0.019802
0.000000
0.002924
0.000000
0.009506
0.000000
0.000000
0.000000
0.028157
0.00000
0.00000
0.00000
Szilagyi, A.N.
Ghosh, M.
Garman, E.
Vas, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
98.40
90.00
50.500
105.200
35.900
C3 H7 O7 P
186.057
3-PHOSPHOGLYCERIC ACID
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C10 H14 N5 O7 P
347.221
ADENOSINE MONOPHOSPHATE
non-polymer
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J. Mol. Biol.
JMOBAK
0070
0022-2836
306
499
511
10.1006/jmbi.2000.4294
11178909
A 1.8 A resolution structure of pig muscle 3-phosphoglycerate kinase with bound MgADP and 3-phosphoglycerate in open conformation: new insight into the role of the nucleotide in domain closure.
2001
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
IMAGE PLATE
1997-06-15
MARRESEARCH
GE111 BENT AASYMMETRIC
SINGLE WAVELENGTH
M
x-ray
1
1.488
1.0
PX7.2
SRS
1.488
SYNCHROTRON
SRS BEAMLINE PX7.2
43404.156
PHOSPHOGLYCERATE KINASE
2.7.2.3
1
nat
polymer
347.221
ADENOSINE MONOPHOSPHATE
1
syn
non-polymer
24.305
MAGNESIUM ION
1
syn
non-polymer
186.057
3-PHOSPHOGLYCERIC ACID
1
syn
non-polymer
18.015
water
208
nat
water
PGK
no
no
NKLTLDKLNVKGKRVVMRVDFNVPMAAAQITNNARIKAAVPSIKFCLDDGAKSVVLMSHLGRPDGSPMPDKYSLQPVAAE
LKSALGKAVLFLKDCVGPAVEKACADPAAGSVILLENLRFHVEEEGKGKDASGNKAAGEPAKIKAFRASLSALGDVYVND
AFGTAHRAHSSMVGVNLPKKAGAFLMKKELNYFAAAAESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTF
LKVLNNMEIGTSLFDEAGKKIVKNLMSKAAANGVKITLPVDFVTADKFDEQAKIGQATVASGIPAGWMGLDCGPKSSAKY
SEAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDNVSHVSTGGGASLELLE
GKVLPGVDALSNV
NKLTLDKLNVKGKRVVMRVDFNVPMAAAQITNNARIKAAVPSIKFCLDDGAKSVVLMSHLGRPDGSPMPDKYSLQPVAAE
LKSALGKAVLFLKDCVGPAVEKACADPAAGSVILLENLRFHVEEEGKGKDASGNKAAGEPAKIKAFRASLSALGDVYVND
AFGTAHRAHSSMVGVNLPKKAGAFLMKKELNYFAAAAESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTF
LKVLNNMEIGTSLFDEAGKKIVKNLMSKAAANGVKITLPVDFVTADKFDEQAKIGQATVASGIPAGWMGLDCGPKSSAKY
SEAVARAKQIVWNGPVGVFEWEAFAQGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDNVSHVSTGGGASLELLE
GKVLPGVDALSNV
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
PIG
sample
9823
SUS SCROFA
MUSCLE
1
2.1
41
VAPOR DIFFUSION, HANGING DROP
7.70
THE ENZYME WAS DIALYSED IN 30 MM NAK-PHOSPHATE BUFFER, PH=8.0. SINGLE CRYSTALS WERE GROWN AT 15C WITHIN A FEW WEEKS IN HANGING DROPS (10-15 ML EACH) INITIALLY CONTAINING 1.25 M NAK-PHOSPHATE (PH=8.0), 100 MM 3-PG, 25 MM MGCL2, 20 MM ADP, 10 MM DITHIOTHREITOL, 0.02% NAN3 AND 15 MG/ML PGK. RESERVOIR SOLUTIONS CONTAINED 2.4-2.75 M NAK-PHOSPHATE(PH=8.0)., pH 7.70
288
citation
exptl_crystal_grow
pdbx_database_proc
pdbx_database_status
struct_biol
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Experimental preparation
Other
1
0
2001-02-26
1
1
2011-05-08
1
2
2011-07-13
1
3
2019-03-13
_citation.journal_abbrev
_citation.page_last
_citation.pdbx_database_id_DOI
_citation.title
_exptl_crystal_grow.method
_exptl_crystal_grow.temp
_pdbx_database_status.recvd_author_approval
PDBE
Y
PDBE
2000-11-16
REL
AMP
ADENOSINE MONOPHOSPHATE
MG
MAGNESIUM ION
3PG
3-PHOSPHOGLYCERIC ACID
HOH
water
AMP
417
2
AMP
AMP
417
A
MG
418
3
MG
MG
418
A
3PG
419
4
3PG
3PG
419
A
HOH
2001
5
HOH
HOH
2001
A
HOH
2002
5
HOH
HOH
2002
A
HOH
2003
5
HOH
HOH
2003
A
HOH
2004
5
HOH
HOH
2004
A
HOH
2005
5
HOH
HOH
2005
A
HOH
2006
5
HOH
HOH
2006
A
HOH
2007
5
HOH
HOH
2007
A
HOH
2008
5
HOH
HOH
2008
A
HOH
2009
5
HOH
HOH
2009
A
HOH
2010
5
HOH
HOH
2010
A
HOH
2011
5
HOH
HOH
2011
A
HOH
2012
5
HOH
HOH
2012
A
HOH
2013
5
HOH
HOH
2013
A
HOH
2014
5
HOH
HOH
2014
A
HOH
2015
5
HOH
HOH
2015
A
HOH
2016
5
HOH
HOH
2016
A
HOH
2017
5
HOH
HOH
2017
A
HOH
2018
5
HOH
HOH
2018
A
HOH
2019
5
HOH
HOH
2019
A
HOH
2020
5
HOH
HOH
2020
A
HOH
2021
5
HOH
HOH
2021
A
HOH
2022
5
HOH
HOH
2022
A
HOH
2023
5
HOH
HOH
2023
A
HOH
2024
5
HOH
HOH
2024
A
HOH
2025
5
HOH
HOH
2025
A
HOH
2026
5
HOH
HOH
2026
A
HOH
2027
5
HOH
HOH
2027
A
HOH
2028
5
HOH
HOH
2028
A
HOH
2029
5
HOH
HOH
2029
A
HOH
2030
5
HOH
HOH
2030
A
HOH
2031
5
HOH
HOH
2031
A
HOH
2032
5
HOH
HOH
2032
A
HOH
2033
5
HOH
HOH
2033
A
HOH
2034
5
HOH
HOH
2034
A
HOH
2035
5
HOH
HOH
2035
A
HOH
2036
5
HOH
HOH
2036
A
HOH
2037
5
HOH
HOH
2037
A
HOH
2038
5
HOH
HOH
2038
A
HOH
2039
5
HOH
HOH
2039
A
HOH
2040
5
HOH
HOH
2040
A
HOH
2041
5
HOH
HOH
2041
A
HOH
2042
5
HOH
HOH
2042
A
HOH
2043
5
HOH
HOH
2043
A
HOH
2044
5
HOH
HOH
2044
A
HOH
2045
5
HOH
HOH
2045
A
HOH
2046
5
HOH
HOH
2046
A
HOH
2047
5
HOH
HOH
2047
A
HOH
2048
5
HOH
HOH
2048
A
HOH
2049
5
HOH
HOH
2049
A
HOH
2050
5
HOH
HOH
2050
A
HOH
2051
5
HOH
HOH
2051
A
HOH
2052
5
HOH
HOH
2052
A
HOH
2053
5
HOH
HOH
2053
A
HOH
2054
5
HOH
HOH
2054
A
HOH
2055
5
HOH
HOH
2055
A
HOH
2056
5
HOH
HOH
2056
A
HOH
2057
5
HOH
HOH
2057
A
HOH
2058
5
HOH
HOH
2058
A
HOH
2059
5
HOH
HOH
2059
A
HOH
2060
5
HOH
HOH
2060
A
HOH
2061
5
HOH
HOH
2061
A
HOH
2062
5
HOH
HOH
2062
A
HOH
2063
5
HOH
HOH
2063
A
HOH
2064
5
HOH
HOH
2064
A
HOH
2065
5
HOH
HOH
2065
A
HOH
2066
5
HOH
HOH
2066
A
HOH
2067
5
HOH
HOH
2067
A
HOH
2068
5
HOH
HOH
2068
A
HOH
2069
5
HOH
HOH
2069
A
HOH
2070
5
HOH
HOH
2070
A
HOH
2071
5
HOH
HOH
2071
A
HOH
2072
5
HOH
HOH
2072
A
HOH
2073
5
HOH
HOH
2073
A
HOH
2074
5
HOH
HOH
2074
A
HOH
2075
5
HOH
HOH
2075
A
HOH
2076
5
HOH
HOH
2076
A
HOH
2077
5
HOH
HOH
2077
A
HOH
2078
5
HOH
HOH
2078
A
HOH
2079
5
HOH
HOH
2079
A
HOH
2080
5
HOH
HOH
2080
A
HOH
2081
5
HOH
HOH
2081
A
HOH
2082
5
HOH
HOH
2082
A
HOH
2083
5
HOH
HOH
2083
A
HOH
2084
5
HOH
HOH
2084
A
HOH
2085
5
HOH
HOH
2085
A
HOH
2086
5
HOH
HOH
2086
A
HOH
2087
5
HOH
HOH
2087
A
HOH
2088
5
HOH
HOH
2088
A
HOH
2089
5
HOH
HOH
2089
A
HOH
2090
5
HOH
HOH
2090
A
HOH
2091
5
HOH
HOH
2091
A
HOH
2092
5
HOH
HOH
2092
A
HOH
2093
5
HOH
HOH
2093
A
HOH
2094
5
HOH
HOH
2094
A
HOH
2095
5
HOH
HOH
2095
A
HOH
2096
5
HOH
HOH
2096
A
HOH
2097
5
HOH
HOH
2097
A
HOH
2098
5
HOH
HOH
2098
A
HOH
2099
5
HOH
HOH
2099
A
HOH
2100
5
HOH
HOH
2100
A
HOH
2101
5
HOH
HOH
2101
A
HOH
2102
5
HOH
HOH
2102
A
HOH
2103
5
HOH
HOH
2103
A
HOH
2104
5
HOH
HOH
2104
A
HOH
2105
5
HOH
HOH
2105
A
HOH
2106
5
HOH
HOH
2106
A
HOH
2107
5
HOH
HOH
2107
A
HOH
2108
5
HOH
HOH
2108
A
HOH
2109
5
HOH
HOH
2109
A
HOH
2110
5
HOH
HOH
2110
A
HOH
2111
5
HOH
HOH
2111
A
HOH
2112
5
HOH
HOH
2112
A
HOH
2113
5
HOH
HOH
2113
A
HOH
2114
5
HOH
HOH
2114
A
HOH
2115
5
HOH
HOH
2115
A
HOH
2116
5
HOH
HOH
2116
A
HOH
2117
5
HOH
HOH
2117
A
HOH
2118
5
HOH
HOH
2118
A
HOH
2119
5
HOH
HOH
2119
A
HOH
2120
5
HOH
HOH
2120
A
HOH
2121
5
HOH
HOH
2121
A
HOH
2122
5
HOH
HOH
2122
A
HOH
2123
5
HOH
HOH
2123
A
HOH
2124
5
HOH
HOH
2124
A
HOH
2125
5
HOH
HOH
2125
A
HOH
2126
5
HOH
HOH
2126
A
HOH
2127
5
HOH
HOH
2127
A
HOH
2128
5
HOH
HOH
2128
A
HOH
2129
5
HOH
HOH
2129
A
HOH
2130
5
HOH
HOH
2130
A
HOH
2131
5
HOH
HOH
2131
A
HOH
2132
5
HOH
HOH
2132
A
HOH
2133
5
HOH
HOH
2133
A
HOH
2134
5
HOH
HOH
2134
A
HOH
2135
5
HOH
HOH
2135
A
HOH
2136
5
HOH
HOH
2136
A
HOH
2137
5
HOH
HOH
2137
A
HOH
2138
5
HOH
HOH
2138
A
HOH
2139
5
HOH
HOH
2139
A
HOH
2140
5
HOH
HOH
2140
A
HOH
2141
5
HOH
HOH
2141
A
HOH
2142
5
HOH
HOH
2142
A
HOH
2143
5
HOH
HOH
2143
A
HOH
2144
5
HOH
HOH
2144
A
HOH
2145
5
HOH
HOH
2145
A
HOH
2146
5
HOH
HOH
2146
A
HOH
2147
5
HOH
HOH
2147
A
HOH
2148
5
HOH
HOH
2148
A
HOH
2149
5
HOH
HOH
2149
A
HOH
2150
5
HOH
HOH
2150
A
HOH
2151
5
HOH
HOH
2151
A
HOH
2152
5
HOH
HOH
2152
A
HOH
2153
5
HOH
HOH
2153
A
HOH
2154
5
HOH
HOH
2154
A
HOH
2155
5
HOH
HOH
2155
A
HOH
2156
5
HOH
HOH
2156
A
HOH
2157
5
HOH
HOH
2157
A
HOH
2158
5
HOH
HOH
2158
A
HOH
2159
5
HOH
HOH
2159
A
HOH
2160
5
HOH
HOH
2160
A
HOH
2161
5
HOH
HOH
2161
A
HOH
2162
5
HOH
HOH
2162
A
HOH
2163
5
HOH
HOH
2163
A
HOH
2164
5
HOH
HOH
2164
A
HOH
2165
5
HOH
HOH
2165
A
HOH
2166
5
HOH
HOH
2166
A
HOH
2167
5
HOH
HOH
2167
A
HOH
2168
5
HOH
HOH
2168
A
HOH
2169
5
HOH
HOH
2169
A
HOH
2170
5
HOH
HOH
2170
A
HOH
2171
5
HOH
HOH
2171
A
HOH
2172
5
HOH
HOH
2172
A
HOH
2173
5
HOH
HOH
2173
A
HOH
2174
5
HOH
HOH
2174
A
HOH
2175
5
HOH
HOH
2175
A
HOH
2176
5
HOH
HOH
2176
A
HOH
2177
5
HOH
HOH
2177
A
HOH
2178
5
HOH
HOH
2178
A
HOH
2179
5
HOH
HOH
2179
A
HOH
2180
5
HOH
HOH
2180
A
HOH
2181
5
HOH
HOH
2181
A
HOH
2182
5
HOH
HOH
2182
A
HOH
2183
5
HOH
HOH
2183
A
HOH
2184
5
HOH
HOH
2184
A
HOH
2185
5
HOH
HOH
2185
A
HOH
2186
5
HOH
HOH
2186
A
HOH
2187
5
HOH
HOH
2187
A
HOH
2188
5
HOH
HOH
2188
A
HOH
2189
5
HOH
HOH
2189
A
HOH
2190
5
HOH
HOH
2190
A
HOH
2191
5
HOH
HOH
2191
A
HOH
2192
5
HOH
HOH
2192
A
HOH
2193
5
HOH
HOH
2193
A
HOH
2194
5
HOH
HOH
2194
A
HOH
2195
5
HOH
HOH
2195
A
HOH
2196
5
HOH
HOH
2196
A
HOH
2197
5
HOH
HOH
2197
A
HOH
2198
5
HOH
HOH
2198
A
HOH
2199
5
HOH
HOH
2199
A
HOH
2200
5
HOH
HOH
2200
A
HOH
2201
5
HOH
HOH
2201
A
HOH
2202
5
HOH
HOH
2202
A
HOH
2203
5
HOH
HOH
2203
A
HOH
2204
5
HOH
HOH
2204
A
HOH
2205
5
HOH
HOH
2205
A
HOH
2206
5
HOH
HOH
2206
A
HOH
2207
5
HOH
HOH
2207
A
HOH
2208
5
HOH
HOH
2208
A
ASN
4
n
1
ASN
4
A
LYS
5
n
2
LYS
5
A
LEU
6
n
3
LEU
6
A
THR
7
n
4
THR
7
A
LEU
8
n
5
LEU
8
A
ASP
9
n
6
ASP
9
A
LYS
10
n
7
LYS
10
A
LEU
11
n
8
LEU
11
A
ASN
12
n
9
ASN
12
A
VAL
13
n
10
VAL
13
A
LYS
14
n
11
LYS
14
A
GLY
15
n
12
GLY
15
A
LYS
16
n
13
LYS
16
A
ARG
17
n
14
ARG
17
A
VAL
18
n
15
VAL
18
A
VAL
19
n
16
VAL
19
A
MET
20
n
17
MET
20
A
ARG
21
n
18
ARG
21
A
VAL
22
n
19
VAL
22
A
ASP
23
n
20
ASP
23
A
PHE
24
n
21
PHE
24
A
ASN
25
n
22
ASN
25
A
VAL
26
n
23
VAL
26
A
PRO
27
n
24
PRO
27
A
MET
28
n
25
MET
28
A
ALA
29
n
26
ALA
29
A
ALA
30
n
27
ALA
30
A
ALA
31
n
28
ALA
31
A
GLN
32
n
29
GLN
32
A
ILE
33
n
30
ILE
33
A
THR
34
n
31
THR
34
A
ASN
35
n
32
ASN
35
A
ASN
36
n
33
ASN
36
A
ALA
37
n
34
ALA
37
A
ARG
38
n
35
ARG
38
A
ILE
39
n
36
ILE
39
A
LYS
40
n
37
LYS
40
A
ALA
41
n
38
ALA
41
A
ALA
42
n
39
ALA
42
A
VAL
43
n
40
VAL
43
A
PRO
44
n
41
PRO
44
A
SER
45
n
42
SER
45
A
ILE
46
n
43
ILE
46
A
LYS
47
n
44
LYS
47
A
PHE
48
n
45
PHE
48
A
CYS
49
n
46
CYS
49
A
LEU
50
n
47
LEU
50
A
ASP
51
n
48
ASP
51
A
ASP
52
n
49
ASP
52
A
GLY
53
n
50
GLY
53
A
ALA
54
n
51
ALA
54
A
LYS
55
n
52
LYS
55
A
SER
56
n
53
SER
56
A
VAL
57
n
54
VAL
57
A
VAL
58
n
55
VAL
58
A
LEU
59
n
56
LEU
59
A
MET
60
n
57
MET
60
A
SER
61
n
58
SER
61
A
HIS
62
n
59
HIS
62
A
LEU
63
n
60
LEU
63
A
GLY
64
n
61
GLY
64
A
ARG
65
n
62
ARG
65
A
PRO
66
n
63
PRO
66
A
ASP
67
n
64
ASP
67
A
GLY
68
n
65
GLY
68
A
SER
69
n
66
SER
69
A
PRO
70
n
67
PRO
70
A
MET
71
n
68
MET
71
A
PRO
72
n
69
PRO
72
A
ASP
73
n
70
ASP
73
A
LYS
74
n
71
LYS
74
A
TYR
75
n
72
TYR
75
A
SER
76
n
73
SER
76
A
LEU
77
n
74
LEU
77
A
GLN
78
n
75
GLN
78
A
PRO
79
n
76
PRO
79
A
VAL
80
n
77
VAL
80
A
ALA
81
n
78
ALA
81
A
ALA
82
n
79
ALA
82
A
GLU
83
n
80
GLU
83
A
LEU
84
n
81
LEU
84
A
LYS
85
n
82
LYS
85
A
SER
86
n
83
SER
86
A
ALA
87
n
84
ALA
87
A
LEU
88
n
85
LEU
88
A
GLY
89
n
86
GLY
89
A
LYS
90
n
87
LYS
90
A
ALA
91
n
88
ALA
91
A
VAL
92
n
89
VAL
92
A
LEU
93
n
90
LEU
93
A
PHE
94
n
91
PHE
94
A
LEU
95
n
92
LEU
95
A
LYS
96
n
93
LYS
96
A
ASP
97
n
94
ASP
97
A
CYS
98
n
95
CYS
98
A
VAL
99
n
96
VAL
99
A
GLY
100
n
97
GLY
100
A
PRO
101
n
98
PRO
101
A
ALA
102
n
99
ALA
102
A
VAL
103
n
100
VAL
103
A
GLU
104
n
101
GLU
104
A
LYS
105
n
102
LYS
105
A
ALA
106
n
103
ALA
106
A
CYS
107
n
104
CYS
107
A
ALA
108
n
105
ALA
108
A
ASP
109
n
106
ASP
109
A
PRO
110
n
107
PRO
110
A
ALA
111
n
108
ALA
111
A
ALA
112
n
109
ALA
112
A
GLY
113
n
110
GLY
113
A
SER
114
n
111
SER
114
A
VAL
115
n
112
VAL
115
A
ILE
116
n
113
ILE
116
A
LEU
117
n
114
LEU
117
A
LEU
118
n
115
LEU
118
A
GLU
119
n
116
GLU
119
A
ASN
120
n
117
ASN
120
A
LEU
121
n
118
LEU
121
A
ARG
122
n
119
ARG
122
A
PHE
123
n
120
PHE
123
A
HIS
124
n
121
HIS
124
A
VAL
125
n
122
VAL
125
A
GLU
126
n
123
GLU
126
A
GLU
127
n
124
GLU
127
A
GLU
128
n
125
GLU
128
A
GLY
129
n
126
GLY
129
A
LYS
130
n
127
LYS
130
A
GLY
131
n
128
GLY
131
A
LYS
132
n
129
LYS
132
A
ASP
133
n
130
ASP
133
A
ALA
134
n
131
ALA
134
A
SER
135
n
132
SER
135
A
GLY
136
n
133
GLY
136
A
ASN
137
n
134
ASN
137
A
LYS
138
n
135
LYS
138
A
ALA
139
n
136
ALA
139
A
ALA
140
n
137
ALA
140
A
GLY
141
n
138
GLY
141
A
GLU
142
n
139
GLU
142
A
PRO
143
n
140
PRO
143
A
ALA
144
n
141
ALA
144
A
LYS
145
n
142
LYS
145
A
ILE
146
n
143
ILE
146
A
LYS
147
n
144
LYS
147
A
ALA
148
n
145
ALA
148
A
PHE
149
n
146
PHE
149
A
ARG
150
n
147
ARG
150
A
ALA
151
n
148
ALA
151
A
SER
152
n
149
SER
152
A
LEU
153
n
150
LEU
153
A
SER
154
n
151
SER
154
A
ALA
155
n
152
ALA
155
A
LEU
156
n
153
LEU
156
A
GLY
157
n
154
GLY
157
A
ASP
158
n
155
ASP
158
A
VAL
159
n
156
VAL
159
A
TYR
160
n
157
TYR
160
A
VAL
161
n
158
VAL
161
A
ASN
162
n
159
ASN
162
A
ASP
163
n
160
ASP
163
A
ALA
164
n
161
ALA
164
A
PHE
165
n
162
PHE
165
A
GLY
166
n
163
GLY
166
A
THR
167
n
164
THR
167
A
ALA
168
n
165
ALA
168
A
HIS
169
n
166
HIS
169
A
ARG
170
n
167
ARG
170
A
ALA
171
n
168
ALA
171
A
HIS
172
n
169
HIS
172
A
SER
173
n
170
SER
173
A
SER
174
n
171
SER
174
A
MET
175
n
172
MET
175
A
VAL
176
n
173
VAL
176
A
GLY
177
n
174
GLY
177
A
VAL
178
n
175
VAL
178
A
ASN
179
n
176
ASN
179
A
LEU
180
n
177
LEU
180
A
PRO
181
n
178
PRO
181
A
LYS
182
n
179
LYS
182
A
LYS
183
n
180
LYS
183
A
ALA
184
n
181
ALA
184
A
GLY
185
n
182
GLY
185
A
ALA
186
n
183
ALA
186
A
PHE
187
n
184
PHE
187
A
LEU
188
n
185
LEU
188
A
MET
189
n
186
MET
189
A
LYS
190
n
187
LYS
190
A
LYS
191
n
188
LYS
191
A
GLU
192
n
189
GLU
192
A
LEU
193
n
190
LEU
193
A
ASN
194
n
191
ASN
194
A
TYR
195
n
192
TYR
195
A
PHE
196
n
193
PHE
196
A
ALA
197
n
194
ALA
197
A
ALA
198
n
195
ALA
198
A
ALA
199
n
196
ALA
199
A
ALA
200
n
197
ALA
200
A
GLU
201
n
198
GLU
201
A
SER
202
n
199
SER
202
A
PRO
203
n
200
PRO
203
A
GLU
204
n
201
GLU
204
A
ARG
205
n
202
ARG
205
A
PRO
206
n
203
PRO
206
A
PHE
207
n
204
PHE
207
A
LEU
208
n
205
LEU
208
A
ALA
209
n
206
ALA
209
A
ILE
210
n
207
ILE
210
A
LEU
211
n
208
LEU
211
A
GLY
212
n
209
GLY
212
A
GLY
213
n
210
GLY
213
A
ALA
214
n
211
ALA
214
A
LYS
215
n
212
LYS
215
A
VAL
216
n
213
VAL
216
A
ALA
217
n
214
ALA
217
A
ASP
218
n
215
ASP
218
A
LYS
219
n
216
LYS
219
A
ILE
220
n
217
ILE
220
A
GLN
221
n
218
GLN
221
A
LEU
222
n
219
LEU
222
A
ILE
223
n
220
ILE
223
A
ASN
224
n
221
ASN
224
A
ASN
225
n
222
ASN
225
A
MET
226
n
223
MET
226
A
LEU
227
n
224
LEU
227
A
ASP
228
n
225
ASP
228
A
LYS
229
n
226
LYS
229
A
VAL
230
n
227
VAL
230
A
ASN
231
n
228
ASN
231
A
GLU
232
n
229
GLU
232
A
MET
233
n
230
MET
233
A
ILE
234
n
231
ILE
234
A
ILE
235
n
232
ILE
235
A
GLY
236
n
233
GLY
236
A
GLY
237
n
234
GLY
237
A
GLY
238
n
235
GLY
238
A
MET
239
n
236
MET
239
A
ALA
240
n
237
ALA
240
A
PHE
241
n
238
PHE
241
A
THR
242
n
239
THR
242
A
PHE
243
n
240
PHE
243
A
LEU
244
n
241
LEU
244
A
LYS
245
n
242
LYS
245
A
VAL
246
n
243
VAL
246
A
LEU
247
n
244
LEU
247
A
ASN
248
n
245
ASN
248
A
ASN
249
n
246
ASN
249
A
MET
250
n
247
MET
250
A
GLU
251
n
248
GLU
251
A
ILE
252
n
249
ILE
252
A
GLY
253
n
250
GLY
253
A
THR
254
n
251
THR
254
A
SER
255
n
252
SER
255
A
LEU
256
n
253
LEU
256
A
PHE
257
n
254
PHE
257
A
ASP
258
n
255
ASP
258
A
GLU
259
n
256
GLU
259
A
ALA
260
n
257
ALA
260
A
GLY
261
n
258
GLY
261
A
LYS
262
n
259
LYS
262
A
LYS
263
n
260
LYS
263
A
ILE
264
n
261
ILE
264
A
VAL
265
n
262
VAL
265
A
LYS
266
n
263
LYS
266
A
ASN
267
n
264
ASN
267
A
LEU
268
n
265
LEU
268
A
MET
269
n
266
MET
269
A
SER
270
n
267
SER
270
A
LYS
271
n
268
LYS
271
A
ALA
272
n
269
ALA
272
A
ALA
273
n
270
ALA
273
A
ALA
274
n
271
ALA
274
A
ASN
275
n
272
ASN
275
A
GLY
276
n
273
GLY
276
A
VAL
277
n
274
VAL
277
A
LYS
278
n
275
LYS
278
A
ILE
279
n
276
ILE
279
A
THR
280
n
277
THR
280
A
LEU
281
n
278
LEU
281
A
PRO
282
n
279
PRO
282
A
VAL
283
n
280
VAL
283
A
ASP
284
n
281
ASP
284
A
PHE
285
n
282
PHE
285
A
VAL
286
n
283
VAL
286
A
THR
287
n
284
THR
287
A
ALA
288
n
285
ALA
288
A
ASP
289
n
286
ASP
289
A
LYS
290
n
287
LYS
290
A
PHE
291
n
288
PHE
291
A
ASP
292
n
289
ASP
292
A
GLU
293
n
290
GLU
293
A
GLN
294
n
291
GLN
294
A
ALA
295
n
292
ALA
295
A
LYS
296
n
293
LYS
296
A
ILE
297
n
294
ILE
297
A
GLY
298
n
295
GLY
298
A
GLN
299
n
296
GLN
299
A
ALA
300
n
297
ALA
300
A
THR
301
n
298
THR
301
A
VAL
302
n
299
VAL
302
A
ALA
303
n
300
ALA
303
A
SER
304
n
301
SER
304
A
GLY
305
n
302
GLY
305
A
ILE
306
n
303
ILE
306
A
PRO
307
n
304
PRO
307
A
ALA
308
n
305
ALA
308
A
GLY
309
n
306
GLY
309
A
TRP
310
n
307
TRP
310
A
MET
311
n
308
MET
311
A
GLY
312
n
309
GLY
312
A
LEU
313
n
310
LEU
313
A
ASP
314
n
311
ASP
314
A
CYS
315
n
312
CYS
315
A
GLY
316
n
313
GLY
316
A
PRO
317
n
314
PRO
317
A
LYS
318
n
315
LYS
318
A
SER
319
n
316
SER
319
A
SER
320
n
317
SER
320
A
ALA
321
n
318
ALA
321
A
LYS
322
n
319
LYS
322
A
TYR
323
n
320
TYR
323
A
SER
324
n
321
SER
324
A
GLU
325
n
322
GLU
325
A
ALA
326
n
323
ALA
326
A
VAL
327
n
324
VAL
327
A
ALA
328
n
325
ALA
328
A
ARG
329
n
326
ARG
329
A
ALA
330
n
327
ALA
330
A
LYS
331
n
328
LYS
331
A
GLN
332
n
329
GLN
332
A
ILE
333
n
330
ILE
333
A
VAL
334
n
331
VAL
334
A
TRP
335
n
332
TRP
335
A
ASN
336
n
333
ASN
336
A
GLY
337
n
334
GLY
337
A
PRO
338
n
335
PRO
338
A
VAL
339
n
336
VAL
339
A
GLY
340
n
337
GLY
340
A
VAL
341
n
338
VAL
341
A
PHE
342
n
339
PHE
342
A
GLU
343
n
340
GLU
343
A
TRP
344
n
341
TRP
344
A
GLU
345
n
342
GLU
345
A
ALA
346
n
343
ALA
346
A
PHE
347
n
344
PHE
347
A
ALA
348
n
345
ALA
348
A
GLN
349
n
346
GLN
349
A
GLY
350
n
347
GLY
350
A
THR
351
n
348
THR
351
A
LYS
352
n
349
LYS
352
A
ALA
353
n
350
ALA
353
A
LEU
354
n
351
LEU
354
A
MET
355
n
352
MET
355
A
ASP
356
n
353
ASP
356
A
GLU
357
n
354
GLU
357
A
VAL
358
n
355
VAL
358
A
VAL
359
n
356
VAL
359
A
LYS
360
n
357
LYS
360
A
ALA
361
n
358
ALA
361
A
THR
362
n
359
THR
362
A
SER
363
n
360
SER
363
A
ARG
364
n
361
ARG
364
A
GLY
365
n
362
GLY
365
A
CYS
366
n
363
CYS
366
A
ILE
367
n
364
ILE
367
A
THR
368
n
365
THR
368
A
ILE
369
n
366
ILE
369
A
ILE
370
n
367
ILE
370
A
GLY
371
n
368
GLY
371
A
GLY
372
n
369
GLY
372
A
GLY
373
n
370
GLY
373
A
ASP
374
n
371
ASP
374
A
THR
375
n
372
THR
375
A
ALA
376
n
373
ALA
376
A
THR
377
n
374
THR
377
A
CYS
378
n
375
CYS
378
A
CYS
379
n
376
CYS
379
A
ALA
380
n
377
ALA
380
A
LYS
381
n
378
LYS
381
A
TRP
382
n
379
TRP
382
A
ASN
383
n
380
ASN
383
A
THR
384
n
381
THR
384
A
GLU
385
n
382
GLU
385
A
ASP
386
n
383
ASP
386
A
ASN
387
n
384
ASN
387
A
VAL
388
n
385
VAL
388
A
SER
389
n
386
SER
389
A
HIS
390
n
387
HIS
390
A
VAL
391
n
388
VAL
391
A
SER
392
n
389
SER
392
A
THR
393
n
390
THR
393
A
GLY
394
n
391
GLY
394
A
GLY
395
n
392
GLY
395
A
GLY
396
n
393
GLY
396
A
ALA
397
n
394
ALA
397
A
SER
398
n
395
SER
398
A
LEU
399
n
396
LEU
399
A
GLU
400
n
397
GLU
400
A
LEU
401
n
398
LEU
401
A
LEU
402
n
399
LEU
402
A
GLU
403
n
400
GLU
403
A
GLY
404
n
401
GLY
404
A
LYS
405
n
402
LYS
405
A
VAL
406
n
403
VAL
406
A
LEU
407
n
404
LEU
407
A
PRO
408
n
405
PRO
408
A
GLY
409
n
406
GLY
409
A
VAL
410
n
407
VAL
410
A
ASP
411
n
408
ASP
411
A
ALA
412
n
409
ALA
412
A
LEU
413
n
410
LEU
413
A
SER
414
n
411
SER
414
A
ASN
415
n
412
ASN
415
A
VAL
416
n
413
VAL
416
A
author_and_software_defined_assembly
PQS
1
monomeric
A
AMP
417
B
O1P
AMP
1_555
A
MG
418
C
MG
MG
1_555
A
ASP
374
A
OD1
ASP
371
1_555
101.3
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
93
A
N
LEU
90
A
O
VAL
115
A
O
VAL
112
A
N
ILE
116
A
N
ILE
113
A
O
VAL
57
A
O
VAL
54
A
N
VAL
58
A
N
VAL
55
A
O
VAL
18
A
O
VAL
15
A
N
VAL
19
A
N
VAL
16
A
O
VAL
159
A
O
VAL
156
A
N
ASN
162
A
N
ASN
159
A
O
ALA
184
A
O
ALA
181
A
N
GLY
131
A
N
GLY
128
A
O
ALA
139
A
O
ALA
136
A
N
THR
280
A
N
THR
277
A
O
MET
233
A
O
MET
230
A
N
ILE
234
A
N
ILE
231
A
O
ALA
209
A
O
ALA
206
A
N
LEU
208
A
N
LEU
205
A
O
GLN
332
A
O
GLN
329
A
N
ILE
333
A
N
ILE
330
A
O
ILE
367
A
O
ILE
364
A
N
ILE
370
A
N
ILE
367
A
O
HIS
390
A
O
HIS
387
A
N
ALA
300
A
N
ALA
297
A
O
PHE
285
A
O
PHE
282
A
N
ALA
288
A
N
ALA
285
A
O
MET
311
A
O
MET
308
1
A
C4'
AMP
417
PLANAR
1
3.45
0.50
120.30
123.75
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
38
38
38
N
1
9.74
1.60
100.20
109.94
A
A
A
CG
SD
CE
MET
MET
MET
71
71
71
N
1
17.49
2.70
111.00
128.49
A
A
A
N
CA
C
VAL
VAL
VAL
416
416
416
N
1
A
ASN
25
-66.89
71.06
1
A
ALA
29
-170.96
123.27
1
A
ALA
30
33.09
72.50
1
A
ASN
35
-169.66
119.28
1
A
ALA
37
-11.40
-61.15
1
A
PRO
70
-55.74
107.36
1
A
MET
71
-115.45
63.07
1
A
ASN
120
-36.46
118.13
1
A
ALA
171
-90.90
57.26
1
A
GLU
201
-129.14
-68.36
1
A
ALA
214
-97.88
-65.00
16.5
0.262
0.207
0.207
1.8
20.0
1662
32755
5.0
95.5
RANDOM
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
THE STARTING MODEL WAS CHOSEN AS THE STRUCTURE OF THE MNADP BINARY COMPLEX OF PIG MUSCLE PGK CRYSTALLISED IN THE PRESENCE OF AMMONIUM SULPHATE (MAY ET AL., PERSONAL COMM.).
1.8
20.0
208
3280
35
0
3037
0.011
1.62
24.7
2.4
0.299
0.237
1.86
3086
10
21.8
1.800
20.000
1HDI
34292
0.08100
0.08100
1
17.0000
2.400
95.6
0.24400
1.80
1.88
3.000
0.24400
1
2.30
98.1
refinement
X-PLOR
3.8
data reduction
DENZO
data scaling
SCALEPACK
phasing
X-PLOR
PHOSPHOGLYCERATE KINASE (E.C.2.7.2.3)
Pig muscle 3-PHOSPHOGLYCERATE KINASE complexed with 3-PG and MgADP.
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
A
LEU
8
A
LEU
5
HELX_P
A
LEU
11
A
LEU
8
5
1
4
A
ASN
36
A
ASN
33
HELX_P
A
ASP
52
A
ASP
49
1
2
17
A
LEU
77
A
LEU
74
HELX_P
A
GLY
89
A
GLY
86
1
3
13
A
GLY
100
A
GLY
97
HELX_P
A
ASP
109
A
ASP
106
1
4
10
A
ASN
120
A
ASN
117
HELX_P
A
HIS
124
A
HIS
121
5
5
5
A
GLU
142
A
GLU
139
HELX_P
A
LEU
156
A
LEU
153
1
6
15
A
ALA
164
A
ALA
161
HELX_P
A
ALA
168
A
ALA
165
5
7
5
A
HIS
172
A
HIS
169
HELX_P
A
GLY
177
A
GLY
174
1
8
6
A
ALA
186
A
ALA
183
HELX_P
A
GLU
201
A
GLU
198
1
9
16
A
VAL
216
A
VAL
213
HELX_P
A
ASP
218
A
ASP
215
5
10
3
A
LYS
219
A
LYS
216
HELX_P
A
ASP
228
A
ASP
225
1
11
10
A
MET
239
A
MET
236
HELX_P
A
ASN
249
A
ASN
246
1
12
11
A
ALA
260
A
ALA
257
HELX_P
A
LYS
263
A
LYS
260
5
13
4
A
ILE
264
A
ILE
261
HELX_P
A
GLY
276
A
GLY
273
1
14
13
A
GLY
316
A
GLY
313
HELX_P
A
ALA
330
A
ALA
327
1
15
15
A
TRP
344
A
TRP
341
HELX_P
A
PHE
347
A
PHE
344
5
16
4
A
ALA
348
A
ALA
345
HELX_P
A
ARG
364
A
ARG
361
1
17
17
A
GLY
373
A
GLY
370
HELX_P
A
TRP
382
A
TRP
379
1
18
10
A
GLY
394
A
GLY
391
HELX_P
A
GLU
403
A
GLU
400
1
19
10
A
LEU
407
A
LEU
404
HELX_P
A
ALA
412
A
ALA
409
1
20
6
metalc
2.988
A
MG
418
C
MG
MG
1_555
A
AMP
417
B
O1P
AMP
1_555
metalc
2.734
A
MG
418
C
MG
MG
1_555
A
ASP
374
A
OD1
ASP
371
1_555
PHOSPHOTRANSFERASE
PHOSPHOTRANSFERASE, KINASE, PHOSPHOGLYCERATE, TERNARY COMPLEX, GLYCOLYSIS
A
ARG
205
A
ARG
202
1
A
PRO
206
A
PRO
203
-0.13
1HDI
PDB
1
1HDI
4
416
1HDI
4
416
1HDI
A
1
1
413
6
2
6
3
parallel
parallel
parallel
parallel
parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
A
LEU
93
A
LEU
90
A
PHE
94
A
PHE
91
A
SER
114
A
SER
111
A
LEU
117
A
LEU
114
A
SER
56
A
SER
53
A
MET
60
A
MET
57
A
ARG
17
A
ARG
14
A
ARG
21
A
ARG
18
A
VAL
159
A
VAL
156
A
ASN
162
A
ASN
159
A
LYS
183
A
LYS
180
A
GLY
185
A
GLY
182
A
LYS
130
A
LYS
127
A
LYS
132
A
LYS
129
A
LYS
138
A
LYS
135
A
ALA
140
A
ALA
137
A
LYS
278
A
LYS
275
A
THR
280
A
THR
277
A
GLU
232
A
GLU
229
A
ILE
235
A
ILE
232
A
PHE
207
A
PHE
204
A
LEU
211
A
LEU
208
A
GLN
332
A
GLN
329
A
ASN
336
A
ASN
333
A
ILE
367
A
ILE
364
A
ILE
370
A
ILE
367
A
HIS
390
A
HIS
387
A
VAL
391
A
VAL
388
A
ILE
297
A
ILE
294
A
THR
301
A
THR
298
A
ASP
284
A
ASP
281
A
ALA
288
A
ALA
285
A
MET
311
A
MET
308
A
CYS
315
A
CYS
312
BINDING SITE FOR RESIDUE MG A 418
Software
2
BINDING SITE FOR RESIDUE AMP A 417
Software
21
BINDING SITE FOR RESIDUE 3PG A 419
Software
11
A
ASP
374
A
ASP
371
2
1_555
A
AMP
417
B
AMP
2
1_555
A
ALA
214
A
ALA
211
21
1_555
A
LYS
215
A
LYS
212
21
1_555
A
LYS
219
A
LYS
216
21
1_555
A
GLY
237
A
GLY
234
21
1_555
A
GLY
238
A
GLY
235
21
1_555
A
LEU
256
A
LEU
253
21
1_555
A
GLY
312
A
GLY
309
21
1_555
A
LEU
313
A
LEU
310
21
1_555
A
GLY
340
A
GLY
337
21
1_555
A
VAL
341
A
VAL
338
21
1_555
A
GLU
343
A
GLU
340
21
1_555
A
ASP
374
A
ASP
371
21
1_555
A
MG
418
C
MG
21
1_555
A
HOH
2111
E
HOH
21
1_555
A
HOH
2182
E
HOH
21
1_555
A
HOH
2201
E
HOH
21
1_555
A
HOH
2202
E
HOH
21
1_555
A
HOH
2203
E
HOH
21
1_555
A
HOH
2204
E
HOH
21
1_555
A
HOH
2205
E
HOH
21
1_555
A
HOH
2206
E
HOH
21
1_555
A
ASP
23
A
ASP
20
11
1_555
A
ASN
25
A
ASN
22
11
1_555
A
ARG
38
A
ARG
35
11
1_555
A
HIS
62
A
HIS
59
11
1_555
A
ARG
65
A
ARG
62
11
1_555
A
ARG
122
A
ARG
119
11
1_555
A
GLY
166
A
GLY
163
11
1_555
A
ARG
170
A
ARG
167
11
1_555
A
HOH
2009
E
HOH
11
1_555
A
HOH
2207
E
HOH
11
1_555
A
HOH
2208
E
HOH
11
1_555
4
P 1 21 1