0.012681
0.000000
0.000000
0.000000
0.012681
0.000000
0.000000
0.000000
0.026144
0.00000
0.00000
0.00000
Cheetham, J.C.
Artymiuk, P.J.
Phillips, D.C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
78.860
78.860
38.250
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
224
613
628
10.1016/0022-2836(92)90548-X
1569548
Refinement of an enzyme complex with inhibitor bound at partial occupancy. Hen egg-white lysozyme and tri-N-acetylchitotriose at 1.75 A resolution.
1992
GW
Curr.Top.Microbiol.Immunol.
CTMIA3
0761
0070-217X
139
81
Protein-Oligosaccharide Interactions: Lysozyme, Phosphorylase, Amylases
1988
UK
Proc.R.Soc.London,Ser.B
PRLBA4
0338
0080-4649
167
378
Crystallographic Studies of the Activity of Hen Egg-White Lysozyme
1967
UK
Proc.R.Soc.London,Ser.B
PRLBA4
0338
0080-4649
167
365
On the Conformation of the Hen Egg-White Lysozyme Molecule
1967
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
14331.160
HEN EGG WHITE LYSOZYME
3.2.1.17
1
man
polymer
627.594
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1
man
branched
18.015
water
103
nat
water
triacetyl-beta-chitotriose
no
no
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC
SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC
SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
chicken
EGG WHITE
sample
9031
Gallus gallus
2.07
40.71
pdbx_database_status
struct_conf
struct_conf_type
atom_site
chem_comp
entity
entity_name_com
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_molecule_features
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
struct_asym
struct_conn
struct_site
struct_site_gen
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Non-polymer description
Version format compliance
Derived calculations
Other
Atomic model
Data collection
Derived calculations
Structure summary
1
0
1994-01-31
1
1
2008-03-24
1
2
2011-07-13
1
3
2017-11-29
2
0
2020-07-29
_pdbx_database_status.process_site
_atom_site.auth_asym_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_chem_comp.name
_chem_comp.type
_entity.formula_weight
_entity.pdbx_description
_entity.pdbx_number_of_molecules
_entity.type
_pdbx_struct_assembly_gen.asym_id_list
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
NAG
201
n
B
NAG
1
NAG
202
n
B
NAG
2
NAG
203
n
B
NAG
3
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
Y
BNL
1992-01-20
REL
oligosaccharide
DGlcpNAcb1-4DGlcpNAcb1-4DGlcpNAcb1-ROH
2
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/1,3,2/[a2122h-1b_1-5_2*NCC/3=O]/1-1-1/a4-b1_b4-c1
2
PDB2Glycan
1.1.0
WURCS
[][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}
2
PDB-CARE
LINUCS
C1
O4
NAG
NAG
2
1
2
O1
HO4
sing
C1
O4
NAG
NAG
3
2
2
O1
HO4
sing
n
n
n
HOH
water
Inhibitor
oligosaccharide
triacetyl-beta-chitotriose
Oligosaccharide
HOH
1
3
HOH
HOH
204
A
HOH
2
3
HOH
HOH
205
A
HOH
3
3
HOH
HOH
206
A
HOH
4
3
HOH
HOH
207
A
HOH
5
3
HOH
HOH
208
A
HOH
6
3
HOH
HOH
209
A
HOH
7
3
HOH
HOH
210
A
HOH
8
3
HOH
HOH
211
A
HOH
9
3
HOH
HOH
212
A
HOH
10
3
HOH
HOH
213
A
HOH
11
3
HOH
HOH
214
A
HOH
12
3
HOH
HOH
215
A
HOH
13
3
HOH
HOH
216
A
HOH
14
3
HOH
HOH
217
A
HOH
15
3
HOH
HOH
218
A
HOH
16
3
HOH
HOH
219
A
HOH
17
3
HOH
HOH
220
A
HOH
18
3
HOH
HOH
221
A
HOH
19
3
HOH
HOH
222
A
HOH
20
3
HOH
HOH
223
A
HOH
21
3
HOH
HOH
224
A
HOH
22
3
HOH
HOH
225
A
HOH
23
3
HOH
HOH
226
A
HOH
24
3
HOH
HOH
227
A
HOH
25
3
HOH
HOH
228
A
HOH
26
3
HOH
HOH
229
A
HOH
27
3
HOH
HOH
230
A
HOH
28
3
HOH
HOH
231
A
HOH
29
3
HOH
HOH
232
A
HOH
30
3
HOH
HOH
233
A
HOH
31
3
HOH
HOH
234
A
HOH
32
3
HOH
HOH
235
A
HOH
33
3
HOH
HOH
236
A
HOH
34
3
HOH
HOH
237
A
HOH
35
3
HOH
HOH
238
A
HOH
36
3
HOH
HOH
239
A
HOH
37
3
HOH
HOH
240
A
HOH
38
3
HOH
HOH
241
A
HOH
39
3
HOH
HOH
242
A
HOH
40
3
HOH
HOH
243
A
HOH
41
3
HOH
HOH
244
A
HOH
42
3
HOH
HOH
245
A
HOH
43
3
HOH
HOH
246
A
HOH
44
3
HOH
HOH
247
A
HOH
45
3
HOH
HOH
248
A
HOH
46
3
HOH
HOH
249
A
HOH
47
3
HOH
HOH
250
A
HOH
48
3
HOH
HOH
251
A
HOH
49
3
HOH
HOH
252
A
HOH
50
3
HOH
HOH
253
A
HOH
51
3
HOH
HOH
254
A
HOH
52
3
HOH
HOH
255
A
HOH
53
3
HOH
HOH
256
A
HOH
54
3
HOH
HOH
257
A
HOH
55
3
HOH
HOH
258
A
HOH
56
3
HOH
HOH
259
A
HOH
57
3
HOH
HOH
260
A
HOH
58
3
HOH
HOH
261
A
HOH
59
3
HOH
HOH
262
A
HOH
60
3
HOH
HOH
263
A
HOH
61
3
HOH
HOH
264
A
HOH
62
3
HOH
HOH
265
A
HOH
63
3
HOH
HOH
266
A
HOH
64
3
HOH
HOH
267
A
HOH
65
3
HOH
HOH
268
A
HOH
66
3
HOH
HOH
269
A
HOH
67
3
HOH
HOH
270
A
HOH
68
3
HOH
HOH
271
A
HOH
69
3
HOH
HOH
272
A
HOH
70
3
HOH
HOH
273
A
HOH
71
3
HOH
HOH
274
A
HOH
72
3
HOH
HOH
275
A
HOH
73
3
HOH
HOH
276
A
HOH
74
3
HOH
HOH
277
A
HOH
75
3
HOH
HOH
278
A
HOH
76
3
HOH
HOH
279
A
HOH
77
3
HOH
HOH
280
A
HOH
78
3
HOH
HOH
281
A
HOH
79
3
HOH
HOH
282
A
HOH
80
3
HOH
HOH
283
A
HOH
81
3
HOH
HOH
284
A
HOH
82
3
HOH
HOH
285
A
HOH
83
3
HOH
HOH
286
A
HOH
84
3
HOH
HOH
287
A
HOH
85
3
HOH
HOH
288
A
HOH
86
3
HOH
HOH
289
A
HOH
87
3
HOH
HOH
290
A
HOH
88
3
HOH
HOH
291
A
HOH
89
3
HOH
HOH
292
A
HOH
90
3
HOH
HOH
293
A
HOH
91
3
HOH
HOH
294
A
HOH
92
3
HOH
HOH
295
A
HOH
93
3
HOH
HOH
296
A
HOH
94
3
HOH
HOH
297
A
HOH
95
3
HOH
HOH
298
A
HOH
96
3
HOH
HOH
299
A
HOH
97
3
HOH
HOH
300
A
HOH
98
3
HOH
HOH
301
A
HOH
99
3
HOH
HOH
302
A
HOH
100
3
HOH
HOH
303
A
HOH
101
3
HOH
HOH
304
A
HOH
102
3
HOH
HOH
305
A
HOH
103
3
HOH
HOH
306
A
LYS
1
n
1
LYS
1
A
VAL
2
n
2
VAL
2
A
PHE
3
n
3
PHE
3
A
GLY
4
n
4
GLY
4
A
ARG
5
n
5
ARG
5
A
CYS
6
n
6
CYS
6
A
GLU
7
n
7
GLU
7
A
LEU
8
n
8
LEU
8
A
ALA
9
n
9
ALA
9
A
ALA
10
n
10
ALA
10
A
ALA
11
n
11
ALA
11
A
MET
12
n
12
MET
12
A
LYS
13
n
13
LYS
13
A
ARG
14
n
14
ARG
14
A
HIS
15
n
15
HIS
15
A
GLY
16
n
16
GLY
16
A
LEU
17
n
17
LEU
17
A
ASP
18
n
18
ASP
18
A
ASN
19
n
19
ASN
19
A
TYR
20
n
20
TYR
20
A
ARG
21
n
21
ARG
21
A
GLY
22
n
22
GLY
22
A
TYR
23
n
23
TYR
23
A
SER
24
n
24
SER
24
A
LEU
25
n
25
LEU
25
A
GLY
26
n
26
GLY
26
A
ASN
27
n
27
ASN
27
A
TRP
28
n
28
TRP
28
A
VAL
29
n
29
VAL
29
A
CYS
30
n
30
CYS
30
A
ALA
31
n
31
ALA
31
A
ALA
32
n
32
ALA
32
A
LYS
33
n
33
LYS
33
A
PHE
34
n
34
PHE
34
A
GLU
35
n
35
GLU
35
A
SER
36
n
36
SER
36
A
ASN
37
n
37
ASN
37
A
PHE
38
n
38
PHE
38
A
ASN
39
n
39
ASN
39
A
THR
40
n
40
THR
40
A
GLN
41
n
41
GLN
41
A
ALA
42
n
42
ALA
42
A
THR
43
n
43
THR
43
A
ASN
44
n
44
ASN
44
A
ARG
45
n
45
ARG
45
A
ASN
46
n
46
ASN
46
A
THR
47
n
47
THR
47
A
ASP
48
n
48
ASP
48
A
GLY
49
n
49
GLY
49
A
SER
50
n
50
SER
50
A
THR
51
n
51
THR
51
A
ASP
52
n
52
ASP
52
A
TYR
53
n
53
TYR
53
A
GLY
54
n
54
GLY
54
A
ILE
55
n
55
ILE
55
A
LEU
56
n
56
LEU
56
A
GLN
57
n
57
GLN
57
A
ILE
58
n
58
ILE
58
A
ASN
59
n
59
ASN
59
A
SER
60
n
60
SER
60
A
ARG
61
n
61
ARG
61
A
TRP
62
n
62
TRP
62
A
TRP
63
n
63
TRP
63
A
CYS
64
n
64
CYS
64
A
ASN
65
n
65
ASN
65
A
ASP
66
n
66
ASP
66
A
GLY
67
n
67
GLY
67
A
ARG
68
n
68
ARG
68
A
THR
69
n
69
THR
69
A
PRO
70
n
70
PRO
70
A
GLY
71
n
71
GLY
71
A
SER
72
n
72
SER
72
A
ARG
73
n
73
ARG
73
A
ASN
74
n
74
ASN
74
A
LEU
75
n
75
LEU
75
A
CYS
76
n
76
CYS
76
A
ASN
77
n
77
ASN
77
A
ILE
78
n
78
ILE
78
A
PRO
79
n
79
PRO
79
A
CYS
80
n
80
CYS
80
A
SER
81
n
81
SER
81
A
ALA
82
n
82
ALA
82
A
LEU
83
n
83
LEU
83
A
LEU
84
n
84
LEU
84
A
SER
85
n
85
SER
85
A
SER
86
n
86
SER
86
A
ASP
87
n
87
ASP
87
A
ILE
88
n
88
ILE
88
A
THR
89
n
89
THR
89
A
ALA
90
n
90
ALA
90
A
SER
91
n
91
SER
91
A
VAL
92
n
92
VAL
92
A
ASN
93
n
93
ASN
93
A
CYS
94
n
94
CYS
94
A
ALA
95
n
95
ALA
95
A
LYS
96
n
96
LYS
96
A
LYS
97
n
97
LYS
97
A
ILE
98
n
98
ILE
98
A
VAL
99
n
99
VAL
99
A
SER
100
n
100
SER
100
A
ASP
101
n
101
ASP
101
A
GLY
102
n
102
GLY
102
A
ASN
103
n
103
ASN
103
A
GLY
104
n
104
GLY
104
A
MET
105
n
105
MET
105
A
ASN
106
n
106
ASN
106
A
ALA
107
n
107
ALA
107
A
TRP
108
n
108
TRP
108
A
VAL
109
n
109
VAL
109
A
ALA
110
n
110
ALA
110
A
TRP
111
n
111
TRP
111
A
ARG
112
n
112
ARG
112
A
ASN
113
n
113
ASN
113
A
ARG
114
n
114
ARG
114
A
CYS
115
n
115
CYS
115
A
LYS
116
n
116
LYS
116
A
GLY
117
n
117
GLY
117
A
THR
118
n
118
THR
118
A
ASP
119
n
119
ASP
119
A
VAL
120
n
120
VAL
120
A
GLN
121
n
121
GLN
121
A
ALA
122
n
122
ALA
122
A
TRP
123
n
123
TRP
123
A
ILE
124
n
124
ILE
124
A
ARG
125
n
125
ARG
125
A
GLY
126
n
126
GLY
126
A
CYS
127
n
127
CYS
127
A
ARG
128
n
128
ARG
128
A
LEU
129
n
129
LEU
129
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
LYS
1
A
O
LYS
1
A
N
THR
40
A
N
THR
40
A
N
ASN
46
A
N
ASN
46
A
O
SER
50
A
O
SER
50
A
N
TYR
53
A
N
TYR
53
A
O
ILE
58
A
O
ILE
58
1
A
ARG
45
0.156
SIDE CHAIN
1
A
ARG
128
0.137
SIDE CHAIN
1
9.82
1.60
122.70
132.52
A
A
A
O
C
N
ASP
ASP
ASN
18
18
19
Y
1
3.69
0.50
120.30
123.99
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
21
21
21
N
1
12.70
1.90
110.30
123.00
A
A
A
N
CA
CB
THR
THR
THR
47
47
47
N
1
-11.55
1.40
112.40
100.85
A
A
A
CA
CB
CG2
THR
THR
THR
47
47
47
N
1
3.76
0.50
120.30
124.06
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
61
61
61
N
1
6.58
0.90
118.30
124.88
A
A
A
CB
CG
OD1
ASP
ASP
ASP
66
66
66
N
1
19.40
1.60
122.70
142.10
A
A
A
O
C
N
GLY
GLY
SER
71
71
72
Y
1
3.35
0.50
120.30
123.65
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
73
73
73
N
1
23.51
2.20
113.40
136.91
A
A
A
CA
CB
CG
ARG
ARG
ARG
125
125
125
N
1
3.27
0.50
120.30
123.57
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
125
125
125
N
1
A
A
C
O
GLY
GLY
71
71
0.126
0.016
1.232
1.358
N
1
A
A
C
N
GLY
SER
71
72
0.173
0.023
1.336
1.509
Y
1
A
A
O
O
HOH
HOH
253
283
1.92
1_555
3_554
1
A
A
O
NH1
LYS
ARG
13
128
2.09
1_555
8_555
1
A
A
CA
NH2
GLY
ARG
16
128
2.10
1_555
8_555
1
A
A
NH2
O
ARG
HOH
45
245
2.14
1_555
7_556
1
A
GLN
57
38.46
61.22
1
A
PRO
70
-52.96
-93.97
0.229
1.75
12579
1
1.75
103
1147
43
0
1001
0.021
refinement
PROLSQ
LYSOZYME (E.C.3.2.1.17) COMPLEXED WITH THE INHIBITOR TRI-N-ACETYLCHITOTRIOSE
REFINEMENT OF AN ENZYME COMPLEX WITH INHIBITOR BOUND AT PARTIAL OCCUPANCY. HEN EGG-WHITE LYSOZYME AND TRI-N-ACETYLCHITOTRIOSE AT 1.75 ANGSTROMS RESOLUTION
1
N
N
2
N
N
3
N
N
A
ARG
5
A
ARG
5
HELX_P
A
HIS
15
A
HIS
15
1
A
11
A
LEU
25
A
LEU
25
HELX_P
A
GLU
35
A
GLU
35
1
B
11
A
CYS
80
A
CYS
80
HELX_P
A
LEU
84
A
LEU
84
5
C
5
A
THR
89
A
THR
89
HELX_P
A
ILE
98
A
ILE
98
1
D
10
A
VAL
109
A
VAL
109
HELX_P
A
ASN
113
A
ASN
113
1
E
5
disulf
2.086
A
CYS
6
A
SG
CYS
6
1_555
A
CYS
127
A
SG
CYS
127
1_555
disulf
2.081
A
CYS
30
A
SG
CYS
30
1_555
A
CYS
115
A
SG
CYS
115
1_555
disulf
2.114
A
CYS
64
A
SG
CYS
64
1_555
A
CYS
80
A
SG
CYS
80
1_555
disulf
2.090
A
CYS
76
A
SG
CYS
76
1_555
A
CYS
94
A
SG
CYS
94
1_555
covale
1.476
both
B
NAG
1
B
O4
NAG
1_555
B
NAG
2
B
C1
NAG
1_555
covale
1.454
both
B
NAG
2
B
O4
NAG
1_555
B
NAG
3
B
C1
NAG
1_555
HYDROLASE(O-GLYCOSYL)
HYDROLASE(O-GLYCOSYL)
LYC_CHICK
UNP
1
1
P00698
MRSLLILVLCFLPLAALGKVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRW
WCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
19
147
1HEW
1
129
P00698
A
1
1
129
2
3
anti-parallel
anti-parallel
anti-parallel
A
LYS
1
A
LYS
1
A
PHE
3
A
PHE
3
A
PHE
38
A
PHE
38
A
THR
40
A
THR
40
A
ALA
42
A
ALA
42
A
ASN
46
A
ASN
46
A
SER
50
A
SER
50
A
GLY
54
A
GLY
54
A
GLN
57
A
GLN
57
A
SER
60
A
SER
60
96
P 43 21 2