1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Weir, H.M.
Kraulis, P.J.
Hill, C.S.
Raine, A.R.C.
Laue, E.D.
Thomas, J.O.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
EMBO J.
EMJODG
0897
0261-4189
12
1311
1319
8467791
Structure of the HMG box motif in the B-domain of HMG1.
1993
10.2210/pdb1hme/pdb
pdb_00001hme
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
8791.117
HIGH MOBILITY GROUP PROTEIN FRAGMENT-B
1
man
polymer
no
no
FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK
FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Norway rat
Rattus
sample
10116
Rattus norvegicus
database_2
pdbx_database_status
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Other
1
0
1994-05-31
1
1
2008-03-24
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
Y
BNL
1994-02-10
REL
1
BRUNGER
refinement
X-PLOR
2.1
PHE
1
n
1
PHE
1
A
LYS
2
n
2
LYS
2
A
ASP
3
n
3
ASP
3
A
PRO
4
n
4
PRO
4
A
ASN
5
n
5
ASN
5
A
ALA
6
n
6
ALA
6
A
PRO
7
n
7
PRO
7
A
LYS
8
n
8
LYS
8
A
ARG
9
n
9
ARG
9
A
PRO
10
n
10
PRO
10
A
PRO
11
n
11
PRO
11
A
SER
12
n
12
SER
12
A
ALA
13
n
13
ALA
13
A
PHE
14
n
14
PHE
14
A
PHE
15
n
15
PHE
15
A
LEU
16
n
16
LEU
16
A
PHE
17
n
17
PHE
17
A
CYS
18
n
18
CYS
18
A
SER
19
n
19
SER
19
A
GLU
20
n
20
GLU
20
A
TYR
21
n
21
TYR
21
A
ARG
22
n
22
ARG
22
A
PRO
23
n
23
PRO
23
A
LYS
24
n
24
LYS
24
A
ILE
25
n
25
ILE
25
A
LYS
26
n
26
LYS
26
A
GLY
27
n
27
GLY
27
A
GLU
28
n
28
GLU
28
A
HIS
29
n
29
HIS
29
A
PRO
30
n
30
PRO
30
A
GLY
31
n
31
GLY
31
A
LEU
32
n
32
LEU
32
A
SER
33
n
33
SER
33
A
ILE
34
n
34
ILE
34
A
GLY
35
n
35
GLY
35
A
ASP
36
n
36
ASP
36
A
VAL
37
n
37
VAL
37
A
ALA
38
n
38
ALA
38
A
LYS
39
n
39
LYS
39
A
LYS
40
n
40
LYS
40
A
LEU
41
n
41
LEU
41
A
GLY
42
n
42
GLY
42
A
GLU
43
n
43
GLU
43
A
MET
44
n
44
MET
44
A
TRP
45
n
45
TRP
45
A
ASN
46
n
46
ASN
46
A
ASN
47
n
47
ASN
47
A
THR
48
n
48
THR
48
A
ALA
49
n
49
ALA
49
A
ALA
50
n
50
ALA
50
A
ASP
51
n
51
ASP
51
A
ASP
52
n
52
ASP
52
A
LYS
53
n
53
LYS
53
A
GLN
54
n
54
GLN
54
A
PRO
55
n
55
PRO
55
A
TYR
56
n
56
TYR
56
A
GLU
57
n
57
GLU
57
A
LYS
58
n
58
LYS
58
A
LYS
59
n
59
LYS
59
A
ALA
60
n
60
ALA
60
A
ALA
61
n
61
ALA
61
A
LYS
62
n
62
LYS
62
A
LEU
63
n
63
LEU
63
A
LYS
64
n
64
LYS
64
A
GLU
65
n
65
GLU
65
A
LYS
66
n
66
LYS
66
A
TYR
67
n
67
TYR
67
A
GLU
68
n
68
GLU
68
A
LYS
69
n
69
LYS
69
A
ASP
70
n
70
ASP
70
A
ILE
71
n
71
ILE
71
A
ALA
72
n
72
ALA
72
A
ALA
73
n
73
ALA
73
A
TYR
74
n
74
TYR
74
A
ARG
75
n
75
ARG
75
A
ALA
76
n
76
ALA
76
A
LYS
77
n
77
LYS
77
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
-6.17
1.00
110.10
103.93
A
A
A
CG
CD1
NE1
TRP
TRP
TRP
45
45
45
N
1
9.65
1.10
130.40
140.05
A
A
A
NE1
CE2
CZ2
TRP
TRP
TRP
45
45
45
N
1
-7.36
1.00
107.30
99.94
A
A
A
NE1
CE2
CD2
TRP
TRP
TRP
45
45
45
N
1
A
A
CG
ND1
HIS
HIS
29
29
-0.126
0.015
1.369
1.243
N
1
A
A
CG
CD2
TRP
TRP
45
45
-0.120
0.017
1.432
1.312
N
1
A
LYS
2
-46.89
97.42
1
A
ALA
6
-39.77
101.44
1
A
PRO
7
-102.67
-157.88
1
A
PRO
11
-83.12
-150.46
1
A
PRO
30
-69.63
31.60
1
A
TYR
67
-54.66
-87.38
1
A
GLU
68
-39.06
-12.47
1
A
ARG
75
-105.34
-163.21
model building
X-PLOR
2.0
refinement
X-PLOR
2.0
phasing
X-PLOR
2.0
STRUCTURE OF THE HMG BOX MOTIF IN THE B-DOMAIN OF HMG1
1
Y
N
A
ALA
13
A
ALA
13
HELX_P
BENT ROUND H2
A
HIS
29
A
HIS
29
1
H1
17
A
ILE
34
A
ILE
34
HELX_P
A
THR
48
A
THR
48
1
H2
15
A
ALA
50
A
ALA
50
HELX_P
A
TYR
74
A
TYR
74
1
H3
25
DNA-BINDING
DNA-BINDING
HMG1_RAT
UNP
1
1
P63159
GKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPP
KGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAA
YRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE
88
164
1HME
1
77
P63159
A
1
1
77
1
P 1