0.019280
0.000000
0.000000
0.000000
0.018007
0.000000
0.000000
0.000000
0.010409
0.00000
0.00000
0.00000
Giraldo, R.
Fernandez-Tornero, C.
Evans, P.R.
Diaz-Orejas, R.
Romero, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
51.866
55.533
96.073
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C7 H6 O2
122.121
BENZOIC ACID
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
Hg 2
200.590
MERCURY (II) ION
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
O4 P -3
94.971
PHOSPHATE ION
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
10
496
10.1038/NSB0703-496
12825085
A Conformational Switch between Transcriptional Repression and Replication Initiation in Repa Dimerization Domain
2003
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
278
18606
10.1074/JBC.M212024200
12637554
Structural Changes in Repa, a Plasmid Replication Initiator, Upon Binding to Origin DNA
2003
NE
Fems Microbiol.Rev.
FMREE4
2078
0168-6445
26
533
10.1016/S0168-6445(02)00145-6
12586394
Common Domains in the Initiators of DNA Replication in Bacteria, Archaea and Eukarya: Combined Structural, Functional and Phylogenetic Perspectives
2003
UK
Embo J.
EMJODG
0897
0261-4189
17
4511
10.1093/EMBOJ/17.15.4511
9687517
Protein Domains and Conformational Changes in the Activation of Repa, a DNA Replication Initiator
1998
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
223
415
10.1016/0022-2836(92)90661-3
1738155
Genetic and Functional Analysis of the Basic Replicon of Pps10, a Plasmid Specific for Pseudomonas Isolated from Pseudomonas Syringae, Patovar Savastanoi
1992
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
IMAGE PLATE
2000-07-15
MARRESEARCH
MAD
M
x-ray
1
1.0090
1.0
1.0120
1.0
X31
EMBL/DESY, HAMBURG
1.0090, 1.0120
SYNCHROTRON
EMBL/DESY, HAMBURG BEAMLINE X31
PPS10 PLASMID DNA REPLICATION INITIATOR, REPLICATION INACTIVE, DIMERIC SPECIES
15180.649
REPLICATION PROTEIN
N-TERMINAL DOMAIN DIMER, RESIDUES 2-133
2
man
polymer
200.590
MERCURY (II) ION
8
syn
non-polymer
122.121
BENZOIC ACID
2
syn
non-polymer
94.971
PHOSPHATE ION
1
syn
non-polymer
18.015
water
30
nat
water
REPA
no
no
MVDNKVTQSNKLIESSHTLTLNEKRLVLCAASLIDSRKPLPKDGYLTIRADTFAEVFGIDVKHAYAALDDAATKLFNRDI
RRYVKGKVVERMRWVFHVKYREGQGCVELGFSPTIIPHLTMLHKEFTSYQLK
MVDNKVTQSNKLIESSHTLTLNEKRLVLCAASLIDSRKPLPKDGYLTIRADTFAEVFGIDVKHAYAALDDAATKLFNRDI
RRYVKGKVVERMRWVFHVKYREGQGCVELGFSPTIIPHLTMLHKEFTSYQLK
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
PSEUDOMONAS SYRINGAE PV. SAVASTANOI
sample
29438
PSEUDOMONAS SAVASTANOI
562
ESCHERICHIA COLI
SG22097
PRG-RECA-NHIS
1
2.26
45.17
VAPOR DIFFUSION, HANGING DROP
6.20
VAPOUR DIFFUSION (HANGING DROPS), WELLS: 500 MICROLITRES (14% PEG4000, 6% MPD), DROPS: 5 MICROLITRES PROTEIN (5 MG/ML IN 50 MM K2HPO4/ KH2PO4, PH= 6.2),5 MICROLITRES WELL SOL. PLUS 1 MICROLITRE OF P-CL-MERCURIBENZOATE (=1 MM IN WATER), THIN LARGE CRYSTAL PRISMS APPEAR AT 295 DEGREES KELVIN IN 1 MONTH., pH 6.20
295
exptl_crystal_grow
pdbx_database_proc
pdbx_database_status
struct_biol
entity_src_gen
diffrn_source
repository
Initial release
Version format compliance
Version format compliance
Data collection
Experimental preparation
Other
Data collection
Source and taxonomy
Data collection
1
0
2003-05-29
1
1
2011-05-08
1
2
2011-07-13
1
3
2019-02-27
1
4
2019-04-10
1
5
2019-07-24
_exptl_crystal_grow.method
_exptl_crystal_grow.temp
_pdbx_database_status.recvd_author_approval
_entity_src_gen.pdbx_host_org_cell_line
_entity_src_gen.pdbx_host_org_variant
_diffrn_source.pdbx_synchrotron_site
HELIX
DETERMINATION METHOD: AUTHOR PROVIDED.
SHEET
DETERMINATION METHOD: AUTHOR PROVIDED.
PDBE
Y
PDBE
2003-03-11
REL
HG
MERCURY (II) ION
BEZ
BENZOIC ACID
PO4
PHOSPHATE ION
HOH
water
CLONED REPA STARTS WITH A SINGLE MET RESIDUE
HG
1133
2
HG
HG
1133
A
BEZ
1134
3
BEZ
BEZ
1134
A
HG
1135
2
HG
HG
1135
A
HG
1136
2
HG
HG
1136
A
HG
1137
2
HG
HG
1137
A
PO4
1138
4
PO4
PO4
1138
A
HG
1133
2
HG
HG
1133
B
BEZ
1134
3
BEZ
BEZ
1134
B
HG
1135
2
HG
HG
1135
B
HG
1136
2
HG
HG
1136
B
HG
1137
2
HG
HG
1137
B
HOH
2001
5
HOH
HOH
2001
A
HOH
2002
5
HOH
HOH
2002
A
HOH
2003
5
HOH
HOH
2003
A
HOH
2004
5
HOH
HOH
2004
A
HOH
2005
5
HOH
HOH
2005
A
HOH
2006
5
HOH
HOH
2006
A
HOH
2007
5
HOH
HOH
2007
A
HOH
2008
5
HOH
HOH
2008
A
HOH
2009
5
HOH
HOH
2009
A
HOH
2010
5
HOH
HOH
2010
A
HOH
2011
5
HOH
HOH
2011
A
HOH
2012
5
HOH
HOH
2012
A
HOH
2013
5
HOH
HOH
2013
A
HOH
2014
5
HOH
HOH
2014
A
HOH
2015
5
HOH
HOH
2015
A
HOH
2016
5
HOH
HOH
2016
A
HOH
2017
5
HOH
HOH
2017
A
HOH
2018
5
HOH
HOH
2018
A
HOH
2019
5
HOH
HOH
2019
A
HOH
2020
5
HOH
HOH
2020
A
HOH
2001
5
HOH
HOH
2001
B
HOH
2002
5
HOH
HOH
2002
B
HOH
2003
5
HOH
HOH
2003
B
HOH
2004
5
HOH
HOH
2004
B
HOH
2005
5
HOH
HOH
2005
B
HOH
2006
5
HOH
HOH
2006
B
HOH
2007
5
HOH
HOH
2007
B
HOH
2008
5
HOH
HOH
2008
B
HOH
2009
5
HOH
HOH
2009
B
HOH
2010
5
HOH
HOH
2010
B
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
n
7
7
A
GLN
8
n
8
GLN
8
A
SER
9
n
9
SER
9
A
ASN
10
n
10
ASN
10
A
LYS
11
n
11
LYS
11
A
LEU
12
n
12
LEU
12
A
ILE
13
n
13
ILE
13
A
GLU
14
n
14
GLU
14
A
SER
15
n
15
SER
15
A
SER
16
n
16
SER
16
A
HIS
17
n
17
HIS
17
A
THR
18
n
18
THR
18
A
LEU
19
n
19
LEU
19
A
THR
20
n
20
THR
20
A
LEU
21
n
21
LEU
21
A
ASN
22
n
22
ASN
22
A
GLU
23
n
23
GLU
23
A
LYS
24
n
24
LYS
24
A
ARG
25
n
25
ARG
25
A
LEU
26
n
26
LEU
26
A
VAL
27
n
27
VAL
27
A
LEU
28
n
28
LEU
28
A
CYS
29
n
29
CYS
29
A
ALA
30
n
30
ALA
30
A
ALA
31
n
31
ALA
31
A
SER
32
n
32
SER
32
A
LEU
33
n
33
LEU
33
A
ILE
34
n
34
ILE
34
A
ASP
35
n
35
ASP
35
A
SER
36
n
36
SER
36
A
ARG
37
n
37
ARG
37
A
LYS
38
n
38
LYS
38
A
PRO
39
n
39
PRO
39
A
LEU
40
n
40
LEU
40
A
PRO
41
n
41
PRO
41
A
LYS
42
n
42
LYS
42
A
ASP
43
n
43
ASP
43
A
GLY
44
n
44
GLY
44
A
TYR
45
n
45
TYR
45
A
LEU
46
n
46
LEU
46
A
THR
47
n
47
THR
47
A
ILE
48
n
48
ILE
48
A
ARG
49
n
49
ARG
49
A
ALA
50
n
50
ALA
50
A
ASP
51
n
51
ASP
51
A
THR
52
n
52
THR
52
A
PHE
53
n
53
PHE
53
A
ALA
54
n
54
ALA
54
A
GLU
55
n
55
GLU
55
A
VAL
56
n
56
VAL
56
A
PHE
57
n
57
PHE
57
A
GLY
58
n
58
GLY
58
A
ILE
59
n
59
ILE
59
A
ASP
60
n
60
ASP
60
A
VAL
61
n
61
VAL
61
A
LYS
62
n
62
LYS
62
A
HIS
63
n
63
HIS
63
A
ALA
64
n
64
ALA
64
A
TYR
65
n
65
TYR
65
A
ALA
66
n
66
ALA
66
A
ALA
67
n
67
ALA
67
A
LEU
68
n
68
LEU
68
A
ASP
69
n
69
ASP
69
A
ASP
70
n
70
ASP
70
A
ALA
71
n
71
ALA
71
A
ALA
72
n
72
ALA
72
A
THR
73
n
73
THR
73
A
LYS
74
n
74
LYS
74
A
LEU
75
n
75
LEU
75
A
PHE
76
n
76
PHE
76
A
ASN
77
n
77
ASN
77
A
ARG
78
n
78
ARG
78
A
ASP
79
n
79
ASP
79
A
ILE
80
n
80
ILE
80
A
ARG
81
n
81
ARG
81
A
ARG
82
n
82
ARG
82
A
TYR
83
n
83
TYR
83
A
VAL
84
n
84
VAL
84
A
LYS
85
n
85
LYS
85
A
GLY
86
n
86
GLY
86
A
LYS
87
n
87
LYS
87
A
VAL
88
n
88
VAL
88
A
VAL
89
n
89
VAL
89
A
GLU
90
n
90
GLU
90
A
ARG
91
n
91
ARG
91
A
MET
92
n
92
MET
92
A
ARG
93
n
93
ARG
93
A
TRP
94
n
94
TRP
94
A
VAL
95
n
95
VAL
95
A
PHE
96
n
96
PHE
96
A
HIS
97
n
97
HIS
97
A
VAL
98
n
98
VAL
98
A
LYS
99
n
99
LYS
99
A
TYR
100
n
100
TYR
100
A
ARG
101
n
101
ARG
101
A
GLU
102
n
102
GLU
102
A
GLY
103
n
103
GLY
103
A
GLN
104
n
104
GLN
104
A
GLY
105
n
105
GLY
105
A
CYS
106
n
106
CYS
106
A
VAL
107
n
107
VAL
107
A
GLU
108
n
108
GLU
108
A
LEU
109
n
109
LEU
109
A
GLY
110
n
110
GLY
110
A
PHE
111
n
111
PHE
111
A
SER
112
n
112
SER
112
A
PRO
113
n
113
PRO
113
A
THR
114
n
114
THR
114
A
ILE
115
n
115
ILE
115
A
ILE
116
n
116
ILE
116
A
PRO
117
n
117
PRO
117
A
HIS
118
n
118
HIS
118
A
LEU
119
n
119
LEU
119
A
THR
120
n
120
THR
120
A
MET
121
n
121
MET
121
A
LEU
122
n
122
LEU
122
A
HIS
123
n
123
HIS
123
A
LYS
124
n
124
LYS
124
A
GLU
125
n
125
GLU
125
A
PHE
126
n
126
PHE
126
A
THR
127
n
127
THR
127
A
SER
128
n
128
SER
128
A
TYR
129
n
129
TYR
129
A
GLN
130
n
130
GLN
130
A
LEU
131
n
131
LEU
131
A
LYS
132
n
132
LYS
132
A
n
1
1
B
n
2
2
B
n
3
3
B
n
4
4
B
n
5
5
B
n
6
6
B
n
7
7
B
GLN
8
n
8
GLN
8
B
SER
9
n
9
SER
9
B
ASN
10
n
10
ASN
10
B
LYS
11
n
11
LYS
11
B
LEU
12
n
12
LEU
12
B
ILE
13
n
13
ILE
13
B
GLU
14
n
14
GLU
14
B
SER
15
n
15
SER
15
B
SER
16
n
16
SER
16
B
HIS
17
n
17
HIS
17
B
THR
18
n
18
THR
18
B
LEU
19
n
19
LEU
19
B
THR
20
n
20
THR
20
B
LEU
21
n
21
LEU
21
B
ASN
22
n
22
ASN
22
B
GLU
23
n
23
GLU
23
B
LYS
24
n
24
LYS
24
B
ARG
25
n
25
ARG
25
B
LEU
26
n
26
LEU
26
B
VAL
27
n
27
VAL
27
B
LEU
28
n
28
LEU
28
B
CYS
29
n
29
CYS
29
B
ALA
30
n
30
ALA
30
B
ALA
31
n
31
ALA
31
B
SER
32
n
32
SER
32
B
LEU
33
n
33
LEU
33
B
ILE
34
n
34
ILE
34
B
ASP
35
n
35
ASP
35
B
SER
36
n
36
SER
36
B
ARG
37
n
37
ARG
37
B
LYS
38
n
38
LYS
38
B
PRO
39
n
39
PRO
39
B
LEU
40
n
40
LEU
40
B
PRO
41
n
41
PRO
41
B
LYS
42
n
42
LYS
42
B
ASP
43
n
43
ASP
43
B
GLY
44
n
44
GLY
44
B
TYR
45
n
45
TYR
45
B
LEU
46
n
46
LEU
46
B
THR
47
n
47
THR
47
B
ILE
48
n
48
ILE
48
B
ARG
49
n
49
ARG
49
B
ALA
50
n
50
ALA
50
B
ASP
51
n
51
ASP
51
B
THR
52
n
52
THR
52
B
PHE
53
n
53
PHE
53
B
ALA
54
n
54
ALA
54
B
GLU
55
n
55
GLU
55
B
VAL
56
n
56
VAL
56
B
PHE
57
n
57
PHE
57
B
GLY
58
n
58
GLY
58
B
ILE
59
n
59
ILE
59
B
ASP
60
n
60
ASP
60
B
VAL
61
n
61
VAL
61
B
LYS
62
n
62
LYS
62
B
HIS
63
n
63
HIS
63
B
ALA
64
n
64
ALA
64
B
TYR
65
n
65
TYR
65
B
ALA
66
n
66
ALA
66
B
ALA
67
n
67
ALA
67
B
LEU
68
n
68
LEU
68
B
ASP
69
n
69
ASP
69
B
ASP
70
n
70
ASP
70
B
ALA
71
n
71
ALA
71
B
ALA
72
n
72
ALA
72
B
THR
73
n
73
THR
73
B
LYS
74
n
74
LYS
74
B
LEU
75
n
75
LEU
75
B
PHE
76
n
76
PHE
76
B
ASN
77
n
77
ASN
77
B
ARG
78
n
78
ARG
78
B
ASP
79
n
79
ASP
79
B
ILE
80
n
80
ILE
80
B
ARG
81
n
81
ARG
81
B
ARG
82
n
82
ARG
82
B
TYR
83
n
83
TYR
83
B
VAL
84
n
84
VAL
84
B
LYS
85
n
85
LYS
85
B
GLY
86
n
86
GLY
86
B
LYS
87
n
87
LYS
87
B
VAL
88
n
88
VAL
88
B
VAL
89
n
89
VAL
89
B
GLU
90
n
90
GLU
90
B
ARG
91
n
91
ARG
91
B
MET
92
n
92
MET
92
B
ARG
93
n
93
ARG
93
B
TRP
94
n
94
TRP
94
B
VAL
95
n
95
VAL
95
B
PHE
96
n
96
PHE
96
B
HIS
97
n
97
HIS
97
B
VAL
98
n
98
VAL
98
B
LYS
99
n
99
LYS
99
B
TYR
100
n
100
TYR
100
B
ARG
101
n
101
ARG
101
B
GLU
102
n
102
GLU
102
B
GLY
103
n
103
GLY
103
B
GLN
104
n
104
GLN
104
B
GLY
105
n
105
GLY
105
B
CYS
106
n
106
CYS
106
B
VAL
107
n
107
VAL
107
B
GLU
108
n
108
GLU
108
B
LEU
109
n
109
LEU
109
B
GLY
110
n
110
GLY
110
B
PHE
111
n
111
PHE
111
B
SER
112
n
112
SER
112
B
PRO
113
n
113
PRO
113
B
THR
114
n
114
THR
114
B
ILE
115
n
115
ILE
115
B
ILE
116
n
116
ILE
116
B
PRO
117
n
117
PRO
117
B
HIS
118
n
118
HIS
118
B
LEU
119
n
119
LEU
119
B
THR
120
n
120
THR
120
B
MET
121
n
121
MET
121
B
LEU
122
n
122
LEU
122
B
HIS
123
n
123
HIS
123
B
LYS
124
n
124
LYS
124
B
GLU
125
n
125
GLU
125
B
PHE
126
n
126
PHE
126
B
THR
127
n
127
THR
127
B
SER
128
n
128
SER
128
B
TYR
129
n
129
TYR
129
B
GLN
130
n
130
GLN
130
B
LEU
131
n
131
LEU
131
B
LYS
132
n
132
LYS
132
B
author_and_software_defined_assembly
PQS
2
dimeric
A
CYS
106
A
SG
CYS
106
1_555
A
HG
1133
C
HG
HG
1_555
A
GLN
104
A
OE1
GLN
104
1_555
90.1
A
CYS
106
A
SG
CYS
106
1_555
A
HG
1133
C
HG
HG
1_555
A
BEZ
1134
D
C4
BEZ
1_555
172.5
A
GLN
104
A
OE1
GLN
104
1_555
A
HG
1133
C
HG
HG
1_555
A
BEZ
1134
D
C4
BEZ
1_555
93.9
A
HIS
118
A
NE2
HIS
118
1_555
A
HG
1136
F
HG
HG
1_555
A
THR
114
A
O
THR
114
1_555
98.6
A
HIS
118
A
NE2
HIS
118
1_555
A
HG
1136
F
HG
HG
1_555
A
HOH
2020
N
O
HOH
1_555
76.5
A
THR
114
A
O
THR
114
1_555
A
HG
1136
F
HG
HG
1_555
A
HOH
2020
N
O
HOH
1_555
148.9
B
HOH
2010
O
O
HOH
2_564
A
HG
1137
G
HG
HG
1_555
A
HIS
123
A
NE2
HIS
123
1_555
133.0
B
CYS
106
B
SG
CYS
106
1_555
B
HG
1133
I
HG
HG
1_555
B
GLN
104
B
OE1
GLN
104
1_555
88.5
B
CYS
106
B
SG
CYS
106
1_555
B
HG
1133
I
HG
HG
1_555
B
GLN
104
B
O
GLN
104
1_555
77.0
B
GLN
104
B
OE1
GLN
104
1_555
B
HG
1133
I
HG
HG
1_555
B
GLN
104
B
O
GLN
104
1_555
96.7
B
CYS
29
B
SG
CYS
29
1_555
B
HG
1135
K
HG
HG
1_555
B
SER
32
B
OG
SER
32
1_555
129.5
B
CYS
29
B
SG
CYS
29
1_555
B
HG
1135
K
HG
HG
1_555
B
CYS
29
B
O
CYS
29
1_555
84.7
B
SER
32
B
OG
SER
32
1_555
B
HG
1135
K
HG
HG
1_555
B
CYS
29
B
O
CYS
29
1_555
44.9
B
HIS
118
B
NE2
HIS
118
1_555
B
HG
1136
L
HG
HG
1_555
B
THR
114
B
O
THR
114
1_555
88.9
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
48
A
N
ILE
48
A
O
VAL
107
A
O
VAL
107
A
O
GLY
110
A
O
GLY
110
A
N
PHE
96
A
N
PHE
96
A
N
TYR
100
A
N
TYR
100
B
O
VAL
89
B
O
VAL
89
B
N
MET
92
B
N
MET
92
B
O
ILE
80
B
O
ILE
80
B
N
ILE
48
B
N
ILE
48
B
O
VAL
107
B
O
VAL
107
B
O
GLY
110
B
O
GLY
110
B
N
PHE
96
B
N
PHE
96
B
N
TYR
100
B
N
TYR
100
A
O
VAL
89
A
O
VAL
89
A
N
MET
92
A
N
MET
92
A
O
ILE
80
A
O
ILE
80
1
A
MET
1
A
MET
1
1
Y
1
A
VAL
2
A
VAL
2
1
Y
1
A
ASP
3
A
ASP
3
1
Y
1
A
ASN
4
A
ASN
4
1
Y
1
A
LYS
5
A
LYS
5
1
Y
1
A
VAL
6
A
VAL
6
1
Y
1
A
THR
7
A
THR
7
1
Y
1
B
MET
1
B
MET
1
1
Y
1
B
VAL
2
B
VAL
2
1
Y
1
B
ASP
3
B
ASP
3
1
Y
1
B
ASN
4
B
ASN
4
1
Y
1
B
LYS
5
B
LYS
5
1
Y
1
B
VAL
6
B
VAL
6
1
Y
1
B
THR
7
B
THR
7
1
Y
1
A
ARG
81
0.104
SIDE CHAIN
1
A
LYS
85
70.94
-127.18
1
B
SER
9
-71.36
27.45
1
B
LEU
33
-60.01
49.38
1
B
PRO
39
-70.25
-153.90
1
B
PRO
41
-47.50
-171.07
1
B
ASP
43
83.22
-79.41
1
B
ASP
60
-59.82
90.90
1
B
VAL
61
-40.53
-16.77
1
B
ARG
101
-109.24
63.90
1
B
PRO
117
-64.67
25.29
1
B
HIS
118
-150.06
-8.23
1
B
LEU
119
-58.94
-9.35
1
B
THR
120
-94.27
-67.40
1
B
LYS
124
-57.31
-88.40
PROTEIN_REP.PARAM
PROTEIN.TOP
ION.PARAM
ION.TOP
WATER_REP.PARAM
WATER.TOP
BENZ_NO.PARAM
BENZ_NO.TOP
48.1
5.08
0.00
0.00
6.99
0.00
-12.08
THE ELECTRON DENSITY FOR RESIDUES SER B36 - LYS B42 IN CHAIN B IS DISCONTINUOUS, INTERPRETED TO BE PARTIALLY DISORDERED. THUS IT HAS BEEN MODELLED BASED ON STEREOCHEMICAL RESTRAINTS.
0.272
0.010
0.238
0.238
2.75
27.89
806
7421
10.9
96.6
RANDOM
1025607.14
1
RESTRAINED
THROUGHOUT
0.0
MAD
FLAT
27.2205
0.305183
0.47
0.38
5.00
0.51
0.40
2.75
27.89
30
2087
31
0
2026
0.008
1.4
22.6
0.89
0.378
0.034
0.342
2.92
125
1110
6
10.1
97.7
45.9
2.750
48.200
1HKQ
8343
2.100
0.08100
1
8.0000
5.200
97.7
0.32000
2.75
2.90
2.100
1
5.30
97.8
data reduction
MOSFLM
data scaling
SCALA
phasing
CNS
phasing
SHARP
refinement
CNS
1.1
REPLICATION PROTEIN
PPS10 plasmid DNA replication initiator protein RepA. Replication inactive, dimeric N-terminal domain.
1
N
N
1
N
N
2
N
N
3
N
N
2
N
N
2
N
N
2
N
N
4
N
N
2
N
N
3
N
N
2
N
N
2
N
N
2
N
N
5
N
N
5
N
N
A
ASN
10
A
ASN
10
HELX_P
A
LEU
19
A
LEU
19
1
1
10
A
GLU
23
A
GLU
23
HELX_P
A
LEU
33
A
LEU
33
1
2
11
A
ALA
50
A
ALA
50
HELX_P
A
PHE
57
A
PHE
57
1
3
8
A
HIS
63
A
HIS
63
HELX_P
A
ARG
78
A
ARG
78
1
4
16
A
PRO
113
A
PRO
113
HELX_P
A
GLN
130
A
GLN
130
1
5
18
B
ASN
10
B
ASN
10
HELX_P
B
LEU
19
B
LEU
19
1
6
10
B
GLU
23
B
GLU
23
HELX_P
B
LEU
33
B
LEU
33
1
7
11
B
ALA
50
B
ALA
50
HELX_P
B
PHE
57
B
PHE
57
1
8
8
B
HIS
63
B
HIS
63
HELX_P
B
ARG
78
B
ARG
78
1
9
16
B
PRO
113
B
PRO
113
HELX_P
B
GLN
130
B
GLN
130
1
10
18
metalc
2.428
A
HG
1133
C
HG
HG
1_555
A
CYS
106
A
SG
CYS
106
1_555
metalc
3.198
A
HG
1133
C
HG
HG
1_555
A
GLN
104
A
OE1
GLN
104
1_555
metalc
1.987
A
HG
1133
C
HG
HG
1_555
A
BEZ
1134
D
C4
BEZ
1_555
metalc
2.386
A
HG
1135
E
HG
HG
1_555
A
CYS
29
A
SG
CYS
29
1_555
metalc
2.571
A
HG
1136
F
HG
HG
1_555
A
HIS
118
A
NE2
HIS
118
1_555
metalc
3.226
A
HG
1136
F
HG
HG
1_555
A
THR
114
A
O
THR
114
1_555
metalc
3.379
A
HG
1136
F
HG
HG
1_555
A
HOH
2020
N
O
HOH
1_555
metalc
3.316
A
HG
1137
G
HG
HG
1_555
B
HOH
2010
O
O
HOH
2_564
metalc
2.174
A
HG
1137
G
HG
HG
1_555
A
HIS
123
A
NE2
HIS
123
1_555
metalc
2.521
B
HG
1133
I
HG
HG
1_555
B
CYS
106
B
SG
CYS
106
1_555
metalc
3.033
B
HG
1133
I
HG
HG
1_555
B
GLN
104
B
OE1
GLN
104
1_555
metalc
3.395
B
HG
1133
I
HG
HG
1_555
B
GLN
104
B
O
GLN
104
1_555
metalc
2.460
B
HG
1135
K
HG
HG
1_555
B
CYS
29
B
SG
CYS
29
1_555
metalc
3.187
B
HG
1135
K
HG
HG
1_555
B
SER
32
B
OG
SER
32
1_555
metalc
3.287
B
HG
1135
K
HG
HG
1_555
B
CYS
29
B
O
CYS
29
1_555
metalc
2.123
B
HG
1136
L
HG
HG
1_555
B
HIS
118
B
NE2
HIS
118
1_555
metalc
3.088
B
HG
1136
L
HG
HG
1_555
B
THR
114
B
O
THR
114
1_555
metalc
2.068
B
HG
1137
M
HG
HG
1_555
B
HIS
123
B
NE2
HIS
123
1_555
DNA BINDING PROTEIN
DNA BINDING PROTEIN, WINGED-HELIX, PPS10 PLASMID, REPLICATION INITIATOR DIMER.
given
-0.051640
0.998220
0.029890
0.997450
0.050080
0.050890
0.049300
0.032450
-0.998260
-15.37287
11.53942
70.66085
Q52546
UNP
1
Q52546
2
133
1HKQ
1
132
Q52546
A
1
1
132
2
133
1HKQ
1
132
Q52546
B
1
1
132
5
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLY
44
A
GLY
44
A
ARG
49
A
ARG
49
A
GLY
105
A
GLY
105
A
PHE
111
A
PHE
111
A
PHE
96
A
PHE
96
A
GLU
102
A
GLU
102
B
LYS
87
B
LYS
87
B
ARG
93
B
ARG
93
B
ILE
80
B
ILE
80
B
VAL
84
B
VAL
84
B
GLY
44
B
GLY
44
B
ARG
49
B
ARG
49
B
GLY
105
B
GLY
105
B
PHE
111
B
PHE
111
B
PHE
96
B
PHE
96
B
GLU
102
B
GLU
102
A
LYS
87
A
LYS
87
A
ARG
93
A
ARG
93
A
ILE
80
A
ILE
80
A
VAL
84
A
VAL
84
BINDING SITE FOR RESIDUE HG A1133
Software
3
BINDING SITE FOR RESIDUE HG A1135
Software
2
BINDING SITE FOR RESIDUE HG A1136
Software
2
BINDING SITE FOR RESIDUE HG A1137
Software
2
BINDING SITE FOR RESIDUE PO4 A1138
Software
3
BINDING SITE FOR RESIDUE HG B1133
Software
3
BINDING SITE FOR RESIDUE HG B1135
Software
2
BINDING SITE FOR RESIDUE HG B1136
Software
2
BINDING SITE FOR RESIDUE HG B1137
Software
1
BINDING SITE FOR RESIDUE BEZ A1134
Software
5
BINDING SITE FOR RESIDUE BEZ B1134
Software
4
A
GLN
104
A
GLN
104
3
1_555
A
CYS
106
A
CYS
106
3
1_555
A
BEZ
1134
D
BEZ
3
1_555
A
CYS
29
A
CYS
29
2
1_555
A
SER
32
A
SER
32
2
1_555
A
THR
114
A
THR
114
2
1_555
A
HIS
118
A
HIS
118
2
1_555
A
SER
32
A
SER
32
2
1_555
A
HIS
123
A
HIS
123
2
1_555
A
LYS
62
A
LYS
62
3
1_555
A
HIS
63
A
HIS
63
3
1_555
A
LYS
85
A
LYS
85
3
1_555
B
GLN
104
B
GLN
104
3
1_555
B
CYS
106
B
CYS
106
3
1_555
B
BEZ
1134
J
BEZ
3
1_555
B
CYS
29
B
CYS
29
2
1_555
B
SER
32
B
SER
32
2
1_555
B
THR
114
B
THR
114
2
1_555
B
HIS
118
B
HIS
118
2
1_555
B
HIS
123
B
HIS
123
1
1_555
A
ARG
49
A
ARG
49
5
1_555
A
GLN
104
A
GLN
104
5
1_555
A
HG
1133
C
HG
5
1_555
B
HIS
123
B
HIS
123
5
1_555
B
LYS
124
B
LYS
124
5
1_555
A
HIS
123
A
HIS
123
4
1_555
A
LYS
124
A
LYS
124
4
1_555
B
GLN
104
B
GLN
104
4
1_555
B
HG
1133
I
HG
4
1_555
19
P 21 21 21