0.006637 0.000000 0.000000 0.000000 0.006637 0.000000 0.000000 0.000000 0.015664 0.00000 0.00000 0.00000 Conn, G.L. Draper, D.E. Lattman, E.E. Gittis, A.G. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.00 90.00 90.00 150.675 150.675 63.841 C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C9 H14 N3 O8 P 323.197 y CYTIDINE-5'-MONOPHOSPHATE RNA linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C10 H16 N5 O14 P3 523.180 n GUANOSINE-5'-TRIPHOSPHATE non-polymer H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking K 1 39.098 POTASSIUM ION non-polymer C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mg 2 24.305 MAGNESIUM ION non-polymer Os 3 190.230 OSMIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H13 N2 O9 P 324.181 y URIDINE-5'-MONOPHOSPHATE RNA linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 318 963 10.1016/S0022-2836(02)00147-X 12054794 A Compact RNA Tertiary Structure Contains a Buried Backbone-K+ Complex 2002 US Science SCIEAS 0038 0036-8075 284 1171 10.1126/SCIENCE.284.5417.1171 10325228 Crystal Structure of a Conserved Ribosomal Protein-RNA Complex 1999 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.0 1 IMAGE PLATE 1998-09-09 RIGAKU IMAGE PLATE SINGLE WAVELENGTH M x-ray 1 1.13951 1.0 X4A NSLS 1.13951 SYNCHROTRON NSLS BEAMLINE X4A 8167.547 RIBOSOMAL PROTEIN L11 C-TERMINAL DOMAIN OF RIBOSOMAL PROTEIN L11 2 man polymer 18885.150 58 NUCLEOTIDE RIBOSOMAL 23S RNA DOMAIN NTS 1051-1108 FROM E. COLI 23S RRNA YES 2 man polymer 24.305 MAGNESIUM ION 21 syn non-polymer 39.098 POTASSIUM ION 2 syn non-polymer 190.230 OSMIUM ION 4 syn non-polymer 18.015 water 13 nat water no no FTFITKTPPAAVLLKKAAGIESGSGEPNRNKVATIKRDKVREIAELKMPDLNAASIEAAMRMIEGTARSMGIVVEN FTFITKTPPAAVLLKKAAGIESGSGEPNRNKVATIKRDKVREIAELKMPDLNAASIEAAMRMIEGTARSMGIVVEN A,B polypeptide(L) no yes (GTP)CCAGGAUGUAGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGU GCCAGGAUGUAGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACUGGU C,D polyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 1422 BACILLUS STEAROTHERMOPHILUS 469008 ESCHERICHIA COLI BL21(DE3) PLASMID PET11 sample RNA SYNTHESIZED BY IN VITRO TRANSCRIPTION USING T7 RNA POLYMERASE 562 ESCHERICHIA COLI 562 ESCHERICHIA COLI 1 3.35 70 6.50 PEG 600, MAGNESIUM ACETATE, COBALT HEXAMINE CHLORIDE, SODIUM CACODYLATE, KCL, pH 6.50 -7.297 1 28 C 101 C 158 -3.420 C_GTP101:U158_C 1 -10.846 -2.354 0.175 -0.581 -0.145 1 19 C 102 C 157 4.280 C_C102:G157_C 2 -17.423 0.264 0.528 -0.071 0.158 1 19 C 103 C 156 -0.490 C_C103:G156_C 3 -6.958 0.190 -0.331 -0.290 -0.042 1 20 C 104 C 155 3.841 C_A104:U155_C 4 1.250 -0.245 0.145 0.063 -6.877 1 19 C 105 C 154 4.609 C_G105:C154_C 5 -14.412 -0.312 -0.355 0.074 -11.947 10 11 C 106 C 153 -7.499 C_G106:A153_C 6 -12.180 6.690 -0.086 -4.256 -2.857 1 19 C 137 C 152 3.582 C_G137:C152_C 7 -3.826 0.443 -0.253 0.024 -19.227 1 20 C 140 C 151 7.149 C_A140:U151_C 8 -0.914 -0.434 -0.439 -0.143 -7.898 1 19 C 141 C 150 3.396 C_G141:C150_C 9 2.587 -0.329 -0.313 -0.121 4.661 1 19 C 142 C 149 -3.775 C_C142:G149_C 10 1.289 0.578 -0.361 -0.392 -5.169 10 11 C 143 C 148 -4.481 C_G143:A148_C 11 7.505 6.643 -0.475 -4.073 10.424 2 21 C 136 C 132 174.500 C_A136:U132_C 12 -7.410 0.231 0.038 1.135 6.915 1 20 C 107 C 131 0.363 C_A107:U131_C 13 -22.759 0.510 -0.156 -0.220 -4.422 1 20 C 108 C 130 1.783 C_U108:A130_C 14 -10.441 -0.241 -0.281 -0.260 0.112 1 19 C 109 C 129 -2.541 C_G109:C129_C 15 3.163 -0.071 0.357 -0.122 -8.518 3 23 C 110 C 138 -69.657 C_U110:A138_C 16 5.715 -1.091 0.447 3.815 8.631 1 19 C 112 C 126 -10.180 C_G112:C126_C 17 -5.198 -0.381 0.418 -0.075 3.214 1 19 C 113 C 125 4.187 C_G113:C125_C 18 -15.253 -0.574 0.403 -0.052 -1.275 1 19 C 114 C 124 5.368 C_C114:G124_C 19 -19.118 0.129 -0.031 -0.062 -12.668 C 115 C 123 -2.534 C_U115:A123_C 20 -9.566 5.148 0.061 -0.961 -2.723 1 28 D 301 D 358 -3.363 D_GTP301:U358_D 21 -7.871 -2.404 0.334 -0.727 2.328 1 19 D 302 D 357 -1.358 D_C302:G357_D 22 -16.912 0.658 0.086 -0.423 -4.621 1 19 D 303 D 356 -1.394 D_C303:G356_D 23 -11.515 -0.068 -0.054 -0.155 -2.424 1 20 D 304 D 355 6.201 D_A304:U355_D 24 -4.175 0.115 0.225 0.077 0.513 1 19 D 305 D 354 1.416 D_G305:C354_D 25 -7.318 -0.303 0.098 -0.063 -15.121 10 11 D 306 D 353 -4.142 D_G306:A353_D 26 -8.872 6.917 0.015 -4.190 -3.986 1 19 D 337 D 352 1.929 D_G337:C352_D 27 -4.681 0.084 -0.326 -0.056 -11.608 1 20 D 340 D 351 5.131 D_A340:U351_D 28 -2.723 -0.414 -0.306 -0.309 -1.938 1 19 D 341 D 350 -0.164 D_G341:C350_D 29 8.903 0.071 -0.504 -0.197 7.777 1 19 D 342 D 349 -0.382 D_C342:G349_D 30 2.290 0.469 -0.570 -0.189 -6.194 10 11 D 343 D 348 -7.208 D_G343:A348_D 31 3.361 6.862 -0.088 -4.023 10.295 2 21 D 336 D 332 175.896 D_A336:U332_D 32 -4.364 0.134 -0.206 1.453 8.860 1 20 D 307 D 331 -0.199 D_A307:U331_D 33 -17.530 0.179 0.242 -0.110 -10.589 1 20 D 308 D 330 -4.158 D_U308:A330_D 34 -13.147 0.265 0.018 -0.231 -2.043 1 19 D 309 D 329 -0.188 D_G309:C329_D 35 -6.095 0.127 0.216 -0.051 -8.468 3 23 D 310 D 338 -66.401 D_U310:A338_D 36 9.232 -0.755 0.848 3.841 10.330 1 19 D 312 D 326 -9.417 D_G312:C326_D 37 -1.456 -0.011 0.642 -0.101 0.405 1 19 D 313 D 325 4.083 D_G313:C325_D 38 -24.136 -0.039 -0.010 -0.121 -1.497 1 19 D 314 D 324 6.579 D_C314:G324_D 39 -26.426 0.465 0.114 -0.143 -10.167 D 315 D 323 2.556 D_U315:A323_D 40 -9.525 5.554 0.114 -1.163 2.919 42.397 C C 101 102 4.489 C C 158 157 3.024 3.241 -0.076 -1.311 CC_GTP101C102:G157U158_CC 1 -2.637 3.651 42.200 -2.114 -0.140 2.375 33.284 C C 102 103 15.727 C C 157 156 3.051 8.880 -0.585 -1.817 CC_C102C103:G156G157_CC 2 4.312 -7.637 31.826 -4.431 1.633 2.844 27.731 C C 103 104 10.276 C C 156 155 3.295 4.892 0.733 -1.809 CC_C103A104:U155G156_CC 3 -2.772 5.822 27.166 -4.894 -2.165 2.323 30.832 C C 104 105 27.051 C C 155 154 3.484 13.822 0.659 -1.957 CC_A104G105:C154U155_CC 4 5.044 -9.872 27.170 -6.232 -0.310 3.522 69.940 C C 105 106 10.227 C C 154 153 3.706 11.676 -0.418 -0.809 CC_G105G106:A153C154_CC 5 4.057 -3.554 68.976 -1.170 0.526 2.507 44.152 C C 106 137 2.102 C C 153 152 3.234 1.567 -3.092 1.373 CC_G106G137:C152A153_CC 6 10.346 -13.883 42.954 1.696 4.978 3.476 44.198 C C 137 140 4.830 C C 152 151 3.802 3.629 -1.981 -2.639 CC_G137A140:U151C152_CC 7 2.434 -3.239 43.993 -3.886 2.887 3.151 23.690 C C 140 141 -0.710 C C 151 150 3.144 -0.291 -0.753 -2.480 CC_A140G141:C150U151_CC 8 0.689 -1.678 23.679 -5.948 2.055 3.017 33.750 C C 141 142 0.486 C C 150 149 3.046 0.282 -0.322 -2.096 CC_G141C142:G149C150_CC 9 1.129 -1.945 33.731 -3.653 0.724 3.629 54.961 C C 142 143 2.002 C C 149 148 3.676 1.847 0.250 -1.731 CC_C142G143:A148G149_CC 10 2.895 -3.139 54.862 -1.998 -0.079 1.317 177.044 C C 136 107 -75.133 C C 132 131 1.081 -149.791 -2.663 -2.479 CC_A136A107:U131U132_CC 11 83.983 -42.125 138.090 -1.047 1.440 2.918 35.997 C C 107 108 12.338 C C 131 130 3.362 7.568 -0.411 -1.918 CC_A107U108:A130U131_CC 12 -1.993 3.250 35.164 -4.150 0.389 2.780 29.600 C C 108 109 14.168 C C 130 129 3.265 7.160 -1.099 -2.005 CC_U108G109:C129A130_CC 13 -2.637 5.218 28.621 -5.349 1.627 -2.083 177.784 C C 109 110 84.827 C C 129 138 -2.003 169.386 -3.178 -0.164 CC_G109U110:A138C129_CC 14 22.173 -11.104 152.004 0.166 1.557 2.926 35.727 C C 112 113 8.636 C C 126 125 3.211 5.279 0.496 -1.617 CC_G112G113:C125C126_CC 15 -1.387 2.269 35.321 -3.354 -0.997 3.301 35.614 C C 113 114 3.414 C C 125 124 3.322 2.074 0.832 -2.020 CC_G113C114:G124C125_CC 16 7.036 -11.581 34.875 -3.612 -0.313 3.475 51.782 C C 114 115 6.808 C C 124 123 3.575 5.926 0.290 -0.859 CC_C114U115:A123G124_CC 17 5.188 -5.961 51.220 -1.416 0.047 2.998 46.585 D D 301 302 6.344 D D 358 357 3.160 5.008 -0.228 -1.397 DD_GTP301C302:G357U358_DD 18 0.640 -0.811 46.325 -2.162 0.339 2.287 31.269 D D 302 303 22.758 D D 357 356 3.236 11.967 -0.477 -1.931 DD_C302C303:G356G357_DD 19 -0.706 1.343 28.932 -5.575 0.768 2.596 30.595 D D 303 304 14.340 D D 356 355 3.143 7.492 0.688 -1.828 DD_C303A304:U355G356_DD 20 -0.780 1.493 29.675 -4.785 -1.442 2.524 26.856 D D 304 305 17.384 D D 355 354 3.221 7.954 0.506 -1.977 DD_A304G305:C354U355_DD 21 1.199 -2.621 25.644 -6.098 -0.811 3.668 71.016 D D 305 306 11.520 D D 354 353 3.914 13.304 -0.266 -0.930 DD_G305G306:A353C354_DD 22 7.427 -6.431 69.573 -1.340 0.530 2.304 43.280 D D 306 337 1.628 D D 353 352 3.139 1.190 -3.428 1.198 DD_G306G337:C352A353_DD 23 10.347 -14.155 42.067 1.526 5.502 3.275 45.639 D D 337 340 4.280 D D 352 351 3.551 3.316 -1.835 -2.712 DD_G337A340:U351C352_DD 24 2.052 -2.649 45.480 -3.799 2.553 2.700 24.203 D D 340 341 6.644 D D 351 350 3.070 2.778 -0.775 -2.603 DD_A340G341:C350U351_DD 25 1.562 -3.737 23.995 -6.990 2.288 3.253 32.627 D D 341 342 -2.782 D D 350 349 3.151 -1.562 0.075 -2.246 DD_G341C342:G349C350_DD 26 0.199 -0.354 32.590 -3.732 -0.099 3.516 56.820 D D 342 343 8.472 D D 349 348 3.803 8.033 -0.171 -1.817 DD_C342G343:A348G349_DD 27 4.014 -4.233 56.164 -2.412 0.431 1.493 179.422 D D 336 307 -75.481 D D 332 331 1.479 -150.942 -2.688 -1.772 DD_A336A307:U331U332_DD 28 83.310 -41.661 171.258 -0.837 1.371 2.770 41.852 D D 307 308 15.408 D D 331 330 3.435 10.887 -0.762 -2.348 DD_A307U308:A330U331_DD 29 -1.866 2.640 40.431 -4.388 0.878 2.674 26.037 D D 308 309 11.805 D D 330 329 3.114 5.283 -1.250 -1.786 DD_U308G309:C329A330_DD 30 0.430 -0.962 25.501 -5.259 2.881 -2.131 -177.945 D D 309 310 84.113 D D 329 338 -2.027 -168.013 2.854 -1.179 DD_G309U310:A338C329_DD 31 -26.645 -13.340 -155.977 0.374 1.461 3.150 35.566 D D 312 313 12.558 D D 326 325 3.565 7.608 0.276 -1.680 DD_G312G313:C325C326_DD 32 2.695 -4.448 34.667 -3.904 -0.043 3.109 35.638 D D 313 314 3.986 D D 325 324 3.187 2.436 0.859 -1.776 DD_G313C314:G324C325_DD 33 2.257 -3.693 35.488 -3.243 -1.088 3.321 52.053 D D 314 315 9.452 D D 324 323 3.525 8.245 0.017 -0.961 DD_C314U315:A323G324_DD 34 6.621 -7.591 51.041 -1.677 0.448 repository Initial release Version format compliance Version format compliance 1 0 2002-05-23 1 1 2011-05-08 1 2 2011-07-13 L11 RIBOSOMAL PROTEIN RNA BINDING DOMAIN, NMR, 20 STRUCTURES IDENTIFICATION OF KNOWN PROTEIN AND RNA STRUCTURES IN A 5 AMAP OF THE LARGE RIBOSOMAL SUBUNIT FROM HALOARCULAMARISMORTUI NMR STRUCTURE OF L11-C76, THE C-TERMINAL DOMAIN OF50S RIBOSOMAL PROTEIN L11, MINIMIZED AVERAGE STRUCTURE NMR STRUCTURE OF L11-C76, THE C-TERMINAL DOMAIN OF50S RIBOSOMAL PROTEIN L11, 33 STRUCTURES THE RNA BINDING DOMAIN OF RIBOSOMAL PROTEIN L11:THREE-DIMENSIONAL STRUCTURE OF THE RNA -BOUND FORM OF THEPROTEIN, NMR, MINIMIZED AVERAGE STRUCTURE CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNACOMPLEX THE RNA BINDING DOMAIN OF RIBOSOMAL PROTEIN L11:THREE-DIMENSIONAL STRUCTURE OF THE RNA -BOUND FORM OF THEPROTEIN, NMR, 26 STRUCTURES PDBE Y PDBE 2001-04-27 REL MG MAGNESIUM ION K POTASSIUM ION OS OSMIUM ION HOH water CHAIN C, D ENGINEERED MUTATION U1601A MG 1159 3 MG MG 1159 C MG 1160 3 MG MG 1160 C MG 1161 3 MG MG 1161 C K 1162 4 K K 1162 C MG 1163 3 MG MG 1163 C MG 1164 3 MG MG 1164 C MG 1165 3 MG MG 1165 C MG 1166 3 MG MG 1166 C MG 1167 3 MG MG 1167 C MG 1168 3 MG MG 1168 C OS 1169 5 OS OS 1169 C OS 1170 5 OS OS 1170 C MG 1172 3 MG MG 1172 C MG 1359 3 MG MG 1359 D MG 1360 3 MG MG 1360 D MG 1361 3 MG MG 1361 D K 1362 4 K K 1362 D MG 1363 3 MG MG 1363 D MG 1364 3 MG MG 1364 D MG 1365 3 MG MG 1365 D MG 1366 3 MG MG 1366 D MG 1367 3 MG MG 1367 D MG 1368 3 MG MG 1368 D MG 1369 3 MG MG 1369 D OS 1370 5 OS OS 1370 D OS 1371 5 OS OS 1371 D MG 1372 3 MG MG 1372 D HOH 2001 6 HOH HOH 2001 A HOH 2001 6 HOH HOH 2001 B HOH 2001 6 HOH HOH 2001 C HOH 2002 6 HOH HOH 2002 C HOH 2003 6 HOH HOH 2003 C HOH 2004 6 HOH HOH 2004 C HOH 2005 6 HOH HOH 2005 C HOH 2006 6 HOH HOH 2006 C HOH 2001 6 HOH HOH 2001 D HOH 2002 6 HOH HOH 2002 D HOH 2003 6 HOH HOH 2003 D HOH 2004 6 HOH HOH 2004 D HOH 2005 6 HOH HOH 2005 D n 1 1 A THR 2 n 2 THR 2 A PHE 3 n 3 PHE 3 A ILE 4 n 4 ILE 4 A THR 5 n 5 THR 5 A LYS 6 n 6 LYS 6 A THR 7 n 7 THR 7 A PRO 8 n 8 PRO 8 A PRO 9 n 9 PRO 9 A ALA 10 n 10 ALA 10 A ALA 11 n 11 ALA 11 A VAL 12 n 12 VAL 12 A LEU 13 n 13 LEU 13 A LEU 14 n 14 LEU 14 A LYS 15 n 15 LYS 15 A LYS 16 n 16 LYS 16 A ALA 17 n 17 ALA 17 A ALA 18 n 18 ALA 18 A GLY 19 n 19 GLY 19 A ILE 20 n 20 ILE 20 A GLU 21 n 21 GLU 21 A SER 22 n 22 SER 22 A GLY 23 n 23 GLY 23 A SER 24 n 24 SER 24 A GLY 25 n 25 GLY 25 A GLU 26 n 26 GLU 26 A PRO 27 n 27 PRO 27 A ASN 28 n 28 ASN 28 A ARG 29 n 29 ARG 29 A ASN 30 n 30 ASN 30 A LYS 31 n 31 LYS 31 A VAL 32 n 32 VAL 32 A ALA 33 n 33 ALA 33 A THR 34 n 34 THR 34 A ILE 35 n 35 ILE 35 A LYS 36 n 36 LYS 36 A ARG 37 n 37 ARG 37 A ASP 38 n 38 ASP 38 A LYS 39 n 39 LYS 39 A VAL 40 n 40 VAL 40 A ARG 41 n 41 ARG 41 A GLU 42 n 42 GLU 42 A ILE 43 n 43 ILE 43 A ALA 44 n 44 ALA 44 A GLU 45 n 45 GLU 45 A LEU 46 n 46 LEU 46 A LYS 47 n 47 LYS 47 A MET 48 n 48 MET 48 A PRO 49 n 49 PRO 49 A ASP 50 n 50 ASP 50 A LEU 51 n 51 LEU 51 A ASN 52 n 52 ASN 52 A ALA 53 n 53 ALA 53 A ALA 54 n 54 ALA 54 A SER 55 n 55 SER 55 A ILE 56 n 56 ILE 56 A GLU 57 n 57 GLU 57 A ALA 58 n 58 ALA 58 A ALA 59 n 59 ALA 59 A MET 60 n 60 MET 60 A ARG 61 n 61 ARG 61 A MET 62 n 62 MET 62 A ILE 63 n 63 ILE 63 A GLU 64 n 64 GLU 64 A GLY 65 n 65 GLY 65 A THR 66 n 66 THR 66 A ALA 67 n 67 ALA 67 A ARG 68 n 68 ARG 68 A SER 69 n 69 SER 69 A MET 70 n 70 MET 70 A GLY 71 n 71 GLY 71 A ILE 72 n 72 ILE 72 A VAL 73 n 73 VAL 73 A VAL 74 n 74 VAL 74 A GLU 75 n 75 GLU 75 A n 76 76 A n 1 201 B n 2 202 B n 3 203 B n 4 204 B n 5 205 B LYS 206 n 6 LYS 206 B THR 207 n 7 THR 207 B PRO 208 n 8 PRO 208 B PRO 209 n 9 PRO 209 B ALA 210 n 10 ALA 210 B ALA 211 n 11 ALA 211 B VAL 212 n 12 VAL 212 B LEU 213 n 13 LEU 213 B LEU 214 n 14 LEU 214 B LYS 215 n 15 LYS 215 B LYS 216 n 16 LYS 216 B ALA 217 n 17 ALA 217 B ALA 218 n 18 ALA 218 B GLY 219 n 19 GLY 219 B ILE 220 n 20 ILE 220 B GLU 221 n 21 GLU 221 B SER 222 n 22 SER 222 B GLY 223 n 23 GLY 223 B SER 224 n 24 SER 224 B GLY 225 n 25 GLY 225 B GLU 226 n 26 GLU 226 B PRO 227 n 27 PRO 227 B ASN 228 n 28 ASN 228 B ARG 229 n 29 ARG 229 B ASN 230 n 30 ASN 230 B LYS 231 n 31 LYS 231 B VAL 232 n 32 VAL 232 B ALA 233 n 33 ALA 233 B THR 234 n 34 THR 234 B ILE 235 n 35 ILE 235 B LYS 236 n 36 LYS 236 B ARG 237 n 37 ARG 237 B ASP 238 n 38 ASP 238 B LYS 239 n 39 LYS 239 B VAL 240 n 40 VAL 240 B ARG 241 n 41 ARG 241 B GLU 242 n 42 GLU 242 B ILE 243 n 43 ILE 243 B ALA 244 n 44 ALA 244 B GLU 245 n 45 GLU 245 B LEU 246 n 46 LEU 246 B LYS 247 n 47 LYS 247 B MET 248 n 48 MET 248 B PRO 249 n 49 PRO 249 B ASP 250 n 50 ASP 250 B LEU 251 n 51 LEU 251 B ASN 252 n 52 ASN 252 B ALA 253 n 53 ALA 253 B ALA 254 n 54 ALA 254 B SER 255 n 55 SER 255 B ILE 256 n 56 ILE 256 B GLU 257 n 57 GLU 257 B ALA 258 n 58 ALA 258 B ALA 259 n 59 ALA 259 B MET 260 n 60 MET 260 B ARG 261 n 61 ARG 261 B MET 262 n 62 MET 262 B ILE 263 n 63 ILE 263 B GLU 264 n 64 GLU 264 B GLY 265 n 65 GLY 265 B THR 266 n 66 THR 266 B ALA 267 n 67 ALA 267 B ARG 268 n 68 ARG 268 B SER 269 n 69 SER 269 B MET 270 n 70 MET 270 B GLY 271 n 71 GLY 271 B ILE 272 n 72 ILE 272 B VAL 273 n 73 VAL 273 B VAL 274 n 74 VAL 274 B GLU 275 n 75 GLU 275 B n 76 276 B GTP 101 n 1 GTP 101 C C 102 n 2 C 102 C C 103 n 3 C 103 C A 104 n 4 A 104 C G 105 n 5 G 105 C G 106 n 6 G 106 C A 107 n 7 A 107 C U 108 n 8 U 108 C G 109 n 9 G 109 C U 110 n 10 U 110 C A 111 n 11 A 111 C G 112 n 12 G 112 C G 113 n 13 G 113 C C 114 n 14 C 114 C U 115 n 15 U 115 C U 116 n 16 U 116 C A 117 n 17 A 117 C G 118 n 18 G 118 C A 119 n 19 A 119 C A 120 n 20 A 120 C G 121 n 21 G 121 C C 122 n 22 C 122 C A 123 n 23 A 123 C G 124 n 24 G 124 C C 125 n 25 C 125 C C 126 n 26 C 126 C A 127 n 27 A 127 C U 128 n 28 U 128 C C 129 n 29 C 129 C A 130 n 30 A 130 C U 131 n 31 U 131 C U 132 n 32 U 132 C U 133 n 33 U 133 C A 134 n 34 A 134 C A 135 n 35 A 135 C A 136 n 36 A 136 C G 137 n 37 G 137 C A 138 n 38 A 138 C A 139 n 39 A 139 C A 140 n 40 A 140 C G 141 n 41 G 141 C C 142 n 42 C 142 C G 143 n 43 G 143 C U 144 n 44 U 144 C A 145 n 45 A 145 C A 146 n 46 A 146 C U 147 n 47 U 147 C A 148 n 48 A 148 C G 149 n 49 G 149 C C 150 n 50 C 150 C U 151 n 51 U 151 C C 152 n 52 C 152 C A 153 n 53 A 153 C C 154 n 54 C 154 C U 155 n 55 U 155 C G 156 n 56 G 156 C G 157 n 57 G 157 C U 158 n 58 U 158 C GTP 301 n 1 GTP 301 D C 302 n 2 C 302 D C 303 n 3 C 303 D A 304 n 4 A 304 D G 305 n 5 G 305 D G 306 n 6 G 306 D A 307 n 7 A 307 D U 308 n 8 U 308 D G 309 n 9 G 309 D U 310 n 10 U 310 D A 311 n 11 A 311 D G 312 n 12 G 312 D G 313 n 13 G 313 D C 314 n 14 C 314 D U 315 n 15 U 315 D U 316 n 16 U 316 D A 317 n 17 A 317 D G 318 n 18 G 318 D A 319 n 19 A 319 D A 320 n 20 A 320 D G 321 n 21 G 321 D C 322 n 22 C 322 D A 323 n 23 A 323 D G 324 n 24 G 324 D C 325 n 25 C 325 D C 326 n 26 C 326 D A 327 n 27 A 327 D U 328 n 28 U 328 D C 329 n 29 C 329 D A 330 n 30 A 330 D U 331 n 31 U 331 D U 332 n 32 U 332 D U 333 n 33 U 333 D A 334 n 34 A 334 D A 335 n 35 A 335 D A 336 n 36 A 336 D G 337 n 37 G 337 D A 338 n 38 A 338 D A 339 n 39 A 339 D A 340 n 40 A 340 D G 341 n 41 G 341 D C 342 n 42 C 342 D G 343 n 43 G 343 D U 344 n 44 U 344 D A 345 n 45 A 345 D A 346 n 46 A 346 D U 347 n 47 U 347 D A 348 n 48 A 348 D G 349 n 49 G 349 D C 350 n 50 C 350 D U 351 n 51 U 351 D C 352 n 52 C 352 D A 353 n 53 A 353 D C 354 n 54 C 354 D U 355 n 55 U 355 D G 356 n 56 G 356 D G 357 n 57 G 357 D U 358 n 58 U 358 D author_and_software_defined_assembly PQS 2 dimeric author_and_software_defined_assembly PQS 2 dimeric C A 119 C O3' A 19 1_555 C K 1162 H K K 1_555 C A 120 C OP2 A 20 1_555 46.2 C A 119 C O3' A 19 1_555 C K 1162 H K K 1_555 C C 122 C OP1 C 22 1_555 110.9 C A 120 C OP2 A 20 1_555 C K 1162 H K K 1_555 C C 122 C OP1 C 22 1_555 64.9 C A 119 C O3' A 19 1_555 C K 1162 H K K 1_555 C C 122 C OP2 C 22 1_555 106.3 C A 120 C OP2 A 20 1_555 C K 1162 H K K 1_555 C C 122 C OP2 C 22 1_555 83.1 C C 122 C OP1 C 22 1_555 C K 1162 H K K 1_555 C C 122 C OP2 C 22 1_555 53.8 C A 119 C O3' A 19 1_555 C K 1162 H K K 1_555 C C 122 C O5' C 22 1_555 150.5 C A 120 C OP2 A 20 1_555 C K 1162 H K K 1_555 C C 122 C O5' C 22 1_555 110.6 C C 122 C OP1 C 22 1_555 C K 1162 H K K 1_555 C C 122 C O5' C 22 1_555 48.1 C C 122 C OP2 C 22 1_555 C K 1162 H K K 1_555 C C 122 C O5' C 22 1_555 46.0 C A 119 C O3' A 19 1_555 C K 1162 H K K 1_555 C A 123 C OP1 A 23 1_555 141.8 C A 120 C OP2 A 20 1_555 C K 1162 H K K 1_555 C A 123 C OP1 A 23 1_555 147.7 C C 122 C OP1 C 22 1_555 C K 1162 H K K 1_555 C A 123 C OP1 A 23 1_555 98.8 C C 122 C OP2 C 22 1_555 C K 1162 H K K 1_555 C A 123 C OP1 A 23 1_555 110.6 C C 122 C O5' C 22 1_555 C K 1162 H K K 1_555 C A 123 C OP1 A 23 1_555 67.7 C A 120 C OP2 A 20 1_555 C MG 1163 I MG MG 1_555 C C 122 C OP1 C 22 1_555 80.2 C U 116 C OP1 U 16 1_555 C MG 1165 K MG MG 1_555 D A 336 D OP1 A 36 1_555 79.4 C GTP 101 C O3B GTP 1 1_555 C MG 1166 L MG MG 1_555 D U 358 D O4 U 58 7_556 111.8 C GTP 101 C O3B GTP 1 1_555 C MG 1166 L MG MG 1_555 C GTP 101 C O1B GTP 1 1_555 53.5 D U 358 D O4 U 58 7_556 C MG 1166 L MG MG 1_555 C GTP 101 C O1B GTP 1 1_555 62.2 C A 123 C OP2 A 23 1_555 C MG 1167 M MG MG 1_555 C U 144 C O4 U 44 1_555 169.7 D C 322 D OP1 C 22 1_555 D K 1362 U K K 1_555 D A 323 D OP1 A 23 1_555 95.1 D C 322 D OP1 C 22 1_555 D K 1362 U K K 1_555 D C 322 D O5' C 22 1_555 45.3 D A 323 D OP1 A 23 1_555 D K 1362 U K K 1_555 D C 322 D O5' C 22 1_555 64.7 D C 322 D OP1 C 22 1_555 D K 1362 U K K 1_555 D C 322 D OP2 C 22 1_555 47.9 D A 323 D OP1 A 23 1_555 D K 1362 U K K 1_555 D C 322 D OP2 C 22 1_555 105.3 D C 322 D O5' C 22 1_555 D K 1362 U K K 1_555 D C 322 D OP2 C 22 1_555 42.5 D C 322 D OP1 C 22 1_555 D K 1362 U K K 1_555 D A 320 D OP2 A 20 1_555 56.5 D A 323 D OP1 A 23 1_555 D K 1362 U K K 1_555 D A 320 D OP2 A 20 1_555 142.0 D C 322 D O5' C 22 1_555 D K 1362 U K K 1_555 D A 320 D OP2 A 20 1_555 100.0 D C 322 D OP2 C 22 1_555 D K 1362 U K K 1_555 D A 320 D OP2 A 20 1_555 75.5 D C 322 D OP1 C 22 1_555 D K 1362 U K K 1_555 D A 319 D O3' A 19 1_555 105.2 D A 323 D OP1 A 23 1_555 D K 1362 U K K 1_555 D A 319 D O3' A 19 1_555 152.9 D C 322 D O5' C 22 1_555 D K 1362 U K K 1_555 D A 319 D O3' A 19 1_555 142.1 D C 322 D OP2 C 22 1_555 D K 1362 U K K 1_555 D A 319 D O3' A 19 1_555 101.6 D A 320 D OP2 A 20 1_555 D K 1362 U K K 1_555 D A 319 D O3' A 19 1_555 49.5 D A 320 D OP2 A 20 1_555 D MG 1363 V MG MG 1_555 D C 322 D OP1 C 22 1_555 68.6 C GTP 101 C O2B GTP 1 7_556 D MG 1364 W MG MG 1_555 C GTP 101 C N7 GTP 1 7_556 96.6 C GTP 101 C O2B GTP 1 7_556 D MG 1364 W MG MG 1_555 D GTP 301 D O1B GTP 1 1_555 141.6 C GTP 101 C N7 GTP 1 7_556 D MG 1364 W MG MG 1_555 D GTP 301 D O1B GTP 1 1_555 121.5 C U 158 C O4 U 58 7_556 D MG 1366 Y MG MG 1_555 D GTP 301 D O1G GTP 1 1_555 98.6 D U 344 D O4 U 44 1_555 D MG 1367 Z MG MG 1_555 D A 323 D OP2 A 23 1_555 156.3 D G 313 D OP2 G 13 1_555 D MG 1372 EA MG MG 1_555 D A 320 D OP1 A 20 1_555 147.6 D G 313 D OP2 G 13 1_555 D MG 1372 EA MG MG 1_555 D G 313 D N7 G 13 1_555 93.8 D A 320 D OP1 A 20 1_555 D MG 1372 EA MG MG 1_555 D G 313 D N7 G 13 1_555 111.7 C GTP 101 GUANOSINE-5'-TRIPHOSPHATE C GTP 1 G D GTP 301 GUANOSINE-5'-TRIPHOSPHATE D GTP 1 G 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 35 A N ILE 35 A O VAL 73 A O VAL 73 B N ILE 235 B N ILE 35 B O VAL 273 B O VAL 73 1 A OG1 THR 2 A OG1 THR 2 1 Y 1 A CG2 THR 2 A CG2 THR 2 1 Y 1 A PHE 1 A PHE 1 1 Y 1 A ASN 76 A ASN 76 1 Y 1 B PHE 201 B PHE 1 1 Y 1 B THR 202 B THR 2 1 Y 1 B PHE 203 B PHE 3 1 Y 1 B ILE 204 B ILE 4 1 Y 1 B THR 205 B THR 5 1 Y 1 B ASN 276 B ASN 76 1 Y 1 C A 119 0.072 SIDE CHAIN 1 C A 136 0.056 SIDE CHAIN 1 C G 137 0.058 SIDE CHAIN 1 C U 147 0.070 SIDE CHAIN 1 D U 328 0.068 SIDE CHAIN 1 D U 344 0.064 SIDE CHAIN 1 D A 345 0.061 SIDE CHAIN 1 D U 347 0.076 SIDE CHAIN 1 A ALA 33 -176.27 143.61 1 A SER 55 178.29 159.66 1 B ALA 233 175.14 161.98 1 B ARG 237 -49.76 -11.52 PROTEIN.PARAM PROTEIN.TOP DNA-RNA.PARAM DNA-RNA.TOP WATER.PARAM WATER.TOP ION.PARAM ION.TOP 0.253 0.217 0.217 2.80 20.00 1373 17542 7.80 94.5 RANDOM 10000 1 THROUGHOUT 0.000 MAD MAXIMUM LIKELIHOOD USING AMPLITUDES CNS 2.80 20.00 13 3607 27 2504 1063 0.006 1.030 0.425 0.368 2.84 48 525 27 7.8 88.7 75.50 2.800 20.000 1HC8 17542 0.000 0.24000 1 5.9000 5.000 94.5 0.27000 2.80 2.93 1 4.00 88.7 refinement CNS 0.9 data reduction DENZO data scaling SCALEPACK phasing MLPHARE RIBOSOMAL PROTEIN L11 CRYSTAL STRUCTURE OF A CONSERVED RIBOSOMAL PROTEIN-RNA COMPLEX 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N 3 N N 4 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 5 N N 5 N N 3 N N 3 N N 3 N N 3 N N 4 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 3 N N 5 N N 5 N N 3 N N 6 N N 6 N N 6 N N 6 N N COMPLEX OF THE RIBOSOMAL PROTEIN L11 AND THERIBOSOMAL 23S RNA FRAGMENT A ALA 10 A ALA 10 HELX_P A ALA 17 A ALA 17 1 1 8 A ARG 37 A ARG 37 HELX_P A MET 48 A MET 48 1 2 12 A GLU 57 A GLU 57 HELX_P A SER 69 A SER 69 1 4 13 B ALA 210 B ALA 10 HELX_P B ALA 217 B ALA 17 1 5 8 B ARG 237 B ARG 37 HELX_P B MET 248 B MET 48 1 6 12 B GLU 257 B GLU 57 HELX_P B SER 269 B SER 69 1 8 13 covale 1.608 C GTP 101 C O3' GTP 1 1_555 C C 102 C P C 2 1_555 metalc 2.214 C MG 1161 G MG MG 1_555 C A 148 C OP1 A 48 1_555 metalc 3.353 C K 1162 H K K 1_555 C A 119 C O3' A 19 1_555 metalc 2.823 C K 1162 H K K 1_555 C A 120 C OP2 A 20 1_555 metalc 2.632 C K 1162 H K K 1_555 C C 122 C OP1 C 22 1_555 metalc 2.976 C K 1162 H K K 1_555 C C 122 C OP2 C 22 1_555 metalc 3.323 C K 1162 H K K 1_555 C C 122 C O5' C 22 1_555 metalc 2.714 C K 1162 H K K 1_555 C A 123 C OP1 A 23 1_555 metalc 2.379 C MG 1163 I MG MG 1_555 C A 120 C OP2 A 20 1_555 metalc 2.168 C MG 1163 I MG MG 1_555 C C 122 C OP1 C 22 1_555 metalc 2.458 C MG 1164 J MG MG 1_555 C HOH 2001 HA O HOH 1_555 metalc 2.183 C MG 1165 K MG MG 1_555 C U 116 C OP1 U 16 1_555 metalc 2.324 C MG 1165 K MG MG 1_555 D A 336 D OP1 A 36 1_555 metalc 2.867 C MG 1166 L MG MG 1_555 C GTP 101 C O3B GTP 1 1_555 metalc 2.559 C MG 1166 L MG MG 1_555 D U 358 D O4 U 58 7_556 metalc 2.810 C MG 1166 L MG MG 1_555 C GTP 101 C O1B GTP 1 1_555 metalc 2.119 C MG 1167 M MG MG 1_555 C A 123 C OP2 A 23 1_555 metalc 2.006 C MG 1167 M MG MG 1_555 C U 144 C O4 U 44 1_555 covale 1.602 D GTP 301 D O3' GTP 1 1_555 D C 302 D P C 2 1_555 metalc 2.197 D MG 1361 T MG MG 1_555 D A 348 D OP1 A 48 1_555 metalc 2.920 D K 1362 U K K 1_555 D C 322 D OP1 C 22 1_555 metalc 2.769 D K 1362 U K K 1_555 D A 323 D OP1 A 23 1_555 metalc 3.460 D K 1362 U K K 1_555 D C 322 D O5' C 22 1_555 metalc 3.337 D K 1362 U K K 1_555 D C 322 D OP2 C 22 1_555 metalc 2.744 D K 1362 U K K 1_555 D A 320 D OP2 A 20 1_555 metalc 3.169 D K 1362 U K K 1_555 D A 319 D O3' A 19 1_555 metalc 2.390 D MG 1363 V MG MG 1_555 D A 320 D OP2 A 20 1_555 metalc 2.380 D MG 1363 V MG MG 1_555 D C 322 D OP1 C 22 1_555 metalc 2.793 D MG 1364 W MG MG 1_555 C GTP 101 C O2B GTP 1 7_556 metalc 2.988 D MG 1364 W MG MG 1_555 C GTP 101 C N7 GTP 1 7_556 metalc 2.356 D MG 1364 W MG MG 1_555 D GTP 301 D O1B GTP 1 1_555 metalc 2.189 D MG 1365 X MG MG 1_555 D A 311 D OP2 A 11 1_555 metalc 2.487 D MG 1366 Y MG MG 1_555 C U 158 C O4 U 58 7_556 metalc 2.119 D MG 1366 Y MG MG 1_555 D GTP 301 D O1G GTP 1 1_555 metalc 1.910 D MG 1367 Z MG MG 1_555 D U 344 D O4 U 44 1_555 metalc 2.229 D MG 1367 Z MG MG 1_555 D A 323 D OP2 A 23 1_555 metalc 2.731 D MG 1372 EA MG MG 1_555 D G 313 D OP2 G 13 1_555 metalc 2.999 D MG 1372 EA MG MG 1_555 D A 320 D OP1 A 20 1_555 metalc 3.094 D MG 1372 EA MG MG 1_555 D G 313 D N7 G 13 1_555 hydrog TYPE_28_PAIR C GTP 101 C N1 GTP 1 1_555 C U 158 C O2 U 58 1_555 hydrog TYPE_28_PAIR C GTP 101 C O6 GTP 1 1_555 C U 158 C N3 U 58 1_555 hydrog WATSON-CRICK C C 102 C N3 C 2 1_555 C G 157 C N1 G 57 1_555 hydrog WATSON-CRICK C C 102 C N4 C 2 1_555 C G 157 C O6 G 57 1_555 hydrog WATSON-CRICK C C 102 C O2 C 2 1_555 C G 157 C N2 G 57 1_555 hydrog WATSON-CRICK C C 103 C N3 C 3 1_555 C G 156 C N1 G 56 1_555 hydrog WATSON-CRICK C C 103 C N4 C 3 1_555 C G 156 C O6 G 56 1_555 hydrog WATSON-CRICK C C 103 C O2 C 3 1_555 C G 156 C N2 G 56 1_555 hydrog WATSON-CRICK C A 104 C N1 A 4 1_555 C U 155 C N3 U 55 1_555 hydrog WATSON-CRICK C A 104 C N6 A 4 1_555 C U 155 C O4 U 55 1_555 hydrog G-A MISPAIR C G 105 C N2 G 5 1_555 C A 135 C N3 A 35 1_555 hydrog WATSON-CRICK C G 105 C N1 G 5 1_555 C C 154 C N3 C 54 1_555 hydrog WATSON-CRICK C G 105 C N2 G 5 1_555 C C 154 C O2 C 54 1_555 hydrog WATSON-CRICK C G 105 C O6 G 5 1_555 C C 154 C N4 C 54 1_555 hydrog TYPE_11_PAIR C G 106 C N2 G 6 1_555 C A 153 C N7 A 53 1_555 hydrog TYPE_11_PAIR C G 106 C N3 G 6 1_555 C A 153 C N6 A 53 1_555 hydrog WATSON-CRICK C A 107 C N1 A 7 1_555 C U 131 C N3 U 31 1_555 hydrog WATSON-CRICK C A 107 C N6 A 7 1_555 C U 131 C O4 U 31 1_555 hydrog WATSON-CRICK C U 108 C N3 U 8 1_555 C A 130 C N1 A 30 1_555 hydrog WATSON-CRICK C U 108 C O4 U 8 1_555 C A 130 C N6 A 30 1_555 hydrog WATSON-CRICK C G 109 C N1 G 9 1_555 C C 129 C N3 C 29 1_555 hydrog WATSON-CRICK C G 109 C N2 G 9 1_555 C C 129 C O2 C 29 1_555 hydrog WATSON-CRICK C G 109 C O6 G 9 1_555 C C 129 C N4 C 29 1_555 hydrog HOOGSTEEN C U 110 C N3 U 10 1_555 C A 138 C N7 A 38 1_555 hydrog HOOGSTEEN C U 110 C O4 U 10 1_555 C A 138 C N6 A 38 1_555 hydrog WATSON-CRICK C G 112 C N1 G 12 1_555 C C 126 C N3 C 26 1_555 hydrog WATSON-CRICK C G 112 C N2 G 12 1_555 C C 126 C O2 C 26 1_555 hydrog WATSON-CRICK C G 112 C O6 G 12 1_555 C C 126 C N4 C 26 1_555 hydrog WATSON-CRICK C G 113 C N1 G 13 1_555 C C 125 C N3 C 25 1_555 hydrog WATSON-CRICK C G 113 C N2 G 13 1_555 C C 125 C O2 C 25 1_555 hydrog WATSON-CRICK C G 113 C O6 G 13 1_555 C C 125 C N4 C 25 1_555 hydrog WATSON-CRICK C C 114 C N3 C 14 1_555 C G 124 C N1 G 24 1_555 hydrog WATSON-CRICK C C 114 C N4 C 14 1_555 C G 124 C O6 G 24 1_555 hydrog WATSON-CRICK C C 114 C O2 C 14 1_555 C G 124 C N2 G 24 1_555 hydrog U-A PAIR C U 115 C O2 U 15 1_555 C A 123 C N6 A 23 1_555 hydrog TYPE_6_PAIR C G 121 C N1 G 21 1_555 C G 141 C O6 G 41 1_555 hydrog TYPE_6_PAIR C G 121 C N2 G 21 1_555 C G 141 C N7 G 41 1_555 hydrog G-C PAIR C G 121 C O6 G 21 1_555 C C 150 C N4 C 50 1_555 hydrog C-C MISPAIR C C 122 C N3 C 22 1_555 C C 142 C N4 C 42 1_555 hydrog C-G PAIR C C 122 C N4 C 22 1_555 C G 149 C O6 G 49 1_555 hydrog REVERSED WATSON-CRICK C U 132 C N3 U 32 1_555 C A 136 C N1 A 36 1_555 hydrog REVERSED WATSON-CRICK C U 132 C O2 U 32 1_555 C A 136 C N6 A 36 1_555 hydrog WATSON-CRICK C G 137 C N1 G 37 1_555 C C 152 C N3 C 52 1_555 hydrog WATSON-CRICK C G 137 C N2 G 37 1_555 C C 152 C O2 C 52 1_555 hydrog WATSON-CRICK C G 137 C O6 G 37 1_555 C C 152 C N4 C 52 1_555 hydrog WATSON-CRICK C A 140 C N1 A 40 1_555 C U 151 C N3 U 51 1_555 hydrog WATSON-CRICK C A 140 C N6 A 40 1_555 C U 151 C O4 U 51 1_555 hydrog WATSON-CRICK C G 141 C N1 G 41 1_555 C C 150 C N3 C 50 1_555 hydrog WATSON-CRICK C G 141 C N2 G 41 1_555 C C 150 C O2 C 50 1_555 hydrog WATSON-CRICK C G 141 C O6 G 41 1_555 C C 150 C N4 C 50 1_555 hydrog WATSON-CRICK C C 142 C N3 C 42 1_555 C G 149 C N1 G 49 1_555 hydrog WATSON-CRICK C C 142 C N4 C 42 1_555 C G 149 C O6 G 49 1_555 hydrog WATSON-CRICK C C 142 C O2 C 42 1_555 C G 149 C N2 G 49 1_555 hydrog TYPE_11_PAIR C G 143 C N2 G 43 1_555 C A 148 C N7 A 48 1_555 hydrog TYPE_11_PAIR C G 143 C N3 G 43 1_555 C A 148 C N6 A 48 1_555 hydrog TYPE_28_PAIR D GTP 301 D N1 GTP 1 1_555 D U 358 D O2 U 58 1_555 hydrog TYPE_28_PAIR D GTP 301 D O6 GTP 1 1_555 D U 358 D N3 U 58 1_555 hydrog WATSON-CRICK D C 302 D N3 C 2 1_555 D G 357 D N1 G 57 1_555 hydrog WATSON-CRICK D C 302 D N4 C 2 1_555 D G 357 D O6 G 57 1_555 hydrog WATSON-CRICK D C 302 D O2 C 2 1_555 D G 357 D N2 G 57 1_555 hydrog WATSON-CRICK D C 303 D N3 C 3 1_555 D G 356 D N1 G 56 1_555 hydrog WATSON-CRICK D C 303 D N4 C 3 1_555 D G 356 D O6 G 56 1_555 hydrog WATSON-CRICK D C 303 D O2 C 3 1_555 D G 356 D N2 G 56 1_555 hydrog WATSON-CRICK D A 304 D N1 A 4 1_555 D U 355 D N3 U 55 1_555 hydrog WATSON-CRICK D A 304 D N6 A 4 1_555 D U 355 D O4 U 55 1_555 hydrog G-A MISPAIR D G 305 D N2 G 5 1_555 D A 335 D N3 A 35 1_555 hydrog WATSON-CRICK D G 305 D N1 G 5 1_555 D C 354 D N3 C 54 1_555 hydrog WATSON-CRICK D G 305 D N2 G 5 1_555 D C 354 D O2 C 54 1_555 hydrog WATSON-CRICK D G 305 D O6 G 5 1_555 D C 354 D N4 C 54 1_555 hydrog TYPE_11_PAIR D G 306 D N2 G 6 1_555 D A 353 D N7 A 53 1_555 hydrog TYPE_11_PAIR D G 306 D N3 G 6 1_555 D A 353 D N6 A 53 1_555 hydrog WATSON-CRICK D A 307 D N1 A 7 1_555 D U 331 D N3 U 31 1_555 hydrog WATSON-CRICK D A 307 D N6 A 7 1_555 D U 331 D O4 U 31 1_555 hydrog WATSON-CRICK D U 308 D N3 U 8 1_555 D A 330 D N1 A 30 1_555 hydrog WATSON-CRICK D U 308 D O4 U 8 1_555 D A 330 D N6 A 30 1_555 hydrog WATSON-CRICK D G 309 D N1 G 9 1_555 D C 329 D N3 C 29 1_555 hydrog WATSON-CRICK D G 309 D N2 G 9 1_555 D C 329 D O2 C 29 1_555 hydrog WATSON-CRICK D G 309 D O6 G 9 1_555 D C 329 D N4 C 29 1_555 hydrog HOOGSTEEN D U 310 D N3 U 10 1_555 D A 338 D N7 A 38 1_555 hydrog HOOGSTEEN D U 310 D O4 U 10 1_555 D A 338 D N6 A 38 1_555 hydrog WATSON-CRICK D G 312 D N1 G 12 1_555 D C 326 D N3 C 26 1_555 hydrog WATSON-CRICK D G 312 D N2 G 12 1_555 D C 326 D O2 C 26 1_555 hydrog WATSON-CRICK D G 312 D O6 G 12 1_555 D C 326 D N4 C 26 1_555 hydrog WATSON-CRICK D G 313 D N1 G 13 1_555 D C 325 D N3 C 25 1_555 hydrog WATSON-CRICK D G 313 D N2 G 13 1_555 D C 325 D O2 C 25 1_555 hydrog WATSON-CRICK D G 313 D O6 G 13 1_555 D C 325 D N4 C 25 1_555 hydrog WATSON-CRICK D C 314 D N3 C 14 1_555 D G 324 D N1 G 24 1_555 hydrog WATSON-CRICK D C 314 D N4 C 14 1_555 D G 324 D O6 G 24 1_555 hydrog WATSON-CRICK D C 314 D O2 C 14 1_555 D G 324 D N2 G 24 1_555 hydrog U-A PAIR D U 315 D O2 U 15 1_555 D A 323 D N6 A 23 1_555 hydrog TYPE_6_PAIR D G 321 D N1 G 21 1_555 D G 341 D O6 G 41 1_555 hydrog TYPE_6_PAIR D G 321 D N2 G 21 1_555 D G 341 D N7 G 41 1_555 hydrog G-C PAIR D G 321 D O6 G 21 1_555 D C 350 D N4 C 50 1_555 hydrog C-C MISPAIR D C 322 D N3 C 22 1_555 D C 342 D N4 C 42 1_555 hydrog C-G PAIR D C 322 D N4 C 22 1_555 D G 349 D O6 G 49 1_555 hydrog REVERSED WATSON-CRICK D U 332 D N3 U 32 1_555 D A 336 D N1 A 36 1_555 hydrog REVERSED WATSON-CRICK D U 332 D O2 U 32 1_555 D A 336 D N6 A 36 1_555 hydrog WATSON-CRICK D G 337 D N1 G 37 1_555 D C 352 D N3 C 52 1_555 hydrog WATSON-CRICK D G 337 D N2 G 37 1_555 D C 352 D O2 C 52 1_555 hydrog WATSON-CRICK D G 337 D O6 G 37 1_555 D C 352 D N4 C 52 1_555 hydrog WATSON-CRICK D A 340 D N1 A 40 1_555 D U 351 D N3 U 51 1_555 hydrog WATSON-CRICK D A 340 D N6 A 40 1_555 D U 351 D O4 U 51 1_555 hydrog WATSON-CRICK D G 341 D N1 G 41 1_555 D C 350 D N3 C 50 1_555 hydrog WATSON-CRICK D G 341 D N2 G 41 1_555 D C 350 D O2 C 50 1_555 hydrog WATSON-CRICK D G 341 D O6 G 41 1_555 D C 350 D N4 C 50 1_555 hydrog WATSON-CRICK D C 342 D N3 C 42 1_555 D G 349 D N1 G 49 1_555 hydrog WATSON-CRICK D C 342 D N4 C 42 1_555 D G 349 D O6 G 49 1_555 hydrog WATSON-CRICK D C 342 D O2 C 42 1_555 D G 349 D N2 G 49 1_555 hydrog TYPE_11_PAIR D G 343 D N2 G 43 1_555 D A 348 D N7 A 48 1_555 hydrog TYPE_11_PAIR D G 343 D N3 G 43 1_555 D A 348 D N6 A 48 1_555 RIBOSOME RIBOSOME, RIBOSOMAL RNA, TERTIARY STRUCTURE, RNA-PROTEIN given 0.043157 -0.998994 -0.012207 -0.392208 -0.005704 -0.919859 0.918863 0.044486 -0.392060 166.83000 180.47920 -58.80740 RL11_BACST UNP 1 P56210 1HC8 PDB 2 1HC8 58 133 1HC8 1 76 P56210 A 1 1 76 58 133 1HC8 201 276 P56210 B 1 1 76 101 158 1HC8 101 158 1HC8 C 2 1 58 301 358 1HC8 301 358 1HC8 D 2 1 58 2 2 parallel parallel A VAL 32 A VAL 32 A THR 34 A THR 34 A ILE 72 A ILE 72 A GLU 75 A GLU 75 B VAL 232 B VAL 32 B THR 234 B THR 34 B ILE 272 B ILE 72 B GLU 275 B GLU 75 BINDING SITE FOR RESIDUE MG C1159 Software 1 BINDING SITE FOR RESIDUE MG C1161 Software 1 BINDING SITE FOR RESIDUE K C1162 Software 4 BINDING SITE FOR RESIDUE MG C1163 Software 3 BINDING SITE FOR RESIDUE MG C1164 Software 2 BINDING SITE FOR RESIDUE MG C1165 Software 3 BINDING SITE FOR RESIDUE MG C1166 Software 2 BINDING SITE FOR RESIDUE MG C1167 Software 3 BINDING SITE FOR RESIDUE MG C1168 Software 1 BINDING SITE FOR RESIDUE OS C1169 Software 1 BINDING SITE FOR RESIDUE MG C1172 Software 1 BINDING SITE FOR RESIDUE MG D1360 Software 1 BINDING SITE FOR RESIDUE MG D1361 Software 2 BINDING SITE FOR RESIDUE K D1362 Software 4 BINDING SITE FOR RESIDUE MG D1363 Software 3 BINDING SITE FOR RESIDUE MG D1364 Software 2 BINDING SITE FOR RESIDUE MG D1365 Software 1 BINDING SITE FOR RESIDUE MG D1366 Software 2 BINDING SITE FOR RESIDUE MG D1367 Software 2 BINDING SITE FOR RESIDUE MG D1368 Software 1 BINDING SITE FOR RESIDUE MG D1372 Software 3 C U 108 C U 8 1 1_555 C A 148 C A 48 1 1_555 C A 119 C A 19 4 1_555 C A 120 C A 20 4 1_555 C C 122 C C 22 4 1_555 C A 123 C A 23 4 1_555 C A 120 C A 20 3 1_555 C G 121 C G 21 3 1_555 C C 122 C C 22 3 1_555 C C 152 C C 52 2 1_555 C HOH 2001 HA HOH 2 1_555 C U 115 C U 15 3 1_555 C U 116 C U 16 3 1_555 D A 336 D A 36 3 1_555 C GTP 101 C GTP 1 2 1_555 D U 358 D U 58 2 1_555 C A 123 C A 23 3 1_555 C G 143 C G 43 3 1_555 C U 144 C U 44 3 1_555 C A 111 C A 11 1 1_555 C G 137 C G 37 1 1_555 C G 113 C G 13 1 1_555 D G 321 D G 21 1 1_555 D G 321 D G 21 2 1_555 D A 348 D A 48 2 1_555 D A 319 D A 19 4 1_555 D A 320 D A 20 4 1_555 D C 322 D C 22 4 1_555 D A 323 D A 23 4 1_555 D G 313 D G 13 3 1_555 D A 320 D A 20 3 1_555 D C 322 D C 22 3 1_555 C GTP 101 C GTP 1 2 1_555 D GTP 301 D GTP 1 2 1_555 D A 311 D A 11 1 1_555 C U 158 C U 58 2 1_555 D GTP 301 D GTP 1 2 1_555 D A 323 D A 23 2 1_555 D U 344 D U 44 2 1_555 D G 306 D G 6 1 1_555 D G 312 D G 12 3 1_555 D G 313 D G 13 3 1_555 D A 320 D A 20 3 1_555 96 P 43 21 2