.92
31.55
1
A
ALA
204
-105.38
43.67
1
A
HIS
205
-14.48
-77.64
1
A
ASP
206
-18.19
-48.78
1
A
VAL
208
-129.84
-81.71
1
A
THR
211
-47.71
-84.08
1
A
GLU
218
-53.85
-74.45
1
A
LYS
228
-64.81
55.55
1
A
ASN
229
-147.43
-27.13
1
A
ILE
236
74.55
147.13
1
A
GLN
237
-137.37
-103.61
1
B
GLN
6
80.88
-151.62
1
B
PRO
8
-38.12
-72.27
1
B
TYR
15
-62.36
-79.02
1
B
ILE
16
-36.54
-31.96
1
B
ASN
23
50.48
-1.55
1
B
THR
46
-34.65
-73.92
1
B
TRP
60
-49.59
-99.10
1
B
LEU
61
-51.51
-166.82
1
B
THR
62
-169.63
77.61
1
B
HIS
65
-65.10
-120.01
1
B
LYS
67
-38.83
152.09
1
B
ASN
81
-59.04
0.76
1
B
LEU
83
-24.71
-47.01
1
B
THR
85
-72.93
43.29
1
B
LEU
86
-137.34
-62.68
1
B
HIS
91
-67.02
19.00
1
B
VAL
94
-25.44
-59.19
1
B
VAL
104
-121.94
-55.89
1
B
THR
106
-72.93
-82.23
1
B
HIS
120
78.60
34.09
1
B
GLU
126
-49.37
-13.54
1
B
VAL
127
-90.55
-63.09
1
B
ALA
135
125.40
160.60
1
B
ASP
136
-93.22
-66.11
1
B
HIS
137
-30.02
142.26
1
B
ASP
139
-32.45
-71.64
1
B
ALA
155
-38.84
-24.39
1
B
LYS
169
-28.86
-63.00
1
B
ARG
177
-58.22
-7.66
1
B
PRO
183
-36.55
-39.13
1
B
GLU
184
-49.94
-17.40
1
B
SER
187
-46.03
-75.28
1
B
SER
197
-23.95
-59.05
1
B
ALA
204
-107.65
69.98
1
B
HIS
205
-32.95
-78.11
1
B
ASP
206
-33.59
-23.55
1
B
VAL
208
-139.74
-52.52
1
B
ARG
214
-69.00
-71.10
1
B
GLU
218
-55.42
-72.92
1
B
LYS
228
-53.21
63.60
1
B
ASN
229
-150.19
-50.70
66.611
5.37
2.68
0.00
5.37
0.00
-8.05
0.320
0.264
0.265
3.25
12.00
391
13374
2.8
98.09
32.
0.
RANDOM
1
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
0.
1E2X
3.25
12.00
25
4434
5
773
3631
0.013
1.7
1.35
1.50
2.05
2.00
2.22
2.00
3.31
2.50
3.250
25.000
1H9T
88082
0.14300
1
6.6000
6.200
98.0
0.45800
3.25
3.38
2.500
1
5.00
98.6
refinement
REFMAC
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
FADR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM E. COLI IN COMPLEX WITH FADB OPERATOR
1
N
N
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
4
N
N
5
N
N
6
N
N
6
N
N
6
N
N
PROTEIN AND THE TWO DNA CHAINS
A
SER
7
A
SER
11
HELX_P
A
ASN
22
A
ASN
26
1
1
16
A
ALA
33
A
ALA
37
HELX_P
A
GLY
42
A
GLY
46
1
2
10
A
THR
44
A
THR
48
HELX_P
A
GLY
59
A
GLY
63
1
3
16
A
ASN
73
A
ASN
77
HELX_P
A
THR
77
A
THR
81
5
4
5
A
GLY
79
A
GLY
83
HELX_P
A
ASN
81
A
ASN
85
5
5
3
A
ILE
82
A
ILE
86
HELX_P
A
ARG
88
A
ARG
92
1
6
7
A
VAL
94
A
VAL
98
HELX_P
A
THR
106
A
THR
110
1
7
13
A
THR
106
A
THR
110
HELX_P
A
GLN
119
A
GLN
123
1
8
14
A
ASP
122
A
ASP
126
HELX_P
A
ALA
129
A
ALA
133
1
9
8
A
THR
130
A
THR
134
HELX_P
A
GLU
133
A
GLU
137
5
10
4
A
HIS
137
A
HIS
141
HELX_P
A
GLY
157
A
GLY
161
1
11
21
A
PRO
159
A
PRO
163
HELX_P
A
PHE
180
A
PHE
184
1
12
22
A
ASN
182
A
ASN
186
HELX_P
A
GLU
202
A
GLU
206
1
13
21
A
VAL
208
A
VAL
212
HELX_P
A
LYS
228
A
LYS
232
1
14
21
B
SER
7
B
SER
11
HELX_P
B
ASN
22
B
ASN
26
1
15
16
B
ALA
33
B
ALA
37
HELX_P
B
GLY
42
B
GLY
46
1
16
10
B
THR
44
B
THR
48
HELX_P
B
GLY
59
B
GLY
63
1
17
16
B
GLY
79
B
GLY
83
HELX_P
B
ILE
82
B
ILE
86
5
18
4
B
LEU
83
B
LEU
87
HELX_P
B
ARG
88
B
ARG
92
1
19
6
B
SER
93
B
SER
97
HELX_P
B
GLN
119
B
GLN
123
1
20
27
B
HIS
120
B
HIS
124
HELX_P
B
ALA
129
B
ALA
133
1
21
10
B
HIS
137
B
HIS
141
HELX_P
B
SER
156
B
SER
160
1
22
20
B
PRO
159
B
PRO
163
HELX_P
B
LYS
169
B
LYS
173
1
23
11
B
MET
168
B
MET
172
HELX_P
B
PHE
180
B
PHE
184
1
24
13
B
PRO
183
B
PRO
187
HELX_P
B
GLY
203
B
GLY
207
1
25
21
B
VAL
208
B
VAL
212
HELX_P
B
LYS
228
B
LYS
232
1
26
21
hydrog
WATSON-CRICK
X
DC
1
C
N3
DC
1
1_555
Y
DG
19
D
N1
DG
19
1_555
hydrog
WATSON-CRICK
X
DC
1
C
N4
DC
1
1_555
Y
DG
19
D
O6
DG
19
1_555
hydrog
WATSON-CRICK
X
DC
1
C
O2
DC
1
1_555
Y
DG
19
D
N2
DG
19
1_555
hydrog
WATSON-CRICK
X
DA
2
C
N1
DA
2
1_555
Y
DT
18
D
N3
DT
18
1_555
hydrog
WATSON-CRICK
X
DA
2
C
N6
DA
2
1_555
Y
DT
18
D
O4
DT
18
1_555
hydrog
WATSON-CRICK
X
DT
3
C
N3
DT
3
1_555
Y
DA
17
D
N1
DA
17
1_555
hydrog
WATSON-CRICK
X
DT
3
C
O4
DT
3
1_555
Y
DA
17
D
N6
DA
17
1_555
hydrog
WATSON-CRICK
X
DC
4
C
N3
DC
4
1_555
Y
DG
16
D
N1
DG
16
1_555
hydrog
WATSON-CRICK
X
DC
4
C
N4
DC
4
1_555
Y
DG
16
D
O6
DG
16
1_555
hydrog
WATSON-CRICK
X
DC
4
C
O2
DC
4
1_555
Y
DG
16
D
N2
DG
16
1_555
hydrog
WATSON-CRICK
X
DT
5
C
N3
DT
5
1_555
Y
DA
15
D
N1
DA
15
1_555
hydrog
WATSON-CRICK
X
DT
5
C
O4
DT
5
1_555
Y
DA
15
D
N6
DA
15
1_555
hydrog
WATSON-CRICK
X
DG
6
C
N1
DG
6
1_555
Y
DC
14
D
N3
DC
14
1_555
hydrog
WATSON-CRICK
X
DG
6
C
N2
DG
6
1_555
Y
DC
14
D
O2
DC
14
1_555
hydrog
WATSON-CRICK
X
DG
6
C
O6
DG
6
1_555
Y
DC
14
D
N4
DC
14
1_555
hydrog
WATSON-CRICK
X
DG
7
C
N1
DG
7
1_555
Y
DC
13
D
N3
DC
13
1_555
hydrog
WATSON-CRICK
X
DG
7
C
N2
DG
7
1_555
Y
DC
13
D
O2
DC
13
1_555
hydrog
WATSON-CRICK
X
DG
7
C
O6
DG
7
1_555
Y
DC
13
D
N4
DC
13
1_555
hydrog
WATSON-CRICK
X
DT
8
C
N3
DT
8
1_555
Y
DA
12
D
N1
DA
12
1_555
hydrog
WATSON-CRICK
X
DT
8
C
O4
DT
8
1_555
Y
DA
12
D
N6
DA
12
1_555
hydrog
WATSON-CRICK
X
DA
9
C
N1
DA
9
1_555
Y
DT
11
D
N3
DT
11
1_555
hydrog
WATSON-CRICK
X
DA
9
C
N6
DA
9
1_555
Y
DT
11
D
O4
DT
11
1_555
hydrog
WATSON-CRICK
X
DC
10
C
N3
DC
10
1_555
Y
DG
10
D
N1
DG
10
1_555
hydrog
WATSON-CRICK
X
DC
10
C
N4
DC
10
1_555
Y
DG
10
D
O6
DG
10
1_555
hydrog
WATSON-CRICK
X
DC
10
C
O2
DC
10
1_555
Y
DG
10
D
N2
DG
10
1_555
hydrog
WATSON-CRICK
X
DG
11
C
N1
DG
11
1_555
Y
DC
9
D
N3
DC
9
1_555
hydrog
WATSON-CRICK
X
DG
11
C
N2
DG
11
1_555
Y
DC
9
D
O2
DC
9
1_555
hydrog
WATSON-CRICK
X
DG
11
C
O6
DG
11
1_555
Y
DC
9
D
N4
DC
9
1_555
hydrog
DA-DT PAIR
X
DA
12
C
N1
DA
12
1_555
Y
DT
8
D
N3
DT
8
1_555
hydrog
WATSON-CRICK
X
DC
13
C
N3
DC
13
1_555
Y
DG
7
D
N1
DG
7
1_555
hydrog
WATSON-CRICK
X
DC
13
C
N4
DC
13
1_555
Y
DG
7
D
O6
DG
7
1_555
hydrog
WATSON-CRICK
X
DC
13
C
O2
DC
13
1_555
Y
DG
7
D
N2
DG
7
1_555
hydrog
WATSON-CRICK
X
DC
14
C
N3
DC
14
1_555
Y
DG
6
D
N1
DG
6
1_555
hydrog
WATSON-CRICK
X
DC
14
C
N4
DC
14
1_555
Y
DG
6
D
O6
DG
6
1_555
hydrog
WATSON-CRICK
X
DC
14
C
O2
DC
14
1_555
Y
DG
6
D
N2
DG
6
1_555
hydrog
WATSON-CRICK
X
DA
15
C
N1
DA
15
1_555
Y
DT
5
D
N3
DT
5
1_555
hydrog
WATSON-CRICK
X
DA
15
C
N6
DA
15
1_555
Y
DT
5
D
O4
DT
5
1_555
hydrog
WATSON-CRICK
X
DG
16
C
N1
DG
16
1_555
Y
DC
4
D
N3
DC
4
1_555
hydrog
WATSON-CRICK
X
DG
16
C
N2
DG
16
1_555
Y
DC
4
D
O2
DC
4
1_555
hydrog
WATSON-CRICK
X
DG
16
C
O6
DG
16
1_555
Y
DC
4
D
N4
DC
4
1_555
hydrog
WATSON-CRICK
X
DA
17
C
N1
DA
17
1_555
Y
DT
3
D
N3
DT
3
1_555
hydrog
WATSON-CRICK
X
DA
17
C
N6
DA
17
1_555
Y
DT
3
D
O4
DT
3
1_555
hydrog
WATSON-CRICK
X
DT
18
C
N3
DT
18
1_555
Y
DA
2
D
N1
DA
2
1_555
hydrog
WATSON-CRICK
X
DT
18
C
O4
DT
18
1_555
Y
DA
2
D
N6
DA
2
1_555
hydrog
WATSON-CRICK
X
DC
19
C
N3
DC
19
1_555
Y
DG
1
D
N1
DG
1
1_555
hydrog
WATSON-CRICK
X
DC
19
C
N4
DC
19
1_555
Y
DG
1
D
O6
DG
1
1_555
hydrog
WATSON-CRICK
X
DC
19
C
O2
DC
19
1_555
Y
DG
1
D
N2
DG
1
1_555
TRANSCRIPTIONAL REGULATION
TRANSCRIPTIONAL REGULATION
given
0.998860
-0.044300
-0.008090
-0.043850
0.937880
0.345860
-0.007680
0.345110
-0.938030
-9.64100
-54.39200
303.78799
1H9T
PDB
1
1H9T
FADR_ECOLI
UNP
1
P09371
1H9T
PDB
2
1H9T
1H9T
PDB
3
1H9T
-3
1
1H9T
-3
1
1H9T
A
1
1
5
1
238
1H9T
2
239
P09371
A
2
6
243
-3
1
1H9T
-3
1
1H9T
B
1
1
5
1
238
1H9T
2
239
P09371
B
2
6
243
1
19
1H9T
1
19
1H9T
X
3
1
19
1
19
1H9T
1
19
1H9T
Y
4
1
19
BINDING SITE FOR RESIDUE CL A1241
Software
1
BINDING SITE FOR RESIDUE CL A1242
Software
1
BINDING SITE FOR RESIDUE AU A1240
Software
4
BINDING SITE FOR RESIDUE AU B1231
Software
3
A
GLN
53
A
GLN
57
1
1_555
A
ARG
174
A
ARG
178
1
1_555
A
PRO
121
A
PRO
125
4
1_555
A
GLN
125
A
GLN
129
4
1_555
A
CYS
200
A
CYS
204
4
1_555
A
SER
201
A
SER
205
4
1_555
B
LEU
199
B
LEU
203
3
1_555
B
CYS
200
B
CYS
204
3
1_555
B
SER
201
B
SER
205
3
1_555
178
P 61 2 2