0.009788
0.000000
0.000000
0.000000
0.009151
0.000000
0.000000
0.000000
0.007849
0.00000
0.00000
0.00000
Tahirov, T.H.
Ogata, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
102.165
109.273
127.405
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
O
N
89
N
P
N
90
N
O
N
91
N
O
N
92
N
O
N
93
N
C
N
94
R
C
N
95
N
O
N
96
S
C
N
97
N
O
N
98
N
C
N
99
R
C
Y
100
N
N
Y
101
N
C
Y
102
N
N
Y
103
N
C
Y
104
N
C
N
105
N
N
Y
106
N
N
Y
107
N
C
Y
108
N
N
Y
109
N
C
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
O
N
125
N
P
N
126
N
O
N
127
N
O
N
128
N
O
N
129
N
C
N
130
R
C
N
131
N
O
N
132
S
C
N
133
N
O
N
134
N
C
N
135
R
C
N
136
N
N
N
137
N
C
N
138
N
O
N
139
N
N
N
140
N
C
N
141
N
N
N
142
N
C
N
143
N
C
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
P
N
160
N
O
N
161
N
O
N
162
N
O
N
163
N
C
N
164
R
C
N
165
N
O
N
166
S
C
N
167
N
O
N
168
N
C
N
169
R
C
Y
170
N
N
Y
171
N
C
Y
172
N
N
Y
173
N
C
N
174
N
C
N
175
N
O
N
176
N
N
N
177
N
C
N
178
N
N
N
179
N
N
Y
180
N
C
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
O
N
196
N
P
N
197
N
O
N
198
N
O
N
199
N
O
N
200
N
C
N
201
R
C
N
202
N
O
N
203
S
C
N
204
N
O
N
205
N
C
N
206
R
C
N
207
N
N
N
208
N
C
N
209
N
O
N
210
N
N
N
211
N
C
N
212
N
O
N
213
N
C
N
214
N
C
N
215
N
C
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
C
N
238
N
O
N
239
N
N
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
O
N
259
N
O
N
260
N
O
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
N
C
N
272
N
C
N
273
N
O
N
274
N
O
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
Y
285
N
C
Y
286
N
N
Y
287
N
C
Y
288
N
C
Y
289
N
N
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
S
C
N
306
N
C
N
307
N
C
N
308
N
C
N
309
N
O
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
N
N
324
S
C
N
325
N
C
N
326
N
O
N
327
N
C
N
328
N
C
N
329
N
C
N
330
N
C
N
331
N
O
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
N
350
N
C
N
351
N
C
N
352
N
C
N
353
N
N
N
354
N
O
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
N
N
371
S
C
N
372
N
C
N
373
N
O
N
374
N
C
N
375
N
C
N
376
N
S
N
377
N
C
N
378
N
O
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
N
N
391
S
C
N
392
N
C
N
393
N
O
N
394
N
C
Y
395
N
C
Y
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
N
401
N
O
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
N
N
414
S
C
N
415
N
C
N
416
N
O
N
417
N
C
N
418
N
C
N
419
N
C
N
420
N
O
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
N
N
431
S
C
N
432
N
C
N
433
N
O
N
434
N
C
N
435
N
O
N
436
N
O
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
N
N
445
S
C
N
446
N
C
N
447
N
O
N
448
R
C
N
449
N
O
N
450
N
C
N
451
N
O
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
N
N
462
S
C
N
463
N
C
N
464
N
O
N
465
N
C
Y
466
N
C
Y
467
N
C
Y
468
N
C
Y
469
N
N
Y
470
N
C
Y
471
N
C
Y
472
N
C
Y
473
N
C
Y
474
N
C
N
475
N
O
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
N
N
489
S
C
N
490
N
C
N
491
N
O
N
492
N
C
Y
493
N
C
Y
494
N
C
Y
495
N
C
Y
496
N
C
Y
497
N
C
Y
498
N
C
N
499
N
O
N
500
N
O
N
501
N
H
N
502
N
H
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
N
N
513
S
C
N
514
N
C
N
515
N
O
N
516
N
C
N
517
N
C
N
518
N
C
N
519
N
O
N
520
N
H
N
521
N
H
N
522
N
H
N
523
N
H
N
524
N
H
N
525
N
H
N
526
N
H
N
527
N
H
N
528
N
H
N
529
N
H
N
530
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
doub
N
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
Y
179
N
sing
Y
180
N
sing
Y
181
N
doub
N
182
N
sing
Y
183
N
sing
N
184
N
sing
Y
185
N
doub
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
doub
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
doub
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
doub
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
Y
289
N
sing
Y
290
N
doub
Y
291
N
doub
N
292
N
sing
Y
293
N
sing
N
294
N
sing
Y
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
doub
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
doub
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
doub
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
doub
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
Y
395
N
doub
Y
396
N
sing
Y
397
N
sing
N
398
N
sing
Y
399
N
doub
N
400
N
sing
Y
401
N
doub
N
402
N
sing
Y
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
doub
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
doub
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
doub
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
doub
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
Y
464
N
doub
Y
465
N
sing
Y
466
N
sing
N
467
N
sing
Y
468
N
doub
Y
469
N
sing
Y
470
N
sing
N
471
N
sing
Y
472
N
sing
Y
473
N
doub
N
474
N
sing
Y
475
N
doub
N
476
N
sing
Y
477
N
sing
N
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
doub
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
Y
492
N
doub
Y
493
N
sing
Y
494
N
sing
N
495
N
sing
Y
496
N
doub
N
497
N
sing
Y
498
N
doub
N
499
N
sing
Y
500
N
sing
N
501
N
sing
N
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
doub
N
512
N
sing
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
US
Cell(Cambridge,Mass.)
CELLB5
0998
0092-8674
104
755
10.1016/S0092-8674(01)00271-9
11257229
Structural Analyses of DNA Recognition by the Aml1/Runx-1 Runt Domain and its Allosteric Control by Cbfbeta
2001
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
57
850
10.1107/S0907444901003900
11375505
Crystallization and Preliminary X-Ray Analyses of Quaternary, Ternary and Binary Protein-DNA Complexes with Involvement of Aml1/Runx-1/Cbfalpha Runt Domain, Cbfbeta and the C/Ebpbeta bZIP Region
2001
10.2210/pdb1hjb/pdb
pdb_00001hjb
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
CCD
2000-03-01
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
0.7085
1.0
BL41XU
SPring-8
0.7085
SYNCHROTRON
SPRING-8 BEAMLINE BL41XU
10248.872
CCAAT/ENHANCER BINDING PROTEIN BETA
RESIDUES 259-345
4
man
polymer
13715.696
RUNT-RELATED TRANSCRIPTION FACTOR 1
RESIDUES 60-182
2
man
polymer
8018.176
DNA (5'-(*GP*AP*AP*GP*AP*TP*TP*TP*CP*CP* AP*AP*AP*CP*TP*CP*TP*GP*TP*GP*GP*TP*TP*GP*CP*G)-3')
FRAGMENT FROM CSF-1R PROMOTER
2
syn
polymer
7956.156
DNA (5'-(*CP*CP*GP*CP*AP*AP*CP*CP*AP*CP* AP*GP*AP*GP*TP*TP*TP*GP*GP*AP*AP*AP*TP*CP*TP*T)-3')
FRAGMENT FROM CSF-1R PROMOTER
2
syn
polymer
C/EBP BETA, NFIL-6
CORE BINDING FACTOR ALPHA, RUNX-1, AML1, PEBP2ALPHAB, CBFA2
no
no
VKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPEPL
LASSGHC
VKSKAKKTVDKHSDEYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPEPL
LASSGHC
A,B,D,E
polypeptide(L)
no
no
GELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGR
SGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQK
GELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNATAAMKNQVARFNDLRFVGR
SGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHRQK
C,F
polypeptide(L)
no
no
(DG)(DA)(DA)(DG)(DA)(DT)(DT)(DT)(DC)(DC)(DA)(DA)(DA)(DC)(DT)(DC)(DT)(DG)(DT)(DG)
(DG)(DT)(DT)(DG)(DC)(DG)
GAAGATTTCCAAACTCTGTGGTTGCG
G,I
polydeoxyribonucleotide
no
no
(DC)(DC)(DG)(DC)(DA)(DA)(DC)(DC)(DA)(DC)(DA)(DG)(DA)(DG)(DT)(DT)(DT)(DG)(DG)(DA)
(DA)(DA)(DT)(DC)(DT)(DT)
CCGCAACCACAGAGTTTGGAAATCTT
H,J
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HUMAN
sample
9606
HOMO SAPIENS
469008
ESCHERICHIA COLI
BL21(DE3)
PLASMID
PAR2156
MOUSE
sample
10090
MUS MUSCULUS
469008
ESCHERICHIA COLI
BL21(DE3)
PLASMID
PAR2156
1
3.54
64.4
VAPOR DIFFUSION, SITTING DROP
5.60
5 MM MGSO4, 3% W/V PEG 4000, 1% V/V DIOXANE, 50 MM MES BUFFER, PH 5.6 AT 24 DEGREES C
297
-6.429
1
20
G
2
H
26
-2.627
G_DA2:DT26_H
1
-7.311
0.860
-0.100
-0.316
-0.247
1
20
G
3
H
25
2.533
G_DA3:DT25_H
2
-4.242
0.358
-0.354
0.134
-0.370
1
19
G
4
H
24
4.897
G_DG4:DC24_H
3
-18.840
-0.026
-0.241
-0.108
-6.879
1
20
G
5
H
23
11.799
G_DA5:DT23_H
4
-14.297
0.322
-0.144
0.323
-1.722
1
20
G
6
H
22
1.471
G_DT6:DA22_H
5
-12.934
0.041
-0.092
-0.012
-13.831
1
20
G
7
H
21
7.167
G_DT7:DA21_H
6
-17.914
-0.512
0.517
-0.079
-12.283
1
20
G
8
H
20
3.457
G_DT8:DA20_H
7
-15.360
-0.370
0.593
-0.106
0.140
1
19
G
9
H
19
-0.322
G_DC9:DG19_H
8
-4.777
-0.250
-0.259
-0.426
-1.659
1
19
G
10
H
18
-0.438
G_DC10:DG18_H
9
2.835
-0.529
-0.313
-0.418
-5.468
1
20
G
11
H
17
-0.921
G_DA11:DT17_H
10
-3.927
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20
G
12
H
16
1.683
G_DA12:DT16_H
11
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20
G
13
H
15
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G_DA13:DT15_H
12
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1
19
G
14
H
14
-2.637
G_DC14:DG14_H
13
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1
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G
15
H
13
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G_DT15:DA13_H
14
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0.096
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1
G
16
H
12
11.555
G_DC16:DG12_H
15
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1
20
G
17
H
11
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G_DT17:DA11_H
16
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1
19
G
18
H
10
0.475
G_DG18:DC10_H
17
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2.757
1
20
G
19
H
9
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G_DT19:DA9_H
18
2.949
0.466
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1
19
G
20
H
8
0.907
G_DG20:DC8_H
19
4.117
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1
19
G
21
H
7
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G_DG21:DC7_H
20
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1
20
G
22
H
6
9.553
G_DT22:DA6_H
21
-2.106
0.293
0.197
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1
20
G
23
H
5
5.519
G_DT23:DA5_H
22
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0.918
0.450
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7.091
1
19
G
24
H
4
2.529
G_DG24:DC4_H
23
-8.702
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0.882
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13.290
1
19
G
25
H
3
-0.769
G_DC25:DG3_H
24
-7.503
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0.049
5.989
1
19
G
26
H
2
-4.022
G_DG26:DC2_H
25
-18.318
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-0.270
-0.312
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1
19
I
1
H
1
-2.585
I_DG1:DC1_H
26
-7.892
0.461
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1
20
I
2
J
26
2.069
I_DA2:DT26_J
27
-4.276
0.011
-0.231
-0.037
5.050
1
20
I
3
J
25
-3.653
I_DA3:DT25_J
28
5.005
0.041
0.114
0.121
5.353
1
19
I
4
J
24
-1.854
I_DG4:DC24_J
29
-14.521
-0.075
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-0.165
8.738
1
20
I
5
J
23
0.962
I_DA5:DT23_J
30
-14.877
0.209
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3.587
1
20
I
6
J
22
0.206
I_DT6:DA22_J
31
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0.122
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1
20
I
7
J
21
-0.790
I_DT7:DA21_J
32
-17.211
-0.023
0.183
-0.150
5.324
1
20
I
8
J
20
-0.910
I_DT8:DA20_J
33
-18.660
0.047
-0.031
-0.172
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1
19
I
9
J
19
-1.383
I_DC9:DG19_J
34
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0.048
0.024
0.007
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1
19
I
10
J
18
1.456
I_DC10:DG18_J
35
-2.146
-0.049
-0.234
-0.258
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1
20
I
11
J
17
-2.504
I_DA11:DT17_J
36
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0.002
-0.142
-0.066
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1
20
I
12
J
16
5.944
I_DA12:DT16_J
37
-6.609
0.091
0.394
-0.206
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1
20
I
13
J
15
-2.932
I_DA13:DT15_J
38
-5.140
0.194
0.193
-0.228
5.366
1
19
I
14
J
14
3.806
I_DC14:DG14_J
39
-8.474
0.189
-0.076
-0.171
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1
20
I
15
J
13
-2.074
I_DT15:DA13_J
40
0.720
-0.045
0.231
-0.171
-9.613
1
19
I
16
J
12
1.328
I_DC16:DG12_J
41
-10.598
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-0.138
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1
20
I
17
J
11
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I_DT17:DA11_J
42
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1
19
I
18
J
10
0.521
I_DG18:DC10_J
43
1.680
-0.277
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-0.211
2.920
1
20
I
19
J
9
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I_DT19:DA9_J
44
5.076
-0.198
0.147
-0.041
4.737
1
19
I
20
J
8
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I_DG20:DC8_J
45
-0.374
0.041
-0.457
-0.209
3.044
1
19
I
21
J
7
0.945
I_DG21:DC7_J
46
1.628
-0.119
0.175
-0.107
2.027
1
20
I
22
J
6
7.566
I_DT22:DA6_J
47
10.966
0.291
0.592
-0.265
-13.275
1
20
I
23
J
5
5.437
I_DT23:DA5_J
48
-4.949
-0.086
0.888
-0.251
-2.677
1
19
I
24
J
4
-4.955
I_DG24:DC4_J
49
-11.717
0.090
0.524
-0.036
-4.534
1
19
I
25
J
3
-2.248
I_DC25:DG3_J
50
-3.217
-0.057
0.674
-0.026
1.686
1
19
I
26
J
2
-2.682
I_DG26:DC2_J
51
-13.724
0.083
0.200
-0.138
2.993
31.765
G
G
2
3
5.376
H
H
26
25
3.014
2.939
-0.129
-0.115
GG_DA2DA3:DT25DT26_HH
1
-0.546
0.999
31.628
-0.706
0.144
3.234
32.540
G
G
3
4
8.918
H
H
25
24
3.256
4.977
-0.012
0.106
GG_DA3DG4:DC24DT25_HH
2
-1.266
2.268
32.143
-0.679
-0.200
3.389
38.297
G
G
4
5
-1.161
H
H
24
23
3.388
-0.761
-0.109
-0.327
GG_DG4DA5:DT23DC24_HH
3
-3.724
5.685
38.115
-0.399
-0.318
3.200
33.724
G
G
5
6
-1.745
H
H
23
22
3.148
-1.012
-0.581
-0.686
GG_DA5DT6:DA22DT23_HH
4
-2.494
4.303
33.620
-1.024
0.608
3.300
34.649
G
G
6
7
2.351
H
H
22
21
3.363
1.398
0.353
-0.427
GG_DT6DT7:DA21DA22_HH
5
-3.142
5.283
34.483
-0.936
-1.085
3.221
35.832
G
G
7
8
-2.490
H
H
21
20
3.180
-1.528
-0.501
-0.184
GG_DT7DT8:DA20DA21_HH
6
-4.195
6.835
35.562
-0.083
0.224
3.024
38.285
G
G
8
9
-13.460
H
H
20
19
2.991
-8.700
0.096
-0.660
GG_DT8DC9:DG19DA20_HH
7
7.615
-11.782
36.560
0.022
0.754
3.084
32.429
G
G
9
10
22.211
H
H
19
18
3.150
12.099
1.363
0.101
GG_DC9DC10:DG18DG19_HH
8
3.150
-5.784
29.981
-1.932
-1.890
3.214
33.883
G
G
10
11
19.288
H
H
18
17
3.352
11.037
-0.315
0.066
GG_DC10DA11:DT17DG18_HH
9
-2.519
4.403
31.989
-1.724
0.122
3.155
43.978
G
G
11
12
3.813
H
H
17
16
3.168
2.854
0.019
-0.081
GG_DA11DA12:DT16DT17_HH
10
-1.129
1.509
43.876
-0.369
-0.129
3.006
34.562
G
G
12
13
-3.619
H
H
16
15
3.019
-2.148
-0.412
-0.093
GG_DA12DA13:DT15DT16_HH
11
0.999
-1.683
34.484
0.149
0.835
3.041
25.806
G
G
13
14
5.865
H
H
15
14
3.139
2.608
0.468
-1.167
GG_DA13DC14:DG14DT15_HH
12
3.202
-7.200
25.479
-3.304
-0.199
3.536
34.205
G
G
14
15
9.991
H
H
14
13
3.775
5.848
-0.407
-1.054
GG_DC14DT15:DA13DG14_HH
13
0.901
-1.540
33.704
-2.832
0.851
3.143
38.187
G
G
15
16
2.395
H
H
13
12
3.157
1.566
1.079
0.072
GG_DT15DC16:DG12DA13_HH
14
-0.508
0.776
38.153
-0.080
-1.711
3.164
29.677
G
G
16
17
10.260
H
H
12
11
3.170
5.210
-0.698
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GG_DC16DT17:DA11DG12_HH
15
-4.332
8.530
28.909
-1.362
0.468
3.626
41.041
G
G
17
18
-4.776
H
H
11
10
3.620
-3.344
0.973
0.040
GG_DT17DG18:DC10DA11_HH
16
0.951
-1.359
40.900
0.461
-1.273
3.059
33.776
G
G
18
19
0.627
H
H
10
9
3.151
0.364
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GG_DG18DT19:DA9DC10_HH
17
3.115
-5.369
33.634
-0.087
2.010
3.525
30.541
G
G
19
20
3.627
H
H
9
8
3.557
1.909
0.017
-0.340
GG_DT19DG20:DC8DA9_HH
18
-1.469
2.791
30.448
-1.056
-0.349
3.266
37.717
G
G
20
21
14.554
H
H
8
7
3.487
9.318
-0.392
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GG_DG20DG21:DC7DC8_HH
19
0.406
-0.635
36.586
-2.019
0.662
2.746
31.948
G
G
21
22
13.074
H
H
7
6
3.048
7.138
1.049
-1.017
GG_DG21DT22:DA6DC7_HH
20
-0.205
0.375
31.160
-3.008
-1.938
2.837
37.882
G
G
22
23
14.467
H
H
6
5
3.032
9.301
-0.122
-0.436
GG_DT22DT23:DA5DA6_HH
21
1.151
-1.790
36.745
-1.758
0.323
3.146
32.025
G
G
23
24
3.660
H
H
5
4
3.062
2.014
-0.548
0.753
GG_DT23DG24:DC4DA5_HH
22
-3.815
6.936
31.740
1.019
0.337
3.033
31.910
G
G
24
25
-2.185
H
H
4
3
3.012
-1.190
0.388
-0.403
GG_DG24DC25:DG3DC4_HH
23
7.539
-13.840
31.007
-0.530
0.580
3.574
36.989
G
G
25
26
11.477
H
H
3
2
3.502
7.222
0.129
0.753
GG_DC25DG26:DC2DG3_HH
24
4.251
-6.756
36.059
0.122
0.424
3.485
42.986
G
I
26
1
9.814
H
H
2
1
3.640
7.141
-0.120
-0.590
GI_DG26DG1:DC1DC2_HH
25
-5.755
7.908
42.041
-1.584
-0.465
3.099
30.948
I
I
1
2
7.609
H
J
1
26
3.182
4.049
-0.342
-0.374
II_DG1DA2:DT26DC1_JH
26
0.777
-1.460
30.678
-1.455
0.785
2.856
31.857
I
I
2
3
4.449
J
J
26
25
2.819
2.431
-0.629
-0.231
II_DA2DA3:DT25DT26_JJ
27
-4.828
8.836
31.407
-0.808
0.376
3.313
33.240
I
I
3
4
0.329
J
J
25
24
3.348
0.188
0.054
-0.561
II_DA3DG4:DC24DT25_JJ
28
5.273
-9.255
32.830
-1.013
0.810
3.106
40.300
I
I
4
5
-7.413
J
J
24
23
3.147
-5.091
0.491
-0.182
II_DG4DA5:DT23DC24_JJ
29
-2.838
4.132
39.894
0.288
-1.021
3.423
31.432
I
I
5
6
-5.472
J
J
23
22
3.341
-2.959
0.173
-1.174
II_DA5DT6:DA22DT23_JJ
30
-1.493
2.761
31.261
-1.593
-0.610
3.209
35.481
I
I
6
7
1.363
J
J
22
21
3.236
0.830
-0.072
-0.732
II_DT6DT7:DA21DA22_JJ
31
2.133
-3.503
35.409
-1.321
0.426
2.936
39.185
I
I
7
8
-4.447
J
J
21
20
2.927
-2.978
0.108
-0.209
II_DT7DT8:DA20DA21_JJ
32
2.289
-3.418
39.011
0.009
0.086
3.288
36.407
I
I
8
9
8.479
J
J
20
19
3.479
5.280
0.141
-1.099
II_DT8DC9:DG19DA20_JJ
33
-0.675
1.085
36.029
-2.522
-0.323
3.316
35.481
I
I
9
10
7.790
J
J
19
18
3.267
4.718
0.851
-0.076
II_DC9DC10:DG18DG19_JJ
34
5.104
-8.427
34.815
-0.828
-0.637
3.339
30.272
I
I
10
11
13.498
J
J
18
17
3.444
6.964
-0.504
-0.231
II_DC10DA11:DT17DG18_JJ
35
-4.436
8.599
29.149
-1.932
0.017
3.126
36.673
I
I
11
12
4.265
J
J
17
16
3.179
2.681
0.399
-0.421
II_DA11DA12:DT16DT17_JJ
36
-1.213
1.929
36.559
-1.024
-0.794
2.954
32.981
I
I
12
13
5.714
J
J
16
15
3.000
3.238
-0.553
-0.091
II_DA12DA13:DT15DT16_JJ
37
1.272
-2.244
32.802
-0.663
1.171
3.103
29.393
I
I
13
14
1.696
J
J
15
14
3.113
0.860
0.489
-1.087
II_DA13DC14:DG14DT15_JJ
38
1.659
-3.271
29.335
-2.318
-0.625
3.773
39.499
I
I
14
15
-9.874
J
J
14
13
3.708
-6.642
-0.101
-0.696
II_DC14DT15:DA13DG14_JJ
39
-1.742
2.590
38.921
-0.129
-0.087
3.316
39.691
I
I
15
16
-2.320
J
J
13
12
3.254
-1.568
0.528
-0.572
II_DT15DC16:DG12DA13_JJ
40
6.577
-9.731
39.133
-0.657
-0.001
3.135
30.756
I
I
16
17
8.918
J
J
12
11
3.200
4.712
-0.124
-0.210
II_DC16DT17:DA11DG12_JJ
41
-0.803
1.519
30.392
-1.295
0.081
3.545
42.626
I
I
17
18
4.125
J
J
11
10
3.540
2.997
0.628
0.198
II_DT17DG18:DC10DA11_JJ
42
-0.024
0.033
42.526
-0.054
-0.866
3.092
24.936
I
I
18
19
-8.331
J
J
10
9
2.967
-3.580
-1.096
-0.483
II_DG18DT19:DA9DC10_JJ
43
-2.293
5.335
24.577
-0.119
1.898
3.399
34.960
I
I
19
20
-2.678
J
J
9
8
3.435
-1.600
0.177
0.302
II_DT19DG20:DC8DA9_JJ
44
6.056
-10.132
34.412
0.758
0.669
3.201
33.720
I
I
20
21
7.688
J
J
8
7
3.344
4.432
0.189
-0.435
II_DG20DG21:DC7DC8_JJ
45
-4.892
8.486
33.085
-1.478
-1.129
3.062
30.769
I
I
21
22
5.333
J
J
7
6
3.269
2.825
1.182
-1.624
II_DG21DT22:DA6DC7_JJ
46
-1.214
2.292
30.619
-3.597
-2.459
2.894
39.250
I
I
22
23
18.854
J
J
6
5
3.358
12.379
0.514
-1.108
II_DT22DT23:DA5DA6_JJ
47
7.928
-12.075
36.494
-3.116
0.174
2.858
34.665
I
I
23
24
3.849
J
J
5
4
2.841
2.292
-1.150
0.693
II_DT23DG24:DC4DA5_JJ
48
0.680
-1.142
34.585
0.856
2.022
3.002
35.265
I
I
24
25
7.940
J
J
4
3
3.126
4.797
0.830
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II_DG24DC25:DG3DC4_JJ
49
-0.064
0.106
34.948
-1.868
-1.379
3.116
34.020
I
I
25
26
3.183
J
J
3
2
3.112
1.860
0.069
0.201
II_DC25DG26:DC2DG3_JJ
50
2.116
-3.621
33.906
0.060
0.204
exptl_crystal_grow
pdbx_database_proc
pdbx_database_status
pdbx_seq_map_depositor_info
struct_biol
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
repository
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Data collection
Database references
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Refinement description
1
0
2001-03-09
1
1
2011-05-08
1
2
2011-07-13
1
3
2019-05-08
1
4
2023-12-13
_exptl_crystal_grow.method
_exptl_crystal_grow.temp
_pdbx_database_status.recvd_author_approval
_pdbx_seq_map_depositor_info.one_letter_code_mod
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
IMMUNOGLOBULIN MOTIF DEOXYRIBONUCLEIC ACID- RECOGNITION AND HETERODIMERIZATION FOR THE PEBP2/CBF RUNT-DOMAIN
FOLD OF THE CBFA
AML1/CBFBETA COMPLEX
MOLECULAR INSIGHTS INTO PEBP2/CBF-SMMHC ASSOCIATED ACUTE LEUKEMIA REVEALED FROM THE THREE-DIMENSIONAL STRUCTURE OF PEBP2/CBF BETA
CORE BINDING FACTOR BETA
CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER
CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN-CBFBETA CORE DOMAIN DIMERIC AND C/EBPBETA BZIP DIMERIC BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER
PDBE
Y
PDBE
2001-01-11
REL
REL
9606
HUMAN
HOMO SAPIENS
sample
9606
HUMAN
HOMO SAPIENS
sample
C/EBP BETA IS IMPORTANT TRANSCRIPTIONAL ACTIVATOR IN THE REGULATION
OF GENES INVOLVED IN IMMUNE AND INFLAMMATORY RESPONSES. SPECIFICALL
THE CORE BINDING FACTOR ALPHA SUBUNIT BINDS DNA AND APPEARS TO HAVE
A ROLE IN THE DEVELOPMENT OF NORMAL HEMATOPOIESIS.
1IO4
PDB
experimental model
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ARG
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ASN
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ASN
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A
LEU
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LEU
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A
PHE
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PHE
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LYS
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LYS
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GLN
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ARG
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ASN
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ASN
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LEU
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PHE
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LYS
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GLY
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GLY
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C
GLU
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GLU
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PHE
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PHE
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LEU
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LEU
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ASN
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ASN
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MET
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ALA
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GLY
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ASN
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ASP
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ASP
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GLU
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ASN
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TYR
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SER
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ALA
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LEU
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LEU
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ARG
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ASN
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ALA
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ALA
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THR
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THR
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ALA
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ALA
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ALA
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ALA
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MET
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LYS
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LYS
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ASN
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VAL
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ALA
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ARG
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PHE
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ASN
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PHE
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PHE
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ASN
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VAL
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THR
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TYR
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GLU
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GLU
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ARG
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ARG
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ARG
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ARG
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HIS
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LYS
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ILE
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ARG
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ARG
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ARG
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GLU
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ILE
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VAL
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ARG
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ARG
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LYS
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LYS
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SER
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ARG
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ARG
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ASP
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LYS
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ALA
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ALA
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LYS
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LYS
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MET
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ARG
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ARG
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ASN
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LEU
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GLU
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THR
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GLN
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GLN
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HIS
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HIS
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LYS
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VAL
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LEU
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GLU
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GLU
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LEU
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ALA
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GLU
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GLU
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ASN
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ASN
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GLU
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GLU
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ARG
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ARG
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LEU
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LEU
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GLN
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GLN
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LYS
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LYS
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LYS
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LYS
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VAL
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VAL
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GLU
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GLU
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GLN
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GLN
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LEU
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ARG
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ARG
322
D
GLU
323
n
65
GLU
323
D
LEU
324
n
66
LEU
324
D
SER
325
n
67
SER
325
D
THR
326
n
68
THR
326
D
LEU
327
n
69
LEU
327
D
ARG
328
n
70
ARG
328
D
ASN
329
n
71
ASN
329
D
LEU
330
n
72
LEU
330
D
PHE
331
n
73
PHE
331
D
LYS
332
n
74
LYS
332
D
GLN
333
n
75
GLN
333
D
LEU
334
n
76
LEU
334
D
PRO
335
n
77
PRO
335
D
n
78
336
D
n
79
337
D
n
80
338
D
n
81
339
D
n
82
340
D
n
83
341
D
n
84
342
D
n
85
343
D
n
86
344
D
n
87
345
D
n
1
259
E
n
2
260
E
n
3
261
E
n
4
262
E
n
5
263
E
n
6
264
E
n
7
265
E
n
8
266
E
n
9
267
E
ASP
268
n
10
ASP
268
E
LYS
269
n
11
LYS
269
E
HIS
270
n
12
HIS
270
E
SER
271
n
13
SER
271
E
ASP
272
n
14
ASP
272
E
GLU
273
n
15
GLU
273
E
TYR
274
n
16
TYR
274
E
LYS
275
n
17
LYS
275
E
ILE
276
n
18
ILE
276
E
ARG
277
n
19
ARG
277
E
ARG
278
n
20
ARG
278
E
GLU
279
n
21
GLU
279
E
ARG
280
n
22
ARG
280
E
ASN
281
n
23
ASN
281
E
ASN
282
n
24
ASN
282
E
ILE
283
n
25
ILE
283
E
ALA
284
n
26
ALA
284
E
VAL
285
n
27
VAL
285
E
ARG
286
n
28
ARG
286
E
LYS
287
n
29
LYS
287
E
SER
288
n
30
SER
288
E
ARG
289
n
31
ARG
289
E
ASP
290
n
32
ASP
290
E
LYS
291
n
33
LYS
291
E
ALA
292
n
34
ALA
292
E
LYS
293
n
35
LYS
293
E
MET
294
n
36
MET
294
E
ARG
295
n
37
ARG
295
E
ASN
296
n
38
ASN
296
E
LEU
297
n
39
LEU
297
E
GLU
298
n
40
GLU
298
E
THR
299
n
41
THR
299
E
GLN
300
n
42
GLN
300
E
HIS
301
n
43
HIS
301
E
LYS
302
n
44
LYS
302
E
VAL
303
n
45
VAL
303
E
LEU
304
n
46
LEU
304
E
GLU
305
n
47
GLU
305
E
LEU
306
n
48
LEU
306
E
THR
307
n
49
THR
307
E
ALA
308
n
50
ALA
308
E
GLU
309
n
51
GLU
309
E
ASN
310
n
52
ASN
310
E
GLU
311
n
53
GLU
311
E
ARG
312
n
54
ARG
312
E
LEU
313
n
55
LEU
313
E
GLN
314
n
56
GLN
314
E
LYS
315
n
57
LYS
315
E
LYS
316
n
58
LYS
316
E
VAL
317
n
59
VAL
317
E
GLU
318
n
60
GLU
318
E
GLN
319
n
61
GLN
319
E
LEU
320
n
62
LEU
320
E
SER
321
n
63
SER
321
E
ARG
322
n
64
ARG
322
E
GLU
323
n
65
GLU
323
E
LEU
324
n
66
LEU
324
E
SER
325
n
67
SER
325
E
THR
326
n
68
THR
326
E
LEU
327
n
69
LEU
327
E
ARG
328
n
70
ARG
328
E
ASN
329
n
71
ASN
329
E
LEU
330
n
72
LEU
330
E
PHE
331
n
73
PHE
331
E
LYS
332
n
74
LYS
332
E
GLN
333
n
75
GLN
333
E
LEU
334
n
76
LEU
334
E
PRO
335
n
77
PRO
335
E
n
78
336
E
n
79
337
E
n
80
338
E
n
81
339
E
n
82
340
E
n
83
341
E
n
84
342
E
n
85
343
E
n
86
344
E
n
87
345
E
GLY
60
n
1
GLY
60
F
GLU
61
n
2
GLU
61
F
LEU
62
n
3
LEU
62
F
VAL
63
n
4
VAL
63
F
ARG
64
n
5
ARG
64
F
THR
65
n
6
THR
65
F
ASP
66
n
7
ASP
66
F
SER
67
n
8
SER
67
F
PRO
68
n
9
PRO
68
F
ASN
69
n
10
ASN
69
F
PHE
70
n
11
PHE
70
F
LEU
71
n
12
LEU
71
F
CYS
72
n
13
CYS
72
F
SER
73
n
14
SER
73
F
VAL
74
n
15
VAL
74
F
LEU
75
n
16
LEU
75
F
PRO
76
n
17
PRO
76
F
THR
77
n
18
THR
77
F
HIS
78
n
19
HIS
78
F
TRP
79
n
20
TRP
79
F
ARG
80
n
21
ARG
80
F
CYS
81
n
22
CYS
81
F
ASN
82
n
23
ASN
82
F
LYS
83
n
24
LYS
83
F
THR
84
n
25
THR
84
F
LEU
85
n
26
LEU
85
F
PRO
86
n
27
PRO
86
F
ILE
87
n
28
ILE
87
F
ALA
88
n
29
ALA
88
F
PHE
89
n
30
PHE
89
F
LYS
90
n
31
LYS
90
F
VAL
91
n
32
VAL
91
F
VAL
92
n
33
VAL
92
F
ALA
93
n
34
ALA
93
F
LEU
94
n
35
LEU
94
F
GLY
95
n
36
GLY
95
F
ASP
96
n
37
ASP
96
F
VAL
97
n
38
VAL
97
F
PRO
98
n
39
PRO
98
F
ASP
99
n
40
ASP
99
F
GLY
100
n
41
GLY
100
F
THR
101
n
42
THR
101
F
LEU
102
n
43
LEU
102
F
VAL
103
n
44
VAL
103
F
THR
104
n
45
THR
104
F
VAL
105
n
46
VAL
105
F
MET
106
n
47
MET
106
F
ALA
107
n
48
ALA
107
F
GLY
108
n
49
GLY
108
F
ASN
109
n
50
ASN
109
F
ASP
110
n
51
ASP
110
F
GLU
111
n
52
GLU
111
F
ASN
112
n
53
ASN
112
F
TYR
113
n
54
TYR
113
F
SER
114
n
55
SER
114
F
ALA
115
n
56
ALA
115
F
GLU
116
n
57
GLU
116
F
LEU
117
n
58
LEU
117
F
ARG
118
n
59
ARG
118
F
ASN
119
n
60
ASN
119
F
ALA
120
n
61
ALA
120
F
THR
121
n
62
THR
121
F
ALA
122
n
63
ALA
122
F
ALA
123
n
64
ALA
123
F
MET
124
n
65
MET
124
F
LYS
125
n
66
LYS
125
F
ASN
126
n
67
ASN
126
F
GLN
127
n
68
GLN
127
F
VAL
128
n
69
VAL
128
F
ALA
129
n
70
ALA
129
F
ARG
130
n
71
ARG
130
F
PHE
131
n
72
PHE
131
F
ASN
132
n
73
ASN
132
F
ASP
133
n
74
ASP
133
F
LEU
134
n
75
LEU
134
F
ARG
135
n
76
ARG
135
F
PHE
136
n
77
PHE
136
F
VAL
137
n
78
VAL
137
F
GLY
138
n
79
GLY
138
F
ARG
139
n
80
ARG
139
F
SER
140
n
81
SER
140
F
GLY
141
n
82
GLY
141
F
ARG
142
n
83
ARG
142
F
GLY
143
n
84
GLY
143
F
LYS
144
n
85
LYS
144
F
SER
145
n
86
SER
145
F
PHE
146
n
87
PHE
146
F
THR
147
n
88
THR
147
F
LEU
148
n
89
LEU
148
F
THR
149
n
90
THR
149
F
ILE
150
n
91
ILE
150
F
THR
151
n
92
THR
151
F
VAL
152
n
93
VAL
152
F
PHE
153
n
94
PHE
153
F
THR
154
n
95
THR
154
F
ASN
155
n
96
ASN
155
F
PRO
156
n
97
PRO
156
F
PRO
157
n
98
PRO
157
F
GLN
158
n
99
GLN
158
F
VAL
159
n
100
VAL
159
F
ALA
160
n
101
ALA
160
F
THR
161
n
102
THR
161
F
TYR
162
n
103
TYR
162
F
HIS
163
n
104
HIS
163
F
ARG
164
n
105
ARG
164
F
ALA
165
n
106
ALA
165
F
ILE
166
n
107
ILE
166
F
LYS
167
n
108
LYS
167
F
ILE
168
n
109
ILE
168
F
THR
169
n
110
THR
169
F
VAL
170
n
111
VAL
170
F
ASP
171
n
112
ASP
171
F
GLY
172
n
113
GLY
172
F
PRO
173
n
114
PRO
173
F
ARG
174
n
115
ARG
174
F
GLU
175
n
116
GLU
175
F
PRO
176
n
117
PRO
176
F
ARG
177
n
118
ARG
177
F
ARG
178
n
119
ARG
178
F
HIS
179
n
120
HIS
179
F
n
121
180
F
n
122
181
F
n
123
182
F
DG
1
n
1
DG
1
G
DA
2
n
2
DA
2
G
DA
3
n
3
DA
3
G
DG
4
n
4
DG
4
G
DA
5
n
5
DA
5
G
DT
6
n
6
DT
6
G
DT
7
n
7
DT
7
G
DT
8
n
8
DT
8
G
DC
9
n
9
DC
9
G
DC
10
n
10
DC
10
G
DA
11
n
11
DA
11
G
DA
12
n
12
DA
12
G
DA
13
n
13
DA
13
G
DC
14
n
14
DC
14
G
DT
15
n
15
DT
15
G
DC
16
n
16
DC
16
G
DT
17
n
17
DT
17
G
DG
18
n
18
DG
18
G
DT
19
n
19
DT
19
G
DG
20
n
20
DG
20
G
DG
21
n
21
DG
21
G
DT
22
n
22
DT
22
G
DT
23
n
23
DT
23
G
DG
24
n
24
DG
24
G
DC
25
n
25
DC
25
G
DG
26
n
26
DG
26
G
DC
1
n
1
DC
1
H
DC
2
n
2
DC
2
H
DG
3
n
3
DG
3
H
DC
4
n
4
DC
4
H
DA
5
n
5
DA
5
H
DA
6
n
6
DA
6
H
DC
7
n
7
DC
7
H
DC
8
n
8
DC
8
H
DA
9
n
9
DA
9
H
DC
10
n
10
DC
10
H
DA
11
n
11
DA
11
H
DG
12
n
12
DG
12
H
DA
13
n
13
DA
13
H
DG
14
n
14
DG
14
H
DT
15
n
15
DT
15
H
DT
16
n
16
DT
16
H
DT
17
n
17
DT
17
H
DG
18
n
18
DG
18
H
DG
19
n
19
DG
19
H
DA
20
n
20
DA
20
H
DA
21
n
21
DA
21
H
DA
22
n
22
DA
22
H
DT
23
n
23
DT
23
H
DC
24
n
24
DC
24
H
DT
25
n
25
DT
25
H
DT
26
n
26
DT
26
H
DG
1
n
1
DG
1
I
DA
2
n
2
DA
2
I
DA
3
n
3
DA
3
I
DG
4
n
4
DG
4
I
DA
5
n
5
DA
5
I
DT
6
n
6
DT
6
I
DT
7
n
7
DT
7
I
DT
8
n
8
DT
8
I
DC
9
n
9
DC
9
I
DC
10
n
10
DC
10
I
DA
11
n
11
DA
11
I
DA
12
n
12
DA
12
I
DA
13
n
13
DA
13
I
DC
14
n
14
DC
14
I
DT
15
n
15
DT
15
I
DC
16
n
16
DC
16
I
DT
17
n
17
DT
17
I
DG
18
n
18
DG
18
I
DT
19
n
19
DT
19
I
DG
20
n
20
DG
20
I
DG
21
n
21
DG
21
I
DT
22
n
22
DT
22
I
DT
23
n
23
DT
23
I
DG
24
n
24
DG
24
I
DC
25
n
25
DC
25
I
DG
26
n
26
DG
26
I
DC
1
n
1
DC
1
J
DC
2
n
2
DC
2
J
DG
3
n
3
DG
3
J
DC
4
n
4
DC
4
J
DA
5
n
5
DA
5
J
DA
6
n
6
DA
6
J
DC
7
n
7
DC
7
J
DC
8
n
8
DC
8
J
DA
9
n
9
DA
9
J
DC
10
n
10
DC
10
J
DA
11
n
11
DA
11
J
DG
12
n
12
DG
12
J
DA
13
n
13
DA
13
J
DG
14
n
14
DG
14
J
DT
15
n
15
DT
15
J
DT
16
n
16
DT
16
J
DT
17
n
17
DT
17
J
DG
18
n
18
DG
18
J
DG
19
n
19
DG
19
J
DA
20
n
20
DA
20
J
DA
21
n
21
DA
21
J
DA
22
n
22
DA
22
J
DT
23
n
23
DT
23
J
DC
24
n
24
DC
24
J
DT
25
n
25
DT
25
J
DT
26
n
26
DT
26
J
author_and_software_defined_assembly
PQS
5
pentameric
author_and_software_defined_assembly
PQS
5
pentameric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
C
N
VAL
63
C
N
VAL
4
C
O
CYS
72
C
O
CYS
13
C
N
SER
73
C
N
SER
14
C
O
LYS
90
C
O
LYS
31
C
N
VAL
91
C
N
VAL
32
C
O
ALA
129
C
O
ALA
70
C
N
TRP
79
C
N
TRP
20
C
O
LYS
167
C
O
LYS
108
C
N
ALA
165
C
N
ALA
106
C
O
PHE
146
C
O
PHE
87
C
N
THR
151
C
N
THR
92
C
O
THR
104
C
O
THR
45
C
N
VAL
103
C
N
VAL
44
C
O
ALA
122
C
O
ALA
63
C
N
ARG
118
C
N
ARG
59
C
O
ARG
135
C
O
ARG
76
F
N
VAL
63
F
N
VAL
4
F
O
CYS
72
F
O
CYS
13
F
N
SER
73
F
N
SER
14
F
O
LYS
90
F
O
LYS
31
F
N
VAL
91
F
N
VAL
32
F
O
ALA
129
F
O
ALA
70
F
N
TRP
79
F
N
TRP
20
F
O
LYS
167
F
O
LYS
108
F
N
ALA
122
F
N
ALA
63
F
O
VAL
103
F
O
VAL
44
F
N
GLY
108
F
N
GLY
49
F
O
THR
147
F
O
THR
88
F
N
VAL
152
F
N
VAL
93
F
O
GLN
158
F
O
GLN
99
F
N
ARG
118
F
N
ARG
59
F
O
ARG
135
F
O
ARG
76
1
A
CG
GLN
333
A
CG
GLN
75
1
Y
1
A
CD
GLN
333
A
CD
GLN
75
1
Y
1
A
OE1
GLN
333
A
OE1
GLN
75
1
Y
1
A
NE2
GLN
333
A
NE2
GLN
75
1
Y
1
B
CG
GLU
273
B
CG
GLU
15
1
Y
1
B
CD
GLU
273
B
CD
GLU
15
1
Y
1
B
OE1
GLU
273
B
OE1
GLU
15
1
Y
1
B
OE2
GLU
273
B
OE2
GLU
15
1
Y
1
E
CG
GLU
273
E
CG
GLU
15
1
Y
1
E
CD
GLU
273
E
CD
GLU
15
1
Y
1
E
OE1
GLU
273
E
OE1
GLU
15
1
Y
1
E
OE2
GLU
273
E
OE2
GLU
15
1
Y
1
A
VAL
259
A
VAL
1
1
Y
1
A
LYS
260
A
LYS
2
1
Y
1
A
SER
261
A
SER
3
1
Y
1
A
LYS
262
A
LYS
4
1
Y
1
A
ALA
263
A
ALA
5
1
Y
1
A
LYS
264
A
LYS
6
1
Y
1
A
LYS
265
A
LYS
7
1
Y
1
A
THR
266
A
THR
8
1
Y
1
A
VAL
267
A
VAL
9
1
Y
1
A
LEU
334
A
LEU
76
1
Y
1
A
PRO
335
A
PRO
77
1
Y
1
A
GLU
336
A
GLU
78
1
Y
1
A
PRO
337
A
PRO
79
1
Y
1
A
LEU
338
A
LEU
80
1
Y
1
A
LEU
339
A
LEU
81
1
Y
1
A
ALA
340
A
ALA
82
1
Y
1
A
SER
341
A
SER
83
1
Y
1
A
SER
342
A
SER
84
1
Y
1
A
GLY
343
A
GLY
85
1
Y
1
A
HIS
344
A
HIS
86
1
Y
1
A
CYS
345
A
CYS
87
1
Y
1
B
VAL
259
B
VAL
1
1
Y
1
B
LYS
260
B
LYS
2
1
Y
1
B
SER
261
B
SER
3
1
Y
1
B
LYS
262
B
LYS
4
1
Y
1
B
ALA
263
B
ALA
5
1
Y
1
B
LYS
264
B
LYS
6
1
Y
1
B
LYS
265
B
LYS
7
1
Y
1
B
THR
266
B
THR
8
1
Y
1
B
VAL
267
B
VAL
9
1
Y
1
B
PRO
335
B
PRO
77
1
Y
1
B
GLU
336
B
GLU
78
1
Y
1
B
PRO
337
B
PRO
79
1
Y
1
B
LEU
338
B
LEU
80
1
Y
1
B
LEU
339
B
LEU
81
1
Y
1
B
ALA
340
B
ALA
82
1
Y
1
B
SER
341
B
SER
83
1
Y
1
B
SER
342
B
SER
84
1
Y
1
B
GLY
343
B
GLY
85
1
Y
1
B
HIS
344
B
HIS
86
1
Y
1
B
CYS
345
B
CYS
87
1
Y
1
C
ARG
180
C
ARG
121
1
Y
1
C
GLN
181
C
GLN
122
1
Y
1
C
LYS
182
C
LYS
123
1
Y
1
D
VAL
259
D
VAL
1
1
Y
1
D
LYS
260
D
LYS
2
1
Y
1
D
SER
261
D
SER
3
1
Y
1
D
LYS
262
D
LYS
4
1
Y
1
D
ALA
263
D
ALA
5
1
Y
1
D
LYS
264
D
LYS
6
1
Y
1
D
LYS
265
D
LYS
7
1
Y
1
D
THR
266
D
THR
8
1
Y
1
D
VAL
267
D
VAL
9
1
Y
1
D
GLU
336
D
GLU
78
1
Y
1
D
PRO
337
D
PRO
79
1
Y
1
D
LEU
338
D
LEU
80
1
Y
1
D
LEU
339
D
LEU
81
1
Y
1
D
ALA
340
D
ALA
82
1
Y
1
D
SER
341
D
SER
83
1
Y
1
D
SER
342
D
SER
84
1
Y
1
D
GLY
343
D
GLY
85
1
Y
1
D
HIS
344
D
HIS
86
1
Y
1
D
CYS
345
D
CYS
87
1
Y
1
E
VAL
259
E
VAL
1
1
Y
1
E
LYS
260
E
LYS
2
1
Y
1
E
SER
261
E
SER
3
1
Y
1
E
LYS
262
E
LYS
4
1
Y
1
E
ALA
263
E
ALA
5
1
Y
1
E
LYS
264
E
LYS
6
1
Y
1
E
LYS
265
E
LYS
7
1
Y
1
E
THR
266
E
THR
8
1
Y
1
E
VAL
267
E
VAL
9
1
Y
1
E
GLU
336
E
GLU
78
1
Y
1
E
PRO
337
E
PRO
79
1
Y
1
E
LEU
338
E
LEU
80
1
Y
1
E
LEU
339
E
LEU
81
1
Y
1
E
ALA
340
E
ALA
82
1
Y
1
E
SER
341
E
SER
83
1
Y
1
E
SER
342
E
SER
84
1
Y
1
E
GLY
343
E
GLY
85
1
Y
1
E
HIS
344
E
HIS
86
1
Y
1
E
CYS
345
E
CYS
87
1
Y
1
F
ARG
180
F
ARG
121
1
Y
1
F
GLN
181
F
GLN
122
1
Y
1
F
LYS
182
F
LYS
123
1
Y
1
G
DG
18
0.054
SIDE CHAIN
1
J
DC
1
0.059
SIDE CHAIN
1
J
DC
2
0.059
SIDE CHAIN
1
J
DA
6
0.055
SIDE CHAIN
1
9.38
1.50
119.30
128.68
C
C
C
C
N
CA
VAL
PRO
PRO
97
98
98
Y
1
1.83
0.30
108.30
110.13
H
H
H
O4'
C1'
N1
DC
DC
DC
10
10
10
N
1
2.86
0.30
108.30
111.16
J
J
J
O4'
C1'
N1
DC
DC
DC
10
10
10
N
1
F
F
CB
CB
GLU
GLU
111
111
2.13
1_555
2_575
1
A
LYS
269
-63.68
8.07
1
A
HIS
270
-140.62
46.25
1
A
ASP
272
-2.37
-59.91
1
A
THR
299
-51.46
-72.47
1
A
VAL
303
-48.36
-72.41
1
A
THR
307
-36.88
-39.10
1
B
TYR
274
-28.25
-70.83
1
B
GLU
305
-29.70
-62.87
1
C
GLU
61
-27.86
140.91
1
C
ASN
109
-178.10
145.38
1
C
GLU
111
-51.64
-78.25
1
C
ASN
119
80.58
42.49
1
C
ALA
129
-119.83
77.34
1
C
ASP
133
34.37
66.67
1
D
ASN
282
-56.34
-70.85
1
D
LYS
287
-39.00
-71.25
1
D
SER
321
-53.00
-74.05
1
E
LYS
275
-42.88
-77.10
1
F
THR
65
-106.45
-165.88
1
F
ASN
82
30.43
26.22
1
F
SER
114
-158.37
85.36
1
F
ALA
120
-59.09
13.91
1
F
ASP
133
51.64
75.88
1
F
ARG
142
-36.53
131.34
1
F
ARG
164
34.02
64.44
PROTEIN_REP.PARAM
PROTEIN.TOP
DNA-RNA_REP.PARAM
DNA-RNA.TOP
72.9
23.49
0.00
0.00
-38.31
0.00
14.82
BULK SOLVENT MODEL USED, BSOL IS DETERMINED MANUALLY AND FIXED. ATOMS C, O, N, AND CA ARE HARMONICALLY RESTRAINED DURING REFINEMENT WITH HARMONIC RESTRAINT CONSTANT OF 20
0.313
0.009
0.244
0.244
3.00
30.0
1264
26157
4.8
89.6
RANDOM
173187.84
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
1IO4
FLAT MODEL
19
0.197986
0.60
0.44
20.00
0.63
0.49
3.00
30.0
0
6270
0
2120
4150
0.007
1.3
20.6
1.13
21.58
1.50
26.38
2.00
32.32
2.00
35.12
2.50
0.425
0.033
0.360
3.19
170
3154
6
5.1
69.4
46.0
3.000
30.000
1HJB
26407
0.000
0.06600
1
13.1000
4.456
91.3
3.00
3.05
1.400
0.30200
1
1.91
71.9
refinement
CNS
0.9
data reduction
HKL-2000
data scaling
HKL-2000
phasing
CNS
0.9
CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER
1
N
N
1
N
N
2
N
N
1
N
N
1
N
N
2
N
N
3
N
N
4
N
N
3
N
N
4
N
N
A
SER
271
A
SER
13
HELX_P
A
GLN
333
A
GLN
75
1
1
63
B
SER
271
B
SER
13
HELX_P
B
LEU
334
B
LEU
76
1
2
64
D
SER
271
D
SER
13
HELX_P
D
LEU
334
D
LEU
76
1
3
64
E
SER
271
E
SER
13
HELX_P
E
LEU
334
E
LEU
76
1
4
64
hydrog
WATSON-CRICK
G
DA
2
G
N1
DA
2
1_555
H
DT
26
H
N3
DT
26
1_555
hydrog
WATSON-CRICK
G
DA
2
G
N6
DA
2
1_555
H
DT
26
H
O4
DT
26
1_555
hydrog
WATSON-CRICK
G
DA
3
G
N1
DA
3
1_555
H
DT
25
H
N3
DT
25
1_555
hydrog
WATSON-CRICK
G
DA
3
G
N6
DA
3
1_555
H
DT
25
H
O4
DT
25
1_555
hydrog
WATSON-CRICK
G
DG
4
G
N1
DG
4
1_555
H
DC
24
H
N3
DC
24
1_555
hydrog
WATSON-CRICK
G
DG
4
G
N2
DG
4
1_555
H
DC
24
H
O2
DC
24
1_555
hydrog
WATSON-CRICK
G
DG
4
G
O6
DG
4
1_555
H
DC
24
H
N4
DC
24
1_555
hydrog
WATSON-CRICK
G
DA
5
G
N1
DA
5
1_555
H
DT
23
H
N3
DT
23
1_555
hydrog
WATSON-CRICK
G
DA
5
G
N6
DA
5
1_555
H
DT
23
H
O4
DT
23
1_555
hydrog
WATSON-CRICK
G
DT
6
G
N3
DT
6
1_555
H
DA
22
H
N1
DA
22
1_555
hydrog
WATSON-CRICK
G
DT
6
G
O4
DT
6
1_555
H
DA
22
H
N6
DA
22
1_555
hydrog
WATSON-CRICK
G
DT
7
G
N3
DT
7
1_555
H
DA
21
H
N1
DA
21
1_555
hydrog
WATSON-CRICK
G
DT
7
G
O4
DT
7
1_555
H
DA
21
H
N6
DA
21
1_555
hydrog
WATSON-CRICK
G
DT
8
G
N3
DT
8
1_555
H
DA
20
H
N1
DA
20
1_555
hydrog
WATSON-CRICK
G
DT
8
G
O4
DT
8
1_555
H
DA
20
H
N6
DA
20
1_555
hydrog
WATSON-CRICK
G
DC
9
G
N3
DC
9
1_555
H
DG
19
H
N1
DG
19
1_555
hydrog
WATSON-CRICK
G
DC
9
G
N4
DC
9
1_555
H
DG
19
H
O6
DG
19
1_555
hydrog
WATSON-CRICK
G
DC
9
G
O2
DC
9
1_555
H
DG
19
H
N2
DG
19
1_555
hydrog
WATSON-CRICK
G
DC
10
G
N3
DC
10
1_555
H
DG
18
H
N1
DG
18
1_555
hydrog
WATSON-CRICK
G
DC
10
G
N4
DC
10
1_555
H
DG
18
H
O6
DG
18
1_555
hydrog
WATSON-CRICK
G
DC
10
G
O2
DC
10
1_555
H
DG
18
H
N2
DG
18
1_555
hydrog
WATSON-CRICK
G
DA
11
G
N1
DA
11
1_555
H
DT
17
H
N3
DT
17
1_555
hydrog
WATSON-CRICK
G
DA
11
G
N6
DA
11
1_555
H
DT
17
H
O4
DT
17
1_555
hydrog
WATSON-CRICK
G
DA
12
G
N1
DA
12
1_555
H
DT
16
H
N3
DT
16
1_555
hydrog
WATSON-CRICK
G
DA
12
G
N6
DA
12
1_555
H
DT
16
H
O4
DT
16
1_555
hydrog
WATSON-CRICK
G
DA
13
G
N1
DA
13
1_555
H
DT
15
H
N3
DT
15
1_555
hydrog
WATSON-CRICK
G
DA
13
G
N6
DA
13
1_555
H
DT
15
H
O4
DT
15
1_555
hydrog
WATSON-CRICK
G
DC
14
G
N3
DC
14
1_555
H
DG
14
H
N1
DG
14
1_555
hydrog
WATSON-CRICK
G
DC
14
G
N4
DC
14
1_555
H
DG
14
H
O6
DG
14
1_555
hydrog
WATSON-CRICK
G
DC
14
G
O2
DC
14
1_555
H
DG
14
H
N2
DG
14
1_555
hydrog
WATSON-CRICK
G
DT
15
G
N3
DT
15
1_555
H
DA
13
H
N1
DA
13
1_555
hydrog
WATSON-CRICK
G
DT
15
G
O4
DT
15
1_555
H
DA
13
H
N6
DA
13
1_555
hydrog
DC-DG PAIR
G
DC
16
G
O2
DC
16
1_555
H
DG
12
H
N2
DG
12
1_555
hydrog
WATSON-CRICK
G
DT
17
G
N3
DT
17
1_555
H
DA
11
H
N1
DA
11
1_555
hydrog
WATSON-CRICK
G
DT
17
G
O4
DT
17
1_555
H
DA
11
H
N6
DA
11
1_555
hydrog
WATSON-CRICK
G
DG
18
G
N1
DG
18
1_555
H
DC
10
H
N3
DC
10
1_555
hydrog
WATSON-CRICK
G
DG
18
G
N2
DG
18
1_555
H
DC
10
H
O2
DC
10
1_555
hydrog
WATSON-CRICK
G
DG
18
G
O6
DG
18
1_555
H
DC
10
H
N4
DC
10
1_555
hydrog
WATSON-CRICK
G
DT
19
G
N3
DT
19
1_555
H
DA
9
H
N1
DA
9
1_555
hydrog
WATSON-CRICK
G
DT
19
G
O4
DT
19
1_555
H
DA
9
H
N6
DA
9
1_555
hydrog
WATSON-CRICK
G
DG
20
G
N1
DG
20
1_555
H
DC
8
H
N3
DC
8
1_555
hydrog
WATSON-CRICK
G
DG
20
G
N2
DG
20
1_555
H
DC
8
H
O2
DC
8
1_555
hydrog
WATSON-CRICK
G
DG
20
G
O6
DG
20
1_555
H
DC
8
H
N4
DC
8
1_555
hydrog
WATSON-CRICK
G
DG
21
G
N1
DG
21
1_555
H
DC
7
H
N3
DC
7
1_555
hydrog
WATSON-CRICK
G
DG
21
G
N2
DG
21
1_555
H
DC
7
H
O2
DC
7
1_555
hydrog
WATSON-CRICK
G
DG
21
G
O6
DG
21
1_555
H
DC
7
H
N4
DC
7
1_555
hydrog
WATSON-CRICK
G
DT
22
G
N3
DT
22
1_555
H
DA
6
H
N1
DA
6
1_555
hydrog
WATSON-CRICK
G
DT
22
G
O4
DT
22
1_555
H
DA
6
H
N6
DA
6
1_555
hydrog
WATSON-CRICK
G
DT
23
G
N3
DT
23
1_555
H
DA
5
H
N1
DA
5
1_555
hydrog
WATSON-CRICK
G
DT
23
G
O4
DT
23
1_555
H
DA
5
H
N6
DA
5
1_555
hydrog
WATSON-CRICK
G
DG
24
G
N1
DG
24
1_555
H
DC
4
H
N3
DC
4
1_555
hydrog
WATSON-CRICK
G
DG
24
G
N2
DG
24
1_555
H
DC
4
H
O2
DC
4
1_555
hydrog
WATSON-CRICK
G
DG
24
G
O6
DG
24
1_555
H
DC
4
H
N4
DC
4
1_555
hydrog
WATSON-CRICK
G
DC
25
G
N3
DC
25
1_555
H
DG
3
H
N1
DG
3
1_555
hydrog
WATSON-CRICK
G
DC
25
G
N4
DC
25
1_555
H
DG
3
H
O6
DG
3
1_555
hydrog
WATSON-CRICK
G
DC
25
G
O2
DC
25
1_555
H
DG
3
H
N2
DG
3
1_555
hydrog
WATSON-CRICK
G
DG
26
G
N1
DG
26
1_555
H
DC
2
H
N3
DC
2
1_555
hydrog
WATSON-CRICK
G
DG
26
G
N2
DG
26
1_555
H
DC
2
H
O2
DC
2
1_555
hydrog
WATSON-CRICK
G
DG
26
G
O6
DG
26
1_555
H
DC
2
H
N4
DC
2
1_555
hydrog
WATSON-CRICK
H
DC
1
H
N3
DC
1
1_555
I
DG
1
I
N1
DG
1
1_555
hydrog
WATSON-CRICK
H
DC
1
H
N4
DC
1
1_555
I
DG
1
I
O6
DG
1
1_555
hydrog
WATSON-CRICK
H
DC
1
H
O2
DC
1
1_555
I
DG
1
I
N2
DG
1
1_555
hydrog
WATSON-CRICK
I
DA
2
I
N1
DA
2
1_555
J
DT
26
J
N3
DT
26
1_555
hydrog
WATSON-CRICK
I
DA
2
I
N6
DA
2
1_555
J
DT
26
J
O4
DT
26
1_555
hydrog
WATSON-CRICK
I
DA
3
I
N1
DA
3
1_555
J
DT
25
J
N3
DT
25
1_555
hydrog
WATSON-CRICK
I
DA
3
I
N6
DA
3
1_555
J
DT
25
J
O4
DT
25
1_555
hydrog
WATSON-CRICK
I
DG
4
I
N1
DG
4
1_555
J
DC
24
J
N3
DC
24
1_555
hydrog
WATSON-CRICK
I
DG
4
I
N2
DG
4
1_555
J
DC
24
J
O2
DC
24
1_555
hydrog
WATSON-CRICK
I
DG
4
I
O6
DG
4
1_555
J
DC
24
J
N4
DC
24
1_555
hydrog
WATSON-CRICK
I
DA
5
I
N1
DA
5
1_555
J
DT
23
J
N3
DT
23
1_555
hydrog
WATSON-CRICK
I
DA
5
I
N6
DA
5
1_555
J
DT
23
J
O4
DT
23
1_555
hydrog
WATSON-CRICK
I
DT
6
I
N3
DT
6
1_555
J
DA
22
J
N1
DA
22
1_555
hydrog
WATSON-CRICK
I
DT
6
I
O4
DT
6
1_555
J
DA
22
J
N6
DA
22
1_555
hydrog
WATSON-CRICK
I
DT
7
I
N3
DT
7
1_555
J
DA
21
J
N1
DA
21
1_555
hydrog
WATSON-CRICK
I
DT
7
I
O4
DT
7
1_555
J
DA
21
J
N6
DA
21
1_555
hydrog
WATSON-CRICK
I
DT
8
I
N3
DT
8
1_555
J
DA
20
J
N1
DA
20
1_555
hydrog
WATSON-CRICK
I
DT
8
I
O4
DT
8
1_555
J
DA
20
J
N6
DA
20
1_555
hydrog
WATSON-CRICK
I
DC
9
I
N3
DC
9
1_555
J
DG
19
J
N1
DG
19
1_555
hydrog
WATSON-CRICK
I
DC
9
I
N4
DC
9
1_555
J
DG
19
J
O6
DG
19
1_555
hydrog
WATSON-CRICK
I
DC
9
I
O2
DC
9
1_555
J
DG
19
J
N2
DG
19
1_555
hydrog
WATSON-CRICK
I
DC
10
I
N3
DC
10
1_555
J
DG
18
J
N1
DG
18
1_555
hydrog
WATSON-CRICK
I
DC
10
I
N4
DC
10
1_555
J
DG
18
J
O6
DG
18
1_555
hydrog
WATSON-CRICK
I
DC
10
I
O2
DC
10
1_555
J
DG
18
J
N2
DG
18
1_555
hydrog
WATSON-CRICK
I
DA
11
I
N1
DA
11
1_555
J
DT
17
J
N3
DT
17
1_555
hydrog
WATSON-CRICK
I
DA
11
I
N6
DA
11
1_555
J
DT
17
J
O4
DT
17
1_555
hydrog
WATSON-CRICK
I
DA
12
I
N1
DA
12
1_555
J
DT
16
J
N3
DT
16
1_555
hydrog
WATSON-CRICK
I
DA
12
I
N6
DA
12
1_555
J
DT
16
J
O4
DT
16
1_555
hydrog
WATSON-CRICK
I
DA
13
I
N1
DA
13
1_555
J
DT
15
J
N3
DT
15
1_555
hydrog
WATSON-CRICK
I
DA
13
I
N6
DA
13
1_555
J
DT
15
J
O4
DT
15
1_555
hydrog
WATSON-CRICK
I
DC
14
I
N3
DC
14
1_555
J
DG
14
J
N1
DG
14
1_555
hydrog
WATSON-CRICK
I
DC
14
I
N4
DC
14
1_555
J
DG
14
J
O6
DG
14
1_555
hydrog
WATSON-CRICK
I
DC
14
I
O2
DC
14
1_555
J
DG
14
J
N2
DG
14
1_555
hydrog
WATSON-CRICK
I
DT
15
I
N3
DT
15
1_555
J
DA
13
J
N1
DA
13
1_555
hydrog
WATSON-CRICK
I
DT
15
I
O4
DT
15
1_555
J
DA
13
J
N6
DA
13
1_555
hydrog
WATSON-CRICK
I
DC
16
I
N3
DC
16
1_555
J
DG
12
J
N1
DG
12
1_555
hydrog
WATSON-CRICK
I
DC
16
I
N4
DC
16
1_555
J
DG
12
J
O6
DG
12
1_555
hydrog
WATSON-CRICK
I
DC
16
I
O2
DC
16
1_555
J
DG
12
J
N2
DG
12
1_555
hydrog
WATSON-CRICK
I
DT
17
I
N3
DT
17
1_555
J
DA
11
J
N1
DA
11
1_555
hydrog
WATSON-CRICK
I
DT
17
I
O4
DT
17
1_555
J
DA
11
J
N6
DA
11
1_555
hydrog
WATSON-CRICK
I
DG
18
I
N1
DG
18
1_555
J
DC
10
J
N3
DC
10
1_555
hydrog
WATSON-CRICK
I
DG
18
I
N2
DG
18
1_555
J
DC
10
J
O2
DC
10
1_555
hydrog
WATSON-CRICK
I
DG
18
I
O6
DG
18
1_555
J
DC
10
J
N4
DC
10
1_555
hydrog
WATSON-CRICK
I
DT
19
I
N3
DT
19
1_555
J
DA
9
J
N1
DA
9
1_555
hydrog
WATSON-CRICK
I
DT
19
I
O4
DT
19
1_555
J
DA
9
J
N6
DA
9
1_555
hydrog
WATSON-CRICK
I
DG
20
I
N1
DG
20
1_555
J
DC
8
J
N3
DC
8
1_555
hydrog
WATSON-CRICK
I
DG
20
I
N2
DG
20
1_555
J
DC
8
J
O2
DC
8
1_555
hydrog
WATSON-CRICK
I
DG
20
I
O6
DG
20
1_555
J
DC
8
J
N4
DC
8
1_555
hydrog
WATSON-CRICK
I
DG
21
I
N1
DG
21
1_555
J
DC
7
J
N3
DC
7
1_555
hydrog
WATSON-CRICK
I
DG
21
I
N2
DG
21
1_555
J
DC
7
J
O2
DC
7
1_555
hydrog
WATSON-CRICK
I
DG
21
I
O6
DG
21
1_555
J
DC
7
J
N4
DC
7
1_555
hydrog
WATSON-CRICK
I
DT
22
I
N3
DT
22
1_555
J
DA
6
J
N1
DA
6
1_555
hydrog
WATSON-CRICK
I
DT
22
I
O4
DT
22
1_555
J
DA
6
J
N6
DA
6
1_555
hydrog
WATSON-CRICK
I
DT
23
I
N3
DT
23
1_555
J
DA
5
J
N1
DA
5
1_555
hydrog
WATSON-CRICK
I
DT
23
I
O4
DT
23
1_555
J
DA
5
J
N6
DA
5
1_555
hydrog
WATSON-CRICK
I
DG
24
I
N1
DG
24
1_555
J
DC
4
J
N3
DC
4
1_555
hydrog
WATSON-CRICK
I
DG
24
I
N2
DG
24
1_555
J
DC
4
J
O2
DC
4
1_555
hydrog
WATSON-CRICK
I
DG
24
I
O6
DG
24
1_555
J
DC
4
J
N4
DC
4
1_555
hydrog
WATSON-CRICK
I
DC
25
I
N3
DC
25
1_555
J
DG
3
J
N1
DG
3
1_555
hydrog
WATSON-CRICK
I
DC
25
I
N4
DC
25
1_555
J
DG
3
J
O6
DG
3
1_555
hydrog
WATSON-CRICK
I
DC
25
I
O2
DC
25
1_555
J
DG
3
J
N2
DG
3
1_555
hydrog
WATSON-CRICK
I
DG
26
I
N1
DG
26
1_555
J
DC
2
J
N3
DC
2
1_555
hydrog
WATSON-CRICK
I
DG
26
I
N2
DG
26
1_555
J
DC
2
J
O2
DC
2
1_555
hydrog
WATSON-CRICK
I
DG
26
I
O6
DG
26
1_555
J
DC
2
J
N4
DC
2
1_555
TRANSCRIPTION/DNA
TRANSCRIPTION/DNA, PROTEIN-DNA COMPLEX, TRANSCRIPTION FACTOR, BZIP, RUNX, RUNT, C/EBP, CBF, CORE BINDING FACTOR, AML1, AML, TRANSCRIPTION-DNA complex
C
ASN
155
C
ASN
96
1
C
PRO
156
C
PRO
97
0.03
F
ASN
155
F
ASN
96
1
F
PRO
156
F
PRO
97
-0.12
CEBB_HUMAN
UNP
1
P17676
AML1_MOUSE
UNP
2
Q03347
1HJB
PDB
3
1HJB
1HJB
PDB
4
1HJB
259
345
1HJB
259
345
P17676
A
1
1
87
259
345
1HJB
259
345
P17676
B
1
1
87
60
182
1HJB
60
182
Q03347
C
2
1
123
259
345
1HJB
259
345
P17676
D
1
1
87
259
345
1HJB
259
345
P17676
E
1
1
87
60
182
1HJB
60
182
Q03347
F
2
1
123
1
26
1HJB
1
26
1HJB
G
3
1
26
1
26
1HJB
1
26
1HJB
H
4
1
26
1
26
1HJB
1
26
1HJB
I
3
1
26
1
26
1HJB
1
26
1HJB
J
4
1
26
4
5
2
4
2
4
2
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
C
LEU
62
C
LEU
3
C
ARG
64
C
ARG
5
C
PHE
70
C
PHE
11
C
SER
73
C
SER
14
C
LYS
90
C
LYS
31
C
ALA
93
C
ALA
34
C
VAL
128
C
VAL
69
C
ARG
130
C
ARG
71
C
HIS
78
C
HIS
19
C
ARG
80
C
ARG
21
C
GLN
158
C
GLN
99
C
THR
169
C
THR
110
C
PHE
146
C
PHE
87
C
VAL
152
C
VAL
93
C
LEU
102
C
LEU
43
C
GLY
108
C
GLY
49
C
THR
121
C
THR
62
C
ALA
123
C
ALA
64
C
LEU
117
C
LEU
58
C
ARG
118
C
ARG
59
C
ARG
135
C
ARG
76
C
PHE
136
C
PHE
77
F
LEU
62
F
LEU
3
F
ARG
64
F
ARG
5
F
PHE
70
F
PHE
11
F
SER
73
F
SER
14
F
PHE
89
F
PHE
30
F
ALA
93
F
ALA
34
F
VAL
128
F
VAL
69
F
PHE
131
F
PHE
72
F
HIS
78
F
HIS
19
F
ARG
80
F
ARG
21
F
LYS
167
F
LYS
108
F
THR
169
F
THR
110
F
THR
121
F
THR
62
F
ALA
123
F
ALA
64
F
LEU
102
F
LEU
43
F
GLY
108
F
GLY
49
F
THR
147
F
THR
88
F
VAL
152
F
VAL
93
F
GLN
158
F
GLN
99
F
TYR
162
F
TYR
103
F
LEU
117
F
LEU
58
F
ARG
118
F
ARG
59
F
ARG
135
F
ARG
76
F
PHE
136
F
PHE
77
18
P 21 21 2