1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Calzolai, L.
Zahn, R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
278
35592
10.1074/JBC.M303005200
12826672
Influence of Ph on NMR Structure and Stability of the Human Prion Protein Globular Domain
2003
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
12559.972
MAJOR PRION PROTEIN PRECURSOR
GLOBULAR DOMAIN, RESIDUES 125-228
1
man
polymer
PRP, PRP27-30, PRP33-35C, ASCR, CD230 ANTIGEN
no
no
LGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDEYSNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVK
MMERVVEQMCITQYERESQAYYQR
LGGYMLGSAMSRPIIHFGSDYEDRYYRENMHRYPNQVYYRPMDEYSNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVK
MMERVVEQMCITQYERESQAYYQR
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HUMAN
sample
9606
HOMO SAPIENS
562
ESCHERICHIA COLI
repository
Initial release
Version format compliance
Version format compliance
1
0
2003-07-03
1
1
2011-05-08
1
2
2011-07-13
HUMAN PRION PROTEIN VARIANT M166V
HUMAN PRION PROTEIN VARIANT M166V
HUMAN PRION PROTEIN VARIANT S170N
HUMAN PRION PROTEIN VARIANT S170N
HUMAN PRION PROTEIN VARIANT R220K
HUMAN PRION PROTEIN VARIANT R220K
HUMAN PRION PROTEIN AT PH 7.0
PDBE
Y
PDBE
2003-02-27
REL
LOWER TARGET FUNCTION
20
20
7.0
pH
293
K
torsion angle dynamics
R.KORADI,M.BILLETER,P.GUNTERT
refinement
OPALP
structure solution
DYANA
750
Bruker
DRX
LEU
125
n
1
LEU
125
A
GLY
126
n
2
GLY
126
A
GLY
127
n
3
GLY
127
A
TYR
128
n
4
TYR
128
A
MET
129
n
5
MET
129
A
LEU
130
n
6
LEU
130
A
GLY
131
n
7
GLY
131
A
SER
132
n
8
SER
132
A
ALA
133
n
9
ALA
133
A
MET
134
n
10
MET
134
A
SER
135
n
11
SER
135
A
ARG
136
n
12
ARG
136
A
PRO
137
n
13
PRO
137
A
ILE
138
n
14
ILE
138
A
ILE
139
n
15
ILE
139
A
HIS
140
n
16
HIS
140
A
PHE
141
n
17
PHE
141
A
GLY
142
n
18
GLY
142
A
SER
143
n
19
SER
143
A
ASP
144
n
20
ASP
144
A
TYR
145
n
21
TYR
145
A
GLU
146
n
22
GLU
146
A
ASP
147
n
23
ASP
147
A
ARG
148
n
24
ARG
148
A
TYR
149
n
25
TYR
149
A
TYR
150
n
26
TYR
150
A
ARG
151
n
27
ARG
151
A
GLU
152
n
28
GLU
152
A
ASN
153
n
29
ASN
153
A
MET
154
n
30
MET
154
A
HIS
155
n
31
HIS
155
A
ARG
156
n
32
ARG
156
A
TYR
157
n
33
TYR
157
A
PRO
158
n
34
PRO
158
A
ASN
159
n
35
ASN
159
A
GLN
160
n
36
GLN
160
A
VAL
161
n
37
VAL
161
A
TYR
162
n
38
TYR
162
A
TYR
163
n
39
TYR
163
A
ARG
164
n
40
ARG
164
A
PRO
165
n
41
PRO
165
A
MET
166
n
42
MET
166
A
ASP
167
n
43
ASP
167
A
GLU
168
n
44
GLU
168
A
TYR
169
n
45
TYR
169
A
SER
170
n
46
SER
170
A
ASN
171
n
47
ASN
171
A
GLN
172
n
48
GLN
172
A
ASN
173
n
49
ASN
173
A
ASN
174
n
50
ASN
174
A
PHE
175
n
51
PHE
175
A
VAL
176
n
52
VAL
176
A
HIS
177
n
53
HIS
177
A
ASP
178
n
54
ASP
178
A
CYS
179
n
55
CYS
179
A
VAL
180
n
56
VAL
180
A
ASN
181
n
57
ASN
181
A
ILE
182
n
58
ILE
182
A
THR
183
n
59
THR
183
A
ILE
184
n
60
ILE
184
A
LYS
185
n
61
LYS
185
A
GLN
186
n
62
GLN
186
A
HIS
187
n
63
HIS
187
A
THR
188
n
64
THR
188
A
VAL
189
n
65
VAL
189
A
THR
190
n
66
THR
190
A
THR
191
n
67
THR
191
A
THR
192
n
68
THR
192
A
THR
193
n
69
THR
193
A
LYS
194
n
70
LYS
194
A
GLY
195
n
71
GLY
195
A
GLU
196
n
72
GLU
196
A
ASN
197
n
73
ASN
197
A
PHE
198
n
74
PHE
198
A
THR
199
n
75
THR
199
A
GLU
200
n
76
GLU
200
A
THR
201
n
77
THR
201
A
ASP
202
n
78
ASP
202
A
VAL
203
n
79
VAL
203
A
LYS
204
n
80
LYS
204
A
MET
205
n
81
MET
205
A
MET
206
n
82
MET
206
A
GLU
207
n
83
GLU
207
A
ARG
208
n
84
ARG
208
A
VAL
209
n
85
VAL
209
A
VAL
210
n
86
VAL
210
A
GLU
211
n
87
GLU
211
A
GLN
212
n
88
GLN
212
A
MET
213
n
89
MET
213
A
CYS
214
n
90
CYS
214
A
ILE
215
n
91
ILE
215
A
THR
216
n
92
THR
216
A
GLN
217
n
93
GLN
217
A
TYR
218
n
94
TYR
218
A
GLU
219
n
95
GLU
219
A
ARG
220
n
96
ARG
220
A
GLU
221
n
97
GLU
221
A
SER
222
n
98
SER
222
A
GLN
223
n
99
GLN
223
A
ALA
224
n
100
ALA
224
A
TYR
225
n
101
TYR
225
A
TYR
226
n
102
TYR
226
A
GLN
227
n
103
GLN
227
A
ARG
228
n
104
ARG
228
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLY
131
A
N
GLY
7
A
O
VAL
161
A
O
VAL
37
2
A
A
HH
OD1
TYR
ASP
128
178
1.59
4
A
A
O
HG1
THR
THR
188
191
1.60
6
A
A
OE1
HG
GLU
SER
219
222
1.56
8
A
A
HH
OD1
TYR
ASP
128
178
1.55
9
A
A
HH
OD2
TYR
ASP
128
178
1.57
9
A
A
O
HG1
VAL
THR
189
192
1.59
10
A
A
HH
OD2
TYR
ASP
128
178
1.60
11
A
A
HH
OE2
TYR
GLU
163
221
1.58
12
A
A
HH
OD1
TYR
ASP
157
202
1.56
14
A
A
HH
OD1
TYR
ASP
128
178
1.57
15
A
A
HH
OD1
TYR
ASP
128
178
1.53
15
A
A
O
HG1
VAL
THR
189
192
1.60
17
A
A
HH
OD1
TYR
ASP
128
178
1.47
17
A
A
O
HG1
VAL
THR
189
192
1.56
1
A
TYR
169
0.120
SIDE CHAIN
1
A
PHE
198
0.079
SIDE CHAIN
1
A
ARG
228
0.099
SIDE CHAIN
2
A
ARG
136
0.090
SIDE CHAIN
2
A
TYR
150
0.103
SIDE CHAIN
3
A
ARG
136
0.103
SIDE CHAIN
4
A
ARG
148
0.137
SIDE CHAIN
4
A
TYR
150
0.085
SIDE CHAIN
5
A
TYR
128
0.085
SIDE CHAIN
5
A
TYR
150
0.082
SIDE CHAIN
5
A
ARG
208
0.102
SIDE CHAIN
5
A
ARG
220
0.123
SIDE CHAIN
5
A
ARG
228
0.114
SIDE CHAIN
6
A
ARG
136
0.078
SIDE CHAIN
6
A
ARG
151
0.079
SIDE CHAIN
7
A
ARG
148
0.162
SIDE CHAIN
7
A
TYR
150
0.068
SIDE CHAIN
7
A
ARG
151
0.132
SIDE CHAIN
7
A
ARG
208
0.102
SIDE CHAIN
8
A
ARG
148
0.120
SIDE CHAIN
8
A
TYR
150
0.125
SIDE CHAIN
8
A
ARG
228
0.121
SIDE CHAIN
9
A
TYR
149
0.070
SIDE CHAIN
9
A
TYR
150
0.081
SIDE CHAIN
9
A
ARG
151
0.079
SIDE CHAIN
11
A
TYR
150
0.117
SIDE CHAIN
11
A
ARG
151
0.111
SIDE CHAIN
12
A
ARG
148
0.098
SIDE CHAIN
12
A
TYR
162
0.072
SIDE CHAIN
12
A
TYR
169
0.098
SIDE CHAIN
12
A
TYR
218
0.089
SIDE CHAIN
12
A
ARG
228
0.083
SIDE CHAIN
14
A
ARG
148
0.170
SIDE CHAIN
14
A
TYR
150
0.094
SIDE CHAIN
14
A
TYR
169
0.084
SIDE CHAIN
14
A
TYR
225
0.070
SIDE CHAIN
14
A
TYR
226
0.085
SIDE CHAIN
15
A
ARG
136
0.083
SIDE CHAIN
15
A
ARG
148
0.111
SIDE CHAIN
15
A
TYR
150
0.110
SIDE CHAIN
15
A
TYR
169
0.073
SIDE CHAIN
16
A
TYR
162
0.126
SIDE CHAIN
17
A
ARG
148
0.114
SIDE CHAIN
17
A
TYR
162
0.068
SIDE CHAIN
18
A
ARG
148
0.091
SIDE CHAIN
18
A
TYR
150
0.119
SIDE CHAIN
18
A
TYR
162
0.073
SIDE CHAIN
19
A
TYR
150
0.130
SIDE CHAIN
19
A
ARG
151
0.097
SIDE CHAIN
20
A
ARG
148
0.102
SIDE CHAIN
20
A
TYR
150
0.168
SIDE CHAIN
20
A
TYR
169
0.083
SIDE CHAIN
20
A
ARG
228
0.092
SIDE CHAIN
5
3.24
0.50
120.30
123.54
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
148
148
148
N
10
-3.17
0.50
120.30
117.13
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
164
164
164
N
11
-4.10
0.60
121.00
116.90
A
A
A
CB
CG
CD2
TYR
TYR
TYR
163
163
163
N
12
7.50
1.10
114.20
121.70
A
A
A
CA
CB
SG
CYS
CYS
CYS
179
179
179
N
16
-3.36
0.50
120.30
116.94
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
136
136
136
N
19
-3.17
0.50
120.30
117.13
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
164
164
164
N
20
6.72
1.10
114.20
120.92
A
A
A
CA
CB
SG
CYS
CYS
CYS
179
179
179
N
1
A
MET
134
-163.44
-167.85
1
A
MET
166
-48.48
102.47
1
A
GLU
168
-162.74
-12.64
1
A
SER
170
-162.52
11.24
1
A
PHE
198
-65.01
-177.11
2
A
SER
132
-59.39
-169.19
2
A
PRO
165
-72.35
-168.99
2
A
MET
166
-68.25
44.19
2
A
GLU
168
-174.06
-16.93
2
A
GLN
172
-92.28
-65.26
2
A
ASN
181
-65.45
0.51
2
A
ILE
182
-105.95
-70.27
2
A
PHE
198
-68.04
-168.98
3
A
SER
132
-69.30
-177.14
3
A
MET
134
-160.01
50.68
3
A
SER
135
53.23
-150.60
3
A
PRO
165
-67.87
-170.23
3
A
GLU
168
-139.97
-99.07
3
A
SER
170
44.91
29.58
3
A
GLN
172
-80.67
-101.25
4
A
SER
132
-70.97
-163.07
4
A
MET
134
-155.90
37.90
4
A
SER
135
49.09
-160.69
4
A
TYR
145
-57.96
-72.39
4
A
HIS
155
-65.61
0.55
4
A
GLU
168
-159.70
-33.72
4
A
ASN
171
174.02
178.68
4
A
GLN
172
-70.61
-79.70
5
A
TYR
128
42.80
-176.57
5
A
SER
132
-54.53
171.83
5
A
MET
134
-169.13
94.14
5
A
SER
135
35.46
-140.08
5
A
TYR
145
-66.33
2.82
5
A
PRO
165
-65.65
-178.20
5
A
MET
166
-77.45
-147.81
5
A
GLU
168
-144.99
-127.61
5
A
ASN
171
-163.12
-144.37
5
A
GLU
221
-134.58
-39.92
6
A
MET
166
-62.58
90.60
6
A
GLU
168
-153.36
-59.85
6
A
SER
170
47.37
24.13
6
A
ASN
173
-88.12
-70.28
7
A
SER
132
-63.09
-173.27
7
A
GLU
168
-144.59
-37.98
7
A
PHE
198
-69.03
-169.48
8
A
MET
134
-168.48
59.20
8
A
SER
135
48.98
-146.66
8
A
MET
166
-67.42
90.31
8
A
GLU
168
-179.24
-70.00
8
A
SER
170
-171.85
96.11
8
A
ASN
171
-149.04
-148.95
8
A
GLN
172
-83.19
-98.37
9
A
MET
134
-165.03
33.63
9
A
SER
135
50.79
-149.26
9
A
GLU
168
-157.76
-65.44
9
A
SER
170
46.20
10.04
10
A
MET
134
-140.04
30.37
10
A
SER
135
47.99
-142.86
10
A
ASP
167
69.57
-4.25
10
A
GLU
168
-129.84
-62.46
10
A
ASN
171
-177.85
-171.99
10
A
GLN
172
-97.25
-99.60
11
A
SER
132
-132.20
-159.64
11
A
SER
135
-68.61
-160.34
11
A
PHE
141
-144.82
-4.91
11
A
TYR
145
-61.83
1.96
11
A
GLU
168
-147.93
-27.37
11
A
SER
170
-160.38
94.98
12
A
TYR
128
47.78
-178.32
12
A
MET
134
-152.04
55.40
12
A
SER
135
50.72
-155.12
12
A
MET
166
-65.05
2.76
12
A
ASP
167
-73.35
24.08
12
A
GLU
168
-154.00
-149.69
12
A
SER
170
57.60
9.33
12
A
VAL
176
-120.81
-54.70
13
A
ASP
167
-64.72
0.38
13
A
SER
170
64.62
-22.06
13
A
LYS
194
-64.96
0.00
13
A
PHE
198
-59.87
-172.53
14
A
TYR
145
-64.36
-75.79
14
A
GLU
152
-58.10
-8.49
14
A
GLU
168
-140.88
16.23
14
A
TYR
169
-160.85
-69.84
14
A
SER
170
35.09
72.57
14
A
ASN
171
-112.69
-160.00
14
A
GLN
172
-121.55
-73.32
14
A
THR
199
-115.01
-168.88
15
A
GLU
168
-153.31
-29.19
15
A
SER
170
-166.69
-6.08
15
A
GLN
172
-68.23
-95.46
16
A
SER
132
-62.84
-166.97
16
A
GLU
168
-157.29
-80.16
17
A
TYR
128
51.52
141.61
17
A
ARG
136
-39.94
114.32
17
A
TYR
145
-65.07
2.23
17
A
MET
166
-58.04
84.98
17
A
GLU
168
-156.11
-99.97
17
A
SER
170
62.84
-1.41
18
A
TYR
128
41.70
-160.11
18
A
SER
132
-72.18
-165.59
18
A
MET
134
-152.03
50.37
18
A
SER
135
48.24
-159.89
18
A
PRO
165
-65.66
-178.00
18
A
ASP
167
38.45
27.23
18
A
GLU
168
78.27
-15.49
18
A
ASN
171
47.10
-154.14
18
A
GLN
172
-121.32
-101.02
18
A
ASN
181
-59.88
-9.26
18
A
ILE
182
-103.78
-63.75
18
A
GLN
223
-69.18
4.06
19
A
MET
134
-168.17
73.43
19
A
SER
135
49.74
-139.04
19
A
TYR
163
-160.38
-157.61
19
A
MET
166
-67.83
24.16
19
A
GLU
168
-166.52
-27.15
19
A
ASN
171
63.73
174.18
19
A
ALA
224
-92.74
-67.91
20
A
MET
134
-167.41
41.58
20
A
SER
135
49.79
-149.20
20
A
PHE
141
-141.90
-13.03
20
A
MET
166
-59.87
90.77
20
A
ASP
167
-143.66
-2.91
20
A
TYR
169
56.24
-66.76
20
A
SER
170
50.24
13.53
20
A
GLN
172
-34.40
-83.25
MAJOR PRION PROTEIN PRECURSOR
HUMAN PRION PROTEIN AT PH 7.0
1
N
N
A
SER
143
A
SER
19
HELX_P
A
MET
154
A
MET
30
1
1
12
A
HIS
155
A
HIS
31
HELX_P
A
TYR
157
A
TYR
33
5
2
3
A
GLN
172
A
GLN
48
HELX_P
A
GLY
195
A
GLY
71
1
3
24
A
THR
199
A
THR
75
HELX_P
A
ARG
228
A
ARG
104
1
4
30
disulf
2.046
A
CYS
179
A
SG
CYS
55
1_555
A
CYS
214
A
SG
CYS
90
1_555
PRION PROTEIN
PRION PROTEIN, PRION, BRAIN, GLYCOPROTEIN, GPI-ANCHOR
PRIO_HUMAN
UNP
1
P04156
125
228
1HJN
125
228
P04156
A
1
1
104
2
anti-parallel
A
MET
129
A
MET
5
A
ALA
133
A
ALA
9
A
GLN
160
A
GLN
36
A
TYR
163
A
TYR
39
1
P 1