0.023312 0.000000 0.000000 0.000000 0.017971 0.000000 0.000000 0.000000 0.009305 0.00000 0.00000 0.00000 Wurtele, M. Renault, L. Barbieri, J.T. Wittinghofer, A. Wolf, E. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 42.897 55.646 107.472 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking NE FEBS Lett. FEBLAL 0165 0014-5793 491 26 10.1016/S0014-5793(01)02105-6 11226412 Structure of the Exos Gtpase Activating Domain 2001 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.0 1 CCD 2000-07-15 MARRESEARCH MAD M x-ray 1 0.9789 1.0 0.9790 1.0 0.8856 1.0 1.54 1.0 BM14 ESRF 0.9789,0.9790,0.8856,1.54 SYNCHROTRON ESRF BEAMLINE BM14 14432.834 EXOENZYME S 96-234 GTPASE-ACTIVATING PROTEIN (GAP-DOMAIN) 1 man polymer 18.015 water 65 nat water EXOS no yes KQ(MSE)VLQQALP(MSE)TLKGLDKASELATLTPEGLAREHSRLASGDGALRSLSTALAGIRAGSQVEESRIQAGRLLE RSIGGIALQQWGTTGGAASQLVLDASPELRREITDQLHQV(MSE)SEVALLRQAVESEVSRVSADY KQMVLQQALPMTLKGLDKASELATLTPEGLAREHSRLASGDGALRSLSTALAGIRAGSQVEESRIQAGRLLERSIGGIAL QQWGTTGGAASQLVLDASPELRREITDQLHQVMSEVALLRQAVESEVSRVSADY A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample EXOS 287 PSEUDOMONAS AERUGINOSA 562 ESCHERICHIA COLI PGEX-2T 1 2.22 44.64 5.50 MGCL2, (NH4)2SO4, PEG 6000, NA-CACODYLATE PH5.5, pH 5.50 repository Initial release Version format compliance Version format compliance 1 0 2001-03-19 1 1 2011-05-08 1 2 2011-07-13 CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN THE GAP DOMAIN OF THE PSEUDOMONAS AERUGINOSA EXOS TOXIN AND HUMAN RAC PDBE Y PDBE 2000-11-21 REL HOH water HOH 2001 2 HOH HOH 2001 A HOH 2002 2 HOH HOH 2002 A HOH 2003 2 HOH HOH 2003 A HOH 2004 2 HOH HOH 2004 A HOH 2005 2 HOH HOH 2005 A HOH 2006 2 HOH HOH 2006 A HOH 2007 2 HOH HOH 2007 A HOH 2008 2 HOH HOH 2008 A HOH 2009 2 HOH HOH 2009 A HOH 2010 2 HOH HOH 2010 A HOH 2011 2 HOH HOH 2011 A HOH 2012 2 HOH HOH 2012 A HOH 2013 2 HOH HOH 2013 A HOH 2014 2 HOH HOH 2014 A HOH 2015 2 HOH HOH 2015 A HOH 2016 2 HOH HOH 2016 A HOH 2017 2 HOH HOH 2017 A HOH 2018 2 HOH HOH 2018 A HOH 2019 2 HOH HOH 2019 A HOH 2020 2 HOH HOH 2020 A HOH 2021 2 HOH HOH 2021 A HOH 2022 2 HOH HOH 2022 A HOH 2023 2 HOH HOH 2023 A HOH 2024 2 HOH HOH 2024 A HOH 2025 2 HOH HOH 2025 A HOH 2026 2 HOH HOH 2026 A HOH 2027 2 HOH HOH 2027 A HOH 2028 2 HOH HOH 2028 A HOH 2029 2 HOH HOH 2029 A HOH 2030 2 HOH HOH 2030 A HOH 2031 2 HOH HOH 2031 A HOH 2032 2 HOH HOH 2032 A HOH 2033 2 HOH HOH 2033 A HOH 2034 2 HOH HOH 2034 A HOH 2035 2 HOH HOH 2035 A HOH 2036 2 HOH HOH 2036 A HOH 2037 2 HOH HOH 2037 A HOH 2038 2 HOH HOH 2038 A HOH 2039 2 HOH HOH 2039 A HOH 2040 2 HOH HOH 2040 A HOH 2041 2 HOH HOH 2041 A HOH 2042 2 HOH HOH 2042 A HOH 2043 2 HOH HOH 2043 A HOH 2044 2 HOH HOH 2044 A HOH 2045 2 HOH HOH 2045 A HOH 2046 2 HOH HOH 2046 A HOH 2047 2 HOH HOH 2047 A HOH 2048 2 HOH HOH 2048 A HOH 2049 2 HOH HOH 2049 A HOH 2050 2 HOH HOH 2050 A HOH 2051 2 HOH HOH 2051 A HOH 2052 2 HOH HOH 2052 A HOH 2053 2 HOH HOH 2053 A HOH 2054 2 HOH HOH 2054 A HOH 2055 2 HOH HOH 2055 A HOH 2056 2 HOH HOH 2056 A HOH 2057 2 HOH HOH 2057 A HOH 2058 2 HOH HOH 2058 A HOH 2059 2 HOH HOH 2059 A HOH 2060 2 HOH HOH 2060 A HOH 2061 2 HOH HOH 2061 A HOH 2062 2 HOH HOH 2062 A HOH 2063 2 HOH HOH 2063 A HOH 2064 2 HOH HOH 2064 A HOH 2065 2 HOH HOH 2065 A LYS 102 n 1 LYS 102 A GLN 103 n 2 GLN 103 A MSE 104 n 3 MSE 104 A VAL 105 n 4 VAL 105 A LEU 106 n 5 LEU 106 A GLN 107 n 6 GLN 107 A GLN 108 n 7 GLN 108 A ALA 109 n 8 ALA 109 A LEU 110 n 9 LEU 110 A PRO 111 n 10 PRO 111 A MSE 112 n 11 MSE 112 A THR 113 n 12 THR 113 A LEU 114 n 13 LEU 114 A LYS 115 n 14 LYS 115 A GLY 116 n 15 GLY 116 A LEU 117 n 16 LEU 117 A ASP 118 n 17 ASP 118 A LYS 119 n 18 LYS 119 A ALA 120 n 19 ALA 120 A SER 121 n 20 SER 121 A GLU 122 n 21 GLU 122 A LEU 123 n 22 LEU 123 A ALA 124 n 23 ALA 124 A THR 125 n 24 THR 125 A LEU 126 n 25 LEU 126 A THR 127 n 26 THR 127 A PRO 128 n 27 PRO 128 A GLU 129 n 28 GLU 129 A GLY 130 n 29 GLY 130 A LEU 131 n 30 LEU 131 A ALA 132 n 31 ALA 132 A ARG 133 n 32 ARG 133 A GLU 134 n 33 GLU 134 A HIS 135 n 34 HIS 135 A SER 136 n 35 SER 136 A ARG 137 n 36 ARG 137 A LEU 138 n 37 LEU 138 A ALA 139 n 38 ALA 139 A SER 140 n 39 SER 140 A GLY 141 n 40 GLY 141 A ASP 142 n 41 ASP 142 A GLY 143 n 42 GLY 143 A ALA 144 n 43 ALA 144 A LEU 145 n 44 LEU 145 A ARG 146 n 45 ARG 146 A SER 147 n 46 SER 147 A LEU 148 n 47 LEU 148 A SER 149 n 48 SER 149 A THR 150 n 49 THR 150 A ALA 151 n 50 ALA 151 A LEU 152 n 51 LEU 152 A ALA 153 n 52 ALA 153 A GLY 154 n 53 GLY 154 A ILE 155 n 54 ILE 155 A ARG 156 n 55 ARG 156 A ALA 157 n 56 ALA 157 A GLY 158 n 57 GLY 158 A SER 159 n 58 SER 159 A GLN 160 n 59 GLN 160 A VAL 161 n 60 VAL 161 A GLU 162 n 61 GLU 162 A GLU 163 n 62 GLU 163 A SER 164 n 63 SER 164 A ARG 165 n 64 ARG 165 A ILE 166 n 65 ILE 166 A GLN 167 n 66 GLN 167 A ALA 168 n 67 ALA 168 A GLY 169 n 68 GLY 169 A ARG 170 n 69 ARG 170 A LEU 171 n 70 LEU 171 A LEU 172 n 71 LEU 172 A GLU 173 n 72 GLU 173 A ARG 174 n 73 ARG 174 A SER 175 n 74 SER 175 A ILE 176 n 75 ILE 176 A GLY 177 n 76 GLY 177 A GLY 178 n 77 GLY 178 A ILE 179 n 78 ILE 179 A ALA 180 n 79 ALA 180 A LEU 181 n 80 LEU 181 A GLN 182 n 81 GLN 182 A GLN 183 n 82 GLN 183 A TRP 184 n 83 TRP 184 A GLY 185 n 84 GLY 185 A THR 186 n 85 THR 186 A THR 187 n 86 THR 187 A GLY 188 n 87 GLY 188 A GLY 189 n 88 GLY 189 A ALA 190 n 89 ALA 190 A ALA 191 n 90 ALA 191 A SER 192 n 91 SER 192 A GLN 193 n 92 GLN 193 A LEU 194 n 93 LEU 194 A VAL 195 n 94 VAL 195 A LEU 196 n 95 LEU 196 A ASP 197 n 96 ASP 197 A ALA 198 n 97 ALA 198 A SER 199 n 98 SER 199 A PRO 200 n 99 PRO 200 A GLU 201 n 100 GLU 201 A LEU 202 n 101 LEU 202 A ARG 203 n 102 ARG 203 A ARG 204 n 103 ARG 204 A GLU 205 n 104 GLU 205 A ILE 206 n 105 ILE 206 A THR 207 n 106 THR 207 A ASP 208 n 107 ASP 208 A GLN 209 n 108 GLN 209 A LEU 210 n 109 LEU 210 A HIS 211 n 110 HIS 211 A GLN 212 n 111 GLN 212 A VAL 213 n 112 VAL 213 A MSE 214 n 113 MSE 214 A SER 215 n 114 SER 215 A GLU 216 n 115 GLU 216 A VAL 217 n 116 VAL 217 A ALA 218 n 117 ALA 218 A LEU 219 n 118 LEU 219 A LEU 220 n 119 LEU 220 A ARG 221 n 120 ARG 221 A GLN 222 n 121 GLN 222 A ALA 223 n 122 ALA 223 A VAL 224 n 123 VAL 224 A GLU 225 n 124 GLU 225 A SER 226 n 125 SER 226 A GLU 227 n 126 GLU 227 A VAL 228 n 127 VAL 228 A SER 229 n 128 SER 229 A ARG 230 n 129 ARG 230 A VAL 231 n 130 VAL 231 A SER 232 n 131 SER 232 A ALA 233 n 132 ALA 233 A ASP 234 n 133 ASP 234 A TYR 235 n 134 TYR 235 A software_defined_assembly PQS 2 dimeric 1770 -10.9 15420 A MSE 104 SELENOMETHIONINE A MSE 3 MET A MSE 112 SELENOMETHIONINE A MSE 11 MET A MSE 214 SELENOMETHIONINE A MSE 113 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 4_566 x,-y+1,-z+1 crystal symmetry operation 0.0000000000 55.6460000000 107.4720000000 A N ILE 176 A N ILE 75 A O ILE 179 A O ILE 78 1 -6.35 0.90 118.30 111.95 A A A CB CG OD2 ASP ASP ASP 118 118 118 N 1 -3.79 0.50 120.30 116.51 A A A NE CZ NH1 ARG ARG ARG 174 174 174 N 1 A LYS 119 -66.91 0.33 1 A ARG 133 -66.95 -71.16 1 A HIS 135 -24.66 -60.77 1 A SER 136 -52.87 -95.09 1 A ARG 137 -17.09 -61.38 1 A LEU 138 -70.23 48.18 1 A ALA 139 -158.43 8.79 1 A TRP 184 -57.53 -9.81 1 A PRO 200 -37.40 -9.10 1 A ALA 233 -53.96 -73.02 PROTEIN_REP.PARAM PROTEIN.TOP WATER_REP.PARAM WATER.TOP WATER_REP.PARAM WATER.TOP ION.PARAM ION.TOP 62.4 -13.82 0.00 0.00 28.18 0.00 -14.36 FIRST POST SUBMISSION CORRECTION C- TERMINUS NOT VISIBLE IN THE ELECTRON DENSITY MAPS. 0.265 0.012 0.257 0.257 2.40 20.00 518 5237 9.9 99.1 RANDOM 1274374.44 1 RESTRAINED THROUGHOUT 0.0 MAD FLAT MODEL 75.8674 0.389157 0.41 0.35 5.00 0.30 0.32 2.40 20.00 65 1065 0 0 1000 0.019 2.1 21.7 1.36 1.96 1.50 3.44 2.00 2.83 2.00 4.14 2.50 0.347 0.038 0.311 2.55 85 747 6 10.2 96.3 2.400 20.000 1HE9 5237 3.000 0.05300 1 34.0000 99.1 2.40 2.49 8.000 0.17500 1 98.4 refinement CNS 1.0 data reduction DENZO data scaling SCALEPACK phasing SHARP EXOENZYME S Crystal structure of the GAP domain of the Pseudomonas aeruginosa ExoS toxin 1 N N 2 N N BIOLOGICAL_UNIT: MONOMER A LYS 102 A LYS 1 HELX_P A ALA 109 A ALA 8 1 1 8 A THR 113 A THR 12 HELX_P A LYS 119 A LYS 18 1 2 7 A ALA 120 A ALA 19 HELX_P A THR 125 A THR 24 5 3 6 A THR 127 A THR 26 HELX_P A HIS 135 A HIS 34 1 4 9 A GLY 143 A GLY 42 HELX_P A SER 159 A SER 58 1 5 17 A VAL 161 A VAL 60 HELX_P A ARG 174 A ARG 73 1 6 14 A GLN 182 A GLN 81 HELX_P A TRP 184 A TRP 83 5 7 3 A GLY 189 A GLY 88 HELX_P A ALA 198 A ALA 97 1 8 10 A GLU 201 A GLU 100 HELX_P A VAL 213 A VAL 112 1 9 13 A SER 215 A SER 114 HELX_P A SER 232 A SER 131 1 10 18 covale 1.333 A GLN 103 A C GLN 2 1_555 A MSE 104 A N MSE 3 1_555 covale 1.333 A MSE 104 A C MSE 3 1_555 A VAL 105 A N VAL 4 1_555 covale 1.327 A PRO 111 A C PRO 10 1_555 A MSE 112 A N MSE 11 1_555 covale 1.322 A MSE 112 A C MSE 11 1_555 A THR 113 A N THR 12 1_555 covale 1.331 A VAL 213 A C VAL 112 1_555 A MSE 214 A N MSE 113 1_555 covale 1.329 A MSE 214 A C MSE 113 1_555 A SER 215 A N SER 114 1_555 TOXIN (EXOENZYME S) TOXIN (EXOENZYME S), EXOS, PSEUDOMONAS AERUGINOSA, GAP, TOXIN, VIRULENCE FACTOR, SIGNAL TRANSDUCTION Q51451 UNP 1 Q51451 102 235 1HE9 102 235 Q51451 A 1 1 134 1 LYS cloning artifact TYR 235 1HE9 A Q51451 UNP 235 134 1 MET modified residue MSE 104 1HE9 A Q51451 UNP 104 3 1 MET modified residue MSE 112 1HE9 A Q51451 UNP 112 11 1 MET modified residue MSE 214 1HE9 A Q51451 UNP 214 113 2 anti-parallel A SER 175 A SER 74 A ILE 176 A ILE 75 A ILE 179 A ILE 78 A ALA 180 A ALA 79 20 C 2 2 21