1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Rejante, M.
Llinas, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C6 H13 N O2
131.173
6-AMINOHEXANOIC ACID
AMINOCAPROIC ACID
peptide linking
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
N
1
N
C
N
2
N
O
N
3
N
O
N
4
N
C
N
5
N
C
N
6
N
C
N
7
N
C
N
8
N
C
N
9
N
N
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
H
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
H
N
22
N
H
N
23
N
N
N
24
S
C
N
25
N
C
N
26
N
O
N
27
N
C
N
28
N
O
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
N
N
37
S
C
N
38
N
C
N
39
N
O
N
40
N
C
N
41
N
C
N
42
N
C
N
43
N
N
N
44
N
C
N
45
N
N
N
46
N
N
N
47
N
O
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
N
N
64
S
C
N
65
N
C
N
66
N
O
N
67
N
C
N
68
N
C
N
69
N
O
N
70
N
N
N
71
N
O
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
N
N
81
S
C
N
82
N
C
N
83
N
O
N
84
N
C
N
85
N
C
N
86
N
O
N
87
N
O
N
88
N
O
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
N
N
97
R
C
N
98
N
C
N
99
N
O
N
100
N
C
N
101
N
S
N
102
N
O
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
N
N
111
S
C
N
112
N
C
N
113
N
O
N
114
N
C
N
115
N
C
N
116
N
C
N
117
N
O
N
118
N
N
N
119
N
O
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
N
N
131
S
C
N
132
N
C
N
133
N
O
N
134
N
C
N
135
N
C
N
136
N
C
N
137
N
O
N
138
N
O
N
139
N
O
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
N
N
150
N
C
N
151
N
C
N
152
N
O
N
153
N
O
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
N
N
160
S
C
N
161
N
C
N
162
N
O
N
163
N
C
Y
164
N
C
Y
165
N
N
Y
166
N
C
Y
167
N
C
Y
168
N
N
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
N
N
181
S
C
N
182
N
C
N
183
N
O
N
184
S
C
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
N
N
203
S
C
N
204
N
C
N
205
N
O
N
206
N
C
N
207
N
C
N
208
N
C
N
209
N
C
N
210
N
O
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
N
N
225
S
C
N
226
N
C
N
227
N
O
N
228
N
C
N
229
N
C
N
230
N
C
N
231
N
C
N
232
N
N
N
233
N
O
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
N
N
250
S
C
N
251
N
C
N
252
N
O
N
253
N
C
N
254
N
C
N
255
N
S
N
256
N
C
N
257
N
O
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
N
N
270
S
C
N
271
N
C
N
272
N
O
N
273
N
C
Y
274
N
C
Y
275
N
C
Y
276
N
C
Y
277
N
C
Y
278
N
C
Y
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
N
N
293
S
C
N
294
N
C
N
295
N
O
N
296
N
C
N
297
N
C
N
298
N
C
N
299
N
O
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
N
N
310
S
C
N
311
N
C
N
312
N
O
N
313
N
C
N
314
N
O
N
315
N
O
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
N
N
324
S
C
N
325
N
C
N
326
N
O
N
327
R
C
N
328
N
O
N
329
N
C
N
330
N
O
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
N
N
341
S
C
N
342
N
C
N
343
N
O
N
344
N
C
Y
345
N
C
Y
346
N
C
Y
347
N
C
Y
348
N
N
Y
349
N
C
Y
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
N
354
N
O
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
N
N
368
S
C
N
369
N
C
N
370
N
O
N
371
N
C
Y
372
N
C
Y
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
N
378
N
O
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
doub
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
doub
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
doub
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
doub
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
doub
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
doub
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
doub
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
Y
161
N
sing
Y
162
N
doub
Y
163
N
doub
N
164
N
sing
Y
165
N
sing
N
166
N
sing
Y
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
doub
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
doub
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
Y
267
N
doub
Y
268
N
sing
Y
269
N
sing
N
270
N
sing
Y
271
N
doub
N
272
N
sing
Y
273
N
doub
N
274
N
sing
Y
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
doub
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
doub
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
Y
336
N
doub
Y
337
N
sing
Y
338
N
sing
N
339
N
sing
Y
340
N
doub
Y
341
N
sing
Y
342
N
sing
N
343
N
sing
Y
344
N
sing
Y
345
N
doub
N
346
N
sing
Y
347
N
doub
N
348
N
sing
Y
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
doub
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
Y
364
N
doub
Y
365
N
sing
Y
366
N
sing
N
367
N
sing
Y
368
N
doub
N
369
N
sing
Y
370
N
doub
N
371
N
sing
Y
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
IX
Eur.J.Biochem.
EJBCAI
0262
0014-2956
221
939
949
10.1111/j.1432-1033.1994.tb18809.x
8181476
Solution structure of the epsilon-aminohexanoic acid complex of human plasminogen kringle 1.
1994
IX
Eur.J.Biochem.
EJBCAI
0262
0014-2956
221
927
1H-NMR Assignments and Secondary Structure of Human Plasminogen Kringle 1
1994
10.2210/pdb1hpk/pdb
pdb_00001hpk
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
CONTAINS THE 6-AMINOHEXANOIC ACID LIGAND
9076.989
PLASMINOGEN
3.4.21.7
KRINGLE 1 DOMAIN
1
nat
polymer
131.173
6-AMINOHEXANOIC ACID
1
syn
non-polymer
no
no
CKTGNGKNYRGTMSKTKNGITCQKWSSTSPHRPRFSPATHPSEGLEENYCRNPDNDPQGPWCYTTDPEKRYDYCDILEC
CKTGNGKNYRGTMSKTKNGITCQKWSSTSPHRPRFSPATHPSEGLEENYCRNPDNDPQGPWCYTTDPEKRYDYCDILEC
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
sample
9606
BLOOD
Homo sapiens
BLOOD PLASMA
pdbx_database_status
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conf
struct_conf_type
atom_site
chem_comp_atom
chem_comp_bond
database_2
struct_site
repository
Initial release
Version format compliance
Version format compliance
Derived calculations
Other
Atomic model
Data collection
Database references
Derived calculations
1
0
1997-03-12
1
1
2008-03-24
1
2
2011-07-13
1
3
2017-11-29
2
0
2023-11-15
_pdbx_database_status.process_site
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_atom_id
_atom_site.label_atom_id
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1996-08-14
REL
REL
ACA
6-AMINOHEXANOIC ACID
MINIMIZED AVERAGE
1
5.3
310
K
BRUNGER
refinement
X-PLOR
3.1
500
Bruker
AM-500
ACA
80
2
ACA
ACA
80
A
CYS
1
n
1
CYS
1
A
LYS
2
n
2
LYS
2
A
THR
3
n
3
THR
3
A
GLY
4
n
4
GLY
4
A
ASN
5
n
5
ASN
5
A
GLY
6
n
6
GLY
6
A
LYS
7
n
7
LYS
7
A
ASN
8
n
8
ASN
8
A
TYR
9
n
9
TYR
9
A
ARG
10
n
10
ARG
10
A
GLY
11
n
11
GLY
11
A
THR
12
n
12
THR
12
A
MET
13
n
13
MET
13
A
SER
14
n
14
SER
14
A
LYS
15
n
15
LYS
15
A
THR
16
n
16
THR
16
A
LYS
17
n
17
LYS
17
A
ASN
18
n
18
ASN
18
A
GLY
19
n
19
GLY
19
A
ILE
20
n
20
ILE
20
A
THR
21
n
21
THR
21
A
CYS
22
n
22
CYS
22
A
GLN
23
n
23
GLN
23
A
LYS
24
n
24
LYS
24
A
TRP
25
n
25
TRP
25
A
SER
26
n
26
SER
26
A
SER
27
n
27
SER
27
A
THR
28
n
28
THR
28
A
SER
29
n
29
SER
29
A
PRO
30
n
30
PRO
30
A
HIS
31
n
31
HIS
31
A
ARG
32
n
32
ARG
32
A
PRO
33
n
33
PRO
33
A
ARG
34
n
34
ARG
34
A
PHE
35
n
35
PHE
35
A
SER
36
n
36
SER
36
A
PRO
37
n
37
PRO
37
A
ALA
38
n
38
ALA
38
A
THR
39
n
39
THR
39
A
HIS
40
n
40
HIS
40
A
PRO
41
n
41
PRO
41
A
SER
42
n
42
SER
42
A
GLU
43
n
43
GLU
43
A
GLY
44
n
44
GLY
44
A
LEU
45
n
45
LEU
45
A
GLU
46
n
46
GLU
46
A
GLU
47
n
47
GLU
47
A
ASN
48
n
48
ASN
48
A
TYR
49
n
49
TYR
49
A
CYS
50
n
50
CYS
50
A
ARG
51
n
51
ARG
51
A
ASN
52
n
52
ASN
52
A
PRO
53
n
53
PRO
53
A
ASP
54
n
54
ASP
54
A
ASN
55
n
55
ASN
55
A
ASP
56
n
56
ASP
56
A
PRO
57
n
57
PRO
57
A
GLN
58
n
58
GLN
58
A
GLY
59
n
59
GLY
59
A
PRO
60
n
60
PRO
60
A
TRP
61
n
61
TRP
61
A
CYS
62
n
62
CYS
62
A
TYR
63
n
63
TYR
63
A
THR
64
n
64
THR
64
A
THR
65
n
65
THR
65
A
ASP
66
n
66
ASP
66
A
PRO
67
n
67
PRO
67
A
GLU
68
n
68
GLU
68
A
LYS
69
n
69
LYS
69
A
ARG
70
n
70
ARG
70
A
TYR
71
n
71
TYR
71
A
ASP
72
n
72
ASP
72
A
TYR
73
n
73
TYR
73
A
CYS
74
n
74
CYS
74
A
ASP
75
n
75
ASP
75
A
ILE
76
n
76
ILE
76
A
LEU
77
n
77
LEU
77
A
GLU
78
n
78
GLU
78
A
CYS
79
n
79
CYS
79
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
THR
16
A
N
THR
16
A
O
ILE
20
A
O
ILE
20
A
N
CYS
62
A
N
CYS
62
A
O
ASP
72
A
O
ASP
72
1
A
ARG
10
0.285
SIDE CHAIN
1
A
ARG
32
0.307
SIDE CHAIN
1
A
ARG
34
0.242
SIDE CHAIN
1
A
ARG
51
0.316
SIDE CHAIN
1
A
ARG
70
0.222
SIDE CHAIN
1
5.70
0.90
109.00
114.70
A
A
A
CD1
NE1
CE2
TRP
TRP
TRP
25
25
25
N
1
5.16
0.80
106.30
111.46
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
61
61
61
N
1
8.20
1.10
130.40
138.60
A
A
A
NE1
CE2
CZ2
TRP
TRP
TRP
61
61
61
N
1
-6.84
1.00
107.30
100.46
A
A
A
NE1
CE2
CD2
TRP
TRP
TRP
61
61
61
N
1
A
A
CG
ND1
HIS
HIS
31
31
-0.125
0.015
1.369
1.244
N
1
A
A
CG
ND1
HIS
HIS
40
40
-0.115
0.015
1.369
1.254
N
1
A
A
CG
CD2
TRP
TRP
61
61
-0.108
0.017
1.432
1.324
N
1
A
LYS
2
-102.25
79.69
1
A
THR
3
-78.66
38.38
1
A
LYS
7
-153.80
-50.22
1
A
ARG
10
-142.87
-55.74
1
A
MET
13
-44.93
-75.27
1
A
SER
14
178.56
59.36
1
A
LYS
17
-20.20
-47.08
1
A
THR
21
-37.67
104.48
1
A
CYS
22
-61.24
-156.24
1
A
GLN
23
-114.42
-169.11
1
A
SER
26
-79.34
-81.88
1
A
SER
27
172.23
170.37
1
A
PRO
30
-67.92
-70.49
1
A
HIS
31
176.96
116.01
1
A
ARG
32
162.31
131.85
1
A
PRO
33
-61.03
-162.69
1
A
SER
36
156.79
-6.03
1
A
THR
39
-78.70
22.81
1
A
SER
42
-141.85
-149.35
1
A
GLU
43
-177.07
49.55
1
A
GLU
47
45.94
-75.33
1
A
ARG
51
-142.58
-150.43
1
A
ASP
54
-105.46
-87.45
1
A
ASN
55
-177.22
73.40
1
A
CYS
62
-177.26
135.87
1
A
THR
65
-52.00
12.38
1
A
PRO
67
-57.30
-76.88
1
A
GLU
68
-33.90
-31.02
1
A
ASP
72
152.80
-177.55
1
A
TYR
73
-74.67
-160.36
1
A
GLU
78
-53.02
-168.18
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
phasing
X-PLOR
3.1
SOLUTION NMR STRUCTURE OF THE HUMAN PLASMINOGEN KRINGLE 1 DOMAIN COMPLEXED WITH 6-AMINOHEXANOIC ACID AT PH 5.3, 310K, DERIVED FROM RANDOMLY GENERATED STRUCTURES USING SIMULATED ANNEALING, MINIMIZED AVERAGE STRUCTURE
1
Y
N
2
N
N
A
GLY
11
A
GLY
11
HELX_P
A
MET
13
A
MET
13
5
1
3
disulf
2.019
A
CYS
1
A
SG
CYS
1
1_555
A
CYS
79
A
SG
CYS
79
1_555
disulf
2.021
A
CYS
22
A
SG
CYS
22
1_555
A
CYS
62
A
SG
CYS
62
1_555
disulf
2.012
A
CYS
50
A
SG
CYS
50
1_555
A
CYS
74
A
SG
CYS
74
1_555
SERINE PROTEASE
SERINE PROTEASE, FIBRINOLYTIC ENZYME, LYSINE-BINDING DOMAIN
PLMN_HUMAN
UNP
1
1
P00747
MEHKEVVLLLLLFLKSGQGEPLDDYVNTQGASLFSVTKKQLGAGSIEECAAKCEEDEEFTCRAFQYHSKEQQCVIMAENR
KSSIIIRMRDVVLFEKKVYLSECKTGNGKNYRGTMSKTKNGITCQKWSSTSPHRPRFSPATHPSEGLEENYCRNPDNDPQ
GPWCYTTDPEKRYDYCDILECEEECMHCSGENYDGKISKTMSGLECQAWDSQSPHAHGYIPSKFPNKNLKKNYCRNPDRE
LRPWCFTTDPNKRWELCDIPRCTTPPPSSGPTYQCLKGTGENYRGNVAVTVSGHTCQHWSAQTPHTHNRTPENFPCKNLD
ENYCRNPDGKRAPWCHTTNSQVRWEYCKIPSCDSSPVSTEQLAPTAPPELTPVVQDCYHGDGQSYRGTSSTTTTGKKCQS
WSSMTPHRHQKTPENYPNAGLTMNYCRNPDADKGPWCFTTDPSVRWEYCNLKKCSGTEASVVAPPPVVLLPDVETPSEED
CMFGNGKGYRGKRATTVTGTPCQDWAAQEPHRHSIFTPETNPRAGLEKNYCRNPDGDVGGPWCYTTNPRKLYDYCDVPQC
AAPSFDCGKPQVEPKKCPGRVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAH
QEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQ
LPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFV
TWIEGVMRNN
103
181
1HPK
1
79
P00747
A
1
1
79
2
2
anti-parallel
anti-parallel
A
SER
14
A
SER
14
A
THR
16
A
THR
16
A
ILE
20
A
ILE
20
A
CYS
22
A
CYS
22
A
PRO
60
A
PRO
60
A
TYR
63
A
TYR
63
A
TYR
71
A
TYR
71
A
CYS
74
A
CYS
74
THESE RESIDUES COMPRISE THE 6-AMINOHEXANOIC ACID BINDING SITE AND, QUITE LIKELY, THE PHYSIOLOGICAL LIGAND (FIBRIN) BINDING SITE AS WELL.
Unknown
10
BINDING SITE FOR RESIDUE ACA A 80
A
ACA
80
Software
5
A
PRO
33
A
PRO
33
10
1_555
A
ARG
34
A
ARG
34
10
1_555
A
PHE
35
A
PHE
35
10
1_555
A
ASP
54
A
ASP
54
10
1_555
A
ASP
56
A
ASP
56
10
1_555
A
TRP
61
A
TRP
61
10
1_555
A
TYR
63
A
TYR
63
10
1_555
A
ARG
70
A
ARG
70
10
1_555
A
TYR
71
A
TYR
71
10
1_555
A
TYR
73
A
TYR
73
10
1_555
A
PRO
33
A
PRO
33
5
1_555
A
ASP
54
A
ASP
54
5
1_555
A
ASP
56
A
ASP
56
5
1_555
A
TRP
61
A
TRP
61
5
1_555
A
TYR
63
A
TYR
63
5
1_555
1
P 1