0.012681 0.000000 0.000000 0.000000 0.012681 0.000000 0.000000 0.000000 0.026144 0.00000 0.00000 0.00000 Cheetham, J.C. Artymiuk, P.J. Phillips, D.C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 78.860 78.860 38.250 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose D-saccharide, beta linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 224 613 628 10.1016/0022-2836(92)90548-X 1569548 Refinement of an enzyme complex with inhibitor bound at partial occupancy. Hen egg-white lysozyme and tri-N-acetylchitotriose at 1.75 A resolution. 1992 GW Curr.Top.Microbiol.Immunol. CTMIA3 0761 0070-217X 139 81 Protein-Oligosaccharide Interactions: Lysozyme, Phosphorylase, Amylases 1988 UK Proc.R.Soc.London,Ser.B PRLBA4 0338 0080-4649 167 378 Crystallographic Studies of the Activity of Hen Egg-White Lysozyme 1967 UK Proc.R.Soc.London,Ser.B PRLBA4 0338 0080-4649 167 365 On the Conformation of the Hen Egg-White Lysozyme Molecule 1967 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 x-ray 1 1.0 14331.160 HEN EGG WHITE LYSOZYME 3.2.1.17 1 man polymer 627.594 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose 1 man branched 18.015 water 103 nat water triacetyl-beta-chitotriose no no KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n chicken EGG WHITE sample 9031 Gallus gallus 2.07 40.71 pdbx_database_status struct_conf struct_conf_type atom_site chem_comp entity entity_name_com pdbx_branch_scheme pdbx_chem_comp_identifier pdbx_entity_branch pdbx_entity_branch_descriptor pdbx_entity_branch_link pdbx_entity_branch_list pdbx_entity_nonpoly pdbx_molecule_features pdbx_nonpoly_scheme pdbx_struct_assembly_gen struct_asym struct_conn struct_site struct_site_gen repository Initial release Carbohydrate remediation repository Remediation Version format compliance Non-polymer description Version format compliance Derived calculations Other Atomic model Data collection Derived calculations Structure summary 1 0 1994-01-31 1 1 2008-03-24 1 2 2011-07-13 1 3 2017-11-29 2 0 2020-07-29 _pdbx_database_status.process_site _atom_site.auth_asym_id _atom_site.auth_seq_id _atom_site.label_asym_id _chem_comp.name _chem_comp.type _entity.formula_weight _entity.pdbx_description _entity.pdbx_number_of_molecules _entity.type _pdbx_struct_assembly_gen.asym_id_list _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id NAG 201 n B NAG 1 NAG 202 n B NAG 2 NAG 203 n B NAG 3 DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc Y BNL 1992-01-20 REL oligosaccharide DGlcpNAcb1-4DGlcpNAcb1-4DGlcpNAcb1-ROH 2 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/1,3,2/[a2122h-1b_1-5_2*NCC/3=O]/1-1-1/a4-b1_b4-c1 2 PDB2Glycan 1.1.0 WURCS [][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}} 2 PDB-CARE LINUCS C1 O4 NAG NAG 2 1 2 O1 HO4 sing C1 O4 NAG NAG 3 2 2 O1 HO4 sing n n n HOH water Inhibitor oligosaccharide triacetyl-beta-chitotriose Oligosaccharide HOH 1 3 HOH HOH 204 A HOH 2 3 HOH HOH 205 A HOH 3 3 HOH HOH 206 A HOH 4 3 HOH HOH 207 A HOH 5 3 HOH HOH 208 A HOH 6 3 HOH HOH 209 A HOH 7 3 HOH HOH 210 A HOH 8 3 HOH HOH 211 A HOH 9 3 HOH HOH 212 A HOH 10 3 HOH HOH 213 A HOH 11 3 HOH HOH 214 A HOH 12 3 HOH HOH 215 A HOH 13 3 HOH HOH 216 A HOH 14 3 HOH HOH 217 A HOH 15 3 HOH HOH 218 A HOH 16 3 HOH HOH 219 A HOH 17 3 HOH HOH 220 A HOH 18 3 HOH HOH 221 A HOH 19 3 HOH HOH 222 A HOH 20 3 HOH HOH 223 A HOH 21 3 HOH HOH 224 A HOH 22 3 HOH HOH 225 A HOH 23 3 HOH HOH 226 A HOH 24 3 HOH HOH 227 A HOH 25 3 HOH HOH 228 A HOH 26 3 HOH HOH 229 A HOH 27 3 HOH HOH 230 A HOH 28 3 HOH HOH 231 A HOH 29 3 HOH HOH 232 A HOH 30 3 HOH HOH 233 A HOH 31 3 HOH HOH 234 A HOH 32 3 HOH HOH 235 A HOH 33 3 HOH HOH 236 A HOH 34 3 HOH HOH 237 A HOH 35 3 HOH HOH 238 A HOH 36 3 HOH HOH 239 A HOH 37 3 HOH HOH 240 A HOH 38 3 HOH HOH 241 A HOH 39 3 HOH HOH 242 A HOH 40 3 HOH HOH 243 A HOH 41 3 HOH HOH 244 A HOH 42 3 HOH HOH 245 A HOH 43 3 HOH HOH 246 A HOH 44 3 HOH HOH 247 A HOH 45 3 HOH HOH 248 A HOH 46 3 HOH HOH 249 A HOH 47 3 HOH HOH 250 A HOH 48 3 HOH HOH 251 A HOH 49 3 HOH HOH 252 A HOH 50 3 HOH HOH 253 A HOH 51 3 HOH HOH 254 A HOH 52 3 HOH HOH 255 A HOH 53 3 HOH HOH 256 A HOH 54 3 HOH HOH 257 A HOH 55 3 HOH HOH 258 A HOH 56 3 HOH HOH 259 A HOH 57 3 HOH HOH 260 A HOH 58 3 HOH HOH 261 A HOH 59 3 HOH HOH 262 A HOH 60 3 HOH HOH 263 A HOH 61 3 HOH HOH 264 A HOH 62 3 HOH HOH 265 A HOH 63 3 HOH HOH 266 A HOH 64 3 HOH HOH 267 A HOH 65 3 HOH HOH 268 A HOH 66 3 HOH HOH 269 A HOH 67 3 HOH HOH 270 A HOH 68 3 HOH HOH 271 A HOH 69 3 HOH HOH 272 A HOH 70 3 HOH HOH 273 A HOH 71 3 HOH HOH 274 A HOH 72 3 HOH HOH 275 A HOH 73 3 HOH HOH 276 A HOH 74 3 HOH HOH 277 A HOH 75 3 HOH HOH 278 A HOH 76 3 HOH HOH 279 A HOH 77 3 HOH HOH 280 A HOH 78 3 HOH HOH 281 A HOH 79 3 HOH HOH 282 A HOH 80 3 HOH HOH 283 A HOH 81 3 HOH HOH 284 A HOH 82 3 HOH HOH 285 A HOH 83 3 HOH HOH 286 A HOH 84 3 HOH HOH 287 A HOH 85 3 HOH HOH 288 A HOH 86 3 HOH HOH 289 A HOH 87 3 HOH HOH 290 A HOH 88 3 HOH HOH 291 A HOH 89 3 HOH HOH 292 A HOH 90 3 HOH HOH 293 A HOH 91 3 HOH HOH 294 A HOH 92 3 HOH HOH 295 A HOH 93 3 HOH HOH 296 A HOH 94 3 HOH HOH 297 A HOH 95 3 HOH HOH 298 A HOH 96 3 HOH HOH 299 A HOH 97 3 HOH HOH 300 A HOH 98 3 HOH HOH 301 A HOH 99 3 HOH HOH 302 A HOH 100 3 HOH HOH 303 A HOH 101 3 HOH HOH 304 A HOH 102 3 HOH HOH 305 A HOH 103 3 HOH HOH 306 A LYS 1 n 1 LYS 1 A VAL 2 n 2 VAL 2 A PHE 3 n 3 PHE 3 A GLY 4 n 4 GLY 4 A ARG 5 n 5 ARG 5 A CYS 6 n 6 CYS 6 A GLU 7 n 7 GLU 7 A LEU 8 n 8 LEU 8 A ALA 9 n 9 ALA 9 A ALA 10 n 10 ALA 10 A ALA 11 n 11 ALA 11 A MET 12 n 12 MET 12 A LYS 13 n 13 LYS 13 A ARG 14 n 14 ARG 14 A HIS 15 n 15 HIS 15 A GLY 16 n 16 GLY 16 A LEU 17 n 17 LEU 17 A ASP 18 n 18 ASP 18 A ASN 19 n 19 ASN 19 A TYR 20 n 20 TYR 20 A ARG 21 n 21 ARG 21 A GLY 22 n 22 GLY 22 A TYR 23 n 23 TYR 23 A SER 24 n 24 SER 24 A LEU 25 n 25 LEU 25 A GLY 26 n 26 GLY 26 A ASN 27 n 27 ASN 27 A TRP 28 n 28 TRP 28 A VAL 29 n 29 VAL 29 A CYS 30 n 30 CYS 30 A ALA 31 n 31 ALA 31 A ALA 32 n 32 ALA 32 A LYS 33 n 33 LYS 33 A PHE 34 n 34 PHE 34 A GLU 35 n 35 GLU 35 A SER 36 n 36 SER 36 A ASN 37 n 37 ASN 37 A PHE 38 n 38 PHE 38 A ASN 39 n 39 ASN 39 A THR 40 n 40 THR 40 A GLN 41 n 41 GLN 41 A ALA 42 n 42 ALA 42 A THR 43 n 43 THR 43 A ASN 44 n 44 ASN 44 A ARG 45 n 45 ARG 45 A ASN 46 n 46 ASN 46 A THR 47 n 47 THR 47 A ASP 48 n 48 ASP 48 A GLY 49 n 49 GLY 49 A SER 50 n 50 SER 50 A THR 51 n 51 THR 51 A ASP 52 n 52 ASP 52 A TYR 53 n 53 TYR 53 A GLY 54 n 54 GLY 54 A ILE 55 n 55 ILE 55 A LEU 56 n 56 LEU 56 A GLN 57 n 57 GLN 57 A ILE 58 n 58 ILE 58 A ASN 59 n 59 ASN 59 A SER 60 n 60 SER 60 A ARG 61 n 61 ARG 61 A TRP 62 n 62 TRP 62 A TRP 63 n 63 TRP 63 A CYS 64 n 64 CYS 64 A ASN 65 n 65 ASN 65 A ASP 66 n 66 ASP 66 A GLY 67 n 67 GLY 67 A ARG 68 n 68 ARG 68 A THR 69 n 69 THR 69 A PRO 70 n 70 PRO 70 A GLY 71 n 71 GLY 71 A SER 72 n 72 SER 72 A ARG 73 n 73 ARG 73 A ASN 74 n 74 ASN 74 A LEU 75 n 75 LEU 75 A CYS 76 n 76 CYS 76 A ASN 77 n 77 ASN 77 A ILE 78 n 78 ILE 78 A PRO 79 n 79 PRO 79 A CYS 80 n 80 CYS 80 A SER 81 n 81 SER 81 A ALA 82 n 82 ALA 82 A LEU 83 n 83 LEU 83 A LEU 84 n 84 LEU 84 A SER 85 n 85 SER 85 A SER 86 n 86 SER 86 A ASP 87 n 87 ASP 87 A ILE 88 n 88 ILE 88 A THR 89 n 89 THR 89 A ALA 90 n 90 ALA 90 A SER 91 n 91 SER 91 A VAL 92 n 92 VAL 92 A ASN 93 n 93 ASN 93 A CYS 94 n 94 CYS 94 A ALA 95 n 95 ALA 95 A LYS 96 n 96 LYS 96 A LYS 97 n 97 LYS 97 A ILE 98 n 98 ILE 98 A VAL 99 n 99 VAL 99 A SER 100 n 100 SER 100 A ASP 101 n 101 ASP 101 A GLY 102 n 102 GLY 102 A ASN 103 n 103 ASN 103 A GLY 104 n 104 GLY 104 A MET 105 n 105 MET 105 A ASN 106 n 106 ASN 106 A ALA 107 n 107 ALA 107 A TRP 108 n 108 TRP 108 A VAL 109 n 109 VAL 109 A ALA 110 n 110 ALA 110 A TRP 111 n 111 TRP 111 A ARG 112 n 112 ARG 112 A ASN 113 n 113 ASN 113 A ARG 114 n 114 ARG 114 A CYS 115 n 115 CYS 115 A LYS 116 n 116 LYS 116 A GLY 117 n 117 GLY 117 A THR 118 n 118 THR 118 A ASP 119 n 119 ASP 119 A VAL 120 n 120 VAL 120 A GLN 121 n 121 GLN 121 A ALA 122 n 122 ALA 122 A TRP 123 n 123 TRP 123 A ILE 124 n 124 ILE 124 A ARG 125 n 125 ARG 125 A GLY 126 n 126 GLY 126 A CYS 127 n 127 CYS 127 A ARG 128 n 128 ARG 128 A LEU 129 n 129 LEU 129 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O LYS 1 A O LYS 1 A N THR 40 A N THR 40 A N ASN 46 A N ASN 46 A O SER 50 A O SER 50 A N TYR 53 A N TYR 53 A O ILE 58 A O ILE 58 1 A ARG 45 0.156 SIDE CHAIN 1 A ARG 128 0.137 SIDE CHAIN 1 9.82 1.60 122.70 132.52 A A A O C N ASP ASP ASN 18 18 19 Y 1 3.69 0.50 120.30 123.99 A A A NE CZ NH2 ARG ARG ARG 21 21 21 N 1 12.70 1.90 110.30 123.00 A A A N CA CB THR THR THR 47 47 47 N 1 -11.55 1.40 112.40 100.85 A A A CA CB CG2 THR THR THR 47 47 47 N 1 3.76 0.50 120.30 124.06 A A A NE CZ NH2 ARG ARG ARG 61 61 61 N 1 6.58 0.90 118.30 124.88 A A A CB CG OD1 ASP ASP ASP 66 66 66 N 1 19.40 1.60 122.70 142.10 A A A O C N GLY GLY SER 71 71 72 Y 1 3.35 0.50 120.30 123.65 A A A NE CZ NH1 ARG ARG ARG 73 73 73 N 1 23.51 2.20 113.40 136.91 A A A CA CB CG ARG ARG ARG 125 125 125 N 1 3.27 0.50 120.30 123.57 A A A NE CZ NH1 ARG ARG ARG 125 125 125 N 1 A A C O GLY GLY 71 71 0.126 0.016 1.232 1.358 N 1 A A C N GLY SER 71 72 0.173 0.023 1.336 1.509 Y 1 A A O O HOH HOH 253 283 1.92 1_555 3_554 1 A A O NH1 LYS ARG 13 128 2.09 1_555 8_555 1 A A CA NH2 GLY ARG 16 128 2.10 1_555 8_555 1 A A NH2 O ARG HOH 45 245 2.14 1_555 7_556 1 A GLN 57 38.46 61.22 1 A PRO 70 -52.96 -93.97 0.229 1.75 12579 1 1.75 103 1147 43 0 1001 0.021 refinement PROLSQ LYSOZYME (E.C.3.2.1.17) COMPLEXED WITH THE INHIBITOR TRI-N-ACETYLCHITOTRIOSE REFINEMENT OF AN ENZYME COMPLEX WITH INHIBITOR BOUND AT PARTIAL OCCUPANCY. HEN EGG-WHITE LYSOZYME AND TRI-N-ACETYLCHITOTRIOSE AT 1.75 ANGSTROMS RESOLUTION 1 N N 2 N N 3 N N A ARG 5 A ARG 5 HELX_P A HIS 15 A HIS 15 1 A 11 A LEU 25 A LEU 25 HELX_P A GLU 35 A GLU 35 1 B 11 A CYS 80 A CYS 80 HELX_P A LEU 84 A LEU 84 5 C 5 A THR 89 A THR 89 HELX_P A ILE 98 A ILE 98 1 D 10 A VAL 109 A VAL 109 HELX_P A ASN 113 A ASN 113 1 E 5 disulf 2.086 A CYS 6 A SG CYS 6 1_555 A CYS 127 A SG CYS 127 1_555 disulf 2.081 A CYS 30 A SG CYS 30 1_555 A CYS 115 A SG CYS 115 1_555 disulf 2.114 A CYS 64 A SG CYS 64 1_555 A CYS 80 A SG CYS 80 1_555 disulf 2.090 A CYS 76 A SG CYS 76 1_555 A CYS 94 A SG CYS 94 1_555 covale 1.476 both B NAG 1 B O4 NAG 1_555 B NAG 2 B C1 NAG 1_555 covale 1.454 both B NAG 2 B O4 NAG 1_555 B NAG 3 B C1 NAG 1_555 HYDROLASE(O-GLYCOSYL) HYDROLASE(O-GLYCOSYL) LYC_CHICK UNP 1 1 P00698 MRSLLILVLCFLPLAALGKVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRW WCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL 19 147 1HEW 1 129 P00698 A 1 1 129 2 3 anti-parallel anti-parallel anti-parallel A LYS 1 A LYS 1 A PHE 3 A PHE 3 A PHE 38 A PHE 38 A THR 40 A THR 40 A ALA 42 A ALA 42 A ASN 46 A ASN 46 A SER 50 A SER 50 A GLY 54 A GLY 54 A GLN 57 A GLN 57 A SER 60 A SER 60 96 P 43 21 2