0.007622
0.000000
0.004225
0.000000
0.021978
0.000000
0.000000
0.000000
0.015684
0.00000
0.00000
0.00000
Kissinger, C.R.
Liu, B.
Martin-Blanco, E.
Kornberg, T.B.
Pabo, C.O.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
119.00
90.00
131.200
45.500
72.900
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
O
N
75
N
P
N
76
N
O
N
77
N
O
N
78
N
O
N
79
N
C
N
80
R
C
N
81
N
O
N
82
S
C
N
83
N
O
N
84
N
C
N
85
R
C
Y
86
N
N
Y
87
N
C
Y
88
N
N
Y
89
N
C
Y
90
N
C
N
91
N
N
Y
92
N
N
Y
93
N
C
Y
94
N
N
Y
95
N
C
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
O
N
111
N
P
N
112
N
O
N
113
N
O
N
114
N
O
N
115
N
C
N
116
R
C
N
117
N
O
N
118
S
C
N
119
N
O
N
120
N
C
N
121
R
C
N
122
N
N
N
123
N
C
N
124
N
O
N
125
N
N
N
126
N
C
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
P
N
146
N
O
N
147
N
O
N
148
N
O
N
149
N
C
N
150
R
C
N
151
N
O
N
152
S
C
N
153
N
O
N
154
N
C
N
155
R
C
Y
156
N
N
Y
157
N
C
Y
158
N
N
Y
159
N
C
N
160
N
C
N
161
N
O
N
162
N
N
N
163
N
C
N
164
N
N
N
165
N
N
Y
166
N
C
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
O
N
182
N
P
N
183
N
O
N
184
N
O
N
185
N
O
N
186
N
C
N
187
R
C
N
188
N
O
N
189
S
C
N
190
N
O
N
191
N
C
N
192
R
C
N
193
N
N
N
194
N
C
N
195
N
O
N
196
N
N
N
197
N
C
N
198
N
O
N
199
N
C
N
200
N
C
N
201
N
C
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
N
N
218
S
C
N
219
N
C
N
220
N
O
N
221
N
C
N
222
N
C
N
223
N
C
N
224
N
O
N
225
N
N
N
226
N
O
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
N
N
238
S
C
N
239
N
C
N
240
N
O
N
241
N
C
N
242
N
C
N
243
N
C
N
244
N
O
N
245
N
O
N
246
N
O
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
N
N
257
N
C
N
258
N
C
N
259
N
O
N
260
N
O
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
N
N
267
S
C
N
268
N
C
N
269
N
O
N
270
S
C
N
271
N
C
N
272
N
C
N
273
N
C
N
274
N
O
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
N
N
289
S
C
N
290
N
C
N
291
N
O
N
292
N
C
N
293
N
C
N
294
N
C
N
295
N
C
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
N
N
311
S
C
N
312
N
C
N
313
N
O
N
314
N
C
N
315
N
C
N
316
N
C
N
317
N
C
N
318
N
N
N
319
N
O
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
N
N
336
S
C
N
337
N
C
N
338
N
O
N
339
N
C
N
340
N
C
N
341
N
S
N
342
N
C
N
343
N
O
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
N
N
356
S
C
N
357
N
C
N
358
N
O
N
359
N
C
Y
360
N
C
Y
361
N
C
Y
362
N
C
Y
363
N
C
Y
364
N
C
Y
365
N
C
N
366
N
O
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
N
N
379
S
C
N
380
N
C
N
381
N
O
N
382
N
C
N
383
N
C
N
384
N
C
N
385
N
O
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
N
N
396
S
C
N
397
N
C
N
398
N
O
N
399
N
C
N
400
N
O
N
401
N
O
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
N
N
410
S
C
N
411
N
C
N
412
N
O
N
413
R
C
N
414
N
O
N
415
N
C
N
416
N
O
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
N
N
427
S
C
N
428
N
C
N
429
N
O
N
430
N
C
Y
431
N
C
Y
432
N
C
Y
433
N
C
Y
434
N
N
Y
435
N
C
Y
436
N
C
Y
437
N
C
Y
438
N
C
Y
439
N
C
N
440
N
O
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
N
N
454
S
C
N
455
N
C
N
456
N
O
N
457
N
C
Y
458
N
C
Y
459
N
C
Y
460
N
C
Y
461
N
C
Y
462
N
C
Y
463
N
C
N
464
N
O
N
465
N
O
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
Y
93
N
sing
Y
94
N
sing
Y
95
N
doub
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
doub
N
102
N
sing
N
103
N
sing
Y
104
N
sing
Y
105
N
doub
N
106
N
sing
Y
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
Y
166
N
sing
Y
167
N
sing
Y
168
N
doub
N
169
N
sing
Y
170
N
sing
N
171
N
sing
Y
172
N
doub
N
173
N
doub
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
doub
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
doub
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
doub
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
doub
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
doub
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
doub
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
doub
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
doub
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
doub
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
doub
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
doub
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
doub
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
Y
361
N
doub
Y
362
N
sing
Y
363
N
sing
N
364
N
sing
Y
365
N
doub
N
366
N
sing
Y
367
N
doub
N
368
N
sing
Y
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
doub
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
doub
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
doub
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
doub
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
Y
430
N
doub
Y
431
N
sing
Y
432
N
sing
N
433
N
sing
Y
434
N
doub
Y
435
N
sing
Y
436
N
sing
N
437
N
sing
Y
438
N
sing
Y
439
N
doub
N
440
N
sing
Y
441
N
doub
N
442
N
sing
Y
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
doub
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
Y
458
N
doub
Y
459
N
sing
Y
460
N
sing
N
461
N
sing
Y
462
N
doub
N
463
N
sing
Y
464
N
doub
N
465
N
sing
Y
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
US
Cell(Cambridge,Mass.)
CELLB5
0998
0092-8674
63
579
590
10.1016/0092-8674(90)90453-L
1977522
Crystal structure of an engrailed homeodomain-DNA complex at 2.8 A resolution: a framework for understanding homeodomain-DNA interactions.
1990
US
Biochem.Biophys.Res.Commun.
BBRCA9
0146
0006-291X
171
257
Crystallization and Preliminary X-Ray Diffraction Studies of the Engrailed Homeodomain and of an Engrailed Homeodomain Complex
1990
10.2210/pdb1hdd/pdb
pdb_00001hdd
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
AREA DETECTOR
XENTRONICS
SINGLE WAVELENGTH
M
x-ray
1
1.0
6387.157
DNA (5'-D(*TP*TP*TP*TP*GP*CP*CP*AP*TP*GP*TP*AP*AP*TP*TP*AP*C P*CP*TP*AP*A)-3')
1
syn
polymer
6494.248
DNA (5'-D(*AP*TP*TP*AP*GP*GP*TP*AP*AP*TP*TP*AP*CP*AP*TP*GP*G P*CP*AP*AP*A)-3')
1
syn
polymer
7469.551
PROTEIN (ENGRAILED HOMEODOMAIN)
2
man
polymer
no
no
(DT)(DT)(DT)(DT)(DG)(DC)(DC)(DA)(DT)(DG)(DT)(DA)(DA)(DT)(DT)(DA)(DC)(DC)(DT)(DA)
(DA)
TTTTGCCATGTAATTACCTAA
A
polydeoxyribonucleotide
no
no
(DA)(DT)(DT)(DA)(DG)(DG)(DT)(DA)(DA)(DT)(DT)(DA)(DC)(DA)(DT)(DG)(DG)(DC)(DA)(DA)
(DA)
ATTAGGTAATTACATGGCAAA
B
polydeoxyribonucleotide
no
no
MDEKRPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNKRAKIKKS
MDEKRPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKIWFQNKRAKIKKS
C,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
fruit fly
Drosophila
Escherichia
sample
7227
Drosophila melanogaster
562
Escherichia coli
3.37
63.48
VAPOR DIFFUSION
6.70
pH 6.70, VAPOR DIFFUSION
WATER
1
BIS-TRIS-PROPANE_HCL
1
NH4OH
1
3.074
1
A
2
B
42
11.385
A_DT2:DA42_B
1
-7.201
0.789
0.111
0.011
-9.982
1
20
A
3
B
41
-9.324
A_DT3:DA41_B
2
-1.371
-0.254
0.544
-0.170
-5.559
1
20
A
4
B
40
-0.606
A_DT4:DA40_B
3
-4.397
-0.517
-0.161
-0.161
-13.364
1
19
A
5
B
39
-5.463
A_DG5:DC39_B
4
-2.404
-0.670
0.040
-0.407
-7.699
1
19
A
6
B
38
-11.851
A_DC6:DG38_B
5
-6.386
-0.420
0.528
-0.446
-6.031
1
19
A
7
B
37
-0.834
A_DC7:DG37_B
6
-5.362
-0.935
0.090
-0.587
8.290
1
20
A
8
B
36
5.539
A_DA8:DT36_B
7
-3.633
-1.007
-0.022
-0.652
-3.061
1
20
A
9
B
35
2.759
A_DT9:DA35_B
8
-14.513
-1.113
0.200
-0.486
-6.078
1
19
A
10
B
34
-2.977
A_DG10:DC34_B
9
-9.878
-0.329
-0.565
-0.628
5.423
1
20
A
11
B
33
-0.257
A_DT11:DA33_B
10
-8.318
0.481
-0.240
-0.399
-2.860
1
20
A
12
B
32
-3.294
A_DA12:DT32_B
11
-16.520
-0.347
-0.350
-0.195
-1.515
1
20
A
13
B
31
9.736
A_DA13:DT31_B
12
-31.005
0.018
-0.070
-0.205
5.869
1
20
A
14
B
30
-0.345
A_DT14:DA30_B
13
-5.395
0.334
0.035
-0.310
1.840
1
20
A
15
B
29
1.874
A_DT15:DA29_B
14
-5.971
0.200
0.086
-0.148
8.492
1
20
A
16
B
28
-10.150
A_DA16:DT28_B
15
-12.100
0.005
0.406
0.074
17.997
1
19
A
17
B
27
-0.164
A_DC17:DG27_B
16
-21.777
0.097
-0.035
-0.167
-25.403
1
19
A
18
B
26
1.787
A_DC18:DG26_B
17
-9.106
-0.289
0.972
0.285
0.080
1
20
A
19
B
25
-18.322
A_DT19:DA25_B
18
-6.166
-0.618
-0.261
-0.126
-0.187
1
20
A
20
B
24
6.301
A_DA20:DT24_B
19
-10.107
0.620
-0.414
-0.396
-5.119
1
20
A
21
B
23
-1.094
A_DA21:DT23_B
20
-27.164
-0.832
-0.537
-0.303
3.651
36.164
A
A
2
3
9.813
B
B
42
41
3.695
6.064
0.046
0.031
AA_DT2DT3:DA41DA42_BB
1
0.656
-1.062
35.663
-0.916
0.031
2.998
30.118
A
A
3
4
5.524
B
B
41
40
3.079
2.839
0.235
-0.380
AA_DT3DT4:DA40DA41_BB
2
7.332
-14.267
29.097
-1.280
0.965
3.479
33.046
A
A
4
5
12.911
B
B
40
39
3.643
7.283
0.441
-0.450
AA_DT4DG5:DC39DA40_BB
3
1.741
-3.086
32.209
-2.151
-0.450
3.200
37.286
A
A
5
6
4.615
B
B
39
38
3.267
2.946
-0.019
-0.685
AA_DG5DC6:DG38DC39_BB
4
-2.481
3.887
37.094
-1.458
-0.296
3.342
24.362
A
A
6
7
-16.449
B
B
38
37
3.476
-6.831
0.483
0.111
AA_DC6DC7:DG37DG38_BB
5
3.194
-7.692
23.182
2.552
-0.075
3.038
41.654
A
A
7
8
3.358
B
B
37
36
2.959
2.385
0.297
1.271
AA_DC7DA8:DT36DG37_BB
6
3.224
-4.540
41.469
1.556
-0.104
3.443
35.466
A
A
8
9
13.177
B
B
36
35
3.683
7.923
-0.350
-0.725
AA_DA8DT9:DA35DT36_BB
7
-6.264
10.417
34.042
-2.483
-0.448
3.560
46.925
A
A
9
10
1.411
B
B
35
34
3.573
1.122
-0.253
1.434
AA_DT9DG10:DC34DA35_BB
8
5.068
-6.376
46.653
1.700
0.775
2.994
31.240
A
A
10
11
13.694
B
B
34
33
3.139
7.290
0.086
-0.117
AA_DG10DT11:DA33DC34_BB
9
-3.989
7.494
30.141
-1.537
-0.882
3.610
35.126
A
A
11
12
5.663
B
B
33
32
3.566
3.409
-0.359
0.452
AA_DT11DA12:DT32DA33_BB
10
-3.038
5.048
34.837
0.187
0.094
3.360
38.600
A
A
12
13
-2.269
B
B
32
31
3.347
-1.499
0.637
0.144
AA_DA12DA13:DT31DT32_BB
11
1.483
-2.244
38.544
0.407
-0.776
3.247
29.594
A
A
13
14
-1.820
B
B
31
30
3.224
-0.929
-0.159
-0.700
AA_DA13DT14:DA30DT31_BB
12
-2.147
4.207
29.503
-1.176
-0.138
3.279
33.383
A
A
14
15
7.409
B
B
30
29
3.394
4.242
0.043
-0.698
AA_DT14DT15:DA29DA30_BB
13
2.042
-3.566
33.059
-1.937
0.272
2.937
33.110
A
A
15
16
15.575
B
B
29
28
3.107
8.774
-0.338
-0.207
AA_DT15DA16:DT28DA29_BB
14
1.039
-1.845
31.941
-1.756
0.757
3.250
33.562
A
A
16
17
6.179
B
B
28
27
3.220
3.544
0.830
-0.464
AA_DA16DC17:DG27DT28_BB
15
5.936
-10.350
32.862
-1.385
-0.465
3.747
42.156
A
A
17
18
16.608
B
B
27
26
4.253
11.762
0.503
-0.902
AA_DC17DC18:DG26DG27_BB
16
-5.996
8.466
40.125
-2.776
-1.476
2.056
28.391
A
A
18
19
15.790
B
B
26
25
2.686
7.548
-1.359
-0.173
AA_DC18DT19:DA25DG26_BB
17
8.085
-16.914
26.189
-1.666
4.176
3.623
40.975
A
A
19
20
11.626
B
B
25
24
3.627
8.089
1.076
0.314
AA_DT19DA20:DT24DA25_BB
18
0.072
-0.104
40.202
-0.540
-1.529
3.406
22.390
A
A
20
21
11.916
B
B
24
23
3.553
4.592
-0.136
-0.283
AA_DA20DA21:DT23DT24_BB
19
1.454
-3.772
21.872
-2.566
0.932
database_2
struct_ref_seq_dif
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Source and taxonomy
Structure summary
Database references
Data collection
1
0
1992-01-15
1
1
2008-05-22
1
2
2011-07-13
1
3
2017-02-15
1
4
2022-12-21
1
5
2024-05-22
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
BNL
Y
BNL
1991-09-16
REL
32630
synthetic construct
sample
32630
synthetic construct
sample
T
1
n
1
DT
1
A
T
2
n
2
DT
2
A
T
3
n
3
DT
3
A
T
4
n
4
DT
4
A
G
5
n
5
DG
5
A
C
6
n
6
DC
6
A
C
7
n
7
DC
7
A
A
8
n
8
DA
8
A
T
9
n
9
DT
9
A
G
10
n
10
DG
10
A
T
11
n
11
DT
11
A
A
12
n
12
DA
12
A
A
13
n
13
DA
13
A
T
14
n
14
DT
14
A
T
15
n
15
DT
15
A
A
16
n
16
DA
16
A
C
17
n
17
DC
17
A
C
18
n
18
DC
18
A
T
19
n
19
DT
19
A
A
20
n
20
DA
20
A
A
21
n
21
DA
21
A
A
22
n
1
DA
22
B
T
23
n
2
DT
23
B
T
24
n
3
DT
24
B
A
25
n
4
DA
25
B
G
26
n
5
DG
26
B
G
27
n
6
DG
27
B
T
28
n
7
DT
28
B
A
29
n
8
DA
29
B
A
30
n
9
DA
30
B
T
31
n
10
DT
31
B
T
32
n
11
DT
32
B
A
33
n
12
DA
33
B
C
34
n
13
DC
34
B
A
35
n
14
DA
35
B
T
36
n
15
DT
36
B
G
37
n
16
DG
37
B
G
38
n
17
DG
38
B
C
39
n
18
DC
39
B
A
40
n
19
DA
40
B
A
41
n
20
DA
41
B
A
42
n
21
DA
42
B
n
1
-1
C
n
2
0
C
n
3
1
C
n
4
2
C
ARG
3
n
5
ARG
3
C
PRO
4
n
6
PRO
4
C
ARG
5
n
7
ARG
5
C
THR
6
n
8
THR
6
C
ALA
7
n
9
ALA
7
C
PHE
8
n
10
PHE
8
C
SER
9
n
11
SER
9
C
SER
10
n
12
SER
10
C
GLU
11
n
13
GLU
11
C
GLN
12
n
14
GLN
12
C
LEU
13
n
15
LEU
13
C
ALA
14
n
16
ALA
14
C
ARG
15
n
17
ARG
15
C
LEU
16
n
18
LEU
16
C
LYS
17
n
19
LYS
17
C
ARG
18
n
20
ARG
18
C
GLU
19
n
21
GLU
19
C
PHE
20
n
22
PHE
20
C
ASN
21
n
23
ASN
21
C
GLU
22
n
24
GLU
22
C
ASN
23
n
25
ASN
23
C
ARG
24
n
26
ARG
24
C
TYR
25
n
27
TYR
25
C
LEU
26
n
28
LEU
26
C
THR
27
n
29
THR
27
C
GLU
28
n
30
GLU
28
C
ARG
29
n
31
ARG
29
C
ARG
30
n
32
ARG
30
C
ARG
31
n
33
ARG
31
C
GLN
32
n
34
GLN
32
C
GLN
33
n
35
GLN
33
C
LEU
34
n
36
LEU
34
C
SER
35
n
37
SER
35
C
SER
36
n
38
SER
36
C
GLU
37
n
39
GLU
37
C
LEU
38
n
40
LEU
38
C
GLY
39
n
41
GLY
39
C
LEU
40
n
42
LEU
40
C
ASN
41
n
43
ASN
41
C
GLU
42
n
44
GLU
42
C
ALA
43
n
45
ALA
43
C
GLN
44
n
46
GLN
44
C
ILE
45
n
47
ILE
45
C
LYS
46
n
48
LYS
46
C
ILE
47
n
49
ILE
47
C
TRP
48
n
50
TRP
48
C
PHE
49
n
51
PHE
49
C
GLN
50
n
52
GLN
50
C
ASN
51
n
53
ASN
51
C
LYS
52
n
54
LYS
52
C
ARG
53
n
55
ARG
53
C
ALA
54
n
56
ALA
54
C
LYS
55
n
57
LYS
55
C
ILE
56
n
58
ILE
56
C
LYS
57
n
59
LYS
57
C
LYS
58
n
60
LYS
58
C
SER
59
n
61
SER
59
C
n
1
-1
D
n
2
0
D
n
3
1
D
n
4
2
D
ARG
3
n
5
ARG
3
D
PRO
4
n
6
PRO
4
D
ARG
5
n
7
ARG
5
D
THR
6
n
8
THR
6
D
ALA
7
n
9
ALA
7
D
PHE
8
n
10
PHE
8
D
SER
9
n
11
SER
9
D
SER
10
n
12
SER
10
D
GLU
11
n
13
GLU
11
D
GLN
12
n
14
GLN
12
D
LEU
13
n
15
LEU
13
D
ALA
14
n
16
ALA
14
D
ARG
15
n
17
ARG
15
D
LEU
16
n
18
LEU
16
D
LYS
17
n
19
LYS
17
D
ARG
18
n
20
ARG
18
D
GLU
19
n
21
GLU
19
D
PHE
20
n
22
PHE
20
D
ASN
21
n
23
ASN
21
D
GLU
22
n
24
GLU
22
D
ASN
23
n
25
ASN
23
D
ARG
24
n
26
ARG
24
D
TYR
25
n
27
TYR
25
D
LEU
26
n
28
LEU
26
D
THR
27
n
29
THR
27
D
GLU
28
n
30
GLU
28
D
ARG
29
n
31
ARG
29
D
ARG
30
n
32
ARG
30
D
ARG
31
n
33
ARG
31
D
GLN
32
n
34
GLN
32
D
GLN
33
n
35
GLN
33
D
LEU
34
n
36
LEU
34
D
SER
35
n
37
SER
35
D
SER
36
n
38
SER
36
D
GLU
37
n
39
GLU
37
D
LEU
38
n
40
LEU
38
D
GLY
39
n
41
GLY
39
D
LEU
40
n
42
LEU
40
D
ASN
41
n
43
ASN
41
D
GLU
42
n
44
GLU
42
D
ALA
43
n
45
ALA
43
D
GLN
44
n
46
GLN
44
D
ILE
45
n
47
ILE
45
D
LYS
46
n
48
LYS
46
D
ILE
47
n
49
ILE
47
D
TRP
48
n
50
TRP
48
D
PHE
49
n
51
PHE
49
D
GLN
50
n
52
GLN
50
D
ASN
51
n
53
ASN
51
D
LYS
52
n
54
LYS
52
D
ARG
53
n
55
ARG
53
D
ALA
54
n
56
ALA
54
D
LYS
55
n
57
LYS
55
D
ILE
56
n
58
ILE
56
D
LYS
57
n
59
LYS
57
D
LYS
58
n
60
LYS
58
D
SER
59
n
61
SER
59
D
author_defined_assembly
4
tetrameric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
C
CG
ARG
18
C
CG
ARG
20
1
Y
1
C
CD
ARG
18
C
CD
ARG
20
1
Y
1
C
NE
ARG
18
C
NE
ARG
20
1
Y
1
C
CZ
ARG
18
C
CZ
ARG
20
1
Y
1
C
NH1
ARG
18
C
NH1
ARG
20
1
Y
1
C
NH2
ARG
18
C
NH2
ARG
20
1
Y
1
D
CG
ARG
3
D
CG
ARG
5
1
Y
1
D
CD
ARG
3
D
CD
ARG
5
1
Y
1
D
NE
ARG
3
D
NE
ARG
5
1
Y
1
D
CZ
ARG
3
D
CZ
ARG
5
1
Y
1
D
NH1
ARG
3
D
NH1
ARG
5
1
Y
1
D
NH2
ARG
3
D
NH2
ARG
5
1
Y
1
D
CG
ARG
18
D
CG
ARG
20
1
Y
1
D
CD
ARG
18
D
CD
ARG
20
1
Y
1
D
NE
ARG
18
D
NE
ARG
20
1
Y
1
D
CZ
ARG
18
D
CZ
ARG
20
1
Y
1
D
NH1
ARG
18
D
NH1
ARG
20
1
Y
1
D
NH2
ARG
18
D
NH2
ARG
20
1
Y
1
C
MET
-1
C
MET
1
1
Y
1
C
ASP
0
C
ASP
2
1
Y
1
C
GLU
1
C
GLU
3
1
Y
1
C
LYS
2
C
LYS
4
1
Y
1
D
MET
-1
D
MET
1
1
Y
1
D
ASP
0
D
ASP
2
1
Y
1
D
GLU
1
D
GLU
3
1
Y
1
D
LYS
2
D
LYS
4
1
Y
1
-6.23
0.80
109.40
103.17
A
A
A
O5'
C5'
C4'
DT
DT
DT
2
2
2
N
1
-8.57
0.80
102.40
93.83
A
A
A
C3'
C2'
C1'
DT
DT
DT
3
3
3
N
1
5.67
0.30
108.30
113.97
A
A
A
O4'
C1'
N1
DT
DT
DT
3
3
3
N
1
-7.91
1.20
119.70
111.79
A
A
A
C3'
O3'
P
DT
DT
DT
3
3
4
Y
1
-5.34
0.80
102.40
97.06
A
A
A
C3'
C2'
C1'
DT
DT
DT
4
4
4
N
1
7.51
0.30
108.30
115.81
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
1
-8.57
1.00
110.10
101.53
A
A
A
C1'
O4'
C4'
DC
DC
DC
7
7
7
N
1
7.53
0.30
108.30
115.83
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
1
-10.61
1.20
119.70
109.09
A
A
A
C3'
O3'
P
DC
DC
DA
7
7
8
Y
1
-9.01
1.20
119.70
110.69
A
A
A
C3'
O3'
P
DA
DA
DT
8
8
9
Y
1
-13.59
1.60
120.90
107.31
A
A
A
P
O5'
C5'
DT
DT
DT
9
9
9
N
1
-6.91
1.00
110.10
103.19
A
A
A
C1'
O4'
C4'
DT
DT
DT
9
9
9
N
1
5.94
0.80
123.10
129.04
A
A
A
N1
C2
O2
DT
DT
DT
9
9
9
N
1
-4.45
0.60
122.30
117.85
A
A
A
N3
C2
O2
DT
DT
DT
9
9
9
N
1
4.02
0.60
119.00
123.02
A
A
A
C4
C5
C7
DT
DT
DT
9
9
9
N
1
-4.13
0.60
122.90
118.77
A
A
A
C6
C5
C7
DT
DT
DT
9
9
9
N
1
-5.17
0.80
109.40
104.23
A
A
A
O5'
C5'
C4'
DG
DG
DG
10
10
10
N
1
3.67
0.50
106.80
110.47
A
A
A
O4'
C1'
C2'
DG
DG
DG
10
10
10
N
1
2.31
0.30
108.30
110.61
A
A
A
O4'
C1'
N9
DG
DG
DG
10
10
10
N
1
10.66
1.20
119.70
130.36
A
A
A
C3'
O3'
P
DG
DG
DT
10
10
11
Y
1
-5.58
0.80
102.40
96.82
A
A
A
C3'
C2'
C1'
DT
DT
DT
11
11
11
N
1
-6.68
0.80
105.90
99.22
A
A
A
O4'
C1'
C2'
DT
DT
DT
11
11
11
N
1
3.93
0.60
119.00
122.93
A
A
A
C4
C5
C7
DT
DT
DT
11
11
11
N
1
-3.61
0.60
122.90
119.29
A
A
A
C6
C5
C7
DT
DT
DT
11
11
11
N
1
2.22
0.30
108.30
110.52
A
A
A
O4'
C1'
N9
DA
DA
DA
12
12
12
N
1
-5.89
0.70
102.20
96.31
A
A
A
C4'
C3'
C2'
DA
DA
DA
13
13
13
N
1
-4.94
0.80
102.40
97.46
A
A
A
C3'
C2'
C1'
DA
DA
DA
13
13
13
N
1
9.54
0.30
108.30
117.84
A
A
A
O4'
C1'
N9
DA
DA
DA
13
13
13
N
1
3.68
0.50
106.80
110.48
A
A
A
O4'
C1'
C2'
DT
DT
DT
14
14
14
N
1
5.32
0.30
108.30
113.62
A
A
A
O4'
C1'
N1
DT
DT
DT
14
14
14
N
1
4.12
0.30
108.30
112.42
A
A
A
O4'
C1'
N9
DA
DA
DA
16
16
16
N
1
5.74
0.30
108.30
114.04
A
A
A
O4'
C1'
N9
DA
DA
DA
21
21
21
N
1
2.33
0.30
108.30
110.63
B
B
B
O4'
C1'
N9
DA
DA
DA
22
22
22
N
1
5.66
0.30
108.30
113.96
B
B
B
O4'
C1'
N1
DT
DT
DT
23
23
23
N
1
5.37
0.30
108.30
113.67
B
B
B
O4'
C1'
N1
DT
DT
DT
24
24
24
N
1
-6.61
0.80
102.40
95.79
B
B
B
C3'
C2'
C1'
DA
DA
DA
25
25
25
N
1
5.72
0.30
108.30
114.02
B
B
B
O4'
C1'
N9
DA
DA
DA
25
25
25
N
1
-5.62
0.80
102.40
96.78
B
B
B
C3'
C2'
C1'
DG
DG
DG
26
26
26
N
1
11.15
0.30
108.30
119.45
B
B
B
O4'
C1'
N9
DG
DG
DG
26
26
26
N
1
-5.06
0.80
109.40
104.34
B
B
B
O5'
C5'
C4'
DG
DG
DG
27
27
27
N
1
-6.40
0.80
109.40
103.00
B
B
B
O5'
C5'
C4'
DT
DT
DT
28
28
28
N
1
-4.22
0.70
108.00
103.78
B
B
B
O4'
C1'
N1
DT
DT
DT
28
28
28
N
1
-10.68
1.60
120.90
110.22
B
B
B
P
O5'
C5'
DA
DA
DA
29
29
29
N
1
3.38
0.50
106.80
110.18
B
B
B
O4'
C1'
C2'
DT
DT
DT
31
31
31
N
1
3.48
0.50
121.30
124.78
B
B
B
C6
N1
C2
DT
DT
DT
31
31
31
N
1
-9.05
1.20
119.70
110.65
B
B
B
C3'
O3'
P
DT
DT
DT
31
31
32
Y
1
-5.31
0.80
102.40
97.09
B
B
B
C3'
C2'
C1'
DT
DT
DT
32
32
32
N
1
4.31
0.30
108.30
112.61
B
B
B
O4'
C1'
N1
DT
DT
DT
32
32
32
N
1
3.67
0.30
108.30
111.97
B
B
B
O4'
C1'
N9
DA
DA
DA
33
33
33
N
1
3.56
0.30
108.30
111.86
B
B
B
O4'
C1'
N1
DC
DC
DC
34
34
34
N
1
3.85
0.60
118.60
122.45
B
B
B
N1
C6
N6
DA
DA
DA
35
35
35
N
1
9.67
1.20
119.70
129.37
B
B
B
C3'
O3'
P
DA
DA
DT
35
35
36
Y
1
-8.42
0.70
108.00
99.58
B
B
B
O4'
C1'
N1
DT
DT
DT
36
36
36
N
1
4.35
0.60
126.00
130.35
B
B
B
N3
C4
N9
DG
DG
DG
37
37
37
N
1
-3.95
0.60
130.40
126.45
B
B
B
C6
C5
N7
DG
DG
DG
37
37
37
N
1
-11.18
1.60
120.90
109.72
B
B
B
P
O5'
C5'
DG
DG
DG
38
38
38
N
1
-8.75
0.80
102.40
93.65
B
B
B
C3'
C2'
C1'
DG
DG
DG
38
38
38
N
1
-4.84
0.80
105.90
101.06
B
B
B
O4'
C1'
C2'
DG
DG
DG
38
38
38
N
1
-16.89
1.60
120.90
104.01
B
B
B
P
O5'
C5'
DC
DC
DC
39
39
39
N
1
8.30
1.20
119.70
128.00
B
B
B
C3'
O3'
P
DC
DC
DA
39
39
40
Y
1
-5.34
0.80
109.40
104.06
B
B
B
O5'
C5'
C4'
DA
DA
DA
40
40
40
N
1
-10.42
1.60
120.90
110.48
B
B
B
P
O5'
C5'
DA
DA
DA
41
41
41
N
1
5.30
0.50
106.80
112.10
B
B
B
O4'
C1'
C2'
DA
DA
DA
41
41
41
N
1
9.58
1.40
114.30
123.88
B
B
B
N9
C1'
C2'
DA
DA
DA
41
41
41
N
1
1.96
0.30
108.30
110.26
B
B
B
O4'
C1'
N9
DA
DA
DA
41
41
41
N
1
-3.57
0.50
117.00
113.43
B
B
B
C4
C5
C6
DA
DA
DA
41
41
41
N
1
4.16
0.30
108.30
112.46
B
B
B
O4'
C1'
N9
DA
DA
DA
42
42
42
N
1
3.21
0.50
120.30
123.51
D
D
D
NE
CZ
NH1
ARG
ARG
ARG
30
30
30
N
1
-4.08
0.50
120.30
116.22
D
D
D
NE
CZ
NH2
ARG
ARG
ARG
53
53
53
N
1
A
A
O3'
C3'
DT
DT
2
2
-0.047
0.006
1.419
1.372
N
1
A
A
N1
C2
DT
DT
9
9
0.050
0.008
1.376
1.426
N
1
A
A
O3'
C3'
DG
DG
10
10
-0.045
0.006
1.419
1.374
N
1
A
A
O3'
C3'
DA
DA
12
12
-0.039
0.006
1.419
1.380
N
1
A
A
O3'
C3'
DC
DC
18
18
-0.072
0.006
1.419
1.347
N
1
A
A
O3'
C3'
DT
DT
19
19
-0.072
0.006
1.419
1.347
N
1
B
B
O3'
C3'
DT
DT
28
28
-0.094
0.006
1.419
1.325
N
1
B
B
O3'
C3'
DA
DA
29
29
-0.054
0.006
1.419
1.365
N
1
B
B
O3'
C3'
DA
DA
30
30
-0.040
0.006
1.419
1.379
N
1
B
B
C1'
N1
DT
DT
31
31
-0.088
0.014
1.468
1.380
N
1
B
B
N1
C2
DT
DT
31
31
-0.056
0.008
1.376
1.320
N
1
B
B
O3'
C3'
DA
DA
35
35
0.084
0.013
1.435
1.519
N
1
B
B
O3'
C3'
DC
DC
39
39
-0.037
0.006
1.419
1.382
N
1
C
C
CD
OE2
GLU
GLU
11
11
0.088
0.011
1.252
1.340
N
1
C
C
CD
OE2
GLU
GLU
19
19
0.069
0.011
1.252
1.321
N
1
C
C
CD
OE2
GLU
GLU
22
22
0.094
0.011
1.252
1.346
N
1
C
C
CD
OE2
GLU
GLU
37
37
0.068
0.011
1.252
1.320
N
1
C
C
CD
OE1
GLU
GLU
42
42
-0.068
0.011
1.252
1.184
N
1
D
D
CD
OE2
GLU
GLU
11
11
0.072
0.011
1.252
1.324
N
1
D
D
CD
OE2
GLU
GLU
22
22
0.078
0.011
1.252
1.330
N
1
D
D
CD
OE2
GLU
GLU
28
28
0.077
0.011
1.252
1.329
N
1
D
D
CD
OE2
GLU
GLU
37
37
0.084
0.011
1.252
1.336
N
1
D
D
CD
OE2
GLU
GLU
42
42
0.077
0.011
1.252
1.329
N
1
C
SER
36
-38.68
-74.64
1
C
GLU
42
-51.25
-7.50
1
C
ARG
53
-38.16
-30.15
1
D
ASN
23
-170.23
131.37
1
D
GLN
32
-53.99
-75.38
1
D
GLN
33
-28.54
-51.22
1
D
LYS
58
-23.54
-19.99
0.2250000
0.2250000
2.800
10.001
9072
1
2.800
10.001
0
1817
0
855
962
0.019
2.59
2.800
1HDD
9072
1
refinement
X-PLOR
CRYSTAL STRUCTURE OF AN ENGRAILED HOMEODOMAIN-DNA COMPLEX AT 2.8 ANGSTROMS RESOLUTION: A FRAMEWORK FOR UNDERSTANDING HOMEODOMAIN-DNA INTERACTIONS
1
N
N
2
N
N
3
N
N
3
N
N
C
SER
10
C
SER
12
HELX_P
C
GLU
22
C
GLU
24
1
C1
13
C
GLU
28
C
GLU
30
HELX_P
C
LEU
38
C
LEU
40
1
C2
11
C
GLU
42
C
GLU
44
HELX_P
C
LYS
58
C
LYS
60
1
C3
17
D
SER
10
D
SER
12
HELX_P
D
GLU
22
D
GLU
24
1
D1
13
D
GLU
28
D
GLU
30
HELX_P
D
LEU
38
D
LEU
40
1
D2
11
D
GLU
42
D
GLU
44
HELX_P
D
LYS
58
D
LYS
60
1
D3
17
hydrog
DT-DA PAIR
A
DT
2
A
N3
DT
2
1_555
B
DA
42
B
N1
DA
21
1_555
hydrog
WATSON-CRICK
A
DT
3
A
N3
DT
3
1_555
B
DA
41
B
N1
DA
20
1_555
hydrog
WATSON-CRICK
A
DT
3
A
O4
DT
3
1_555
B
DA
41
B
N6
DA
20
1_555
hydrog
WATSON-CRICK
A
DT
4
A
N3
DT
4
1_555
B
DA
40
B
N1
DA
19
1_555
hydrog
WATSON-CRICK
A
DT
4
A
O4
DT
4
1_555
B
DA
40
B
N6
DA
19
1_555
hydrog
WATSON-CRICK
A
DG
5
A
N1
DG
5
1_555
B
DC
39
B
N3
DC
18
1_555
hydrog
WATSON-CRICK
A
DG
5
A
N2
DG
5
1_555
B
DC
39
B
O2
DC
18
1_555
hydrog
WATSON-CRICK
A
DG
5
A
O6
DG
5
1_555
B
DC
39
B
N4
DC
18
1_555
hydrog
WATSON-CRICK
A
DC
6
A
N3
DC
6
1_555
B
DG
38
B
N1
DG
17
1_555
hydrog
WATSON-CRICK
A
DC
6
A
N4
DC
6
1_555
B
DG
38
B
O6
DG
17
1_555
hydrog
WATSON-CRICK
A
DC
6
A
O2
DC
6
1_555
B
DG
38
B
N2
DG
17
1_555
hydrog
WATSON-CRICK
A
DC
7
A
N3
DC
7
1_555
B
DG
37
B
N1
DG
16
1_555
hydrog
WATSON-CRICK
A
DC
7
A
N4
DC
7
1_555
B
DG
37
B
O6
DG
16
1_555
hydrog
WATSON-CRICK
A
DC
7
A
O2
DC
7
1_555
B
DG
37
B
N2
DG
16
1_555
hydrog
WATSON-CRICK
A
DA
8
A
N1
DA
8
1_555
B
DT
36
B
N3
DT
15
1_555
hydrog
WATSON-CRICK
A
DA
8
A
N6
DA
8
1_555
B
DT
36
B
O4
DT
15
1_555
hydrog
WATSON-CRICK
A
DT
9
A
N3
DT
9
1_555
B
DA
35
B
N1
DA
14
1_555
hydrog
WATSON-CRICK
A
DT
9
A
O4
DT
9
1_555
B
DA
35
B
N6
DA
14
1_555
hydrog
WATSON-CRICK
A
DG
10
A
N1
DG
10
1_555
B
DC
34
B
N3
DC
13
1_555
hydrog
WATSON-CRICK
A
DG
10
A
N2
DG
10
1_555
B
DC
34
B
O2
DC
13
1_555
hydrog
WATSON-CRICK
A
DG
10
A
O6
DG
10
1_555
B
DC
34
B
N4
DC
13
1_555
hydrog
WATSON-CRICK
A
DT
11
A
N3
DT
11
1_555
B
DA
33
B
N1
DA
12
1_555
hydrog
WATSON-CRICK
A
DT
11
A
O4
DT
11
1_555
B
DA
33
B
N6
DA
12
1_555
hydrog
WATSON-CRICK
A
DA
12
A
N1
DA
12
1_555
B
DT
32
B
N3
DT
11
1_555
hydrog
WATSON-CRICK
A
DA
12
A
N6
DA
12
1_555
B
DT
32
B
O4
DT
11
1_555
hydrog
WATSON-CRICK
A
DA
13
A
N1
DA
13
1_555
B
DT
31
B
N3
DT
10
1_555
hydrog
WATSON-CRICK
A
DA
13
A
N6
DA
13
1_555
B
DT
31
B
O4
DT
10
1_555
hydrog
WATSON-CRICK
A
DT
14
A
N3
DT
14
1_555
B
DA
30
B
N1
DA
9
1_555
hydrog
WATSON-CRICK
A
DT
14
A
O4
DT
14
1_555
B
DA
30
B
N6
DA
9
1_555
hydrog
WATSON-CRICK
A
DT
15
A
N3
DT
15
1_555
B
DA
29
B
N1
DA
8
1_555
hydrog
WATSON-CRICK
A
DT
15
A
O4
DT
15
1_555
B
DA
29
B
N6
DA
8
1_555
hydrog
WATSON-CRICK
A
DA
16
A
N1
DA
16
1_555
B
DT
28
B
N3
DT
7
1_555
hydrog
WATSON-CRICK
A
DA
16
A
N6
DA
16
1_555
B
DT
28
B
O4
DT
7
1_555
hydrog
WATSON-CRICK
A
DC
17
A
N3
DC
17
1_555
B
DG
27
B
N1
DG
6
1_555
hydrog
WATSON-CRICK
A
DC
17
A
N4
DC
17
1_555
B
DG
27
B
O6
DG
6
1_555
hydrog
WATSON-CRICK
A
DC
17
A
O2
DC
17
1_555
B
DG
27
B
N2
DG
6
1_555
hydrog
WATSON-CRICK
A
DC
18
A
N3
DC
18
1_555
B
DG
26
B
N1
DG
5
1_555
hydrog
WATSON-CRICK
A
DC
18
A
N4
DC
18
1_555
B
DG
26
B
O6
DG
5
1_555
hydrog
WATSON-CRICK
A
DC
18
A
O2
DC
18
1_555
B
DG
26
B
N2
DG
5
1_555
hydrog
WATSON-CRICK
A
DT
19
A
N3
DT
19
1_555
B
DA
25
B
N1
DA
4
1_555
hydrog
WATSON-CRICK
A
DT
19
A
O4
DT
19
1_555
B
DA
25
B
N6
DA
4
1_555
hydrog
WATSON-CRICK
A
DA
20
A
N1
DA
20
1_555
B
DT
24
B
N3
DT
3
1_555
hydrog
WATSON-CRICK
A
DA
20
A
N6
DA
20
1_555
B
DT
24
B
O4
DT
3
1_555
hydrog
WATSON-CRICK
A
DA
21
A
N1
DA
21
1_555
B
DT
23
B
N3
DT
2
1_555
hydrog
WATSON-CRICK
A
DA
21
A
N6
DA
21
1_555
B
DT
23
B
O4
DT
2
1_555
TRANSCRIPTION/DNA
PROTEIN-DNA COMPLEX, DOUBLE HELIX, TRANSCRIPTION-DNA COMPLEX
HMEN_DROME
UNP
3
P02836
1HDD
PDB
1
1HDD
1HDD
PDB
2
1HDD
453
512
1HDD
0
59
P02836
C
1
2
61
453
512
1HDD
0
59
P02836
D
1
2
61
1
21
1HDD
1
21
1HDD
A
2
1
21
22
42
1HDD
22
42
1HDD
B
3
1
21
1
initiating methionine
MET
-1
1HDD
C
P02836
UNP
1
2
initiating methionine
MET
-1
1HDD
D
P02836
UNP
1
5
C 1 2 1