0.010183
0.000000
0.000000
0.000000
0.010183
0.000000
0.000000
0.000000
0.031546
0.00000
0.00000
0.00000
Unge, T.
Knight, S.
Strandberg, B.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
98.200
98.200
31.700
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
UK
Structure
STRUE6
2005
0969-2126
2
953
961
10.1016/S0969-2126(94)00097-2
7532533
2.2 A resolution structure of the amino-terminal half of HIV-1 reverse transcriptase (fingers and palm subdomains).
1994
10.2210/pdb1har/pdb
pdb_00001har
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
24261.102
HIV-1 REVERSE TRANSCRIPTASE (FINGERS AND PALM SUBDOMAINS)
2.7.7.49
1
man
polymer
18.015
water
90
nat
water
no
no
PISPIETVPVKLKPGMDGPKVAQWPLTAAKIAALVAICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWAKLVDFREL
NKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIF
QSSMTKILAPFKAANPDIVIYQYMDDLYVGSDLAIGAHRTKIEELRQHLLRWGLTT
PISPIETVPVKLKPGMDGPKVAQWPLTAAKIAALVAICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWAKLVDFREL
NKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIF
QSSMTKILAPFKAANPDIVIYQYMDDLYVGSDLAIGAHRTKIEELRQHLLRWGLTT
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Lentivirus
Escherichia
sample
11676
Human immunodeficiency virus 1
562
Escherichia coli
PRT216.ET (DERIVATIVE OF PET)
3.15
60.92
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Other
1
0
1995-04-20
1
1
2008-03-03
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_struct_ref_seq_dif.details
Y
BNL
1994-10-28
REL
REL
HOH
water
HOH
600
2
HOH
HOH
600
A
HOH
601
2
HOH
HOH
601
A
HOH
602
2
HOH
HOH
602
A
HOH
603
2
HOH
HOH
603
A
HOH
604
2
HOH
HOH
604
A
HOH
605
2
HOH
HOH
605
A
HOH
606
2
HOH
HOH
606
A
HOH
607
2
HOH
HOH
607
A
HOH
608
2
HOH
HOH
608
A
HOH
609
2
HOH
HOH
609
A
HOH
610
2
HOH
HOH
610
A
HOH
611
2
HOH
HOH
611
A
HOH
612
2
HOH
HOH
612
A
HOH
613
2
HOH
HOH
613
A
HOH
614
2
HOH
HOH
614
A
HOH
615
2
HOH
HOH
615
A
HOH
616
2
HOH
HOH
616
A
HOH
617
2
HOH
HOH
617
A
HOH
618
2
HOH
HOH
618
A
HOH
619
2
HOH
HOH
619
A
HOH
620
2
HOH
HOH
620
A
HOH
621
2
HOH
HOH
621
A
HOH
622
2
HOH
HOH
622
A
HOH
623
2
HOH
HOH
623
A
HOH
624
2
HOH
HOH
624
A
HOH
625
2
HOH
HOH
625
A
HOH
626
2
HOH
HOH
626
A
HOH
627
2
HOH
HOH
627
A
HOH
628
2
HOH
HOH
628
A
HOH
629
2
HOH
HOH
629
A
HOH
630
2
HOH
HOH
630
A
HOH
631
2
HOH
HOH
631
A
HOH
632
2
HOH
HOH
632
A
HOH
633
2
HOH
HOH
633
A
HOH
634
2
HOH
HOH
634
A
HOH
635
2
HOH
HOH
635
A
HOH
636
2
HOH
HOH
636
A
HOH
637
2
HOH
HOH
637
A
HOH
638
2
HOH
HOH
638
A
HOH
639
2
HOH
HOH
639
A
HOH
640
2
HOH
HOH
640
A
HOH
641
2
HOH
HOH
641
A
HOH
642
2
HOH
HOH
642
A
HOH
643
2
HOH
HOH
643
A
HOH
644
2
HOH
HOH
644
A
HOH
645
2
HOH
HOH
645
A
HOH
646
2
HOH
HOH
646
A
HOH
647
2
HOH
HOH
647
A
HOH
648
2
HOH
HOH
648
A
HOH
649
2
HOH
HOH
649
A
HOH
650
2
HOH
HOH
650
A
HOH
651
2
HOH
HOH
651
A
HOH
652
2
HOH
HOH
652
A
HOH
653
2
HOH
HOH
653
A
HOH
654
2
HOH
HOH
654
A
HOH
655
2
HOH
HOH
655
A
HOH
656
2
HOH
HOH
656
A
HOH
657
2
HOH
HOH
657
A
HOH
658
2
HOH
HOH
658
A
HOH
659
2
HOH
HOH
659
A
HOH
660
2
HOH
HOH
660
A
HOH
661
2
HOH
HOH
661
A
HOH
662
2
HOH
HOH
662
A
HOH
663
2
HOH
HOH
663
A
HOH
664
2
HOH
HOH
664
A
HOH
665
2
HOH
HOH
665
A
HOH
666
2
HOH
HOH
666
A
HOH
667
2
HOH
HOH
667
A
HOH
668
2
HOH
HOH
668
A
HOH
669
2
HOH
HOH
669
A
HOH
670
2
HOH
HOH
670
A
HOH
671
2
HOH
HOH
671
A
HOH
672
2
HOH
HOH
672
A
HOH
673
2
HOH
HOH
673
A
HOH
674
2
HOH
HOH
674
A
HOH
675
2
HOH
HOH
675
A
HOH
676
2
HOH
HOH
676
A
HOH
677
2
HOH
HOH
677
A
HOH
678
2
HOH
HOH
678
A
HOH
679
2
HOH
HOH
679
A
HOH
680
2
HOH
HOH
680
A
HOH
681
2
HOH
HOH
681
A
HOH
682
2
HOH
HOH
682
A
HOH
683
2
HOH
HOH
683
A
HOH
684
2
HOH
HOH
684
A
HOH
685
2
HOH
HOH
685
A
HOH
686
2
HOH
HOH
686
A
HOH
687
2
HOH
HOH
687
A
HOH
688
2
HOH
HOH
688
A
HOH
689
2
HOH
HOH
689
A
PRO
1
n
1
PRO
1
A
ILE
2
n
2
ILE
2
A
SER
3
n
3
SER
3
A
PRO
4
n
4
PRO
4
A
ILE
5
n
5
ILE
5
A
GLU
6
n
6
GLU
6
A
THR
7
n
7
THR
7
A
VAL
8
n
8
VAL
8
A
PRO
9
n
9
PRO
9
A
VAL
10
n
10
VAL
10
A
LYS
11
n
11
LYS
11
A
LEU
12
n
12
LEU
12
A
LYS
13
n
13
LYS
13
A
PRO
14
n
14
PRO
14
A
GLY
15
n
15
GLY
15
A
MET
16
n
16
MET
16
A
ASP
17
n
17
ASP
17
A
GLY
18
n
18
GLY
18
A
PRO
19
n
19
PRO
19
A
LYS
20
n
20
LYS
20
A
VAL
21
n
21
VAL
21
A
ALA
22
n
22
ALA
22
A
GLN
23
n
23
GLN
23
A
TRP
24
n
24
TRP
24
A
PRO
25
n
25
PRO
25
A
LEU
26
n
26
LEU
26
A
THR
27
n
27
THR
27
A
ALA
28
n
28
ALA
28
A
ALA
29
n
29
ALA
29
A
LYS
30
n
30
LYS
30
A
ILE
31
n
31
ILE
31
A
ALA
32
n
32
ALA
32
A
ALA
33
n
33
ALA
33
A
LEU
34
n
34
LEU
34
A
VAL
35
n
35
VAL
35
A
ALA
36
n
36
ALA
36
A
ILE
37
n
37
ILE
37
A
CYS
38
n
38
CYS
38
A
THR
39
n
39
THR
39
A
GLU
40
n
40
GLU
40
A
MET
41
n
41
MET
41
A
GLU
42
n
42
GLU
42
A
LYS
43
n
43
LYS
43
A
GLU
44
n
44
GLU
44
A
GLY
45
n
45
GLY
45
A
LYS
46
n
46
LYS
46
A
ILE
47
n
47
ILE
47
A
SER
48
n
48
SER
48
A
LYS
49
n
49
LYS
49
A
ILE
50
n
50
ILE
50
A
GLY
51
n
51
GLY
51
A
PRO
52
n
52
PRO
52
A
GLU
53
n
53
GLU
53
A
ASN
54
n
54
ASN
54
A
PRO
55
n
55
PRO
55
A
TYR
56
n
56
TYR
56
A
ASN
57
n
57
ASN
57
A
THR
58
n
58
THR
58
A
PRO
59
n
59
PRO
59
A
VAL
60
n
60
VAL
60
A
PHE
61
n
61
PHE
61
A
ALA
62
n
62
ALA
62
A
ILE
63
n
63
ILE
63
A
n
64
64
A
n
65
65
A
n
66
66
A
n
67
67
A
n
68
68
A
n
69
69
A
n
70
70
A
TRP
71
n
71
TRP
71
A
ALA
72
n
72
ALA
72
A
LYS
73
n
73
LYS
73
A
LEU
74
n
74
LEU
74
A
VAL
75
n
75
VAL
75
A
ASP
76
n
76
ASP
76
A
PHE
77
n
77
PHE
77
A
ARG
78
n
78
ARG
78
A
GLU
79
n
79
GLU
79
A
LEU
80
n
80
LEU
80
A
ASN
81
n
81
ASN
81
A
LYS
82
n
82
LYS
82
A
ARG
83
n
83
ARG
83
A
THR
84
n
84
THR
84
A
GLN
85
n
85
GLN
85
A
ASP
86
n
86
ASP
86
A
PHE
87
n
87
PHE
87
A
TRP
88
n
88
TRP
88
A
GLU
89
n
89
GLU
89
A
VAL
90
n
90
VAL
90
A
n
91
91
A
n
92
92
A
n
93
93
A
n
94
94
A
n
95
95
A
n
96
96
A
n
97
97
A
n
98
98
A
n
99
99
A
n
100
100
A
n
101
101
A
n
102
102
A
n
103
103
A
LYS
104
n
104
LYS
104
A
SER
105
n
105
SER
105
A
VAL
106
n
106
VAL
106
A
THR
107
n
107
THR
107
A
VAL
108
n
108
VAL
108
A
LEU
109
n
109
LEU
109
A
ASP
110
n
110
ASP
110
A
VAL
111
n
111
VAL
111
A
GLY
112
n
112
GLY
112
A
ASP
113
n
113
ASP
113
A
ALA
114
n
114
ALA
114
A
TYR
115
n
115
TYR
115
A
PHE
116
n
116
PHE
116
A
SER
117
n
117
SER
117
A
VAL
118
n
118
VAL
118
A
PRO
119
n
119
PRO
119
A
LEU
120
n
120
LEU
120
A
ASP
121
n
121
ASP
121
A
GLU
122
n
122
GLU
122
A
ASP
123
n
123
ASP
123
A
PHE
124
n
124
PHE
124
A
ARG
125
n
125
ARG
125
A
LYS
126
n
126
LYS
126
A
TYR
127
n
127
TYR
127
A
THR
128
n
128
THR
128
A
ALA
129
n
129
ALA
129
A
PHE
130
n
130
PHE
130
A
THR
131
n
131
THR
131
A
ILE
132
n
132
ILE
132
A
PRO
133
n
133
PRO
133
A
SER
134
n
134
SER
134
A
ILE
135
n
135
ILE
135
A
ASN
136
n
136
ASN
136
A
ASN
137
n
137
ASN
137
A
GLU
138
n
138
GLU
138
A
THR
139
n
139
THR
139
A
PRO
140
n
140
PRO
140
A
GLY
141
n
141
GLY
141
A
ILE
142
n
142
ILE
142
A
ARG
143
n
143
ARG
143
A
TYR
144
n
144
TYR
144
A
GLN
145
n
145
GLN
145
A
TYR
146
n
146
TYR
146
A
ASN
147
n
147
ASN
147
A
VAL
148
n
148
VAL
148
A
LEU
149
n
149
LEU
149
A
PRO
150
n
150
PRO
150
A
GLN
151
n
151
GLN
151
A
GLY
152
n
152
GLY
152
A
TRP
153
n
153
TRP
153
A
LYS
154
n
154
LYS
154
A
GLY
155
n
155
GLY
155
A
SER
156
n
156
SER
156
A
PRO
157
n
157
PRO
157
A
ALA
158
n
158
ALA
158
A
ILE
159
n
159
ILE
159
A
PHE
160
n
160
PHE
160
A
GLN
161
n
161
GLN
161
A
SER
162
n
162
SER
162
A
SER
163
n
163
SER
163
A
MET
164
n
164
MET
164
A
THR
165
n
165
THR
165
A
LYS
166
n
166
LYS
166
A
ILE
167
n
167
ILE
167
A
LEU
168
n
168
LEU
168
A
ALA
169
n
169
ALA
169
A
PRO
170
n
170
PRO
170
A
PHE
171
n
171
PHE
171
A
LYS
172
n
172
LYS
172
A
ALA
173
n
173
ALA
173
A
ALA
174
n
174
ALA
174
A
ASN
175
n
175
ASN
175
A
PRO
176
n
176
PRO
176
A
ASP
177
n
177
ASP
177
A
ILE
178
n
178
ILE
178
A
VAL
179
n
179
VAL
179
A
ILE
180
n
180
ILE
180
A
TYR
181
n
181
TYR
181
A
GLN
182
n
182
GLN
182
A
TYR
183
n
183
TYR
183
A
MET
184
n
184
MET
184
A
ASP
185
n
185
ASP
185
A
ASP
186
n
186
ASP
186
A
LEU
187
n
187
LEU
187
A
TYR
188
n
188
TYR
188
A
VAL
189
n
189
VAL
189
A
GLY
190
n
190
GLY
190
A
SER
191
n
191
SER
191
A
ASP
192
n
192
ASP
192
A
LEU
193
n
193
LEU
193
A
ALA
194
n
194
ALA
194
A
ILE
195
n
195
ILE
195
A
GLY
196
n
196
GLY
196
A
ALA
197
n
197
ALA
197
A
HIS
198
n
198
HIS
198
A
ARG
199
n
199
ARG
199
A
THR
200
n
200
THR
200
A
LYS
201
n
201
LYS
201
A
ILE
202
n
202
ILE
202
A
GLU
203
n
203
GLU
203
A
GLU
204
n
204
GLU
204
A
LEU
205
n
205
LEU
205
A
ARG
206
n
206
ARG
206
A
GLN
207
n
207
GLN
207
A
HIS
208
n
208
HIS
208
A
LEU
209
n
209
LEU
209
A
LEU
210
n
210
LEU
210
A
ARG
211
n
211
ARG
211
A
TRP
212
n
212
TRP
212
A
GLY
213
n
213
GLY
213
A
LEU
214
n
214
LEU
214
A
THR
215
n
215
THR
215
A
THR
216
n
216
THR
216
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
SER
48
A
O
SER
48
A
N
GLN
145
A
N
GLN
145
A
O
ILE
142
A
O
ILE
142
A
N
ILE
132
A
N
ILE
132
A
O
PHE
61
A
O
PHE
61
A
N
LEU
74
A
N
LEU
74
A
O
SER
105
A
O
SER
105
A
N
SER
191
A
N
SER
191
A
O
ASP
186
A
O
ASP
186
A
N
TYR
183
A
N
TYR
183
1
A
OG
SER
134
A
OG
SER
134
1
Y
1
A
CG1
ILE
135
A
CG1
ILE
135
1
Y
1
A
CG2
ILE
135
A
CG2
ILE
135
1
Y
1
A
CD1
ILE
135
A
CD1
ILE
135
1
Y
1
A
CG
ASN
136
A
CG
ASN
136
1
Y
1
A
OD1
ASN
136
A
OD1
ASN
136
1
Y
1
A
ND2
ASN
136
A
ND2
ASN
136
1
Y
1
A
CG
ASN
137
A
CG
ASN
137
1
Y
1
A
OD1
ASN
137
A
OD1
ASN
137
1
Y
1
A
ND2
ASN
137
A
ND2
ASN
137
1
Y
1
A
CG
GLU
138
A
CG
GLU
138
1
Y
1
A
CD
GLU
138
A
CD
GLU
138
1
Y
1
A
OE1
GLU
138
A
OE1
GLU
138
1
Y
1
A
OE2
GLU
138
A
OE2
GLU
138
1
Y
1
A
OG1
THR
139
A
OG1
THR
139
1
Y
1
A
CG2
THR
139
A
CG2
THR
139
1
Y
1
A
LYS
64
A
LYS
64
1
Y
1
A
LYS
65
A
LYS
65
1
Y
1
A
LYS
66
A
LYS
66
1
Y
1
A
ASP
67
A
ASP
67
1
Y
1
A
SER
68
A
SER
68
1
Y
1
A
THR
69
A
THR
69
1
Y
1
A
LYS
70
A
LYS
70
1
Y
1
A
GLN
91
A
GLN
91
1
Y
1
A
LEU
92
A
LEU
92
1
Y
1
A
GLY
93
A
GLY
93
1
Y
1
A
ILE
94
A
ILE
94
1
Y
1
A
PRO
95
A
PRO
95
1
Y
1
A
HIS
96
A
HIS
96
1
Y
1
A
PRO
97
A
PRO
97
1
Y
1
A
ALA
98
A
ALA
98
1
Y
1
A
GLY
99
A
GLY
99
1
Y
1
A
LEU
100
A
LEU
100
1
Y
1
A
LYS
101
A
LYS
101
1
Y
1
A
LYS
102
A
LYS
102
1
Y
1
A
LYS
103
A
LYS
103
1
Y
1
A
PRO
4
-78.86
38.99
1
A
ASN
137
58.99
14.22
1
A
GLU
138
-65.22
-87.41
1
A
ASP
185
81.17
-19.24
45.
0.2700000
0.2080000
0.2080000
2.2
7.0
14650
1
2.0
2.2
7.0
90
1632
0
0
1542
0.012
1.3
1HAR
14650
1
96.
model building
X-PLOR
refinement
X-PLOR
phasing
X-PLOR
2.2 ANGSTROMS RESOLUTION STRUCTURE OF THE AMINO-TERMINAL HALF OF HIV-1 REVERSE TRANSCRIPTASE (FINGERS AND PALM SUBDOMAINS)
1
N
N
2
N
N
A
ALA
28
A
ALA
28
HELX_P
A
LYS
43
A
LYS
43
1
1
16
A
ARG
78
A
ARG
78
HELX_P
A
ARG
83
A
ARG
83
1
2
6
A
GLY
112
A
GLY
112
HELX_P
A
SER
117
A
SER
117
5
3
6
A
ARG
125
A
ARG
125
HELX_P
A
THR
128
A
THR
128
5
4
4
A
ILE
135
A
ILE
135
HELX_P
A
ASN
137
A
ASN
137
5
5
3
A
SER
156
A
SER
156
HELX_P
A
ALA
174
A
ALA
174
1
6
19
A
ILE
195
A
ILE
195
HELX_P
A
TRP
212
A
TRP
212
1
7
18
Viral protein, transferase
REVERSE TRANSCRIPTASE, Viral protein, transferase, DNA POLYMERASE, FINGERS-PALM SUBDOMAINS, N-TERMINAL HALF
Q8UTX6_9HIV1
UNP
1
1
Q8UTX6
FFREDLAFLQGKAREFSSEQTRANSPTISSEQTRANSPTRRELQVWGRDNNSPSEAGADRQGTVSFNFPQITLWQRPLVT
IKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQ
IGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRK
LVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGW
KGSPAIFQSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYE
LHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKEP
VHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPI
QKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTT
NQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVS
AGIRKILFLDGIDKAQDEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVI
LVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVES
MNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRNP
LWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED
168
383
1HAR
1
216
Q8UTX6
A
1
1
216
1
LYS
conflict
ALA
22
1HAR
A
Q8UTX6
UNP
189
22
1
GLU
conflict
ALA
28
1HAR
A
Q8UTX6
UNP
195
28
1
GLU
conflict
ALA
29
1HAR
A
Q8UTX6
UNP
196
29
1
LYS
conflict
ALA
32
1HAR
A
Q8UTX6
UNP
199
32
1
GLU
conflict
ALA
36
1HAR
A
Q8UTX6
UNP
203
36
1
ARG
conflict
ALA
72
1HAR
A
Q8UTX6
UNP
239
72
1
GLU
conflict
ALA
169
1HAR
A
Q8UTX6
UNP
336
169
1
LYS
conflict
ALA
173
1HAR
A
Q8UTX6
UNP
340
173
1
GLN
conflict
ALA
174
1HAR
A
Q8UTX6
UNP
341
174
1
GLU
conflict
ALA
194
1HAR
A
Q8UTX6
UNP
361
194
1
GLN
conflict
ALA
197
1HAR
A
Q8UTX6
UNP
364
197
3
2
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ILE
47
A
ILE
47
A
LYS
49
A
LYS
49
A
ILE
142
A
ILE
142
A
TYR
146
A
TYR
146
A
PHE
130
A
PHE
130
A
ILE
132
A
ILE
132
A
VAL
60
A
VAL
60
A
ILE
63
A
ILE
63
A
ALA
72
A
ALA
72
A
VAL
75
A
VAL
75
A
SER
105
A
SER
105
A
ASP
110
A
ASP
110
A
ASP
186
A
ASP
186
A
SER
191
A
SER
191
A
ILE
178
A
ILE
178
A
TYR
183
A
TYR
183
Unknown
3
A
ASP
110
A
ASP
110
3
1_555
A
ASP
185
A
ASP
185
3
1_555
A
ASP
186
A
ASP
186
3
1_555
78
P 43