0.018976
0.010956
0.000000
0.000000
0.021911
0.000000
0.000000
0.000000
0.004817
0.00000
0.00000
0.00000
Bond, C.S.
Kvaratskhelia, M.
Richard, D.
White, M.F.
Hunter, W.N.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
52.699
52.699
207.607
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
98
5509
10.1073/PNAS.091613398
11331763
Structure of Hjc, a Holliday Junction Resolvase, from Sulfolobus Solfataricus
2001
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
CCD
2000-09-15
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
0.97626
1.0
BM14
ESRF
0.97626
SYNCHROTRON
ESRF BEAMLINE BM14
16039.791
HOLLIDAY JUNCTION RESOLVING ENZYME HJC
1
man
polymer
18.015
water
79
nat
water
no
no
MNAKKRKGSAVERNIVSRLRDKGFAVVRAPASGSKRKDPIPDIIALKNGVIILIEMKSRKDIEGKIYVRREQAEGIIEFA
RKSGGSLFLGVKKPGVLKFIPFEKLRRTETGNYVADSEIEGLDLEDLVRLVEAKISRTLDNFL
MNAKKRKGSAVERNIVSRLRDKGFAVVRAPASGSKRKDPIPDIIALKNGVIILIEMKSRKDIEGKIYVRREQAEGIIEFA
RKSGGSLFLGVKKPGVLKFIPFEKLRRTETGNYVADSEIEGLDLEDLVRLVEAKISRTLDNFL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
2287
SULFOLOBUS SOLFATARICUS
562
ESCHERICHIA COLI
PET
1
2.6
53
4.50
0.1M SODIUM ACETATE PH 4.5, 20% GLYCEROL, 20% PEG 4K, 0.16M AMMONIUM SULFATE
repository
Initial release
Version format compliance
Version format compliance
1
0
2001-04-06
1
1
2011-05-08
1
2
2011-07-13
PDBE
Y
PDBE
2000-12-18
REL
HOH
water
HOH
2001
2
HOH
HOH
2001
A
HOH
2002
2
HOH
HOH
2002
A
HOH
2003
2
HOH
HOH
2003
A
HOH
2004
2
HOH
HOH
2004
A
HOH
2005
2
HOH
HOH
2005
A
HOH
2006
2
HOH
HOH
2006
A
HOH
2007
2
HOH
HOH
2007
A
HOH
2008
2
HOH
HOH
2008
A
HOH
2009
2
HOH
HOH
2009
A
HOH
2010
2
HOH
HOH
2010
A
HOH
2011
2
HOH
HOH
2011
A
HOH
2012
2
HOH
HOH
2012
A
HOH
2013
2
HOH
HOH
2013
A
HOH
2014
2
HOH
HOH
2014
A
HOH
2015
2
HOH
HOH
2015
A
HOH
2016
2
HOH
HOH
2016
A
HOH
2017
2
HOH
HOH
2017
A
HOH
2018
2
HOH
HOH
2018
A
HOH
2019
2
HOH
HOH
2019
A
HOH
2020
2
HOH
HOH
2020
A
HOH
2021
2
HOH
HOH
2021
A
HOH
2022
2
HOH
HOH
2022
A
HOH
2023
2
HOH
HOH
2023
A
HOH
2024
2
HOH
HOH
2024
A
HOH
2025
2
HOH
HOH
2025
A
HOH
2026
2
HOH
HOH
2026
A
HOH
2027
2
HOH
HOH
2027
A
HOH
2028
2
HOH
HOH
2028
A
HOH
2029
2
HOH
HOH
2029
A
HOH
2030
2
HOH
HOH
2030
A
HOH
2031
2
HOH
HOH
2031
A
HOH
2032
2
HOH
HOH
2032
A
HOH
2033
2
HOH
HOH
2033
A
HOH
2034
2
HOH
HOH
2034
A
HOH
2035
2
HOH
HOH
2035
A
HOH
2036
2
HOH
HOH
2036
A
HOH
2037
2
HOH
HOH
2037
A
HOH
2038
2
HOH
HOH
2038
A
HOH
2039
2
HOH
HOH
2039
A
HOH
2040
2
HOH
HOH
2040
A
HOH
2041
2
HOH
HOH
2041
A
HOH
2042
2
HOH
HOH
2042
A
HOH
2043
2
HOH
HOH
2043
A
HOH
2044
2
HOH
HOH
2044
A
HOH
2045
2
HOH
HOH
2045
A
HOH
2046
2
HOH
HOH
2046
A
HOH
2047
2
HOH
HOH
2047
A
HOH
2048
2
HOH
HOH
2048
A
HOH
2049
2
HOH
HOH
2049
A
HOH
2050
2
HOH
HOH
2050
A
HOH
2051
2
HOH
HOH
2051
A
HOH
2052
2
HOH
HOH
2052
A
HOH
2053
2
HOH
HOH
2053
A
HOH
2054
2
HOH
HOH
2054
A
HOH
2055
2
HOH
HOH
2055
A
HOH
2056
2
HOH
HOH
2056
A
HOH
2057
2
HOH
HOH
2057
A
HOH
2058
2
HOH
HOH
2058
A
HOH
2059
2
HOH
HOH
2059
A
HOH
2060
2
HOH
HOH
2060
A
HOH
2061
2
HOH
HOH
2061
A
HOH
2062
2
HOH
HOH
2062
A
HOH
2063
2
HOH
HOH
2063
A
HOH
2064
2
HOH
HOH
2064
A
HOH
2065
2
HOH
HOH
2065
A
HOH
2066
2
HOH
HOH
2066
A
HOH
2067
2
HOH
HOH
2067
A
HOH
2068
2
HOH
HOH
2068
A
HOH
2069
2
HOH
HOH
2069
A
HOH
2070
2
HOH
HOH
2070
A
HOH
2071
2
HOH
HOH
2071
A
HOH
2072
2
HOH
HOH
2072
A
HOH
2073
2
HOH
HOH
2073
A
HOH
2074
2
HOH
HOH
2074
A
HOH
2075
2
HOH
HOH
2075
A
HOH
2076
2
HOH
HOH
2076
A
HOH
2077
2
HOH
HOH
2077
A
HOH
2078
2
HOH
HOH
2078
A
HOH
2079
2
HOH
HOH
2079
A
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
n
7
7
A
n
8
8
A
SER
9
n
9
SER
9
A
ALA
10
n
10
ALA
10
A
VAL
11
n
11
VAL
11
A
GLU
12
n
12
GLU
12
A
ARG
13
n
13
ARG
13
A
ASN
14
n
14
ASN
14
A
ILE
15
n
15
ILE
15
A
VAL
16
n
16
VAL
16
A
SER
17
n
17
SER
17
A
ARG
18
n
18
ARG
18
A
LEU
19
n
19
LEU
19
A
ARG
20
n
20
ARG
20
A
ASP
21
n
21
ASP
21
A
LYS
22
n
22
LYS
22
A
GLY
23
n
23
GLY
23
A
PHE
24
n
24
PHE
24
A
ALA
25
n
25
ALA
25
A
VAL
26
n
26
VAL
26
A
VAL
27
n
27
VAL
27
A
ARG
28
n
28
ARG
28
A
ALA
29
n
29
ALA
29
A
PRO
30
n
30
PRO
30
A
ALA
31
n
31
ALA
31
A
n
32
32
A
n
33
33
A
n
34
34
A
n
35
35
A
n
36
36
A
n
37
37
A
n
38
38
A
PRO
39
n
39
PRO
39
A
ILE
40
n
40
ILE
40
A
PRO
41
n
41
PRO
41
A
ASP
42
n
42
ASP
42
A
ILE
43
n
43
ILE
43
A
ILE
44
n
44
ILE
44
A
ALA
45
n
45
ALA
45
A
LEU
46
n
46
LEU
46
A
LYS
47
n
47
LYS
47
A
ASN
48
n
48
ASN
48
A
GLY
49
n
49
GLY
49
A
VAL
50
n
50
VAL
50
A
ILE
51
n
51
ILE
51
A
ILE
52
n
52
ILE
52
A
LEU
53
n
53
LEU
53
A
ILE
54
n
54
ILE
54
A
GLU
55
n
55
GLU
55
A
MET
56
n
56
MET
56
A
LYS
57
n
57
LYS
57
A
SER
58
n
58
SER
58
A
ARG
59
n
59
ARG
59
A
LYS
60
n
60
LYS
60
A
ASP
61
n
61
ASP
61
A
ILE
62
n
62
ILE
62
A
GLU
63
n
63
GLU
63
A
GLY
64
n
64
GLY
64
A
LYS
65
n
65
LYS
65
A
ILE
66
n
66
ILE
66
A
TYR
67
n
67
TYR
67
A
VAL
68
n
68
VAL
68
A
ARG
69
n
69
ARG
69
A
ARG
70
n
70
ARG
70
A
GLU
71
n
71
GLU
71
A
GLN
72
n
72
GLN
72
A
ALA
73
n
73
ALA
73
A
GLU
74
n
74
GLU
74
A
GLY
75
n
75
GLY
75
A
ILE
76
n
76
ILE
76
A
ILE
77
n
77
ILE
77
A
GLU
78
n
78
GLU
78
A
PHE
79
n
79
PHE
79
A
ALA
80
n
80
ALA
80
A
ARG
81
n
81
ARG
81
A
LYS
82
n
82
LYS
82
A
SER
83
n
83
SER
83
A
GLY
84
n
84
GLY
84
A
GLY
85
n
85
GLY
85
A
SER
86
n
86
SER
86
A
LEU
87
n
87
LEU
87
A
PHE
88
n
88
PHE
88
A
LEU
89
n
89
LEU
89
A
GLY
90
n
90
GLY
90
A
VAL
91
n
91
VAL
91
A
LYS
92
n
92
LYS
92
A
LYS
93
n
93
LYS
93
A
PRO
94
n
94
PRO
94
A
GLY
95
n
95
GLY
95
A
VAL
96
n
96
VAL
96
A
LEU
97
n
97
LEU
97
A
LYS
98
n
98
LYS
98
A
PHE
99
n
99
PHE
99
A
ILE
100
n
100
ILE
100
A
PRO
101
n
101
PRO
101
A
PHE
102
n
102
PHE
102
A
GLU
103
n
103
GLU
103
A
LYS
104
n
104
LYS
104
A
LEU
105
n
105
LEU
105
A
ARG
106
n
106
ARG
106
A
ARG
107
n
107
ARG
107
A
THR
108
n
108
THR
108
A
GLU
109
n
109
GLU
109
A
THR
110
n
110
THR
110
A
GLY
111
n
111
GLY
111
A
ASN
112
n
112
ASN
112
A
TYR
113
n
113
TYR
113
A
VAL
114
n
114
VAL
114
A
ALA
115
n
115
ALA
115
A
ASP
116
n
116
ASP
116
A
SER
117
n
117
SER
117
A
GLU
118
n
118
GLU
118
A
ILE
119
n
119
ILE
119
A
GLU
120
n
120
GLU
120
A
GLY
121
n
121
GLY
121
A
LEU
122
n
122
LEU
122
A
ASP
123
n
123
ASP
123
A
LEU
124
n
124
LEU
124
A
GLU
125
n
125
GLU
125
A
ASP
126
n
126
ASP
126
A
LEU
127
n
127
LEU
127
A
VAL
128
n
128
VAL
128
A
ARG
129
n
129
ARG
129
A
LEU
130
n
130
LEU
130
A
VAL
131
n
131
VAL
131
A
GLU
132
n
132
GLU
132
A
ALA
133
n
133
ALA
133
A
LYS
134
n
134
LYS
134
A
ILE
135
n
135
ILE
135
A
SER
136
n
136
SER
136
A
ARG
137
n
137
ARG
137
A
THR
138
n
138
THR
138
A
LEU
139
n
139
LEU
139
A
ASP
140
n
140
ASP
140
A
n
141
141
A
n
142
142
A
n
143
143
A
author_and_software_defined_assembly
PQS
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
8_555
x-y,-y,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
27
A
N
VAL
27
A
O
ILE
44
A
O
ILE
44
A
N
LYS
47
A
N
LYS
47
A
O
VAL
50
A
O
VAL
50
A
N
LEU
53
A
N
LEU
53
A
O
SER
86
A
O
SER
86
A
N
VAL
91
A
N
VAL
91
A
O
LYS
98
A
O
LYS
98
A
N
ARG
59
A
N
ARG
59
A
O
TYR
67
A
O
TYR
67
A
N
VAL
68
A
N
VAL
68
A
O
TYR
113
A
O
TYR
113
A
N
VAL
114
A
N
VAL
114
A
O
ARG
106
A
O
ARG
106
1
A
HOH
2032
B
HOH
1
A
CG
GLU
118
A
CG
GLU
118
0
Y
1
A
CD
GLU
118
A
CD
GLU
118
0
Y
1
A
OE1
GLU
118
A
OE1
GLU
118
0
Y
1
A
OE2
GLU
118
A
OE2
GLU
118
0
Y
1
A
MET
1
A
MET
1
1
Y
1
A
ASN
2
A
ASN
2
1
Y
1
A
ALA
3
A
ALA
3
1
Y
1
A
LYS
4
A
LYS
4
1
Y
1
A
LYS
5
A
LYS
5
1
Y
1
A
ARG
6
A
ARG
6
1
Y
1
A
LYS
7
A
LYS
7
1
Y
1
A
GLY
8
A
GLY
8
1
Y
1
A
SER
32
A
SER
32
1
Y
1
A
GLY
33
A
GLY
33
1
Y
1
A
SER
34
A
SER
34
1
Y
1
A
LYS
35
A
LYS
35
1
Y
1
A
ARG
36
A
ARG
36
1
Y
1
A
LYS
37
A
LYS
37
1
Y
1
A
ASP
38
A
ASP
38
1
Y
1
A
ASN
141
A
ASN
141
1
Y
1
A
PHE
142
A
PHE
142
1
Y
1
A
LEU
143
A
LEU
143
1
Y
1
A
ARG
59
-11.07
1
7.74
1.20
103.30
111.04
A
A
A
N
CA
CB
PRO
PRO
PRO
39
39
39
N
1
19.09
2.50
121.70
140.79
A
A
A
C
N
CA
MET
LYS
LYS
56
57
57
Y
1
8.53
1.40
123.60
132.13
A
A
A
CD
NE
CZ
ARG
ARG
ARG
70
70
70
N
1
14.00
2.20
113.40
127.40
A
A
A
CA
CB
CG
GLU
GLU
GLU
71
71
71
N
1
20.07
1.40
123.60
143.67
A
A
A
CD
NE
CZ
ARG
ARG
ARG
81
81
81
B
B
B
N
1
5.30
0.50
120.30
125.60
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
81
81
81
B
B
B
N
1
-22.78
2.70
114.20
91.42
A
A
A
CB
CG
CD
GLU
GLU
GLU
118
118
118
N
1
A
LYS
57
18.14
58.77
1
A
SER
58
-39.08
-86.55
1
A
PRO
94
-63.56
76.26
1
A
ILE
119
-17.98
-89.59
35
0.281
0.220
2.15
20.0
484
10061
5.0
99.2
RANDOM
1
THROUGHOUT
0.0
MAD
0.22
0.21
2.15
20.0
79
1062
0
0
983
0.014
0.020
0.036
0.040
0.057
0.050
2.284
3.000
4.043
5.000
1.962
6.000
3.376
8.000
0.0519
0.0226
24
2.150
20.000
1HH1
10061
0.04100
1
36.0000
4.000
99.2
2.15
2.20
7.500
0.10500
1
97.0
refinement
REFMAC
data reduction
DENZO
data scaling
SCALA
phasing
SOLVE/RESOLVE
HOLLIDAY JUNCTION RESOLVING ENZYME HJC
THE STRUCTURE OF HJC, A HOLLIDAY JUNCTION RESOLVING ENZYME FROM SULFOLOBUS SOLFATARICUS
1
N
N
2
N
N
A
SER
9
A
SER
9
HELX_P
A
LYS
22
A
LYS
22
1
1
14
A
ARG
69
A
ARG
69
HELX_P
A
GLY
84
A
GLY
84
1
2
16
A
GLU
103
A
GLU
103
HELX_P
A
LEU
105
A
LEU
105
5
3
3
A
ASP
123
A
ASP
123
HELX_P
A
ASP
140
A
ASP
140
1
4
18
HOLLIDAY JUNCTION RESOLVASE
HOLLIDAY JUNCTION RESOLVASE, HOMOLOGOUS RECOMBINATION, NUCLEASE DOMAIN, ARCHAEA
Q9UWX8
UNP
1
Q9UWX8
1
143
1HH1
1
143
Q9UWX8
A
1
1
143
5
4
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ALA
25
A
ALA
25
A
ARG
28
A
ARG
28
A
ILE
43
A
ILE
43
A
LYS
47
A
LYS
47
A
VAL
50
A
VAL
50
A
MET
56
A
MET
56
A
SER
86
A
SER
86
A
LYS
92
A
LYS
92
A
LEU
97
A
LEU
97
A
PRO
101
A
PRO
101
A
ARG
59
A
ARG
59
A
LYS
60
A
LYS
60
A
ILE
66
A
ILE
66
A
VAL
68
A
VAL
68
A
TYR
113
A
TYR
113
A
VAL
114
A
VAL
114
A
ARG
106
A
ARG
106
A
ARG
107
A
ARG
107
178
P 61 2 2