0.013962
0.008061
0.000000
0.000000
0.016122
0.000000
0.000000
0.000000
0.006502
0.00000
0.00000
0.00000
Cervoni, L.
Lascu, I.
Xu, Y.
Gonin, P.
Morr, M.
Merouani, M.
Janin, J.
Giartoso, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
18
90.00
90.00
120.00
71.620
71.620
153.800
C10 H16 N6 O9 P2
426.216
3'-DEOXY 3'-AMINO ADENOSINE-5'-DIPHOSPHATE
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
P
N
2
N
O
N
3
N
O
N
4
N
O
N
5
R
P
N
6
N
O
N
7
N
O
N
8
N
O
N
9
N
O
N
10
N
C
N
11
S
C
N
12
N
O
N
13
S
C
N
14
N
N
N
15
R
C
N
16
N
O
N
17
R
C
Y
18
N
N
Y
19
N
C
Y
20
N
N
Y
21
N
C
Y
22
N
C
N
23
N
N
Y
24
N
N
Y
25
N
C
Y
26
N
N
Y
27
N
C
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
N
N
45
S
C
N
46
N
C
N
47
N
O
N
48
N
C
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
N
N
58
S
C
N
59
N
C
N
60
N
O
N
61
N
C
N
62
N
C
N
63
N
C
N
64
N
N
N
65
N
C
N
66
N
N
N
67
N
N
N
68
N
O
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
N
N
85
S
C
N
86
N
C
N
87
N
O
N
88
N
C
N
89
N
C
N
90
N
O
N
91
N
N
N
92
N
O
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
N
N
102
S
C
N
103
N
C
N
104
N
O
N
105
N
C
N
106
N
C
N
107
N
O
N
108
N
O
N
109
N
O
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
N
N
118
S
C
N
119
N
C
N
120
N
O
N
121
N
C
N
122
N
C
N
123
N
C
N
124
N
O
N
125
N
N
N
126
N
O
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
N
142
N
C
N
143
N
C
N
144
N
O
N
145
N
O
N
146
N
O
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
N
N
157
N
C
N
158
N
C
N
159
N
O
N
160
N
O
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
N
N
167
S
C
N
168
N
C
N
169
N
O
N
170
N
C
Y
171
N
C
Y
172
N
N
Y
173
N
C
Y
174
N
C
Y
175
N
N
N
176
N
O
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
O
N
188
N
H
N
189
N
H
N
190
N
N
N
191
S
C
N
192
N
C
N
193
N
O
N
194
S
C
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
O
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
N
N
213
S
C
N
214
N
C
N
215
N
O
N
216
N
C
N
217
N
C
N
218
N
C
N
219
N
C
N
220
N
O
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
N
N
235
S
C
N
236
N
C
N
237
N
O
N
238
N
C
N
239
N
C
N
240
N
C
N
241
N
C
N
242
N
N
N
243
N
O
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
N
C
N
264
N
C
N
265
N
S
N
266
N
C
N
267
N
O
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
N
N
280
S
C
N
281
N
C
N
282
N
O
N
283
N
C
Y
284
N
C
Y
285
N
C
Y
286
N
C
Y
287
N
C
Y
288
N
C
Y
289
N
C
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
N
N
303
S
C
N
304
N
C
N
305
N
O
N
306
N
C
N
307
N
C
N
308
N
C
N
309
N
O
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
N
N
320
S
C
N
321
N
C
N
322
N
O
N
323
N
C
N
324
N
O
N
325
N
O
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
N
N
334
S
C
N
335
N
C
N
336
N
O
N
337
R
C
N
338
N
O
N
339
N
C
N
340
N
O
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
N
N
351
S
C
N
352
N
C
N
353
N
O
N
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
N
Y
359
N
C
Y
360
N
C
Y
361
N
C
Y
362
N
C
Y
363
N
C
N
364
N
O
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
N
N
378
S
C
N
379
N
C
N
380
N
O
N
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
C
Y
385
N
C
Y
386
N
C
Y
387
N
C
N
388
N
O
N
389
N
O
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
N
N
402
S
C
N
403
N
C
N
404
N
O
N
405
N
C
N
406
N
C
N
407
N
C
N
408
N
O
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
doub
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
Y
31
N
sing
Y
32
N
sing
Y
33
N
doub
N
34
N
sing
Y
35
N
sing
Y
36
N
doub
Y
37
N
sing
N
38
N
sing
Y
39
N
sing
N
40
N
sing
N
41
N
sing
Y
42
N
doub
Y
43
N
sing
N
44
N
sing
Y
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
doub
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
doub
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
doub
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
doub
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
doub
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
doub
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
doub
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
Y
172
N
sing
Y
173
N
doub
Y
174
N
doub
N
175
N
sing
Y
176
N
sing
N
177
N
sing
Y
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
doub
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
doub
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
doub
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
Y
280
N
doub
Y
281
N
sing
Y
282
N
sing
N
283
N
sing
Y
284
N
doub
N
285
N
sing
Y
286
N
doub
N
287
N
sing
Y
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
doub
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
doub
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
doub
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
Y
349
N
doub
Y
350
N
sing
Y
351
N
sing
N
352
N
sing
Y
353
N
doub
Y
354
N
sing
Y
355
N
sing
N
356
N
sing
Y
357
N
sing
Y
358
N
doub
N
359
N
sing
Y
360
N
doub
N
361
N
sing
Y
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
doub
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
Y
377
N
doub
Y
378
N
sing
Y
379
N
sing
N
380
N
sing
Y
381
N
doub
N
382
N
sing
Y
383
N
doub
N
384
N
sing
Y
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
doub
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
40
4583
10.1021/BI002432S
11294625
Binding of Nucleotides to Nucleoside Diphosphate Kinase: A Calorimetric Study.
2001
10.2210/pdb1hiy/pdb
pdb_00001hiy
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
277.0
1
IMAGE PLATE
SINGLE WAVELENGTH
M
x-ray
1
0.97
1.0
DW32
LURE
0.97
0.97
SYNCHROTRON
LURE BEAMLINE DW32
3'AMINO-ADP
16816.336
NUCLEOSIDE DIPHOSPHATE KINASE
2.7.4.6
3
man
polymer
426.216
3'-DEOXY 3'-AMINO ADENOSINE-5'-DIPHOSPHATE
3
syn
non-polymer
18.015
water
41
nat
water
no
no
MSTNKVNKERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAM
VFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIHGSDSVESANREIALWFKPEELLTEVKPNPNLYE
MSTNKVNKERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAM
VFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIHGSDSVESANREIALWFKPEELLTEVKPNPNLYE
A,B,C
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
44689
DICTYOSTELIUM DISCOIDEUM
562
ESCHERICHIA COLI
1
2.26
31
VAPOR DIFFUSION, HANGING DROP
8.50
METHOD: HANGING DROP IN DROP: 5MG/ML PROTEIN, 50 MM TRIS HCL PH8.5, 8.5MM 3'-AMINO-ADP,15-16% PEG550, 20MM MGCL2 IN WELL: 30-32% PEG550, 50MM TRISHCL PH8.5., pH 8.50
diffrn_detector
diffrn_source
database_PDB_rev
database_PDB_rev_record
exptl_crystal_grow
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Data collection
Data collection
Experimental preparation
Data collection
Database references
Other
Refinement description
1
0
2001-05-31
1
1
2011-05-08
1
2
2011-07-13
1
3
2018-02-28
1
4
2019-05-08
1
5
2023-12-13
_diffrn_detector.detector
_diffrn_source.pdbx_wavelength_list
_exptl_crystal_grow.method
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
STRUCTURE OF NUCLEOSIDE DIPHOSPHATE KINASE H122G MUTANT
3'-FLUORO-URIDINE DIPHOSPHATE BINDING TO NUCLEOSIDE DIPHOSPHATE KINASE
3'-PHOSPHORYLATED NUCLEOTIDES BINDING TO NUCLEOSIDE DIPHOSPHATE KINASE
STRUCTURE OF THE H122G NUCLEOSIDE DIPHOSPHATE KINASE / D4T- TRIPHOSPHATE.MG COMPLEX
STRUCTURE OF THE NUCLEOSIDE DIPHOSPHATE KINASE/ALPHA-BORANO(RP)-TDP.MG COMPLEX
ROLE OF ACTIVE SITE RESIUDE LYS16 IN NUCLEOSIDE DIPHOSPHATE KINASE
STRUCTURE OF NUCLEOSIDE DIPHOSPHATE KINASE
P100S NUCLEOSIDE DIPHOSPHATE KINASE
AZT DIPHOSPHATE BINDING TO NUCLEOSIDE DIPHOSPHATE KINASE
THERMAL STABILITY OF HEXAMERIC AND TETRAMERIC NUCLEOSIDE, DIPHOSPHATE KINASES
CRYSTAL STRUCTURE OF NDP KINASE COMPLEXED WITH MG, ADP, AND BEF3
PDBE
Y
PDBE
2001-01-05
REL
REL
3AN
3'-DEOXY 3'-AMINO ADENOSINE-5'-DIPHOSPHATE
HOH
water
PLAYS A MAJOR ROLE IN THE SYNTHESIS OF NUCLEOSIDE TRIPHOSPHATES
OTHER THAN ATP.
1KDN
PDB
experimental model
3AN
1156
2
3AN
3AN
1156
A
3AN
1356
2
3AN
3AN
1356
B
3AN
1556
2
3AN
3AN
1556
C
HOH
2001
3
HOH
HOH
2001
A
HOH
2002
3
HOH
HOH
2002
A
HOH
2003
3
HOH
HOH
2003
A
HOH
2004
3
HOH
HOH
2004
A
HOH
2005
3
HOH
HOH
2005
A
HOH
2006
3
HOH
HOH
2006
A
HOH
2007
3
HOH
HOH
2007
A
HOH
2008
3
HOH
HOH
2008
A
HOH
2009
3
HOH
HOH
2009
A
HOH
2010
3
HOH
HOH
2010
A
HOH
2011
3
HOH
HOH
2011
A
HOH
2012
3
HOH
HOH
2012
A
HOH
2013
3
HOH
HOH
2013
A
HOH
2014
3
HOH
HOH
2014
A
HOH
2001
3
HOH
HOH
2001
B
HOH
2002
3
HOH
HOH
2002
B
HOH
2003
3
HOH
HOH
2003
B
HOH
2004
3
HOH
HOH
2004
B
HOH
2005
3
HOH
HOH
2005
B
HOH
2006
3
HOH
HOH
2006
B
HOH
2007
3
HOH
HOH
2007
B
HOH
2008
3
HOH
HOH
2008
B
HOH
2009
3
HOH
HOH
2009
B
HOH
2010
3
HOH
HOH
2010
B
HOH
2011
3
HOH
HOH
2011
B
HOH
2012
3
HOH
HOH
2012
B
HOH
2013
3
HOH
HOH
2013
B
HOH
2014
3
HOH
HOH
2014
B
HOH
2015
3
HOH
HOH
2015
B
HOH
2016
3
HOH
HOH
2016
B
HOH
2017
3
HOH
HOH
2017
B
HOH
2018
3
HOH
HOH
2018
B
HOH
2019
3
HOH
HOH
2019
B
HOH
2001
3
HOH
HOH
2001
C
HOH
2002
3
HOH
HOH
2002
C
HOH
2003
3
HOH
HOH
2003
C
HOH
2004
3
HOH
HOH
2004
C
HOH
2005
3
HOH
HOH
2005
C
HOH
2006
3
HOH
HOH
2006
C
HOH
2007
3
HOH
HOH
2007
C
HOH
2008
3
HOH
HOH
2008
C
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
VAL
6
n
6
VAL
6
A
ASN
7
n
7
ASN
7
A
LYS
8
n
8
LYS
8
A
GLU
9
n
9
GLU
9
A
ARG
10
n
10
ARG
10
A
THR
11
n
11
THR
11
A
PHE
12
n
12
PHE
12
A
LEU
13
n
13
LEU
13
A
ALA
14
n
14
ALA
14
A
VAL
15
n
15
VAL
15
A
LYS
16
n
16
LYS
16
A
PRO
17
n
17
PRO
17
A
ASP
18
n
18
ASP
18
A
GLY
19
n
19
GLY
19
A
VAL
20
n
20
VAL
20
A
ALA
21
n
21
ALA
21
A
ARG
22
n
22
ARG
22
A
GLY
23
n
23
GLY
23
A
LEU
24
n
24
LEU
24
A
VAL
25
n
25
VAL
25
A
GLY
26
n
26
GLY
26
A
GLU
27
n
27
GLU
27
A
ILE
28
n
28
ILE
28
A
ILE
29
n
29
ILE
29
A
ALA
30
n
30
ALA
30
A
ARG
31
n
31
ARG
31
A
TYR
32
n
32
TYR
32
A
GLU
33
n
33
GLU
33
A
LYS
34
n
34
LYS
34
A
LYS
35
n
35
LYS
35
A
GLY
36
n
36
GLY
36
A
PHE
37
n
37
PHE
37
A
VAL
38
n
38
VAL
38
A
LEU
39
n
39
LEU
39
A
VAL
40
n
40
VAL
40
A
GLY
41
n
41
GLY
41
A
LEU
42
n
42
LEU
42
A
LYS
43
n
43
LYS
43
A
GLN
44
n
44
GLN
44
A
LEU
45
n
45
LEU
45
A
VAL
46
n
46
VAL
46
A
PRO
47
n
47
PRO
47
A
THR
48
n
48
THR
48
A
LYS
49
n
49
LYS
49
A
ASP
50
n
50
ASP
50
A
LEU
51
n
51
LEU
51
A
ALA
52
n
52
ALA
52
A
GLU
53
n
53
GLU
53
A
SER
54
n
54
SER
54
A
HIS
55
n
55
HIS
55
A
TYR
56
n
56
TYR
56
A
ALA
57
n
57
ALA
57
A
GLU
58
n
58
GLU
58
A
HIS
59
n
59
HIS
59
A
LYS
60
n
60
LYS
60
A
GLU
61
n
61
GLU
61
A
ARG
62
n
62
ARG
62
A
PRO
63
n
63
PRO
63
A
PHE
64
n
64
PHE
64
A
PHE
65
n
65
PHE
65
A
GLY
66
n
66
GLY
66
A
GLY
67
n
67
GLY
67
A
LEU
68
n
68
LEU
68
A
VAL
69
n
69
VAL
69
A
SER
70
n
70
SER
70
A
PHE
71
n
71
PHE
71
A
ILE
72
n
72
ILE
72
A
THR
73
n
73
THR
73
A
SER
74
n
74
SER
74
A
GLY
75
n
75
GLY
75
A
PRO
76
n
76
PRO
76
A
VAL
77
n
77
VAL
77
A
VAL
78
n
78
VAL
78
A
ALA
79
n
79
ALA
79
A
MET
80
n
80
MET
80
A
VAL
81
n
81
VAL
81
A
PHE
82
n
82
PHE
82
A
GLU
83
n
83
GLU
83
A
GLY
84
n
84
GLY
84
A
LYS
85
n
85
LYS
85
A
GLY
86
n
86
GLY
86
A
VAL
87
n
87
VAL
87
A
VAL
88
n
88
VAL
88
A
ALA
89
n
89
ALA
89
A
SER
90
n
90
SER
90
A
ALA
91
n
91
ALA
91
A
ARG
92
n
92
ARG
92
A
LEU
93
n
93
LEU
93
A
MET
94
n
94
MET
94
A
ILE
95
n
95
ILE
95
A
GLY
96
n
96
GLY
96
A
VAL
97
n
97
VAL
97
A
THR
98
n
98
THR
98
A
ASN
99
n
99
ASN
99
A
PRO
100
n
100
PRO
100
A
LEU
101
n
101
LEU
101
A
ALA
102
n
102
ALA
102
A
SER
103
n
103
SER
103
A
ALA
104
n
104
ALA
104
A
PRO
105
n
105
PRO
105
A
GLY
106
n
106
GLY
106
A
SER
107
n
107
SER
107
A
ILE
108
n
108
ILE
108
A
ARG
109
n
109
ARG
109
A
GLY
110
n
110
GLY
110
A
ASP
111
n
111
ASP
111
A
PHE
112
n
112
PHE
112
A
GLY
113
n
113
GLY
113
A
VAL
114
n
114
VAL
114
A
ASP
115
n
115
ASP
115
A
VAL
116
n
116
VAL
116
A
GLY
117
n
117
GLY
117
A
ARG
118
n
118
ARG
118
A
ASN
119
n
119
ASN
119
A
ILE
120
n
120
ILE
120
A
ILE
121
n
121
ILE
121
A
HIS
122
n
122
HIS
122
A
GLY
123
n
123
GLY
123
A
SER
124
n
124
SER
124
A
ASP
125
n
125
ASP
125
A
SER
126
n
126
SER
126
A
VAL
127
n
127
VAL
127
A
GLU
128
n
128
GLU
128
A
SER
129
n
129
SER
129
A
ALA
130
n
130
ALA
130
A
ASN
131
n
131
ASN
131
A
ARG
132
n
132
ARG
132
A
GLU
133
n
133
GLU
133
A
ILE
134
n
134
ILE
134
A
ALA
135
n
135
ALA
135
A
LEU
136
n
136
LEU
136
A
TRP
137
n
137
TRP
137
A
PHE
138
n
138
PHE
138
A
LYS
139
n
139
LYS
139
A
PRO
140
n
140
PRO
140
A
GLU
141
n
141
GLU
141
A
GLU
142
n
142
GLU
142
A
LEU
143
n
143
LEU
143
A
LEU
144
n
144
LEU
144
A
THR
145
n
145
THR
145
A
GLU
146
n
146
GLU
146
A
VAL
147
n
147
VAL
147
A
LYS
148
n
148
LYS
148
A
PRO
149
n
149
PRO
149
A
ASN
150
n
150
ASN
150
A
PRO
151
n
151
PRO
151
A
ASN
152
n
152
ASN
152
A
LEU
153
n
153
LEU
153
A
TYR
154
n
154
TYR
154
A
GLU
155
n
155
GLU
155
A
n
1
201
B
n
2
202
B
n
3
203
B
n
4
204
B
n
5
205
B
VAL
206
n
6
VAL
206
B
ASN
207
n
7
ASN
207
B
LYS
208
n
8
LYS
208
B
GLU
209
n
9
GLU
209
B
ARG
210
n
10
ARG
210
B
THR
211
n
11
THR
211
B
PHE
212
n
12
PHE
212
B
LEU
213
n
13
LEU
213
B
ALA
214
n
14
ALA
214
B
VAL
215
n
15
VAL
215
B
LYS
216
n
16
LYS
216
B
PRO
217
n
17
PRO
217
B
ASP
218
n
18
ASP
218
B
GLY
219
n
19
GLY
219
B
VAL
220
n
20
VAL
220
B
ALA
221
n
21
ALA
221
B
ARG
222
n
22
ARG
222
B
GLY
223
n
23
GLY
223
B
LEU
224
n
24
LEU
224
B
VAL
225
n
25
VAL
225
B
GLY
226
n
26
GLY
226
B
GLU
227
n
27
GLU
227
B
ILE
228
n
28
ILE
228
B
ILE
229
n
29
ILE
229
B
ALA
230
n
30
ALA
230
B
ARG
231
n
31
ARG
231
B
TYR
232
n
32
TYR
232
B
GLU
233
n
33
GLU
233
B
LYS
234
n
34
LYS
234
B
LYS
235
n
35
LYS
235
B
GLY
236
n
36
GLY
236
B
PHE
237
n
37
PHE
237
B
VAL
238
n
38
VAL
238
B
LEU
239
n
39
LEU
239
B
VAL
240
n
40
VAL
240
B
GLY
241
n
41
GLY
241
B
LEU
242
n
42
LEU
242
B
LYS
243
n
43
LYS
243
B
GLN
244
n
44
GLN
244
B
LEU
245
n
45
LEU
245
B
VAL
246
n
46
VAL
246
B
PRO
247
n
47
PRO
247
B
THR
248
n
48
THR
248
B
LYS
249
n
49
LYS
249
B
ASP
250
n
50
ASP
250
B
LEU
251
n
51
LEU
251
B
ALA
252
n
52
ALA
252
B
GLU
253
n
53
GLU
253
B
SER
254
n
54
SER
254
B
HIS
255
n
55
HIS
255
B
TYR
256
n
56
TYR
256
B
ALA
257
n
57
ALA
257
B
GLU
258
n
58
GLU
258
B
HIS
259
n
59
HIS
259
B
LYS
260
n
60
LYS
260
B
GLU
261
n
61
GLU
261
B
ARG
262
n
62
ARG
262
B
PRO
263
n
63
PRO
263
B
PHE
264
n
64
PHE
264
B
PHE
265
n
65
PHE
265
B
GLY
266
n
66
GLY
266
B
GLY
267
n
67
GLY
267
B
LEU
268
n
68
LEU
268
B
VAL
269
n
69
VAL
269
B
SER
270
n
70
SER
270
B
PHE
271
n
71
PHE
271
B
ILE
272
n
72
ILE
272
B
THR
273
n
73
THR
273
B
SER
274
n
74
SER
274
B
GLY
275
n
75
GLY
275
B
PRO
276
n
76
PRO
276
B
VAL
277
n
77
VAL
277
B
VAL
278
n
78
VAL
278
B
ALA
279
n
79
ALA
279
B
MET
280
n
80
MET
280
B
VAL
281
n
81
VAL
281
B
PHE
282
n
82
PHE
282
B
GLU
283
n
83
GLU
283
B
GLY
284
n
84
GLY
284
B
LYS
285
n
85
LYS
285
B
GLY
286
n
86
GLY
286
B
VAL
287
n
87
VAL
287
B
VAL
288
n
88
VAL
288
B
ALA
289
n
89
ALA
289
B
SER
290
n
90
SER
290
B
ALA
291
n
91
ALA
291
B
ARG
292
n
92
ARG
292
B
LEU
293
n
93
LEU
293
B
MET
294
n
94
MET
294
B
ILE
295
n
95
ILE
295
B
GLY
296
n
96
GLY
296
B
VAL
297
n
97
VAL
297
B
THR
298
n
98
THR
298
B
ASN
299
n
99
ASN
299
B
PRO
300
n
100
PRO
300
B
LEU
301
n
101
LEU
301
B
ALA
302
n
102
ALA
302
B
SER
303
n
103
SER
303
B
ALA
304
n
104
ALA
304
B
PRO
305
n
105
PRO
305
B
GLY
306
n
106
GLY
306
B
SER
307
n
107
SER
307
B
ILE
308
n
108
ILE
308
B
ARG
309
n
109
ARG
309
B
GLY
310
n
110
GLY
310
B
ASP
311
n
111
ASP
311
B
PHE
312
n
112
PHE
312
B
GLY
313
n
113
GLY
313
B
VAL
314
n
114
VAL
314
B
ASP
315
n
115
ASP
315
B
VAL
316
n
116
VAL
316
B
GLY
317
n
117
GLY
317
B
ARG
318
n
118
ARG
318
B
ASN
319
n
119
ASN
319
B
ILE
320
n
120
ILE
320
B
ILE
321
n
121
ILE
321
B
HIS
322
n
122
HIS
322
B
GLY
323
n
123
GLY
323
B
SER
324
n
124
SER
324
B
ASP
325
n
125
ASP
325
B
SER
326
n
126
SER
326
B
VAL
327
n
127
VAL
327
B
GLU
328
n
128
GLU
328
B
SER
329
n
129
SER
329
B
ALA
330
n
130
ALA
330
B
ASN
331
n
131
ASN
331
B
ARG
332
n
132
ARG
332
B
GLU
333
n
133
GLU
333
B
ILE
334
n
134
ILE
334
B
ALA
335
n
135
ALA
335
B
LEU
336
n
136
LEU
336
B
TRP
337
n
137
TRP
337
B
PHE
338
n
138
PHE
338
B
LYS
339
n
139
LYS
339
B
PRO
340
n
140
PRO
340
B
GLU
341
n
141
GLU
341
B
GLU
342
n
142
GLU
342
B
LEU
343
n
143
LEU
343
B
LEU
344
n
144
LEU
344
B
THR
345
n
145
THR
345
B
GLU
346
n
146
GLU
346
B
VAL
347
n
147
VAL
347
B
LYS
348
n
148
LYS
348
B
PRO
349
n
149
PRO
349
B
ASN
350
n
150
ASN
350
B
PRO
351
n
151
PRO
351
B
ASN
352
n
152
ASN
352
B
LEU
353
n
153
LEU
353
B
TYR
354
n
154
TYR
354
B
GLU
355
n
155
GLU
355
B
n
1
401
C
n
2
402
C
n
3
403
C
n
4
404
C
n
5
405
C
VAL
406
n
6
VAL
406
C
ASN
407
n
7
ASN
407
C
LYS
408
n
8
LYS
408
C
GLU
409
n
9
GLU
409
C
ARG
410
n
10
ARG
410
C
THR
411
n
11
THR
411
C
PHE
412
n
12
PHE
412
C
LEU
413
n
13
LEU
413
C
ALA
414
n
14
ALA
414
C
VAL
415
n
15
VAL
415
C
LYS
416
n
16
LYS
416
C
PRO
417
n
17
PRO
417
C
ASP
418
n
18
ASP
418
C
GLY
419
n
19
GLY
419
C
VAL
420
n
20
VAL
420
C
ALA
421
n
21
ALA
421
C
ARG
422
n
22
ARG
422
C
GLY
423
n
23
GLY
423
C
LEU
424
n
24
LEU
424
C
VAL
425
n
25
VAL
425
C
GLY
426
n
26
GLY
426
C
GLU
427
n
27
GLU
427
C
ILE
428
n
28
ILE
428
C
ILE
429
n
29
ILE
429
C
ALA
430
n
30
ALA
430
C
ARG
431
n
31
ARG
431
C
TYR
432
n
32
TYR
432
C
GLU
433
n
33
GLU
433
C
LYS
434
n
34
LYS
434
C
LYS
435
n
35
LYS
435
C
GLY
436
n
36
GLY
436
C
PHE
437
n
37
PHE
437
C
VAL
438
n
38
VAL
438
C
LEU
439
n
39
LEU
439
C
VAL
440
n
40
VAL
440
C
GLY
441
n
41
GLY
441
C
LEU
442
n
42
LEU
442
C
LYS
443
n
43
LYS
443
C
GLN
444
n
44
GLN
444
C
LEU
445
n
45
LEU
445
C
VAL
446
n
46
VAL
446
C
PRO
447
n
47
PRO
447
C
THR
448
n
48
THR
448
C
LYS
449
n
49
LYS
449
C
ASP
450
n
50
ASP
450
C
LEU
451
n
51
LEU
451
C
ALA
452
n
52
ALA
452
C
GLU
453
n
53
GLU
453
C
SER
454
n
54
SER
454
C
HIS
455
n
55
HIS
455
C
TYR
456
n
56
TYR
456
C
ALA
457
n
57
ALA
457
C
GLU
458
n
58
GLU
458
C
HIS
459
n
59
HIS
459
C
LYS
460
n
60
LYS
460
C
GLU
461
n
61
GLU
461
C
ARG
462
n
62
ARG
462
C
PRO
463
n
63
PRO
463
C
PHE
464
n
64
PHE
464
C
PHE
465
n
65
PHE
465
C
GLY
466
n
66
GLY
466
C
GLY
467
n
67
GLY
467
C
LEU
468
n
68
LEU
468
C
VAL
469
n
69
VAL
469
C
SER
470
n
70
SER
470
C
PHE
471
n
71
PHE
471
C
ILE
472
n
72
ILE
472
C
THR
473
n
73
THR
473
C
SER
474
n
74
SER
474
C
GLY
475
n
75
GLY
475
C
PRO
476
n
76
PRO
476
C
VAL
477
n
77
VAL
477
C
VAL
478
n
78
VAL
478
C
ALA
479
n
79
ALA
479
C
MET
480
n
80
MET
480
C
VAL
481
n
81
VAL
481
C
PHE
482
n
82
PHE
482
C
GLU
483
n
83
GLU
483
C
GLY
484
n
84
GLY
484
C
LYS
485
n
85
LYS
485
C
GLY
486
n
86
GLY
486
C
VAL
487
n
87
VAL
487
C
VAL
488
n
88
VAL
488
C
ALA
489
n
89
ALA
489
C
SER
490
n
90
SER
490
C
ALA
491
n
91
ALA
491
C
ARG
492
n
92
ARG
492
C
LEU
493
n
93
LEU
493
C
MET
494
n
94
MET
494
C
ILE
495
n
95
ILE
495
C
GLY
496
n
96
GLY
496
C
VAL
497
n
97
VAL
497
C
THR
498
n
98
THR
498
C
ASN
499
n
99
ASN
499
C
PRO
500
n
100
PRO
500
C
LEU
501
n
101
LEU
501
C
ALA
502
n
102
ALA
502
C
SER
503
n
103
SER
503
C
ALA
504
n
104
ALA
504
C
PRO
505
n
105
PRO
505
C
GLY
506
n
106
GLY
506
C
SER
507
n
107
SER
507
C
ILE
508
n
108
ILE
508
C
ARG
509
n
109
ARG
509
C
GLY
510
n
110
GLY
510
C
ASP
511
n
111
ASP
511
C
PHE
512
n
112
PHE
512
C
GLY
513
n
113
GLY
513
C
VAL
514
n
114
VAL
514
C
ASP
515
n
115
ASP
515
C
VAL
516
n
116
VAL
516
C
GLY
517
n
117
GLY
517
C
ARG
518
n
118
ARG
518
C
ASN
519
n
119
ASN
519
C
ILE
520
n
120
ILE
520
C
ILE
521
n
121
ILE
521
C
HIS
522
n
122
HIS
522
C
GLY
523
n
123
GLY
523
C
SER
524
n
124
SER
524
C
ASP
525
n
125
ASP
525
C
SER
526
n
126
SER
526
C
VAL
527
n
127
VAL
527
C
GLU
528
n
128
GLU
528
C
SER
529
n
129
SER
529
C
ALA
530
n
130
ALA
530
C
ASN
531
n
131
ASN
531
C
ARG
532
n
132
ARG
532
C
GLU
533
n
133
GLU
533
C
ILE
534
n
134
ILE
534
C
ALA
535
n
135
ALA
535
C
LEU
536
n
136
LEU
536
C
TRP
537
n
137
TRP
537
C
PHE
538
n
138
PHE
538
C
LYS
539
n
139
LYS
539
C
PRO
540
n
140
PRO
540
C
GLU
541
n
141
GLU
541
C
GLU
542
n
142
GLU
542
C
LEU
543
n
143
LEU
543
C
LEU
544
n
144
LEU
544
C
THR
545
n
145
THR
545
C
GLU
546
n
146
GLU
546
C
VAL
547
n
147
VAL
547
C
LYS
548
n
148
LYS
548
C
PRO
549
n
149
PRO
549
C
ASN
550
n
150
ASN
550
C
PRO
551
n
151
PRO
551
C
ASN
552
n
152
ASN
552
C
LEU
553
n
153
LEU
553
C
TYR
554
n
154
TYR
554
C
GLU
555
n
155
GLU
555
C
author_and_software_defined_assembly
PQS
6
hexameric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
-0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
6_765
-x+2,-x+y+1,-z+1/3
crystal symmetry operation
107.4300000000
62.0247394190
51.2666666667
A
N
LEU
45
A
N
LEU
45
A
O
VAL
77
A
O
VAL
77
A
N
PHE
82
A
N
PHE
82
A
O
THR
11
A
O
THR
11
A
N
ALA
14
A
N
ALA
14
A
O
HIS
122
A
O
HIS
122
B
N
LEU
245
B
N
LEU
45
B
O
VAL
277
B
O
VAL
77
B
N
PHE
282
B
N
PHE
82
B
O
THR
211
B
O
THR
11
B
N
ALA
214
B
N
ALA
14
B
O
HIS
322
B
O
HIS
122
C
N
LEU
445
C
N
LEU
45
C
O
VAL
477
C
O
VAL
77
C
N
PHE
482
C
N
PHE
82
C
O
THR
411
C
O
THR
11
C
N
ALA
414
C
N
ALA
14
C
O
HIS
522
C
O
HIS
122
1
A
MET
1
A
MET
1
1
Y
1
A
SER
2
A
SER
2
1
Y
1
A
THR
3
A
THR
3
1
Y
1
A
ASN
4
A
ASN
4
1
Y
1
A
LYS
5
A
LYS
5
1
Y
1
B
MET
201
B
MET
1
1
Y
1
B
SER
202
B
SER
2
1
Y
1
B
THR
203
B
THR
3
1
Y
1
B
ASN
204
B
ASN
4
1
Y
1
B
LYS
205
B
LYS
5
1
Y
1
C
MET
401
C
MET
1
1
Y
1
C
SER
402
C
SER
2
1
Y
1
C
THR
403
C
THR
3
1
Y
1
C
ASN
404
C
ASN
4
1
Y
1
C
LYS
405
C
LYS
5
1
Y
1
11.89
1.50
119.30
131.19
C
C
C
C
N
CA
GLY
PRO
PRO
475
476
476
Y
1
A
PRO
17
-49.93
-6.54
1
A
LEU
42
-177.33
138.04
1
A
TYR
56
-92.24
32.43
1
A
GLU
58
-64.92
4.28
1
A
LEU
68
-74.03
-78.65
1
A
VAL
114
-142.42
-26.31
1
A
ILE
120
69.78
-66.85
1
A
THR
145
-143.98
-54.72
1
A
PRO
151
-62.75
16.04
1
B
ASN
207
-74.30
26.68
1
B
LYS
243
-173.99
147.63
1
B
GLU
258
-34.87
-19.42
1
B
PHE
264
-63.17
9.85
1
B
SER
274
-67.60
20.29
1
B
ARG
318
-119.68
78.28
1
B
ILE
320
58.29
-46.92
1
B
PRO
340
-32.39
-38.36
1
C
LEU
442
178.26
142.37
1
C
LYS
443
-178.85
133.82
1
C
LEU
445
173.31
167.10
1
C
TYR
456
-89.93
45.08
1
C
THR
473
-140.01
10.86
1
C
VAL
514
-152.70
-13.59
1
C
ARG
518
-107.15
59.97
1
C
ILE
520
64.89
-58.00
1
C
THR
545
-131.84
-51.86
30.3
0.325
0.22
0.22
2.6
15
13728
7.0
94.3
RANDOM
1
2
MOLECULAR REPLACEMENT
1KDN
2.6
15
41
3563
81
0
3441
0.014
1.9
1.68
1
BACKBOND RESTRAINTS
1
X-RAY DIFFRACTION
27.0
2.200
15.000
1HIY
23760
2.000
0.04900
1
4.000
99.7
refinement
X-PLOR
3.8
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
Binding of nucleotides to NDP kinase
1
N
N
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
A
LYS
16
A
LYS
16
HELX_P
A
ARG
22
A
ARG
22
1
1
7
A
LEU
24
A
LEU
24
HELX_P
A
GLY
36
A
GLY
36
1
2
13
A
THR
48
A
THR
48
HELX_P
A
TYR
56
A
TYR
56
1
3
9
A
ALA
57
A
ALA
57
HELX_P
A
LYS
60
A
LYS
60
5
4
4
A
PRO
63
A
PRO
63
HELX_P
A
THR
73
A
THR
73
1
5
11
A
GLY
86
A
GLY
86
HELX_P
A
GLY
96
A
GLY
96
1
6
11
A
ASN
99
A
ASN
99
HELX_P
A
SER
103
A
SER
103
5
7
5
A
SER
107
A
SER
107
HELX_P
A
GLY
113
A
GLY
113
1
8
7
A
SER
126
A
SER
126
HELX_P
A
PHE
138
A
PHE
138
1
9
13
A
LYS
139
A
LYS
139
HELX_P
A
LEU
143
A
LEU
143
5
10
5
B
LYS
216
B
LYS
16
HELX_P
B
ALA
221
B
ALA
21
1
11
6
B
LEU
224
B
LEU
24
HELX_P
B
GLY
236
B
GLY
36
1
12
13
B
THR
248
B
THR
48
HELX_P
B
TYR
256
B
TYR
56
1
13
9
B
ALA
257
B
ALA
57
HELX_P
B
LYS
260
B
LYS
60
5
14
4
B
PHE
264
B
PHE
64
HELX_P
B
SER
274
B
SER
74
1
15
11
B
GLY
286
B
GLY
86
HELX_P
B
GLY
296
B
GLY
96
1
16
11
B
SER
307
B
SER
107
HELX_P
B
GLY
313
B
GLY
113
1
17
7
B
SER
326
B
SER
126
HELX_P
B
PHE
338
B
PHE
138
1
18
13
C
LYS
416
C
LYS
16
HELX_P
C
ALA
421
C
ALA
21
1
19
6
C
LEU
424
C
LEU
24
HELX_P
C
GLY
436
C
GLY
36
1
20
13
C
THR
448
C
THR
48
HELX_P
C
TYR
456
C
TYR
56
1
21
9
C
ALA
457
C
ALA
57
HELX_P
C
LYS
460
C
LYS
60
5
22
4
C
PHE
465
C
PHE
65
HELX_P
C
SER
470
C
SER
70
1
23
6
C
GLY
486
C
GLY
86
HELX_P
C
GLY
496
C
GLY
96
1
24
11
C
ASN
499
C
ASN
99
HELX_P
C
SER
503
C
SER
103
5
25
5
C
SER
507
C
SER
107
HELX_P
C
GLY
513
C
GLY
113
1
26
7
C
SER
526
C
SER
126
HELX_P
C
PHE
538
C
PHE
138
1
27
13
TRANSFERASE
METABOLIC ROLE, TRANSFERASE, KINASE
NDKC_DICDI
UNP
1
P22887
1
155
1HIY
1
155
P22887
A
1
1
155
1
155
1HIY
201
355
P22887
B
1
1
155
1
155
1HIY
401
555
P22887
C
1
1
155
4
4
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
38
A
VAL
38
A
LEU
45
A
LEU
45
A
VAL
77
A
VAL
77
A
GLU
83
A
GLU
83
A
ARG
10
A
ARG
10
A
VAL
15
A
VAL
15
A
ILE
121
A
ILE
121
A
GLY
123
A
GLY
123
B
VAL
238
B
VAL
38
B
LEU
245
B
LEU
45
B
VAL
277
B
VAL
77
B
GLU
283
B
GLU
83
B
ARG
210
B
ARG
10
B
VAL
215
B
VAL
15
B
ILE
321
B
ILE
121
B
GLY
323
B
GLY
123
C
VAL
438
C
VAL
38
C
LEU
445
C
LEU
45
C
VAL
477
C
VAL
77
C
GLU
483
C
GLU
83
C
ARG
410
C
ARG
10
C
VAL
415
C
VAL
15
C
ILE
521
C
ILE
121
C
HIS
522
C
HIS
122
BINDING SITE FOR RESIDUE 3AN A1156
Software
8
BINDING SITE FOR RESIDUE 3AN B1356
Software
8
BINDING SITE FOR RESIDUE 3AN C1556
Software
9
A
HIS
59
A
HIS
59
8
1_555
A
PHE
64
A
PHE
64
8
1_555
A
LEU
68
A
LEU
68
8
1_555
A
ARG
92
A
ARG
92
8
1_555
A
THR
98
A
THR
98
8
1_555
A
ARG
109
A
ARG
109
8
1_555
A
VAL
116
A
VAL
116
8
1_555
A
ASN
119
A
ASN
119
8
1_555
A
LYS
60
A
LYS
60
8
1_555
B
LYS
216
B
LYS
16
8
1_555
B
HIS
259
B
HIS
59
8
1_555
B
LEU
268
B
LEU
68
8
1_555
B
ARG
292
B
ARG
92
8
1_555
B
THR
298
B
THR
98
8
1_555
B
ASN
319
B
ASN
119
8
1_555
B
HOH
2011
H
HOH
8
1_555
C
LYS
416
C
LYS
16
9
1_555
C
HIS
459
C
HIS
59
9
1_555
C
PHE
464
C
PHE
64
9
1_555
C
LEU
468
C
LEU
68
9
1_555
C
ARG
492
C
ARG
92
9
1_555
C
THR
498
C
THR
98
9
1_555
C
ARG
509
C
ARG
109
9
1_555
C
VAL
516
C
VAL
116
9
1_555
C
ASN
519
C
ASN
119
9
1_555
152
P 31 2 1