0.019664 0.000000 0.000000 0.000000 0.019664 0.000000 0.000000 0.000000 0.009276 0.00000 0.00000 0.00000 Banfield, M. Robertson, A. Allen, S. Dando, J. Tyler, S. Bennett, G. Brain, S. Mason, G. Holden, P. Clarke, A. Naylor, R. Wilcock, G. Brady, R. Dawbarn, D. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 50.854 50.854 107.808 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C3 H8 O3 92.094 GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N C N 138 N O N 139 N C N 140 N O N 141 N C N 142 N O N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N N N 152 S C N 153 N C N 154 N O N 155 N C Y 156 N C Y 157 N N Y 158 N C Y 159 N C Y 160 N N N 161 N O N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N O N 173 N H N 174 N H N 175 N N N 176 S C N 177 N C N 178 N O N 179 S C N 180 N C N 181 N C N 182 N C N 183 N O N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N N N 198 S C N 199 N C N 200 N O N 201 N C N 202 N C N 203 N C N 204 N C N 205 N O N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N N N 220 S C N 221 N C N 222 N O N 223 N C N 224 N C N 225 N C N 226 N C N 227 N N N 228 N O N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N N N 245 S C N 246 N C N 247 N O N 248 N C N 249 N C N 250 N S N 251 N C N 252 N O N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N N N 265 S C N 266 N C N 267 N O N 268 N C Y 269 N C Y 270 N C Y 271 N C Y 272 N C Y 273 N C Y 274 N C N 275 N O N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N N N 288 S C N 289 N C N 290 N O N 291 N C N 292 N C N 293 N C N 294 N O N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 N C N 309 N O N 310 N O N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N N N 319 S C N 320 N C N 321 N O N 322 R C N 323 N O N 324 N C N 325 N O N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N N N 336 S C N 337 N C N 338 N O N 339 N C Y 340 N C Y 341 N C Y 342 N C Y 343 N N Y 344 N C Y 345 N C Y 346 N C Y 347 N C Y 348 N C N 349 N O N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N N N 363 S C N 364 N C N 365 N O N 366 N C Y 367 N C Y 368 N C Y 369 N C Y 370 N C Y 371 N C Y 372 N C N 373 N O N 374 N O N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N N N 387 S C N 388 N C N 389 N O N 390 N C N 391 N C N 392 N C N 393 N O N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing Y 153 N sing Y 154 N doub Y 155 N doub N 156 N sing Y 157 N sing N 158 N sing Y 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N doub N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N doub N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N doub N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N doub N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N doub N 257 N sing N 258 N sing N 259 N sing N 260 N sing Y 261 N doub Y 262 N sing Y 263 N sing N 264 N sing Y 265 N doub N 266 N sing Y 267 N doub N 268 N sing Y 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N doub N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N doub N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N doub N 326 N sing N 327 N sing N 328 N sing N 329 N sing Y 330 N doub Y 331 N sing Y 332 N sing N 333 N sing Y 334 N doub Y 335 N sing Y 336 N sing N 337 N sing Y 338 N sing Y 339 N doub N 340 N sing Y 341 N doub N 342 N sing Y 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N doub N 354 N sing N 355 N sing N 356 N sing N 357 N sing Y 358 N doub Y 359 N sing Y 360 N sing N 361 N sing Y 362 N doub N 363 N sing Y 364 N doub N 365 N sing Y 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N doub N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing US Biochem.Biophys.Res.Commun. BBRCA9 0146 0006-291X 282 131 10.1006/BBRC.2001.4462 11263982 Identification and Structure of the Nerve Growth Factor Binding Site on Trka. 2001 UK J.Mol.Biol. JMOBAK 0070 0022-2836 290 149 10.1006/JMBI.1999.2816 10388563 Crystal Structure of the Neurotrophin-Binding Domain of Trka, Trkb and Trkc 1999 UK Nature NATUAS 0006 0028-0836 401 184 10.1038/43705 10490030 Crystal Structure of Nerve Growth Factor in Complex with the Ligand-Binding Domain of the Trka Receptor 1999 10.2210/pdb1he7/pdb pdb_00001he7 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.0 1 MIRRORS IMAGE PLATE 1999-02-15 MARRESEARCH MIRRORS SINGLE WAVELENGTH M x-ray 1 0.91 1.0 X11 EMBL/DESY, HAMBURG 0.91 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X11 13922.378 HIGH AFFINITY NERVE GROWTH FACTOR RECEPTOR 2.7.1.112 LIGAND BINDING DOMAIN, SPANS RESIDUES 285-380 1 man polymer 92.094 GLYCEROL 1 syn non-polymer 18.015 water 32 nat water TRK1 TRANSFORMING TYROSINE KINASE PROTEIN, P140-TRKA, TRK-A no no SHMPASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTL LAANPFGQASASIMAAFMDNPFEFNPEDPIPDTNSTSGDPVEKKDE SHMPASVQLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTL LAANPFGQASASIMAAFMDNPFEFNPEDPIPDTNSTSGDPVEKKDE A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n HUMAN sample 9606 HOMO SAPIENS CYTOPLASM 511693 ESCHERICHIA COLI BL21 PLAMID PET15B 1 1.94 32.4 4.70 10 MG/ML PROTEIN + 0.1-0.3M NACL, 0.1M NA-CITRATE, PH 4.6 - 4.8 diffrn_source pdbx_unobs_or_zero_occ_atoms chem_comp_atom chem_comp_bond database_2 pdbx_database_status pdbx_initial_refinement_model pdbx_unobs_or_zero_occ_atoms struct_site repository Initial release Atomic model Data collection Derived calculations Non-polymer description Other Refinement description Structure summary Version format compliance Advisory Data collection Advisory Data collection Database references Derived calculations Other Refinement description 1 0 2001-04-02 1 1 2015-03-18 1 2 2019-07-24 1 3 2023-12-13 _diffrn_source.pdbx_synchrotron_site _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_sf _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id NGF BINDING DOMAIN OF HUMAN TRKA RECEPTOR NGF IN COMPLEX WITH DOMAIN 5 OF THE TRKA RECEPTOR SHEET DETERMINATION METHOD: AUTHOR PROVIDED. PDBE Y PDBE 2000-11-20 REL REL GOL GLYCEROL HOH water STRUCTURE PRESENTED IS OF A STRAND-SWAPPED DIMER. THE SECOND MONOMER IS GENERATED THROUGH CRYSTALLOGRAPHIC SYMMETRY. THIS IS NOT THE BIOLOGICALLY ACTIVE FORM OF THE MOLECULE. IT IS ACTIVE ONLY IN THE NON-STRAND SWAPPED STATE. THIS ENTRY IS A SPLICE VARIANT OF THE TRKA_HUMAN (P04629) SEQUENCE IN WHICH RESIDUES 393-398 ARE NOT PRESENT 1WWA PDB ENTRY 1WWA PDB experimental model GOL 1389 2 GOL GOL 1389 A HOH 2001 3 HOH HOH 2001 A HOH 2002 3 HOH HOH 2002 A HOH 2003 3 HOH HOH 2003 A HOH 2004 3 HOH HOH 2004 A HOH 2005 3 HOH HOH 2005 A HOH 2006 3 HOH HOH 2006 A HOH 2007 3 HOH HOH 2007 A HOH 2008 3 HOH HOH 2008 A HOH 2009 3 HOH HOH 2009 A HOH 2010 3 HOH HOH 2010 A HOH 2011 3 HOH HOH 2011 A HOH 2012 3 HOH HOH 2012 A HOH 2013 3 HOH HOH 2013 A HOH 2014 3 HOH HOH 2014 A HOH 2015 3 HOH HOH 2015 A HOH 2016 3 HOH HOH 2016 A HOH 2017 3 HOH HOH 2017 A HOH 2018 3 HOH HOH 2018 A HOH 2019 3 HOH HOH 2019 A HOH 2020 3 HOH HOH 2020 A HOH 2021 3 HOH HOH 2021 A HOH 2022 3 HOH HOH 2022 A HOH 2023 3 HOH HOH 2023 A HOH 2024 3 HOH HOH 2024 A HOH 2025 3 HOH HOH 2025 A HOH 2026 3 HOH HOH 2026 A HOH 2027 3 HOH HOH 2027 A HOH 2028 3 HOH HOH 2028 A HOH 2029 3 HOH HOH 2029 A HOH 2030 3 HOH HOH 2030 A HOH 2031 3 HOH HOH 2031 A HOH 2032 3 HOH HOH 2032 A SER 282 n 1 SER 282 A HIS 283 n 2 HIS 283 A MET 284 n 3 MET 284 A PRO 285 n 4 PRO 285 A ALA 286 n 5 ALA 286 A SER 287 n 6 SER 287 A VAL 288 n 7 VAL 288 A GLN 289 n 8 GLN 289 A LEU 290 n 9 LEU 290 A HIS 291 n 10 HIS 291 A THR 292 n 11 THR 292 A ALA 293 n 12 ALA 293 A VAL 294 n 13 VAL 294 A GLU 295 n 14 GLU 295 A MET 296 n 15 MET 296 A HIS 297 n 16 HIS 297 A HIS 298 n 17 HIS 298 A TRP 299 n 18 TRP 299 A CYS 300 n 19 CYS 300 A ILE 301 n 20 ILE 301 A PRO 302 n 21 PRO 302 A PHE 303 n 22 PHE 303 A SER 304 n 23 SER 304 A VAL 305 n 24 VAL 305 A ASP 306 n 25 ASP 306 A GLY 307 n 26 GLY 307 A GLN 308 n 27 GLN 308 A PRO 309 n 28 PRO 309 A ALA 310 n 29 ALA 310 A PRO 311 n 30 PRO 311 A SER 312 n 31 SER 312 A LEU 313 n 32 LEU 313 A ARG 314 n 33 ARG 314 A TRP 315 n 34 TRP 315 A LEU 316 n 35 LEU 316 A PHE 317 n 36 PHE 317 A ASN 318 n 37 ASN 318 A GLY 319 n 38 GLY 319 A SER 320 n 39 SER 320 A VAL 321 n 40 VAL 321 A LEU 322 n 41 LEU 322 A ASN 323 n 42 ASN 323 A GLU 324 n 43 GLU 324 A THR 325 n 44 THR 325 A SER 326 n 45 SER 326 A PHE 327 n 46 PHE 327 A ILE 328 n 47 ILE 328 A PHE 329 n 48 PHE 329 A THR 330 n 49 THR 330 A GLU 331 n 50 GLU 331 A PHE 332 n 51 PHE 332 A LEU 333 n 52 LEU 333 A GLU 334 n 53 GLU 334 A PRO 335 n 54 PRO 335 A ALA 336 n 55 ALA 336 A ALA 337 n 56 ALA 337 A ASN 338 n 57 ASN 338 A GLU 339 n 58 GLU 339 A THR 340 n 59 THR 340 A VAL 341 n 60 VAL 341 A ARG 342 n 61 ARG 342 A HIS 343 n 62 HIS 343 A GLY 344 n 63 GLY 344 A CYS 345 n 64 CYS 345 A LEU 346 n 65 LEU 346 A ARG 347 n 66 ARG 347 A LEU 348 n 67 LEU 348 A ASN 349 n 68 ASN 349 A GLN 350 n 69 GLN 350 A PRO 351 n 70 PRO 351 A THR 352 n 71 THR 352 A HIS 353 n 72 HIS 353 A VAL 354 n 73 VAL 354 A ASN 355 n 74 ASN 355 A ASN 356 n 75 ASN 356 A GLY 357 n 76 GLY 357 A ASN 358 n 77 ASN 358 A TYR 359 n 78 TYR 359 A THR 360 n 79 THR 360 A LEU 361 n 80 LEU 361 A LEU 362 n 81 LEU 362 A ALA 363 n 82 ALA 363 A ALA 364 n 83 ALA 364 A ASN 365 n 84 ASN 365 A PRO 366 n 85 PRO 366 A PHE 367 n 86 PHE 367 A GLY 368 n 87 GLY 368 A GLN 369 n 88 GLN 369 A ALA 370 n 89 ALA 370 A SER 371 n 90 SER 371 A ALA 372 n 91 ALA 372 A SER 373 n 92 SER 373 A ILE 374 n 93 ILE 374 A MET 375 n 94 MET 375 A ALA 376 n 95 ALA 376 A ALA 377 n 96 ALA 377 A PHE 378 n 97 PHE 378 A MET 379 n 98 MET 379 A ASP 380 n 99 ASP 380 A ASN 381 n 100 ASN 381 A PRO 382 n 101 PRO 382 A PHE 383 n 102 PHE 383 A GLU 384 n 103 GLU 384 A PHE 385 n 104 PHE 385 A ASN 386 n 105 ASN 386 A PRO 387 n 106 PRO 387 A GLU 388 n 107 GLU 388 A ASP 389 n 108 ASP 389 A n 109 390 A n 110 391 A n 111 392 A n 112 399 A n 113 400 A n 114 401 A n 115 402 A n 116 403 A n 117 404 A n 118 405 A n 119 406 A n 120 407 A n 121 408 A n 122 409 A n 123 410 A n 124 411 A n 125 412 A n 126 413 A software_defined_assembly PQS 2 dimeric 4770 -42.2 13900 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 6_565 x,-y+1,-z+1/2 crystal symmetry operation 0.0000000000 50.8540000000 53.9040000000 A N VAL 305 A N VAL 24 A O ARG 342 A O ARG 61 A N ARG 347 A N ARG 66 A O PHE 329 A O PHE 48 A N SER 320 A N SER 39 A O PHE 317 A O PHE 36 A N LEU 316 A N LEU 35 A O THR 360 A O THR 79 A N ASN 365 A N ASN 84 A O GLY 368 A O GLY 87 1 A HOH 2007 C HOH 1 A OG SER 304 A OG SER 23 0 Y 1 A CD GLN 308 A CD GLN 27 0 Y 1 A OE1 GLN 308 A OE1 GLN 27 0 Y 1 A NE2 GLN 308 A NE2 GLN 27 0 Y 1 A CA ASP 389 A CA ASP 108 1 Y 1 A C ASP 389 A C ASP 108 1 Y 1 A O ASP 389 A O ASP 108 1 Y 1 A CB ASP 389 A CB ASP 108 1 Y 1 A CG ASP 389 A CG ASP 108 1 Y 1 A OD1 ASP 389 A OD1 ASP 108 1 Y 1 A OD2 ASP 389 A OD2 ASP 108 1 Y 1 A PRO 390 A PRO 109 1 Y 1 A ILE 391 A ILE 110 1 Y 1 A PRO 392 A PRO 111 1 Y 1 A ASP 399 A ASP 112 1 Y 1 A THR 400 A THR 113 1 Y 1 A ASN 401 A ASN 114 1 Y 1 A SER 402 A SER 115 1 Y 1 A THR 403 A THR 116 1 Y 1 A SER 404 A SER 117 1 Y 1 A GLY 405 A GLY 118 1 Y 1 A ASP 406 A ASP 119 1 Y 1 A PRO 407 A PRO 120 1 Y 1 A VAL 408 A VAL 121 1 Y 1 A GLU 409 A GLU 122 1 Y 1 A LYS 410 A LYS 123 1 Y 1 A LYS 411 A LYS 124 1 Y 1 A ASP 412 A ASP 125 1 Y 1 A GLU 413 A GLU 126 1 Y 1 -17.47 2.70 111.00 93.53 A A A N CA C LEU LEU LEU 346 346 346 N 1 A GLU 334 -36.33 131.87 1 A ASN 338 70.23 -31.14 1 A ASN 381 -55.15 106.32 1 A ASN 381 -52.14 106.32 1 A GLU 388 -87.10 34.85 PROTEIN_REP.PARAM WATER_REP.PARAM GOL.PAR 45.3 -8.987 0.000 0.000 -8.987 0.000 17.974 THE FOLLOWING ATOMS WERE SET TO ZERO OCCUPANCY AS THEY WERE NOT OBSERVED IN ELECTRON DENSITY, SER A:304 ATOM: OG GLN A:308 ATOMS: CD OE1 NE2 GLU: THE C-TERMINAL RESIDUE WAS NOT SEEN IN THE DENSITY MAPS 0.276 0.237 0.237 2.0 40 992 10145 10.0 99.9 10000 1 RESTRAINED THROUGHOUT 0.0 MOLECULAR REPLACEMENT PDB ENTRY 1WWA 46.8 0.35 0.35 0.28 5.00 0.17 0.18 2.0 40 32 876 6 0 838 0.016 1.74 27.5 1.03 1.650 1.50 2.756 2.0 2.238 2.0 3.152 2.5 0.291 0.254 2.09 123 1109 8 10 99.9 23.9 1.900 40.000 1HE7 11819 -3.000 0.04100 1 43.2000 7.200 99.9 0.23300 1.90 1.99 4.400 1 5.70 99.7 refinement CNS 1.0 data reduction DENZO data scaling SCALEPACK phasing AMoRE Human Nerve growth factor receptor TrkA 1 N N 2 N N 3 N N IN DILUTE SOLUTION THE PROTEIN EXISTS AS A MONOMER (NOSTRAND-SWAPPING) AND IS ACTIVE. THE PROTEIN IS INACTIVE INTHE DIMERIC FORM SEEN IN THE CRYSTAL. THE MATRICES FORCONTRUCTING THE DIMER ARE GIVEN IN REMARK 350 BELOW A THR 352 A THR 71 HELX_P A ASN 356 A ASN 75 5 1 5 disulf 2.041 A CYS 300 A SG CYS 19 1_555 A CYS 345 A SG CYS 64 1_555 TRANSFERASE TRANSFERASE, TRK-RECEPTOR, STRAND-SWAPPING, NERVE GROWTH FACTOR A GLN 308 A GLN 27 1 A PRO 309 A PRO 28 0.29 TRKA_HUMAN UNP 1 P04629 282 413 1HE7 282 413 P04629 A 1 1 126 1 VAL cloning artifact SER 282 1HE7 A P04629 UNP 282 1 1 SER cloning artifact HIS 283 1HE7 A P04629 UNP 283 2 1 PHE cloning artifact MET 284 1HE7 A P04629 UNP 284 3 1 VAL deletion 1HE7 A P04629 UNP 393 1 SER deletion 1HE7 A P04629 UNP 394 1 PHE deletion 1HE7 A P04629 UNP 395 1 SER deletion 1HE7 A P04629 UNP 396 1 PRO deletion 1HE7 A P04629 UNP 397 1 VAL deletion 1HE7 A P04629 UNP 398 3 4 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A HIS 298 A HIS 17 A VAL 305 A VAL 24 A ARG 342 A ARG 61 A ASN 349 A ASN 68 A ILE 328 A ILE 47 A LEU 333 A LEU 52 A SER 320 A SER 39 A VAL 321 A VAL 40 A SER 312 A SER 31 A PHE 317 A PHE 36 A GLY 357 A GLY 76 A ASN 365 A ASN 84 A GLY 368 A GLY 87 A ALA 376 A ALA 95 BINDING SITE FOR RESIDUE GOL A 1389 A GOL 1389 Software 6 A LEU 313 A LEU 32 6 1_555 A ARG 314 A ARG 33 6 1_555 A TRP 315 A TRP 34 6 1_555 A LEU 322 A LEU 41 6 1_555 A GLU 324 A GLU 43 6 1_555 A HOH 2032 C HOH 6 1_555 95 P 43 2 2