0.011791 0.006807 0.000000 0.000000 0.013615 0.000000 0.000000 0.000000 0.006261 0.00000 0.00000 0.00000 Nardini, M. Spano, S. Cericola, C. Pesce, A. Massaro, A. Millo, E. Luini, A. Corda, D. Bolognesi, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 84.811 84.811 159.719 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C21 H27 N7 O14 P2 663.425 NICOTINAMIDE-ADENINE-DINUCLEOTIDE non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 S P N 251 N O N 252 N O N 253 N O N 254 N C N 255 R C N 256 N O N 257 S C N 258 N O N 259 R C N 260 N O N 261 R C Y 262 N N Y 263 N C Y 264 N N Y 265 N C Y 266 N C N 267 N N Y 268 N N Y 269 N C Y 270 N N Y 271 N C N 272 N O N 273 N P N 274 N O N 275 N O N 276 N O N 277 N C N 278 R C N 279 N O N 280 S C N 281 N O N 282 R C N 283 N O N 284 R C Y 285 N N Y 286 N C Y 287 N C N 288 N C N 289 N O N 290 N N Y 291 N C Y 292 N C Y 293 N C N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N C Y 330 N C Y 331 N C N 332 N O N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N N N 345 S C N 346 N C N 347 N O N 348 N C N 349 N C N 350 N C N 351 N O N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N N N 362 S C N 363 N C N 364 N O N 365 N C N 366 N O N 367 N O N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N N N 376 S C N 377 N C N 378 N O N 379 R C N 380 N O N 381 N C N 382 N O N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N N N 393 S C N 394 N C N 395 N O N 396 N C Y 397 N C Y 398 N C Y 399 N C Y 400 N N Y 401 N C Y 402 N C Y 403 N C Y 404 N C Y 405 N C N 406 N O N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N N N 420 S C N 421 N C N 422 N O N 423 N C Y 424 N C Y 425 N C Y 426 N C Y 427 N C Y 428 N C Y 429 N C N 430 N O N 431 N O N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N N N 444 S C N 445 N C N 446 N O N 447 N C N 448 N C N 449 N C N 450 N O N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N doub N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing Y 260 N sing Y 261 N sing Y 262 N doub N 263 N sing Y 264 N sing Y 265 N sing Y 266 N doub N 267 N sing Y 268 N doub N 269 N sing N 270 N sing Y 271 N sing Y 272 N doub N 273 N sing Y 274 N sing N 275 N sing N 276 N doub N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing Y 297 N sing Y 298 N doub Y 299 N doub N 300 N sing N 301 N sing Y 302 N sing N 303 N doub N 304 N sing N 305 N sing N 306 N sing Y 307 N doub N 308 N sing Y 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N doub N 319 N sing N 320 N sing N 321 N sing N 322 N sing Y 323 N doub Y 324 N sing Y 325 N sing N 326 N sing Y 327 N doub N 328 N sing Y 329 N doub N 330 N sing Y 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N doub N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N doub N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N doub N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N doub N 388 N sing N 389 N sing N 390 N sing N 391 N sing Y 392 N doub Y 393 N sing Y 394 N sing N 395 N sing Y 396 N doub Y 397 N sing Y 398 N sing N 399 N sing Y 400 N sing Y 401 N doub N 402 N sing Y 403 N doub N 404 N sing Y 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N doub N 416 N sing N 417 N sing N 418 N sing N 419 N sing Y 420 N doub Y 421 N sing Y 422 N sing N 423 N sing Y 424 N doub N 425 N sing Y 426 N doub N 427 N sing Y 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N doub N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing UK Embo J. EMJODG 0897 0261-4189 22 3122 10.1093/EMBOJ/CDG283 12805226 Ctbp/Bars: A Dual-Function Protein Involved in Transcription Co-Repression and Golgi Membrane Fission 2003 DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 D58 1068 10.1107/S0907444902006984 12037320 Crystallization and Preliminary X-Ray Diffraction Analysis of Brefeldin A-Adp Ribosylated Substrate (Bars) 2002 10.2210/pdb1hl3/pdb pdb_00001hl3 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.0 1 CCD SINGLE WAVELENGTH M x-ray 1 0.93300 1.0 ID14-2 ESRF 0.93300 SYNCHROTRON ESRF BEAMLINE ID14-2 39509.133 C-TERMINAL BINDING PROTEIN 3 RESIDUES 1-350 1 man polymer 801.971 PRO-ILE-ASP-LEU-SER-LYS-LYS PEPTIDE 1 syn polymer 663.425 NICOTINAMIDE-ADENINE-DINUCLEOTIDE 1 syn non-polymer 18.015 water 36 nat water CTBP3 no no MGHHHHHHMSGVRPPIMNGPMHPRPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAVGALMYHTITLTR EDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRTTWLHQALREGTRVQSVEQIR EVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGIERALGLQRVSTLQDLLFHSDCVTLHCGLNEHN HHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQA SIEMREEAAREIRRAITGRIPDSLKNCVNKDHLTAATH MGHHHHHHMSGVRPPIMNGPMHPRPLVALLDGRDCTVEMPILKDVATVAFCDAQSTQEIHEKVLNEAVGALMYHTITLTR EDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRTTWLHQALREGTRVQSVEQIR EVASGAARIRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGIERALGLQRVSTLQDLLFHSDCVTLHCGLNEHN HHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQA SIEMREEAAREIRRAITGRIPDSLKNCVNKDHLTAATH A polypeptide(L) no no PIDLSKK PIDLSKK B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n RAT sample 10116 BRAIN RATTUS NORVEGICUS 469008 ESCHERICHIA COLI BL21(DE3) PET11D-HIS 1 2.17 43.3 7.50 2.0 M AMMONIUM FORMATE, 100 MM HEPES, PH 7.5.CRYSTAL SOAKED IN 5MM PEPTIDE (PIDLSKK) chem_comp_atom chem_comp_bond database_2 pdbx_database_status pdbx_initial_refinement_model struct_site repository Initial release Database references Derived calculations Non-polymer description Other Source and taxonomy Structure summary Version format compliance Data collection Database references Derived calculations Other Refinement description 1 0 2003-06-19 1 1 2016-12-21 1 2 2023-12-13 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.status_code_sf _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id PDBE Y PDBE 2003-03-13 REL REL 1 A O HOH 2003 7.15 1 A O HOH 2007 7.23 NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HOH water 32630 SYNTHETIC CONSTRUCT sample POSSIBLLY NVOLVED IN CONTROLLING THE EQUILIBRIUM BETWEEN TUBULAR AND STACKED STRUCTURES IN THE GOLGI COMPLEX. PIDLSKK (B1-7) PEPTIDE BOUND TO CTBP/BARS HIS-TAG (MGHHHHHH), TRUNCATION AFTER RESIDUE 350 1HKU PDB ENTRY 1HKU PDB experimental model NAD 600 3 NAD NAD 600 A HOH 2001 4 HOH HOH 2001 A HOH 2002 4 HOH HOH 2002 A HOH 2003 4 HOH HOH 2003 A HOH 2004 4 HOH HOH 2004 A HOH 2005 4 HOH HOH 2005 A HOH 2006 4 HOH HOH 2006 A HOH 2007 4 HOH HOH 2007 A HOH 2008 4 HOH HOH 2008 A HOH 2009 4 HOH HOH 2009 A HOH 2010 4 HOH HOH 2010 A HOH 2011 4 HOH HOH 2011 A HOH 2012 4 HOH HOH 2012 A HOH 2013 4 HOH HOH 2013 A HOH 2014 4 HOH HOH 2014 A HOH 2015 4 HOH HOH 2015 A HOH 2016 4 HOH HOH 2016 A HOH 2017 4 HOH HOH 2017 A HOH 2018 4 HOH HOH 2018 A HOH 2019 4 HOH HOH 2019 A HOH 2020 4 HOH HOH 2020 A HOH 2021 4 HOH HOH 2021 A HOH 2022 4 HOH HOH 2022 A HOH 2023 4 HOH HOH 2023 A HOH 2024 4 HOH HOH 2024 A HOH 2025 4 HOH HOH 2025 A HOH 2026 4 HOH HOH 2026 A HOH 2027 4 HOH HOH 2027 A HOH 2028 4 HOH HOH 2028 A HOH 2029 4 HOH HOH 2029 A HOH 2030 4 HOH HOH 2030 A HOH 2031 4 HOH HOH 2031 A HOH 2032 4 HOH HOH 2032 A HOH 2033 4 HOH HOH 2033 A HOH 2034 4 HOH HOH 2034 A HOH 2035 4 HOH HOH 2035 A HOH 2036 4 HOH HOH 2036 A n 1 -7 A n 2 -6 A n 3 -5 A n 4 -4 A n 5 -3 A n 6 -2 A n 7 -1 A n 8 0 A n 9 1 A n 10 2 A n 11 3 A n 12 4 A n 13 5 A n 14 6 A n 15 7 A n 16 8 A n 17 9 A n 18 10 A n 19 11 A n 20 12 A n 21 13 A n 22 14 A PRO 15 n 23 PRO 15 A ARG 16 n 24 ARG 16 A PRO 17 n 25 PRO 17 A LEU 18 n 26 LEU 18 A VAL 19 n 27 VAL 19 A ALA 20 n 28 ALA 20 A LEU 21 n 29 LEU 21 A LEU 22 n 30 LEU 22 A ASP 23 n 31 ASP 23 A GLY 24 n 32 GLY 24 A ARG 25 n 33 ARG 25 A ASP 26 n 34 ASP 26 A CYS 27 n 35 CYS 27 A THR 28 n 36 THR 28 A VAL 29 n 37 VAL 29 A GLU 30 n 38 GLU 30 A MET 31 n 39 MET 31 A PRO 32 n 40 PRO 32 A ILE 33 n 41 ILE 33 A LEU 34 n 42 LEU 34 A LYS 35 n 43 LYS 35 A ASP 36 n 44 ASP 36 A VAL 37 n 45 VAL 37 A ALA 38 n 46 ALA 38 A THR 39 n 47 THR 39 A VAL 40 n 48 VAL 40 A ALA 41 n 49 ALA 41 A PHE 42 n 50 PHE 42 A CYS 43 n 51 CYS 43 A ASP 44 n 52 ASP 44 A ALA 45 n 53 ALA 45 A GLN 46 n 54 GLN 46 A SER 47 n 55 SER 47 A THR 48 n 56 THR 48 A GLN 49 n 57 GLN 49 A GLU 50 n 58 GLU 50 A ILE 51 n 59 ILE 51 A HIS 52 n 60 HIS 52 A GLU 53 n 61 GLU 53 A LYS 54 n 62 LYS 54 A VAL 55 n 63 VAL 55 A LEU 56 n 64 LEU 56 A ASN 57 n 65 ASN 57 A GLU 58 n 66 GLU 58 A ALA 59 n 67 ALA 59 A VAL 60 n 68 VAL 60 A GLY 61 n 69 GLY 61 A ALA 62 n 70 ALA 62 A LEU 63 n 71 LEU 63 A MET 64 n 72 MET 64 A TYR 65 n 73 TYR 65 A HIS 66 n 74 HIS 66 A THR 67 n 75 THR 67 A ILE 68 n 76 ILE 68 A THR 69 n 77 THR 69 A LEU 70 n 78 LEU 70 A THR 71 n 79 THR 71 A ARG 72 n 80 ARG 72 A GLU 73 n 81 GLU 73 A ASP 74 n 82 ASP 74 A LEU 75 n 83 LEU 75 A GLU 76 n 84 GLU 76 A LYS 77 n 85 LYS 77 A PHE 78 n 86 PHE 78 A LYS 79 n 87 LYS 79 A ALA 80 n 88 ALA 80 A LEU 81 n 89 LEU 81 A ARG 82 n 90 ARG 82 A ILE 83 n 91 ILE 83 A ILE 84 n 92 ILE 84 A VAL 85 n 93 VAL 85 A ARG 86 n 94 ARG 86 A ILE 87 n 95 ILE 87 A GLY 88 n 96 GLY 88 A SER 89 n 97 SER 89 A GLY 90 n 98 GLY 90 A PHE 91 n 99 PHE 91 A ASP 92 n 100 ASP 92 A ASN 93 n 101 ASN 93 A ILE 94 n 102 ILE 94 A ASP 95 n 103 ASP 95 A ILE 96 n 104 ILE 96 A LYS 97 n 105 LYS 97 A SER 98 n 106 SER 98 A ALA 99 n 107 ALA 99 A GLY 100 n 108 GLY 100 A ASP 101 n 109 ASP 101 A LEU 102 n 110 LEU 102 A GLY 103 n 111 GLY 103 A ILE 104 n 112 ILE 104 A ALA 105 n 113 ALA 105 A VAL 106 n 114 VAL 106 A CYS 107 n 115 CYS 107 A ASN 108 n 116 ASN 108 A VAL 109 n 117 VAL 109 A PRO 110 n 118 PRO 110 A ALA 111 n 119 ALA 111 A ALA 112 n 120 ALA 112 A SER 113 n 121 SER 113 A VAL 114 n 122 VAL 114 A GLU 115 n 123 GLU 115 A GLU 116 n 124 GLU 116 A THR 117 n 125 THR 117 A ALA 118 n 126 ALA 118 A ASP 119 n 127 ASP 119 A SER 120 n 128 SER 120 A THR 121 n 129 THR 121 A LEU 122 n 130 LEU 122 A CYS 123 n 131 CYS 123 A HIS 124 n 132 HIS 124 A ILE 125 n 133 ILE 125 A LEU 126 n 134 LEU 126 A ASN 127 n 135 ASN 127 A LEU 128 n 136 LEU 128 A TYR 129 n 137 TYR 129 A ARG 130 n 138 ARG 130 A ARG 131 n 139 ARG 131 A THR 132 n 140 THR 132 A THR 133 n 141 THR 133 A TRP 134 n 142 TRP 134 A LEU 135 n 143 LEU 135 A HIS 136 n 144 HIS 136 A GLN 137 n 145 GLN 137 A ALA 138 n 146 ALA 138 A LEU 139 n 147 LEU 139 A ARG 140 n 148 ARG 140 A GLU 141 n 149 GLU 141 A GLY 142 n 150 GLY 142 A THR 143 n 151 THR 143 A ARG 144 n 152 ARG 144 A VAL 145 n 153 VAL 145 A GLN 146 n 154 GLN 146 A SER 147 n 155 SER 147 A VAL 148 n 156 VAL 148 A GLU 149 n 157 GLU 149 A GLN 150 n 158 GLN 150 A ILE 151 n 159 ILE 151 A ARG 152 n 160 ARG 152 A GLU 153 n 161 GLU 153 A VAL 154 n 162 VAL 154 A ALA 155 n 163 ALA 155 A SER 156 n 164 SER 156 A GLY 157 n 165 GLY 157 A ALA 158 n 166 ALA 158 A ALA 159 n 167 ALA 159 A ARG 160 n 168 ARG 160 A ILE 161 n 169 ILE 161 A ARG 162 n 170 ARG 162 A GLY 163 n 171 GLY 163 A GLU 164 n 172 GLU 164 A THR 165 n 173 THR 165 A LEU 166 n 174 LEU 166 A GLY 167 n 175 GLY 167 A ILE 168 n 176 ILE 168 A ILE 169 n 177 ILE 169 A GLY 170 n 178 GLY 170 A LEU 171 n 179 LEU 171 A GLY 172 n 180 GLY 172 A ARG 173 n 181 ARG 173 A VAL 174 n 182 VAL 174 A GLY 175 n 183 GLY 175 A GLN 176 n 184 GLN 176 A ALA 177 n 185 ALA 177 A VAL 178 n 186 VAL 178 A ALA 179 n 187 ALA 179 A LEU 180 n 188 LEU 180 A ARG 181 n 189 ARG 181 A ALA 182 n 190 ALA 182 A LYS 183 n 191 LYS 183 A ALA 184 n 192 ALA 184 A PHE 185 n 193 PHE 185 A GLY 186 n 194 GLY 186 A PHE 187 n 195 PHE 187 A ASN 188 n 196 ASN 188 A VAL 189 n 197 VAL 189 A LEU 190 n 198 LEU 190 A PHE 191 n 199 PHE 191 A TYR 192 n 200 TYR 192 A ASP 193 n 201 ASP 193 A PRO 194 n 202 PRO 194 A TYR 195 n 203 TYR 195 A LEU 196 n 204 LEU 196 A SER 197 n 205 SER 197 A ASP 198 n 206 ASP 198 A GLY 199 n 207 GLY 199 A ILE 200 n 208 ILE 200 A GLU 201 n 209 GLU 201 A ARG 202 n 210 ARG 202 A ALA 203 n 211 ALA 203 A LEU 204 n 212 LEU 204 A GLY 205 n 213 GLY 205 A LEU 206 n 214 LEU 206 A GLN 207 n 215 GLN 207 A ARG 208 n 216 ARG 208 A VAL 209 n 217 VAL 209 A SER 210 n 218 SER 210 A THR 211 n 219 THR 211 A LEU 212 n 220 LEU 212 A GLN 213 n 221 GLN 213 A ASP 214 n 222 ASP 214 A LEU 215 n 223 LEU 215 A LEU 216 n 224 LEU 216 A PHE 217 n 225 PHE 217 A HIS 218 n 226 HIS 218 A SER 219 n 227 SER 219 A ASP 220 n 228 ASP 220 A CYS 221 n 229 CYS 221 A VAL 222 n 230 VAL 222 A THR 223 n 231 THR 223 A LEU 224 n 232 LEU 224 A HIS 225 n 233 HIS 225 A CYS 226 n 234 CYS 226 A GLY 227 n 235 GLY 227 A LEU 228 n 236 LEU 228 A ASN 229 n 237 ASN 229 A GLU 230 n 238 GLU 230 A HIS 231 n 239 HIS 231 A ASN 232 n 240 ASN 232 A HIS 233 n 241 HIS 233 A HIS 234 n 242 HIS 234 A LEU 235 n 243 LEU 235 A ILE 236 n 244 ILE 236 A ASN 237 n 245 ASN 237 A ASP 238 n 246 ASP 238 A PHE 239 n 247 PHE 239 A THR 240 n 248 THR 240 A VAL 241 n 249 VAL 241 A LYS 242 n 250 LYS 242 A GLN 243 n 251 GLN 243 A MET 244 n 252 MET 244 A ARG 245 n 253 ARG 245 A GLN 246 n 254 GLN 246 A GLY 247 n 255 GLY 247 A ALA 248 n 256 ALA 248 A PHE 249 n 257 PHE 249 A LEU 250 n 258 LEU 250 A VAL 251 n 259 VAL 251 A ASN 252 n 260 ASN 252 A THR 253 n 261 THR 253 A ALA 254 n 262 ALA 254 A ARG 255 n 263 ARG 255 A GLY 256 n 264 GLY 256 A GLY 257 n 265 GLY 257 A LEU 258 n 266 LEU 258 A VAL 259 n 267 VAL 259 A ASP 260 n 268 ASP 260 A GLU 261 n 269 GLU 261 A LYS 262 n 270 LYS 262 A ALA 263 n 271 ALA 263 A LEU 264 n 272 LEU 264 A ALA 265 n 273 ALA 265 A GLN 266 n 274 GLN 266 A ALA 267 n 275 ALA 267 A LEU 268 n 276 LEU 268 A LYS 269 n 277 LYS 269 A GLU 270 n 278 GLU 270 A GLY 271 n 279 GLY 271 A ARG 272 n 280 ARG 272 A ILE 273 n 281 ILE 273 A ARG 274 n 282 ARG 274 A GLY 275 n 283 GLY 275 A ALA 276 n 284 ALA 276 A ALA 277 n 285 ALA 277 A LEU 278 n 286 LEU 278 A ASP 279 n 287 ASP 279 A VAL 280 n 288 VAL 280 A HIS 281 n 289 HIS 281 A GLU 282 n 290 GLU 282 A SER 283 n 291 SER 283 A GLU 284 n 292 GLU 284 A PRO 285 n 293 PRO 285 A PHE 286 n 294 PHE 286 A SER 287 n 295 SER 287 A PHE 288 n 296 PHE 288 A SER 289 n 297 SER 289 A GLN 290 n 298 GLN 290 A GLY 291 n 299 GLY 291 A PRO 292 n 300 PRO 292 A LEU 293 n 301 LEU 293 A LYS 294 n 302 LYS 294 A ASP 295 n 303 ASP 295 A ALA 296 n 304 ALA 296 A PRO 297 n 305 PRO 297 A ASN 298 n 306 ASN 298 A LEU 299 n 307 LEU 299 A ILE 300 n 308 ILE 300 A CYS 301 n 309 CYS 301 A THR 302 n 310 THR 302 A PRO 303 n 311 PRO 303 A HIS 304 n 312 HIS 304 A ALA 305 n 313 ALA 305 A ALA 306 n 314 ALA 306 A TRP 307 n 315 TRP 307 A TYR 308 n 316 TYR 308 A SER 309 n 317 SER 309 A GLU 310 n 318 GLU 310 A GLN 311 n 319 GLN 311 A ALA 312 n 320 ALA 312 A SER 313 n 321 SER 313 A ILE 314 n 322 ILE 314 A GLU 315 n 323 GLU 315 A MET 316 n 324 MET 316 A ARG 317 n 325 ARG 317 A GLU 318 n 326 GLU 318 A GLU 319 n 327 GLU 319 A ALA 320 n 328 ALA 320 A ALA 321 n 329 ALA 321 A ARG 322 n 330 ARG 322 A GLU 323 n 331 GLU 323 A ILE 324 n 332 ILE 324 A ARG 325 n 333 ARG 325 A ARG 326 n 334 ARG 326 A ALA 327 n 335 ALA 327 A ILE 328 n 336 ILE 328 A THR 329 n 337 THR 329 A GLY 330 n 338 GLY 330 A ARG 331 n 339 ARG 331 A ILE 332 n 340 ILE 332 A PRO 333 n 341 PRO 333 A ASP 334 n 342 ASP 334 A SER 335 n 343 SER 335 A LEU 336 n 344 LEU 336 A LYS 337 n 345 LYS 337 A ASN 338 n 346 ASN 338 A CYS 339 n 347 CYS 339 A VAL 340 n 348 VAL 340 A ASN 341 n 349 ASN 341 A LYS 342 n 350 LYS 342 A ASP 343 n 351 ASP 343 A HIS 344 n 352 HIS 344 A LEU 345 n 353 LEU 345 A THR 346 n 354 THR 346 A n 355 347 A n 356 348 A n 357 349 A n 358 350 A PRO 1 n 1 PRO 1 B ILE 2 n 2 ILE 2 B ASP 3 n 3 ASP 3 B LEU 4 n 4 LEU 4 B SER 5 n 5 SER 5 B LYS 6 n 6 LYS 6 B LYS 7 n 7 LYS 7 B author_and_software_defined_assembly PQS 4 tetrameric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.5000000000 -0.8660254038 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 10_665 -y+1,-x+1,-z+1/3 crystal symmetry operation 42.4055000000 73.4484805204 53.2396666667 A N CYS 107 A N CYS 115 A O ILE 84 A O ILE 92 A N VAL 85 A N VAL 93 A O ALA 62 A O ALA 70 A N GLY 61 A N GLY 69 A O LEU 18 A O LEU 26 A N VAL 19 A N VAL 27 A O THR 39 A O THR 47 A N PHE 42 A N PHE 50 B O ILE 2 B O ILE 2 A O GLN 207 A O GLN 215 A N PHE 191 A N PHE 199 A N LEU 190 A N LEU 198 A O LEU 166 A O LEU 174 A N GLY 167 A N GLY 175 A O CYS 221 A O CYS 229 A N VAL 222 A N VAL 230 A O PHE 249 A O PHE 257 A N LEU 250 A N LEU 258 A O GLY 275 A O GLY 283 A N LEU 278 A N LEU 286 A O ILE 300 A O ILE 308 1 A CA THR 346 A CA THR 354 1 Y 1 A C THR 346 A C THR 354 1 Y 1 A O THR 346 A O THR 354 1 Y 1 A CB THR 346 A CB THR 354 1 Y 1 A OG1 THR 346 A OG1 THR 354 1 Y 1 A CG2 THR 346 A CG2 THR 354 1 Y 1 A MET -7 A MET 1 1 Y 1 A GLY -6 A GLY 2 1 Y 1 A HIS -5 A HIS 3 1 Y 1 A HIS -4 A HIS 4 1 Y 1 A HIS -3 A HIS 5 1 Y 1 A HIS -2 A HIS 6 1 Y 1 A HIS -1 A HIS 7 1 Y 1 A HIS 0 A HIS 8 1 Y 1 A MET 1 A MET 9 1 Y 1 A SER 2 A SER 10 1 Y 1 A GLY 3 A GLY 11 1 Y 1 A VAL 4 A VAL 12 1 Y 1 A ARG 5 A ARG 13 1 Y 1 A PRO 6 A PRO 14 1 Y 1 A PRO 7 A PRO 15 1 Y 1 A ILE 8 A ILE 16 1 Y 1 A MET 9 A MET 17 1 Y 1 A ASN 10 A ASN 18 1 Y 1 A GLY 11 A GLY 19 1 Y 1 A PRO 12 A PRO 20 1 Y 1 A MET 13 A MET 21 1 Y 1 A HIS 14 A HIS 22 1 Y 1 A ALA 347 A ALA 355 1 Y 1 A ALA 348 A ALA 356 1 Y 1 A THR 349 A THR 357 1 Y 1 A HIS 350 A HIS 358 1 Y 1 A ARG 144 0.104 SIDE CHAIN 1 A PRO 17 -49.32 165.87 1 A LEU 22 -42.52 -76.38 1 A ARG 25 -152.84 32.85 1 A PRO 32 -54.41 -9.37 1 A GLU 58 -118.42 72.75 1 A TYR 65 -94.40 -118.12 1 A THR 67 -65.07 29.75 1 A GLN 146 -98.23 -76.57 1 A SER 156 -55.02 99.07 1 A ARG 162 -54.52 109.75 1 A LEU 171 -102.88 59.19 1 A ASP 193 -154.79 86.76 1 A HIS 225 -142.86 34.52 1 A ASN 229 -158.45 -158.08 1 A ALA 254 -110.75 -88.00 1 A LEU 293 -76.17 21.26 1 A ASN 298 38.89 75.59 1 A PRO 303 -68.49 51.63 1 A SER 309 177.59 127.47 1 A ASP 334 -55.81 0.72 1 B LYS 6 -56.28 82.68 PROTEIN_REP.PARAM PROTEIN.TOP WATER_REP.PARAM WATER.TOP ION.PARAM ION.TOP NO DENSITY FOR THE HIS-TAG (MGHHHHHH),AND FOR RESIDUES MET A1- HIS A14 AND THR A346-HIS A350. ATOM OXT OF LEU A345 WAS CHANGED TO ATOM N OF THR A346 IN ORDER TO COMPLY WITH THE PDB FORMAT. THIS CHANGE MAKES NO DECISION ON THE DIRECTION IN WHICH THE CHAIN BRANCHES. 0.315 0.256 0.256 3.1 30.0 668 6060 10.0 90.8 RANDOM 1 2.0 FOURIER SYNTHESIS PDB ENTRY 1HKU ENGH & HUBER 3.1 30.0 36 2697 44 0 2617 0.004 1.2 3.100 30.000 1HL3 6482 0.12500 1 8.9000 5.000 97.7 0.46000 3.10 3.15 3.500 1 5.00 98.4 refinement CNS 1.0 data reduction DENZO data scaling SCALEPACK phasing CNS CtBP/BARS in ternary complex with NAD(H) and PIDLSKK peptide 1 N N 2 N N 3 N N 4 N N CHAIN A FORMS A DIMERIC COMPLEX, BUT SINCE IT IS INCOMPLEX WITH PEPTIDE CHAIN B, THESE RECORDS INDICATEA TETRAMER. A GLU 30 A GLU 38 HELX_P A LYS 35 A LYS 43 1 1 6 A HIS 52 A HIS 60 HELX_P A GLU 58 A GLU 66 1 2 7 A THR 71 A THR 79 HELX_P A GLU 76 A GLU 84 1 3 6 A ASP 95 A ASP 103 HELX_P A LEU 102 A LEU 110 1 4 8 A SER 113 A SER 121 HELX_P A ARG 130 A ARG 138 1 5 18 A ARG 131 A ARG 139 HELX_P A ARG 140 A ARG 148 1 6 10 A SER 147 A SER 155 HELX_P A ALA 155 A ALA 163 1 7 9 A GLY 172 A GLY 180 HELX_P A PHE 185 A PHE 193 1 8 14 A GLY 199 A GLY 207 HELX_P A GLY 205 A GLY 213 1 9 7 A THR 211 A THR 219 HELX_P A SER 219 A SER 227 1 10 9 A ASN 237 A ASN 245 HELX_P A GLN 243 A GLN 251 1 11 7 A ARG 255 A ARG 263 HELX_P A LEU 258 A LEU 266 5 12 4 A ASP 260 A ASP 268 HELX_P A GLY 271 A GLY 279 1 13 12 A GLY 291 A GLY 299 HELX_P A ALA 296 A ALA 304 5 14 6 A SER 309 A SER 317 HELX_P A GLY 330 A GLY 338 1 15 22 TRANCRIPTION CO-REPRESSOR TRANCRIPTION CO-REPRESSOR, TRANSCRIPTION CO-REPRESSION, ACYLTRANSFERASE, BREFELDIN A, NAD, GOLGI MEMBRANE, ACYL-COA A GLU 284 A GLU 292 1 A PRO 285 A PRO 293 -0.06 A ILE 332 A ILE 340 1 A PRO 333 A PRO 341 -0.10 CTBP1_RAT UNP 1 Q9Z2F5 1HL3 PDB 2 1HL3 1 350 1HL3 1 350 Q9Z2F5 A 1 9 358 1 7 1HL3 1 7 1HL3 B 2 1 7 1 expression tag MET -7 1HL3 A Q9Z2F5 UNP 1 1 expression tag GLY -6 1HL3 A Q9Z2F5 UNP 2 1 expression tag HIS -5 1HL3 A Q9Z2F5 UNP 3 1 expression tag HIS -4 1HL3 A Q9Z2F5 UNP 4 1 expression tag HIS -3 1HL3 A Q9Z2F5 UNP 5 1 expression tag HIS -2 1HL3 A Q9Z2F5 UNP 6 1 expression tag HIS -1 1HL3 A Q9Z2F5 UNP 7 1 expression tag HIS 0 1HL3 A Q9Z2F5 UNP 8 6 7 parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel parallel A ALA 105 A ALA 113 A ASN 108 A ASN 116 A ILE 83 A ILE 91 A ARG 86 A ARG 94 A GLY 61 A GLY 69 A MET 64 A MET 72 A LEU 18 A LEU 26 A LEU 21 A LEU 29 A THR 39 A THR 47 A PHE 42 A PHE 50 B ILE 2 B ILE 2 B ASP 3 B ASP 3 A GLN 207 A GLN 215 A ARG 208 A ARG 216 A LEU 190 A LEU 198 A TYR 192 A TYR 200 A LEU 166 A LEU 174 A ILE 169 A ILE 177 A CYS 221 A CYS 229 A LEU 224 A LEU 232 A PHE 249 A PHE 257 A ASN 252 A ASN 260 A GLY 275 A GLY 283 A LEU 278 A LEU 286 A LEU 299 A LEU 307 A CYS 301 A CYS 309 BINDING SITE FOR RESIDUE NAD A 600 A NAD 600 Software 22 A SER 89 A SER 97 22 1_555 A THR 117 A THR 125 22 1_555 A GLY 170 A GLY 178 22 1_555 A GLY 172 A GLY 180 22 1_555 A ARG 173 A ARG 181 22 1_555 A VAL 174 A VAL 182 22 1_555 A TYR 192 A TYR 200 22 1_555 A ASP 193 A ASP 201 22 1_555 A PRO 194 A PRO 202 22 1_555 A TYR 195 A TYR 203 22 1_555 A HIS 225 A HIS 233 22 1_555 A CYS 226 A CYS 234 22 1_555 A GLY 227 A GLY 235 22 1_555 A ASN 229 A ASN 237 22 1_555 A ASN 232 A ASN 240 22 1_555 A THR 253 A THR 261 22 1_555 A ALA 254 A ALA 262 22 1_555 A ARG 255 A ARG 263 22 1_555 A ASP 279 A ASP 287 22 1_555 A VAL 280 A VAL 288 22 1_555 A HIS 304 A HIS 312 22 1_555 A TRP 307 A TRP 315 22 1_555 181 P 64 2 2