1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Shao, W. Fernandez, E. Navenot, J.M. Wilken, J. Thompson, D.A. Pepiper, S. Schweitzer, B.I. Lolis, E. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N O N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N N N 58 R C N 59 N C N 60 N O N 61 N C N 62 N S N 63 N O N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N N N 72 S C N 73 N C N 74 N O N 75 N C N 76 N C N 77 N C N 78 N O N 79 N N N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N N N 92 N C N 93 N C N 94 N O N 95 N O N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N N N 102 S C N 103 N C N 104 N O N 105 N C Y 106 N C Y 107 N N Y 108 N C Y 109 N C Y 110 N N N 111 N O N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N N N 123 S C N 124 N C N 125 N O N 126 S C N 127 N C N 128 N C N 129 N C N 130 N O N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N N N 145 S C N 146 N C N 147 N O N 148 N C N 149 N C N 150 N C N 151 N C N 152 N O N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N N N 167 S C N 168 N C N 169 N O N 170 N C N 171 N C N 172 N C N 173 N C N 174 N N N 175 N O N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N O N 196 N C N 197 N C N 198 N SE N 199 N C N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N N N 212 S C N 213 N C N 214 N O N 215 N C Y 216 N C Y 217 N C Y 218 N C Y 219 N C Y 220 N C Y 221 N C N 222 N O N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N N N 235 S C N 236 N C N 237 N O N 238 N C N 239 N C N 240 N C N 241 N O N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N O N 257 N O N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N N N 266 S C N 267 N C N 268 N O N 269 R C N 270 N O N 271 N C N 272 N O N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N N N 283 S C N 284 N C N 285 N O N 286 N C Y 287 N C Y 288 N C Y 289 N C Y 290 N N Y 291 N C Y 292 N C Y 293 N C Y 294 N C Y 295 N C N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N N N 310 S C N 311 N C N 312 N O N 313 N C Y 314 N C Y 315 N C Y 316 N C Y 317 N C Y 318 N C Y 319 N C N 320 N O N 321 N O N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N N N 334 S C N 335 N C N 336 N O N 337 N C N 338 N C N 339 N C N 340 N O N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N doub N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N doub N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N doub N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N doub N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N doub N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N doub Y 108 N doub N 109 N sing Y 110 N sing N 111 N sing Y 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N doub N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N doub N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N doub N 208 N sing N 209 N sing N 210 N sing N 211 N sing Y 212 N doub Y 213 N sing Y 214 N sing N 215 N sing Y 216 N doub N 217 N sing Y 218 N doub N 219 N sing Y 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N doub N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N doub N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N doub N 277 N sing N 278 N sing N 279 N sing N 280 N sing Y 281 N doub Y 282 N sing Y 283 N sing N 284 N sing Y 285 N doub Y 286 N sing Y 287 N sing N 288 N sing Y 289 N sing Y 290 N doub N 291 N sing Y 292 N doub N 293 N sing Y 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N doub N 305 N sing N 306 N sing N 307 N sing N 308 N sing Y 309 N doub Y 310 N sing Y 311 N sing N 312 N sing Y 313 N doub N 314 N sing Y 315 N doub N 316 N sing Y 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N doub N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing IX Eur.J.Biochem. EJBCAI 0262 0014-2956 268 2948 2959 10.1046/j.1432-1327.2001.02184.x 11358512 CCR2 and CCR5 receptor-binding properties of herpesvirus-8 vMIP-II based on sequence analysis and its solution structure 2001 NE FEBS Lett. FEBLAL 0165 0014-5793 441 77 82 Accessibility of selenomethionine proteins by total chemical synthesis: Structural studies of human herpesvirus-8 MIP-II 1998 10.2210/pdb1hhv/pdb pdb_00001hhv 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 8462.800 VIRUS CHEMOKINE VMIP-II 1 syn polymer ORF K4; vMIP-II; macrophage inflammatory protein 1-alpha homolog no yes GDTLGASWHRPDKCCLGYQKRPLPQVLLSSWYPTSQLCSKPGVIFLTKRGRQVCADKSKDWVKKL(MSE)QQLPVTAR GDTLGASWHRPDKCCLGYQKRPLPQVLLSSWYPTSQLCSKPGVIFLTKRGRQVCADKSKDWVKKLMQQLPVTAR A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n citation_author pdbx_struct_assembly pdbx_struct_oper_list chem_comp_atom chem_comp_bond database_2 struct_conn repository Initial release Version format compliance Version format compliance Database references Derived calculations Data collection Database references Derived calculations 1 0 2003-09-16 1 1 2008-04-26 1 2 2011-07-13 1 3 2018-01-24 1 4 2023-12-27 _citation_author.name _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag BNL Y RCSB 1998-12-06 REL SEQUENCE from Human herpesvirus 8 sample THE STRUCTURES WERE DETERMINED USING TWO- DIMENSIONAL HOMO- AND HETERO-NUCLEAR NMR SPECTROSCOPY. LEAST RESTRAINT VIOLATION AND LOWEST ENERGY 80 25 NOESY TOCSY HSQC DQF-COSY 50 mM 3.25 308 K TORSIONAL ANGLE MOLECULAR DYNAMICS 90% H2O/10% D2O BRUNGER refinement X-PLOR 3.851 BRUNGER structure calculation X-PLOR 3.851 600 Varian UNITYPLUS GLY 1 n 1 GLY 1 A ASP 2 n 2 ASP 2 A THR 3 n 3 THR 3 A LEU 4 n 4 LEU 4 A GLY 5 n 5 GLY 5 A ALA 6 n 6 ALA 6 A SER 7 n 7 SER 7 A TRP 8 n 8 TRP 8 A HIS 9 n 9 HIS 9 A ARG 10 n 10 ARG 10 A PRO 11 n 11 PRO 11 A ASP 12 n 12 ASP 12 A LYS 13 n 13 LYS 13 A CYS 14 n 14 CYS 14 A CYS 15 n 15 CYS 15 A LEU 16 n 16 LEU 16 A GLY 17 n 17 GLY 17 A TYR 18 n 18 TYR 18 A GLN 19 n 19 GLN 19 A LYS 20 n 20 LYS 20 A ARG 21 n 21 ARG 21 A PRO 22 n 22 PRO 22 A LEU 23 n 23 LEU 23 A PRO 24 n 24 PRO 24 A GLN 25 n 25 GLN 25 A VAL 26 n 26 VAL 26 A LEU 27 n 27 LEU 27 A LEU 28 n 28 LEU 28 A SER 29 n 29 SER 29 A SER 30 n 30 SER 30 A TRP 31 n 31 TRP 31 A TYR 32 n 32 TYR 32 A PRO 33 n 33 PRO 33 A THR 34 n 34 THR 34 A SER 35 n 35 SER 35 A GLN 36 n 36 GLN 36 A LEU 37 n 37 LEU 37 A CYS 38 n 38 CYS 38 A SER 39 n 39 SER 39 A LYS 40 n 40 LYS 40 A PRO 41 n 41 PRO 41 A GLY 42 n 42 GLY 42 A VAL 43 n 43 VAL 43 A ILE 44 n 44 ILE 44 A PHE 45 n 45 PHE 45 A LEU 46 n 46 LEU 46 A THR 47 n 47 THR 47 A LYS 48 n 48 LYS 48 A ARG 49 n 49 ARG 49 A GLY 50 n 50 GLY 50 A ARG 51 n 51 ARG 51 A GLN 52 n 52 GLN 52 A VAL 53 n 53 VAL 53 A CYS 54 n 54 CYS 54 A ALA 55 n 55 ALA 55 A ASP 56 n 56 ASP 56 A LYS 57 n 57 LYS 57 A SER 58 n 58 SER 58 A LYS 59 n 59 LYS 59 A ASP 60 n 60 ASP 60 A TRP 61 n 61 TRP 61 A VAL 62 n 62 VAL 62 A LYS 63 n 63 LYS 63 A LYS 64 n 64 LYS 64 A LEU 65 n 65 LEU 65 A MSE 66 n 66 MSE 66 A GLN 67 n 67 GLN 67 A GLN 68 n 68 GLN 68 A LEU 69 n 69 LEU 69 A PRO 70 n 70 PRO 70 A VAL 71 n 71 VAL 71 A THR 72 n 72 THR 72 A ALA 73 n 73 ALA 73 A ARG 74 n 74 ARG 74 A author_defined_assembly 1 monomeric A MSE 66 SELENOMETHIONINE A MSE 66 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 identity operation 0.0000000000 0.0000000000 0.0000000000 A O VAL 43 A O VAL 43 A N ALA 55 A N ALA 55 1 A O ARG 74 A O ARG 74 1 Y 2 A O ARG 74 A O ARG 74 1 Y 3 A O ARG 74 A O ARG 74 1 Y 4 A O ARG 74 A O ARG 74 1 Y 5 A O ARG 74 A O ARG 74 1 Y 6 A O ARG 74 A O ARG 74 1 Y 7 A O ARG 74 A O ARG 74 1 Y 8 A O ARG 74 A O ARG 74 1 Y 9 A O ARG 74 A O ARG 74 1 Y 10 A O ARG 74 A O ARG 74 1 Y 11 A O ARG 74 A O ARG 74 1 Y 12 A O ARG 74 A O ARG 74 1 Y 13 A O ARG 74 A O ARG 74 1 Y 14 A O ARG 74 A O ARG 74 1 Y 15 A O ARG 74 A O ARG 74 1 Y 16 A O ARG 74 A O ARG 74 1 Y 17 A O ARG 74 A O ARG 74 1 Y 18 A O ARG 74 A O ARG 74 1 Y 19 A O ARG 74 A O ARG 74 1 Y 20 A O ARG 74 A O ARG 74 1 Y 21 A O ARG 74 A O ARG 74 1 Y 22 A O ARG 74 A O ARG 74 1 Y 23 A O ARG 74 A O ARG 74 1 Y 24 A O ARG 74 A O ARG 74 1 Y 25 A O ARG 74 A O ARG 74 1 Y 1 A A H O GLN CYS 19 54 1.60 2 A A O HG1 ASP THR 2 3 1.48 2 A A H O GLN CYS 19 54 1.58 4 A A O H ASP LYS 56 59 1.57 5 A A H O GLN CYS 19 54 1.47 6 A A H O GLN CYS 19 54 1.55 7 A A H O GLN CYS 19 54 1.57 9 A A O HZ2 LEU LYS 28 48 1.59 10 A A O H TRP THR 31 72 1.56 10 A A H O GLN CYS 19 54 1.58 11 A A O H ASP LYS 56 59 1.55 12 A A HG O SER THR 29 47 1.59 13 A A OD1 H ASP SER 56 58 1.59 15 A A H O GLN CYS 19 54 1.53 16 A A O H TRP THR 31 72 1.46 16 A A H O GLN CYS 19 54 1.52 17 A A H O GLN CYS 19 54 1.52 18 A A H O GLN CYS 19 54 1.42 18 A A O H TRP ARG 8 10 1.55 19 A A HG O SER THR 29 47 1.51 19 A A H O GLN CYS 19 54 1.56 20 A A HH O TYR PRO 18 41 1.56 21 A A H O GLN CYS 19 54 1.56 23 A A H O GLN CYS 19 54 1.59 1 A ARG 21 0.317 SIDE CHAIN 1 A ARG 49 0.089 SIDE CHAIN 1 A ARG 51 0.251 SIDE CHAIN 1 A ARG 74 0.304 SIDE CHAIN 2 A ARG 10 0.316 SIDE CHAIN 2 A ARG 21 0.316 SIDE CHAIN 2 A ARG 49 0.200 SIDE CHAIN 2 A ARG 74 0.291 SIDE CHAIN 3 A ARG 10 0.230 SIDE CHAIN 3 A ARG 49 0.127 SIDE CHAIN 3 A ARG 51 0.175 SIDE CHAIN 3 A ARG 74 0.145 SIDE CHAIN 4 A ARG 10 0.310 SIDE CHAIN 4 A ARG 21 0.317 SIDE CHAIN 4 A ARG 49 0.303 SIDE CHAIN 4 A ARG 51 0.306 SIDE CHAIN 4 A ARG 74 0.315 SIDE CHAIN 5 A ARG 10 0.304 SIDE CHAIN 5 A ARG 21 0.164 SIDE CHAIN 5 A ARG 49 0.176 SIDE CHAIN 5 A ARG 51 0.275 SIDE CHAIN 5 A ARG 74 0.311 SIDE CHAIN 6 A ARG 10 0.293 SIDE CHAIN 6 A ARG 21 0.250 SIDE CHAIN 6 A ARG 49 0.259 SIDE CHAIN 6 A ARG 51 0.308 SIDE CHAIN 6 A ARG 74 0.294 SIDE CHAIN 7 A ARG 10 0.192 SIDE CHAIN 7 A ARG 21 0.146 SIDE CHAIN 7 A ARG 49 0.214 SIDE CHAIN 7 A ARG 51 0.224 SIDE CHAIN 7 A ARG 74 0.317 SIDE CHAIN 8 A ARG 10 0.317 SIDE CHAIN 8 A ARG 21 0.096 SIDE CHAIN 8 A ARG 49 0.285 SIDE CHAIN 8 A ARG 51 0.308 SIDE CHAIN 8 A ARG 74 0.317 SIDE CHAIN 9 A ARG 10 0.301 SIDE CHAIN 9 A ARG 21 0.317 SIDE CHAIN 9 A ARG 49 0.306 SIDE CHAIN 9 A ARG 51 0.132 SIDE CHAIN 9 A ARG 74 0.212 SIDE CHAIN 10 A ARG 10 0.136 SIDE CHAIN 10 A ARG 21 0.298 SIDE CHAIN 10 A ARG 49 0.192 SIDE CHAIN 10 A ARG 51 0.297 SIDE CHAIN 10 A ARG 74 0.192 SIDE CHAIN 11 A ARG 10 0.210 SIDE CHAIN 11 A ARG 21 0.107 SIDE CHAIN 11 A ARG 49 0.089 SIDE CHAIN 11 A ARG 51 0.316 SIDE CHAIN 12 A ARG 10 0.088 SIDE CHAIN 12 A ARG 21 0.116 SIDE CHAIN 12 A ARG 49 0.316 SIDE CHAIN 12 A ARG 51 0.317 SIDE CHAIN 12 A ARG 74 0.252 SIDE CHAIN 13 A ARG 10 0.096 SIDE CHAIN 13 A ARG 49 0.208 SIDE CHAIN 13 A ARG 51 0.230 SIDE CHAIN 13 A ARG 74 0.314 SIDE CHAIN 14 A ARG 10 0.278 SIDE CHAIN 14 A ARG 21 0.277 SIDE CHAIN 14 A ARG 49 0.187 SIDE CHAIN 14 A ARG 51 0.317 SIDE CHAIN 14 A ARG 74 0.282 SIDE CHAIN 15 A ARG 10 0.169 SIDE CHAIN 15 A ARG 21 0.313 SIDE CHAIN 15 A ARG 49 0.241 SIDE CHAIN 15 A ARG 51 0.314 SIDE CHAIN 15 A ARG 74 0.318 SIDE CHAIN 16 A ARG 10 0.238 SIDE CHAIN 16 A ARG 21 0.235 SIDE CHAIN 16 A ARG 49 0.203 SIDE CHAIN 16 A ARG 51 0.291 SIDE CHAIN 16 A ARG 74 0.208 SIDE CHAIN 17 A ARG 10 0.262 SIDE CHAIN 17 A ARG 21 0.318 SIDE CHAIN 17 A ARG 49 0.096 SIDE CHAIN 17 A ARG 51 0.170 SIDE CHAIN 17 A ARG 74 0.281 SIDE CHAIN 18 A ARG 10 0.318 SIDE CHAIN 18 A ARG 21 0.165 SIDE CHAIN 18 A ARG 49 0.102 SIDE CHAIN 18 A ARG 51 0.241 SIDE CHAIN 18 A ARG 74 0.312 SIDE CHAIN 19 A ARG 10 0.160 SIDE CHAIN 19 A ARG 21 0.201 SIDE CHAIN 19 A ARG 49 0.311 SIDE CHAIN 19 A ARG 51 0.250 SIDE CHAIN 19 A ARG 74 0.275 SIDE CHAIN 20 A ARG 10 0.305 SIDE CHAIN 20 A ARG 21 0.278 SIDE CHAIN 20 A ARG 51 0.199 SIDE CHAIN 20 A ARG 74 0.187 SIDE CHAIN 21 A ARG 10 0.239 SIDE CHAIN 21 A ARG 49 0.318 SIDE CHAIN 21 A ARG 51 0.316 SIDE CHAIN 21 A ARG 74 0.299 SIDE CHAIN 22 A ARG 21 0.305 SIDE CHAIN 22 A ARG 49 0.297 SIDE CHAIN 22 A ARG 51 0.317 SIDE CHAIN 22 A ARG 74 0.081 SIDE CHAIN 23 A ARG 10 0.303 SIDE CHAIN 23 A ARG 21 0.246 SIDE CHAIN 23 A ARG 49 0.185 SIDE CHAIN 23 A ARG 51 0.157 SIDE CHAIN 23 A ARG 74 0.314 SIDE CHAIN 24 A ARG 10 0.118 SIDE CHAIN 24 A ARG 21 0.297 SIDE CHAIN 24 A ARG 49 0.301 SIDE CHAIN 24 A ARG 51 0.288 SIDE CHAIN 24 A ARG 74 0.294 SIDE CHAIN 25 A ARG 10 0.315 SIDE CHAIN 25 A ARG 21 0.316 SIDE CHAIN 25 A ARG 49 0.314 SIDE CHAIN 25 A ARG 51 0.082 SIDE CHAIN 25 A ARG 74 0.141 SIDE CHAIN 1 A ASP 2 -158.87 -50.72 1 A THR 3 48.57 -147.67 1 A LEU 4 -98.59 -86.88 1 A ALA 6 -58.03 109.79 1 A SER 7 -144.64 -33.83 1 A TRP 8 -77.10 -169.77 1 A ARG 10 56.68 82.20 1 A PRO 11 -74.42 -159.56 1 A ASP 12 -163.75 -98.10 1 A CYS 14 -158.31 -33.60 1 A CYS 15 -171.57 -176.79 1 A TYR 18 178.64 126.65 1 A SER 29 -96.10 -73.95 1 A TYR 32 -170.35 134.64 1 A LYS 40 -169.12 96.20 1 A THR 47 -61.52 -156.72 1 A ARG 49 -122.36 -82.17 1 A VAL 71 -69.71 80.89 1 A THR 72 -38.10 160.90 1 A ALA 73 176.30 174.47 2 A ASP 2 -57.18 -79.32 2 A THR 3 51.06 175.32 2 A SER 7 -69.39 -86.21 2 A CYS 14 -160.84 -159.50 2 A CYS 15 -44.55 177.17 2 A LEU 16 -76.95 21.84 2 A SER 29 -96.07 -69.31 2 A SER 35 -86.04 -139.17 2 A GLN 36 -143.52 23.63 2 A CYS 38 -57.70 -166.89 2 A THR 47 -63.77 -150.57 2 A ARG 49 -124.52 -77.82 2 A VAL 71 -59.96 79.39 2 A THR 72 -38.57 135.73 3 A ASP 2 54.89 72.11 3 A THR 3 -165.46 103.13 3 A LEU 4 -177.37 -30.79 3 A ALA 6 51.83 99.36 3 A SER 7 -95.54 31.35 3 A LYS 13 -57.98 -154.30 3 A CYS 14 -84.06 -76.19 3 A TYR 18 178.85 126.90 3 A SER 29 -96.83 -73.47 3 A LYS 40 -177.37 89.88 3 A PRO 41 -70.83 -167.80 3 A THR 47 -60.01 -155.21 3 A ARG 49 -121.34 -76.61 3 A VAL 71 -60.80 76.79 3 A THR 72 -40.93 164.54 4 A ASP 2 -126.28 -128.84 4 A THR 3 60.18 128.24 4 A ALA 6 61.57 -172.02 4 A SER 7 -98.57 38.46 4 A HIS 9 -47.32 109.54 4 A ARG 10 57.27 153.83 4 A ASP 12 -108.48 65.88 4 A LYS 13 -57.88 -153.92 4 A CYS 15 -173.73 -178.00 4 A TYR 18 178.89 126.54 4 A THR 34 -109.35 -159.96 4 A SER 35 -103.73 -143.01 4 A GLN 36 -146.14 40.83 4 A THR 47 -60.20 -155.23 4 A ARG 49 -125.04 -81.37 4 A VAL 71 -64.22 82.87 4 A THR 72 -41.21 164.32 5 A ASP 2 -100.47 -97.06 5 A THR 3 63.85 -69.82 5 A ALA 6 175.02 128.60 5 A SER 7 -148.64 -89.70 5 A ARG 10 46.94 92.42 5 A CYS 14 -57.03 -73.16 5 A CYS 15 -128.67 -163.34 5 A LEU 16 -77.59 22.55 5 A TYR 18 178.84 125.18 5 A SER 29 -96.77 -71.55 5 A SER 30 -140.74 -159.78 5 A GLN 36 -98.21 30.99 5 A THR 47 -58.37 -150.47 5 A ARG 49 -113.78 -78.19 5 A VAL 71 -64.76 79.05 5 A THR 72 -33.82 153.43 5 A ALA 73 -118.38 73.52 6 A THR 3 -168.92 81.07 6 A ALA 6 50.79 -158.47 6 A TRP 8 -62.41 -165.20 6 A PRO 11 -73.22 -169.88 6 A ASP 12 -144.28 30.48 6 A CYS 14 -161.52 -29.68 6 A TYR 18 178.75 126.67 6 A SER 29 -95.89 -67.33 6 A SER 30 -142.33 -159.50 6 A THR 34 -109.27 -166.95 6 A LYS 40 -171.55 142.11 6 A THR 47 -60.39 -153.70 6 A ARG 49 -122.97 -77.58 6 A VAL 71 -61.49 76.88 6 A THR 72 -38.19 158.29 7 A HIS 9 -158.94 82.76 7 A ARG 10 59.21 139.95 7 A PRO 11 -72.98 -162.52 7 A ASP 12 -153.31 77.39 7 A GLN 19 -39.78 126.83 7 A SER 29 -95.37 -68.05 7 A CYS 38 -69.54 -161.64 7 A PRO 41 -73.23 -169.46 7 A THR 47 -62.72 -149.39 7 A ARG 49 -115.83 -79.48 7 A VAL 71 -57.93 82.94 7 A THR 72 -48.05 -176.99 7 A ALA 73 72.83 70.29 8 A LEU 4 -90.64 -66.60 8 A ASP 12 -144.22 38.01 8 A TYR 18 178.82 126.72 8 A SER 29 -90.07 -67.44 8 A SER 30 -144.71 -159.48 8 A THR 34 -109.58 -166.32 8 A CYS 38 -76.55 -160.37 8 A THR 47 -62.94 -156.82 8 A VAL 71 -60.14 83.71 8 A THR 72 -36.41 151.57 9 A ASP 2 -68.18 63.21 9 A SER 7 -85.09 -140.91 9 A TRP 8 -152.49 78.70 9 A TYR 18 178.73 126.39 9 A SER 29 -96.85 -71.42 9 A THR 47 -60.75 -152.33 9 A ARG 49 -120.14 -81.05 9 A LYS 57 -47.89 -18.11 9 A VAL 71 -58.33 86.37 9 A THR 72 -32.90 151.06 10 A THR 3 63.02 158.01 10 A ASP 12 -158.37 -89.88 10 A CYS 14 -161.18 -33.41 10 A TYR 18 178.83 126.75 10 A SER 29 -95.90 -72.61 10 A SER 30 -138.02 -159.66 10 A SER 35 -98.67 -148.08 10 A SER 39 -97.54 -65.68 10 A THR 47 -58.95 -150.76 10 A ARG 49 -112.81 -79.19 10 A VAL 71 -47.17 103.13 10 A THR 72 -52.15 -164.53 10 A ALA 73 71.80 124.92 11 A THR 3 -164.79 -44.04 11 A ALA 6 -91.42 -87.73 11 A SER 7 -153.80 55.35 11 A TRP 8 -51.69 107.78 11 A ASP 12 -109.99 -63.01 11 A LYS 13 -61.49 76.32 11 A CYS 14 -160.40 -164.14 11 A CYS 15 -65.33 -170.11 11 A VAL 26 -66.65 1.05 11 A SER 29 -97.67 -72.94 11 A SER 35 -99.11 -159.48 11 A CYS 38 -73.64 -168.83 11 A THR 47 -57.46 -151.92 11 A ARG 49 -121.09 -82.14 11 A LYS 57 -39.22 -27.53 11 A VAL 71 -55.27 83.88 11 A THR 72 -31.74 148.96 11 A ALA 73 59.38 142.79 12 A ASP 2 -142.97 45.31 12 A ALA 6 51.40 84.71 12 A TRP 8 -126.25 -164.27 12 A HIS 9 -178.06 137.98 12 A LYS 13 -43.81 150.27 12 A LEU 16 -78.78 22.38 12 A SER 29 -94.36 -70.23 12 A SER 30 -141.75 -159.93 12 A THR 34 -109.51 -168.59 12 A THR 47 -63.80 -151.87 12 A ARG 49 -130.82 -82.56 12 A VAL 71 -63.84 82.28 12 A THR 72 -35.51 158.20 13 A ALA 6 -53.89 100.66 13 A PRO 11 -73.48 -159.80 13 A LYS 13 -48.89 -179.04 13 A TYR 18 178.81 126.93 13 A SER 29 -94.29 -68.87 13 A SER 30 -141.67 -159.75 13 A SER 35 -121.07 -167.43 13 A THR 47 -60.73 -152.48 13 A ARG 49 -127.83 -83.82 13 A VAL 71 -56.35 91.91 13 A THR 72 -43.37 170.56 14 A ASP 2 -160.14 -87.19 14 A THR 3 -147.37 -57.61 14 A LEU 4 63.79 -69.14 14 A HIS 9 -115.68 77.01 14 A PRO 11 -72.38 -156.97 14 A ASP 12 -103.72 65.66 14 A LYS 13 -35.01 102.11 14 A TYR 18 178.74 126.99 14 A SER 29 -96.82 -71.09 14 A SER 30 -139.88 -159.67 14 A SER 35 -114.78 -169.94 14 A LYS 40 -177.91 85.69 14 A THR 47 -58.77 -152.19 14 A ARG 49 -124.14 -83.33 14 A VAL 71 -60.30 77.64 14 A THR 72 -45.49 172.65 15 A TRP 8 -54.11 109.35 15 A ARG 10 52.00 101.83 15 A CYS 14 -133.04 -83.81 15 A TYR 18 178.71 126.30 15 A SER 29 -96.12 -62.30 15 A SER 30 -146.75 -159.80 15 A SER 35 -94.15 -140.57 15 A GLN 36 -150.27 34.80 15 A CYS 38 -68.34 -159.52 15 A LYS 40 -173.72 90.53 15 A THR 47 -70.93 -149.50 15 A ARG 49 -124.32 -80.54 15 A VAL 71 -62.79 73.49 15 A THR 72 -40.91 159.78 15 A ALA 73 -151.57 39.97 16 A ASP 2 56.91 155.94 16 A THR 3 -164.86 -34.68 16 A ALA 6 52.04 179.99 16 A SER 7 -64.33 78.52 16 A HIS 9 -170.35 -179.18 16 A CYS 14 -100.13 -95.14 16 A LEU 16 -76.93 22.59 16 A TYR 18 178.79 125.38 16 A SER 29 -95.14 -68.35 16 A SER 30 -140.56 -159.65 16 A TYR 32 -170.14 135.04 16 A THR 34 -109.82 -160.20 16 A SER 35 -90.00 -145.40 16 A GLN 36 -143.98 43.64 16 A LEU 37 -131.88 -34.52 16 A CYS 38 -49.22 166.96 16 A LYS 40 -164.21 82.06 16 A THR 47 -61.55 -151.35 16 A ARG 49 -128.54 -85.97 16 A VAL 71 -44.33 107.21 16 A THR 72 -51.35 -159.00 16 A ALA 73 -171.51 47.93 17 A THR 3 54.41 107.02 17 A LEU 4 56.41 100.39 17 A SER 7 -132.72 -30.97 17 A TRP 8 -173.79 65.28 17 A HIS 9 -169.68 103.31 17 A CYS 14 -156.53 -28.23 17 A CYS 15 -171.93 -176.68 17 A TYR 18 178.79 127.83 17 A SER 29 -93.19 -70.15 17 A SER 30 -140.21 -159.89 17 A THR 34 -109.33 -162.33 17 A PRO 41 -71.52 -168.24 17 A THR 47 -57.96 -153.11 17 A ARG 49 -129.37 -80.42 17 A VAL 71 -64.39 71.22 17 A THR 72 -46.38 173.83 18 A THR 3 -101.81 74.91 18 A LEU 4 -165.63 49.66 18 A HIS 9 -67.71 56.06 18 A ARG 10 37.22 60.52 18 A ASP 12 180.00 96.04 18 A LYS 13 -58.16 -154.20 18 A CYS 14 -85.58 -112.85 18 A CYS 15 -178.37 -158.26 18 A LEU 16 -78.12 21.29 18 A TYR 18 178.91 125.35 18 A SER 29 -97.87 -73.04 18 A SER 30 -139.28 -159.61 18 A SER 35 -85.43 -148.25 18 A THR 47 -58.17 -152.55 18 A ARG 49 -127.49 -77.37 18 A VAL 71 -60.34 83.72 18 A THR 72 -36.78 157.17 18 A ALA 73 43.93 -159.97 19 A ASP 2 55.13 75.34 19 A THR 3 -164.51 39.34 19 A LEU 4 27.61 -129.51 19 A ALA 6 -146.66 10.74 19 A SER 7 179.88 139.23 19 A HIS 9 -165.17 109.45 19 A ARG 10 59.34 136.36 19 A PRO 11 -72.57 -167.50 19 A CYS 14 -144.83 -42.82 19 A CYS 15 179.85 -175.52 19 A SER 29 -94.53 -70.15 19 A THR 47 -58.93 -151.21 19 A ARG 49 -123.30 -79.09 19 A VAL 71 -63.33 74.66 19 A THR 72 -43.09 166.80 19 A ALA 73 168.47 -163.05 20 A ASP 2 -134.07 -38.37 20 A ALA 6 63.12 132.81 20 A SER 7 -54.82 173.04 20 A HIS 9 -98.07 44.43 20 A CYS 14 -142.70 -72.14 20 A LEU 16 -79.36 21.97 20 A SER 29 -97.69 -71.69 20 A SER 30 -140.52 -159.82 20 A THR 34 -109.46 -161.01 20 A THR 47 -58.29 -154.65 20 A ARG 49 -110.11 -73.93 20 A LYS 57 -39.28 -29.06 20 A VAL 71 -59.77 74.57 20 A THR 72 -38.47 158.32 21 A ASP 2 56.52 -84.73 21 A THR 3 36.78 51.34 21 A SER 7 -147.23 -54.58 21 A ARG 10 49.48 87.68 21 A ASP 12 -84.66 42.97 21 A CYS 14 -155.16 -80.10 21 A CYS 15 -173.47 -176.22 21 A TYR 18 178.69 126.60 21 A SER 29 -98.41 -72.80 21 A SER 30 -139.27 -159.82 21 A CYS 38 -76.76 -158.26 21 A LYS 40 -168.03 92.21 21 A THR 47 -59.54 -153.00 21 A ARG 49 -109.32 -75.98 21 A VAL 71 -61.97 83.69 21 A THR 72 -34.26 151.22 21 A ALA 73 63.00 -163.85 22 A ALA 6 54.50 102.13 22 A HIS 9 -179.05 83.64 22 A CYS 15 -179.94 -174.48 22 A SER 29 -96.68 -73.22 22 A THR 34 -109.52 -168.14 22 A SER 35 -76.28 -152.57 22 A GLN 36 -145.16 46.69 22 A LEU 37 -132.79 -30.05 22 A CYS 38 -54.98 171.99 22 A LYS 40 -162.94 84.17 22 A THR 47 -59.98 -153.99 22 A ARG 49 -125.59 -77.09 22 A VAL 71 -62.43 73.67 22 A THR 72 -39.82 154.80 22 A ALA 73 171.66 175.70 23 A ALA 6 -104.23 67.44 23 A PRO 11 -79.11 49.40 23 A ASP 12 -175.94 33.95 23 A LYS 13 -85.33 42.27 23 A CYS 15 179.77 -178.56 23 A TYR 18 178.87 127.07 23 A SER 29 -97.19 -71.15 23 A SER 30 -139.60 -159.26 23 A LYS 40 -178.42 104.88 23 A THR 47 -60.80 -151.82 23 A ARG 49 -111.33 -83.57 23 A VAL 71 -63.60 93.24 23 A THR 72 -55.43 -141.47 23 A ALA 73 80.01 86.39 24 A ASP 2 66.80 176.29 24 A THR 3 63.06 154.20 24 A LEU 4 -41.98 94.52 24 A ALA 6 53.91 102.24 24 A SER 7 -63.69 -168.66 24 A ARG 10 55.96 72.63 24 A TYR 18 178.78 126.61 24 A SER 29 -90.18 -63.41 24 A GLN 36 -110.33 50.83 24 A CYS 38 -63.20 -171.94 24 A PRO 41 -72.19 -165.52 24 A THR 47 -62.85 -152.80 24 A ARG 49 -122.07 -77.44 24 A VAL 71 -54.09 87.80 24 A THR 72 -42.03 168.66 25 A ALA 6 -136.15 -35.19 25 A SER 7 179.98 136.07 25 A TRP 8 -174.54 46.34 25 A HIS 9 -153.16 73.42 25 A CYS 15 -173.48 -172.93 25 A TYR 18 178.82 126.33 25 A SER 29 -99.75 -69.94 25 A LYS 40 -160.12 93.85 25 A THR 47 -59.05 -149.98 25 A ARG 49 -128.41 -81.70 25 A VAL 71 -61.59 84.03 25 A THR 72 -34.47 145.97 25 A ALA 73 -128.20 -153.93 SOLUTION STRUCTURE OF VIRUS CHEMOKINE VMIP-II 1 N N A ASP 60 A ASP 60 HELX_P A GLN 68 A GLN 68 1 1 9 disulf 2.021 A CYS 14 A SG CYS 14 1_555 A CYS 38 A SG CYS 38 1_555 disulf 2.020 A CYS 15 A SG CYS 15 1_555 A CYS 54 A SG CYS 54 1_555 covale 1.303 both A LEU 65 A C LEU 65 1_555 A MSE 66 A N MSE 66 1_555 covale 1.306 both A MSE 66 A C MSE 66 1_555 A GLN 67 A N GLN 67 1_555 VIRAL PROTEIN VMIP-II, VIRUS CHEMOKINE, KSHV(HUMAN HERPESVIRUS 8), RECEPTOR BINDING, Viral protein VMI2_HHV8 UNP 1 Q98157 21 94 1HHV 1 74 Q98157 A 1 1 74 3 anti-parallel A SER 30 A SER 30 A PRO 33 A PRO 33 A VAL 43 A VAL 43 A LEU 46 A LEU 46 A GLN 52 A GLN 52 A ALA 55 A ALA 55