0.012642 0.000000 0.000000 0.000000 0.012642 0.000000 0.000000 0.000000 0.026525 0.00000 0.00000 0.00000 Wilson, K.P. Malcolm, B.A. Matthews, B.W. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 79.100 79.100 37.700 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US J.Biol.Chem. JBCHA3 0071 0021-9258 267 10842 10849 1587860 Structural and thermodynamic analysis of compensating mutations within the core of chicken egg white lysozyme. 1992 UK Nature NATUAS 0006 0028-0836 344 86 Ancestral Lysozymes Reconstructed, Neutrality Tested, and Thermostability Linked to Hydrocarbon Packing 1990 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 101 298 1 Kodak No-Screen X-ray film FILM OSCILLATION CAMERA graphite SINGLE WAVELENGTH M x-ray 1.5418 1 1.0 ROTATING ANODE Cu ELLIOTT GX-21 40 14317.133 HEN EGG WHITE LYSOZYME 3.2.1.17 1 man polymer 18.015 water 185 nat water no no KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGVLQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGVLQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n chicken Gallus sample 9031 EGG Gallus gallus 2.06 40.27 diffrn diffrn_detector diffrn_radiation diffrn_source pdbx_database_status software struct_ref_seq_dif diffrn_detector diffrn_source repository Initial release Version format compliance Version format compliance Data collection Database references Other Refinement description Data collection 1 0 1993-10-31 1 1 2008-03-24 1 2 2011-07-13 1 3 2020-07-22 1 4 2021-06-30 _diffrn.ambient_pressure _diffrn.ambient_temp _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.pdbx_wavelength_list _pdbx_database_status.process_site _pdbx_database_status.status_code_sf _struct_ref_seq_dif.details _diffrn_detector.detector _diffrn_source.source Y BNL 1992-01-10 REL REL HOH water HOH 1 2 HOH HOH 130 A HOH 2 2 HOH HOH 131 A HOH 3 2 HOH HOH 132 A HOH 4 2 HOH HOH 133 A HOH 5 2 HOH HOH 134 A HOH 6 2 HOH HOH 135 A HOH 7 2 HOH HOH 136 A HOH 8 2 HOH HOH 137 A HOH 9 2 HOH HOH 138 A HOH 10 2 HOH HOH 139 A HOH 11 2 HOH HOH 140 A HOH 12 2 HOH HOH 141 A HOH 13 2 HOH HOH 142 A HOH 14 2 HOH HOH 143 A HOH 15 2 HOH HOH 144 A HOH 16 2 HOH HOH 145 A HOH 17 2 HOH HOH 146 A HOH 18 2 HOH HOH 147 A HOH 19 2 HOH HOH 148 A HOH 20 2 HOH HOH 149 A HOH 21 2 HOH HOH 150 A HOH 22 2 HOH HOH 151 A HOH 23 2 HOH HOH 152 A HOH 24 2 HOH HOH 153 A HOH 25 2 HOH HOH 154 A HOH 26 2 HOH HOH 155 A HOH 27 2 HOH HOH 156 A HOH 28 2 HOH HOH 157 A HOH 29 2 HOH HOH 158 A HOH 30 2 HOH HOH 159 A HOH 31 2 HOH HOH 160 A HOH 32 2 HOH HOH 161 A HOH 33 2 HOH HOH 162 A HOH 34 2 HOH HOH 163 A HOH 35 2 HOH HOH 164 A HOH 36 2 HOH HOH 165 A HOH 37 2 HOH HOH 166 A HOH 38 2 HOH HOH 167 A HOH 39 2 HOH HOH 168 A HOH 40 2 HOH HOH 169 A HOH 41 2 HOH HOH 170 A HOH 42 2 HOH HOH 171 A HOH 43 2 HOH HOH 172 A HOH 44 2 HOH HOH 173 A HOH 45 2 HOH HOH 174 A HOH 46 2 HOH HOH 175 A HOH 47 2 HOH HOH 176 A HOH 48 2 HOH HOH 177 A HOH 49 2 HOH HOH 178 A HOH 50 2 HOH HOH 179 A HOH 51 2 HOH HOH 180 A HOH 52 2 HOH HOH 181 A HOH 53 2 HOH HOH 182 A HOH 54 2 HOH HOH 183 A HOH 55 2 HOH HOH 184 A HOH 56 2 HOH HOH 185 A HOH 57 2 HOH HOH 186 A HOH 58 2 HOH HOH 187 A HOH 59 2 HOH HOH 188 A HOH 60 2 HOH HOH 189 A HOH 61 2 HOH HOH 190 A HOH 62 2 HOH HOH 191 A HOH 63 2 HOH HOH 192 A HOH 64 2 HOH HOH 193 A HOH 65 2 HOH HOH 194 A HOH 66 2 HOH HOH 195 A HOH 67 2 HOH HOH 196 A HOH 68 2 HOH HOH 197 A HOH 69 2 HOH HOH 198 A HOH 70 2 HOH HOH 199 A HOH 71 2 HOH HOH 200 A HOH 72 2 HOH HOH 201 A HOH 73 2 HOH HOH 202 A HOH 74 2 HOH HOH 203 A HOH 75 2 HOH HOH 204 A HOH 76 2 HOH HOH 205 A HOH 77 2 HOH HOH 206 A HOH 78 2 HOH HOH 207 A HOH 79 2 HOH HOH 208 A HOH 80 2 HOH HOH 209 A HOH 81 2 HOH HOH 210 A HOH 82 2 HOH HOH 211 A HOH 83 2 HOH HOH 212 A HOH 84 2 HOH HOH 213 A HOH 85 2 HOH HOH 214 A HOH 86 2 HOH HOH 215 A HOH 87 2 HOH HOH 216 A HOH 88 2 HOH HOH 217 A HOH 89 2 HOH HOH 218 A HOH 90 2 HOH HOH 219 A HOH 91 2 HOH HOH 220 A HOH 92 2 HOH HOH 221 A HOH 93 2 HOH HOH 222 A HOH 94 2 HOH HOH 223 A HOH 95 2 HOH HOH 224 A HOH 96 2 HOH HOH 225 A HOH 97 2 HOH HOH 226 A HOH 98 2 HOH HOH 227 A HOH 99 2 HOH HOH 228 A HOH 100 2 HOH HOH 229 A HOH 101 2 HOH HOH 230 A HOH 102 2 HOH HOH 231 A HOH 103 2 HOH HOH 232 A HOH 104 2 HOH HOH 233 A HOH 105 2 HOH HOH 234 A HOH 106 2 HOH HOH 235 A HOH 107 2 HOH HOH 236 A HOH 108 2 HOH HOH 237 A HOH 109 2 HOH HOH 238 A HOH 110 2 HOH HOH 239 A HOH 111 2 HOH HOH 240 A HOH 112 2 HOH HOH 241 A HOH 113 2 HOH HOH 242 A HOH 114 2 HOH HOH 243 A HOH 115 2 HOH HOH 244 A HOH 116 2 HOH HOH 245 A HOH 117 2 HOH HOH 246 A HOH 118 2 HOH HOH 247 A HOH 119 2 HOH HOH 248 A HOH 120 2 HOH HOH 249 A HOH 121 2 HOH HOH 250 A HOH 122 2 HOH HOH 251 A HOH 123 2 HOH HOH 252 A HOH 124 2 HOH HOH 253 A HOH 125 2 HOH HOH 254 A HOH 126 2 HOH HOH 255 A HOH 127 2 HOH HOH 256 A HOH 128 2 HOH HOH 257 A HOH 129 2 HOH HOH 258 A HOH 130 2 HOH HOH 259 A HOH 131 2 HOH HOH 260 A HOH 132 2 HOH HOH 261 A HOH 133 2 HOH HOH 262 A HOH 134 2 HOH HOH 263 A HOH 135 2 HOH HOH 264 A HOH 136 2 HOH HOH 265 A HOH 137 2 HOH HOH 266 A HOH 138 2 HOH HOH 267 A HOH 139 2 HOH HOH 268 A HOH 140 2 HOH HOH 269 A HOH 141 2 HOH HOH 270 A HOH 142 2 HOH HOH 271 A HOH 143 2 HOH HOH 272 A HOH 144 2 HOH HOH 273 A HOH 145 2 HOH HOH 274 A HOH 146 2 HOH HOH 275 A HOH 147 2 HOH HOH 276 A HOH 148 2 HOH HOH 277 A HOH 149 2 HOH HOH 278 A HOH 150 2 HOH HOH 279 A HOH 151 2 HOH HOH 280 A HOH 152 2 HOH HOH 281 A HOH 153 2 HOH HOH 282 A HOH 154 2 HOH HOH 283 A HOH 155 2 HOH HOH 284 A HOH 156 2 HOH HOH 285 A HOH 157 2 HOH HOH 286 A HOH 158 2 HOH HOH 287 A HOH 159 2 HOH HOH 288 A HOH 160 2 HOH HOH 289 A HOH 161 2 HOH HOH 290 A HOH 162 2 HOH HOH 291 A HOH 163 2 HOH HOH 292 A HOH 164 2 HOH HOH 293 A HOH 165 2 HOH HOH 294 A HOH 166 2 HOH HOH 295 A HOH 167 2 HOH HOH 296 A HOH 168 2 HOH HOH 297 A HOH 169 2 HOH HOH 298 A HOH 170 2 HOH HOH 299 A HOH 171 2 HOH HOH 300 A HOH 172 2 HOH HOH 301 A HOH 173 2 HOH HOH 302 A HOH 174 2 HOH HOH 303 A HOH 175 2 HOH HOH 304 A HOH 176 2 HOH HOH 305 A HOH 177 2 HOH HOH 306 A HOH 178 2 HOH HOH 307 A HOH 179 2 HOH HOH 308 A HOH 180 2 HOH HOH 309 A HOH 181 2 HOH HOH 310 A HOH 182 2 HOH HOH 311 A HOH 183 2 HOH HOH 312 A HOH 184 2 HOH HOH 313 A HOH 185 2 HOH HOH 314 A LYS 1 n 1 LYS 1 A VAL 2 n 2 VAL 2 A PHE 3 n 3 PHE 3 A GLY 4 n 4 GLY 4 A ARG 5 n 5 ARG 5 A CYS 6 n 6 CYS 6 A GLU 7 n 7 GLU 7 A LEU 8 n 8 LEU 8 A ALA 9 n 9 ALA 9 A ALA 10 n 10 ALA 10 A ALA 11 n 11 ALA 11 A MET 12 n 12 MET 12 A LYS 13 n 13 LYS 13 A ARG 14 n 14 ARG 14 A HIS 15 n 15 HIS 15 A GLY 16 n 16 GLY 16 A LEU 17 n 17 LEU 17 A ASP 18 n 18 ASP 18 A ASN 19 n 19 ASN 19 A TYR 20 n 20 TYR 20 A ARG 21 n 21 ARG 21 A GLY 22 n 22 GLY 22 A TYR 23 n 23 TYR 23 A SER 24 n 24 SER 24 A LEU 25 n 25 LEU 25 A GLY 26 n 26 GLY 26 A ASN 27 n 27 ASN 27 A TRP 28 n 28 TRP 28 A VAL 29 n 29 VAL 29 A CYS 30 n 30 CYS 30 A ALA 31 n 31 ALA 31 A ALA 32 n 32 ALA 32 A LYS 33 n 33 LYS 33 A PHE 34 n 34 PHE 34 A GLU 35 n 35 GLU 35 A SER 36 n 36 SER 36 A ASN 37 n 37 ASN 37 A PHE 38 n 38 PHE 38 A ASN 39 n 39 ASN 39 A THR 40 n 40 THR 40 A GLN 41 n 41 GLN 41 A ALA 42 n 42 ALA 42 A THR 43 n 43 THR 43 A ASN 44 n 44 ASN 44 A ARG 45 n 45 ARG 45 A ASN 46 n 46 ASN 46 A THR 47 n 47 THR 47 A ASP 48 n 48 ASP 48 A GLY 49 n 49 GLY 49 A SER 50 n 50 SER 50 A THR 51 n 51 THR 51 A ASP 52 n 52 ASP 52 A TYR 53 n 53 TYR 53 A GLY 54 n 54 GLY 54 A VAL 55 n 55 VAL 55 A LEU 56 n 56 LEU 56 A GLN 57 n 57 GLN 57 A ILE 58 n 58 ILE 58 A ASN 59 n 59 ASN 59 A SER 60 n 60 SER 60 A ARG 61 n 61 ARG 61 A TRP 62 n 62 TRP 62 A TRP 63 n 63 TRP 63 A CYS 64 n 64 CYS 64 A ASN 65 n 65 ASN 65 A ASP 66 n 66 ASP 66 A GLY 67 n 67 GLY 67 A ARG 68 n 68 ARG 68 A THR 69 n 69 THR 69 A PRO 70 n 70 PRO 70 A GLY 71 n 71 GLY 71 A SER 72 n 72 SER 72 A ARG 73 n 73 ARG 73 A ASN 74 n 74 ASN 74 A LEU 75 n 75 LEU 75 A CYS 76 n 76 CYS 76 A ASN 77 n 77 ASN 77 A ILE 78 n 78 ILE 78 A PRO 79 n 79 PRO 79 A CYS 80 n 80 CYS 80 A SER 81 n 81 SER 81 A ALA 82 n 82 ALA 82 A LEU 83 n 83 LEU 83 A LEU 84 n 84 LEU 84 A SER 85 n 85 SER 85 A SER 86 n 86 SER 86 A ASP 87 n 87 ASP 87 A ILE 88 n 88 ILE 88 A THR 89 n 89 THR 89 A ALA 90 n 90 ALA 90 A SER 91 n 91 SER 91 A VAL 92 n 92 VAL 92 A ASN 93 n 93 ASN 93 A CYS 94 n 94 CYS 94 A ALA 95 n 95 ALA 95 A LYS 96 n 96 LYS 96 A LYS 97 n 97 LYS 97 A ILE 98 n 98 ILE 98 A VAL 99 n 99 VAL 99 A SER 100 n 100 SER 100 A ASP 101 n 101 ASP 101 A GLY 102 n 102 GLY 102 A ASN 103 n 103 ASN 103 A GLY 104 n 104 GLY 104 A MET 105 n 105 MET 105 A ASN 106 n 106 ASN 106 A ALA 107 n 107 ALA 107 A TRP 108 n 108 TRP 108 A VAL 109 n 109 VAL 109 A ALA 110 n 110 ALA 110 A TRP 111 n 111 TRP 111 A ARG 112 n 112 ARG 112 A ASN 113 n 113 ASN 113 A ARG 114 n 114 ARG 114 A CYS 115 n 115 CYS 115 A LYS 116 n 116 LYS 116 A GLY 117 n 117 GLY 117 A THR 118 n 118 THR 118 A ASP 119 n 119 ASP 119 A VAL 120 n 120 VAL 120 A GLN 121 n 121 GLN 121 A ALA 122 n 122 ALA 122 A TRP 123 n 123 TRP 123 A ILE 124 n 124 ILE 124 A ARG 125 n 125 ARG 125 A GLY 126 n 126 GLY 126 A CYS 127 n 127 CYS 127 A ARG 128 n 128 ARG 128 A LEU 129 n 129 LEU 129 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ASN 46 A N ASN 46 A O SER 50 A O SER 50 A N THR 51 A N THR 51 A O SER 60 A O SER 60 1 5.11 0.50 120.30 125.41 A A A NE CZ NH1 ARG ARG ARG 5 5 5 N 1 -3.25 0.50 120.30 117.05 A A A NE CZ NH2 ARG ARG ARG 14 14 14 N 1 8.43 0.90 118.30 126.73 A A A CB CG OD1 ASP ASP ASP 18 18 18 N 1 -7.58 0.90 118.30 110.72 A A A CB CG OD2 ASP ASP ASP 18 18 18 N 1 3.76 0.50 120.30 124.06 A A A NE CZ NH1 ARG ARG ARG 45 45 45 N 1 -3.32 0.50 120.30 116.98 A A A NE CZ NH2 ARG ARG ARG 45 45 45 N 1 5.11 0.50 120.30 125.41 A A A NE CZ NH1 ARG ARG ARG 61 61 61 N 1 -4.73 0.50 120.30 115.57 A A A NE CZ NH2 ARG ARG ARG 61 61 61 N 1 8.02 0.90 118.30 126.32 A A A CB CG OD1 ASP ASP ASP 66 66 66 N 1 -9.59 0.90 118.30 108.71 A A A CB CG OD2 ASP ASP ASP 66 66 66 N 1 6.53 0.90 118.30 124.83 A A A CB CG OD1 ASP ASP ASP 87 87 87 N 1 -6.20 0.90 118.30 112.10 A A A CB CG OD2 ASP ASP ASP 87 87 87 N 1 -3.10 0.50 120.30 117.20 A A A NE CZ NH2 ARG ARG ARG 112 112 112 N 1 5.77 0.90 118.30 124.07 A A A CB CG OD1 ASP ASP ASP 119 119 119 N 1 -6.51 0.90 118.30 111.79 A A A CB CG OD2 ASP ASP ASP 119 119 119 N 1 A A O O HOH HOH 270 270 0.57 1_555 8_555 1 A A O O HOH HOH 313 313 0.71 1_555 7_557 1 A A O O HOH HOH 202 202 1.54 1_555 7_556 1 A ARG 68 -141.44 25.34 0.16 1.8 1 1.8 185 1185 0 0 1000 0.018 2.5 refinement TNT data scaling AGROVATA / ROTAVATA LYSOZYME (E.C.3.2.1.17) MUTANT WITH ILE 55 REPLACED BY VAL (I55V) STRUCTURAL AND THERMODYNAMIC ANALYSIS OF COMPENSATING MUTATIONS WITHIN THE CORE OF CHICKEN EGG WHITE LYSOZYME 1 N N 2 N N A GLY 4 A GLY 4 HELX_P A GLY 16 A GLY 16 1 H1 13 A LEU 25 A LEU 25 HELX_P A PHE 34 A PHE 34 1 H2 10 A PRO 79 A PRO 79 HELX_P A LEU 84 A LEU 84 5 H3 6 A ILE 88 A ILE 88 HELX_P A SER 100 A SER 100 1 H4 13 A GLY 104 A GLY 104 HELX_P A TRP 108 A TRP 108 5 H5 5 A VAL 109 A VAL 109 HELX_P A ARG 114 A ARG 114 1 H6 6 A VAL 120 A VAL 120 HELX_P A ILE 124 A ILE 124 5 H7 5 disulf 1.970 A CYS 6 A SG CYS 6 1_555 A CYS 127 A SG CYS 127 1_555 disulf 2.129 A CYS 30 A SG CYS 30 1_555 A CYS 115 A SG CYS 115 1_555 disulf 1.974 A CYS 64 A SG CYS 64 1_555 A CYS 80 A SG CYS 80 1_555 disulf 2.065 A CYS 76 A SG CYS 76 1_555 A CYS 94 A SG CYS 94 1_555 HYDROLASE(O-GLYCOSYL) HYDROLASE(O-GLYCOSYL) LYSC_CHICK UNP 1 1 P00698 MRSLLILVLCFLPLAALGKVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRW WCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL 19 147 1HEO 1 129 P00698 A 1 1 129 1 ILE conflict VAL 55 1HEO A P00698 UNP 73 55 3 anti-parallel anti-parallel A ALA 42 A ALA 42 A ASN 46 A ASN 46 A GLY 49 A GLY 49 A GLY 54 A GLY 54 A LEU 56 A LEU 56 A SER 60 A SER 60 96 P 43 21 2